7AR7
Cryo-em structure of arabidopsis thaliana complex-i (open conformation)
PDB DOI: 10.2210/pdb7ar7/pdb
Classification: ELECTRON TRANSPORT Organism(s): Arabidopsis Thaliana
Deposited: 2020-10-23 Deposition Author(s): Klusch, N. , Kuelbrandt, W.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.72 Å
Cryo-em structure of arabidopsis thaliana complex-i (open conformation)
Primary Citation of Related Structures: 7AR7
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 | A | 58 | Arabidopsis Thaliana | LVWLEAMLPLGIIGGMLCIMGNSQYYIHKAYHGRPKHIGHDEWDVAMERRDKKVVEKA |
| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 | J | 51 | Arabidopsis Thaliana | GITYKGVTVHTPKTWHTVTGKGLCAVMWFWILYRAKQDGPVVMGWRHPWDG |
| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-A | K | 47 | Arabidopsis Thaliana | PLGTTGEFFRRRDEWRKHPMLSNQMRHALPGIGIGVGAFCVYLVGEQ |
| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial | L | 46 | Arabidopsis Thaliana | YEALAWLSGGLGFFVGLGLLAVLNDKASKVPFTPRVYPYDNLRVEL |
| AT2G31490 protein | M | 67 | Arabidopsis Thaliana | METNKNKFIEDWGSARENLEHNFRWTRRNFALIGIFGIALPIIVYKGIVKDFHMQDEDAGRPHRKFL |
| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 | N | 109 | Arabidopsis Thaliana | AAYFARRAAQKERVRILYRRALKDTLNWAVHRHIFYRDASDLREKFNVNQDVEDVDRIDKLIAHGEAEYNKWRHPDPYIVPWAPGGSKFCRNPTPPAGIEIVYNYGLED |
| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B | P | 93 | Arabidopsis Thaliana | GRKKGLPEFEESAPDGFDPENPYKDPVAMVEMREHIVREKWIQIEKAKILREKVKWCYRVEGVNHYQKCRHLVQQYLDSTRGVGWGKDHRPIS |
| Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 | Q | 63 | Arabidopsis Thaliana | GATLVGVDKFGNKYYQKLGDTQYGRHRWVEYASKDRYNASQVPAEWHGWLHFITDHTGDELLS |
| B14.5a | R | 10 | Arabidopsis Thaliana | PPIRRYVLTK |
| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 | S | 93 | Arabidopsis Thaliana | AWRGSISKSMKELRILLCQSSPASAPTRTFVEKNYKDLKSLNPKLPILIRECSGVQPQMWARYDMGVERCVNLDGLTEPQILKALENLVKSGA |
| Acyl carrier protein 1, mitochondrial | T | 84 | Arabidopsis Thaliana | DDHLSREAVVDRVLDVVKSFPKVDPSKVTPEVHFQNDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIEYVYNHPMS |
| At2g46540/F11C10.23 | B | 40 | Arabidopsis Thaliana | PVMEKLRMFVAQEPVVAASCLIGGVGLFLPAVVRPILDSL |
| unknown | U | 30 | Arabidopsis Thaliana | XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
| Uncharacterized protein At2g27730, mitochondrial | V | 30 | Arabidopsis Thaliana | PKVSEDKNRNYAVVAGVVAIVGSIGWYLKA |
| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 | W | 133 | Arabidopsis Thaliana | MAAPFALRKIGVPPNSANLTEARRRVFDFFRAACRSIPTIMDIYNLQDVVAPSQLRYAISAQIRNNAHITDPKVIDLLIFKGMEELTDIVDHAKQRHHIIGQYVVGEGLVQNTGNKDQGKTDFLKNFYTSNYF |
| Gamma carbonic anhydrase-like 2, mitochondrial | X | 214 | Arabidopsis Thaliana | PKSQVTPSPDRVKWDYRGQRQIIPLGQWLPKVAVDAYVAPNVVLAGQVTVWDGSSVWNGAVLRGDLNKITVGFCSNVQERCVVHAAWSSPTGLPAQTLIDRYVTVGAYSLLRSCTIEPECIIGQHSILMEGSLVETRSILEAGSVLPPGRRIPSGELWGGNPARFIRTLTNEETLEIPKLAVAINHLSGDYFSEFLPYSTIYLEVEKFKKSLGI |
| Gamma carbonic anhydrase 1, mitochondrial | Z | 233 | Arabidopsis Thaliana | GTLGRAFYSVGFWIRETGQALDRLGCRLQGKNYFREQLSRHRTLMNVFDKAPIVDKEAFVAPSASVIGDVHIGRGSSIWYGCVLRGDVNTVSVGSGTNIQDNSLVHVAKSNLSGKVHPTIIGDNVTIGHSAVLHGCTVEDETFIGMGATLLDGVVVEKHGMVAAGALVRQNTRIPSGEVWGGNPARFLRKLTDEEIAFISQSATNYSNLAQAHAAENAKPLNVIEFEKVLRKK |
| NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 | C | 185 | Arabidopsis Thaliana | MDNQFIFKYSWETLPKKWVKKMERSEHGNRFDTNTDYLFQLLCFLKLHTYTRVQVLIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISSVVSLFPSAGWWEREVWDMFGVSFINHPDLRRILTDYGFEGHPLRKDFPLSGYVQVRYDDPEKRVVSEPIEMTQEFRYFDFASPWE |
| NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 | D | 385 | Arabidopsis Thaliana | NFTLNFGPQHPAAHGVLRLVLEMNGEVVERAEPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMAQEHAYSLAVEKLLNCEVPLRAQYIRVLFCEITRILNHLLALTTHAMDVGALTPFLWAFEEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRIDELEEMLTGNRIWKQRLVDIGTVTAQQAKDWGFSGVMLRGSGVCWDLRRAAPYDVYDQLDFDVPVGTRGDCYDRYCIRIEEMRQSLRIIVQCLNQMPSGMIKADDRKLCPPSRCRMKLSMESLIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHSQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR |
| NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial | E | 192 | Arabidopsis Thaliana | TALNYHLDSPDNKPDLPWEFSEANQSKVKEILSYYPSNYKQSAVIPLLDLAQQQNGGWLPVSAMNAVAKVIEVAPIRVYEVATFYSMFNRAKVGKYHLLVCGTTPCMIRGSRDIESALLDHLGVKRGEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYFEDVTPEKVVEIVEKLRKGEKPPH |
| NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial | F | 434 | Arabidopsis Thaliana | EKTHFGGLKDEDRIFTNLYGLHDPFLKGAMKRGDWHRTKDLVLKGTDWIVNEMKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERLNLEKARREAYAAGLLGKNACGSGYDFEVYIHFGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFSSFGRKNNAGTKLFCISGHVNKPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAIIPGGSSVPLIPKNICEDVLMDFDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERMKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIRERAERELLQA |
| NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial | G | 688 | Arabidopsis Thaliana | RNPVGGARVHFSNPEDAIEVFVDGYAVKVPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTPIAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLGPLVKTVMTRCIQCTRCVRFASEVAGVQDLGILGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKARNWELKATETIDVSDAVGSNIRVDSRGPEVMRIIPRLNEDINEEWISDKTRFCYDGLKRQRLSDPMIRDSDGRFKAVSWRDALAVVGDIIHQVKPDEIVGVAGQLSDAESMMVLKDFVNRMGSDNVWCEGTAAGVDADLRYSYLMNTSISGLENADLFLLIGTQPRVEAAMVNARICKTVRASNAKVGYVGPPAEFNYDCKHLGTGPDTLKEIAEGRHPFCTALKNAKNPAIIVGAGLFNRTDKNAILSSVESIAQANNVVRPDWNGLNFLLQYAAQAAALDLGLIQQSAKALESAKFVYLMGADDVNVDKIPKDAFVVYQGHHGDKAVYRANVILPASAFTEKEGTYENTEGFTQQTVPAVPTVGDARDDWKIVRALSEVSGVKLPYNSIEGVRSRIKSVAPNLVHTDEREPAAFGPSLKPECKEAMSTTPFQTVVENFYMTNSITRASKIMAQCSAVLLK |
| NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-A, mitochondrial | I | 169 | Arabidopsis Thaliana | KEISKDWNTVFERSINTLFLTEMVRGLSLTLKYFFDPKVTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHEELLYDKEKLLENGDRWETEIAENLRSESLYR |
| NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 | O | 80 | Arabidopsis Thaliana | KKMIATQEEMSAAKIALGSRDMCAHLLIPLNKCRQAEFYLPWKCEDERHVYEKCEYELVMERMLAMKKIREEEALAKQNK |
| Gamma carbonic anhydrase 2, mitochondrial | Y | 268 | Arabidopsis Thaliana | GTLGRAIYTVGNWIRGTGQALDRVGSLLQGSHRIEEHLSRHRTLMNVFDKSPLVDKDVFVAPSASVIGDVQIGKGSSIWYGCVLRGDVNNISVGSGTNIQDNTLVHVAKTNISGKVLPTLIGDNVTVGHSAVIHGCTVEDDAFVGMGATLLDGVVVEKHAMVAAGSLVKQNTRIPSGEVWGGNPAKFMRKLTDEEIVYISQSAKNYINLAQIHASENSKSFEQIEVERALRKKYARKDEDYDSMLGITRETPPELILPDNVLPGGKPV |
| NADH-ubiquinone oxidoreductase chain 1 | H | 324 | Arabidopsis Thaliana | YIAVPAEILGIILPLLLGVAFLVLAERKVMAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSANFFLFRMAPVATFMLSLVAWAVVPFDYGMVLSDLNIGLLYLFAISSLGVYGIIIAGRSSNSKYAFLGALRSAAQMVSYEVSIGLILITVLICVGSCNLSEIVMAQKQIWFGIPLFPVLVMFFISCLAETNRAPFDLPEAEAELVAGYNVEYSSMGFALFFLGEYANMILMSGLCTLFFLGGWLPILDLPIFKKIPGSIWFSIKVLFFLFLYIWVRAAFPRYRYDQLMGLGWKVFLPLSLAWVVSVSGLLVTFQWLP |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2020-10-23 Deposition Author(s): Klusch, N. , Kuelbrandt, W.