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6ZG3

The structure of ecf pant transporter in a complex with a nanobody

PDB DOI: 10.2210/pdb6zg3/pdb

Classification: TRANSPORT PROTEIN
Organism(s): Lactobacillus Delbrueckii Subsp. Bulgaricus Atcc 11842 = Jcm 1002 , Lama Glama

Deposited: 2020-06-18
Deposition Author(s): Guskov, A. , Setyawati, I. , Slotboom, D.J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.8 Å

6zg3
Literature

The structure of ecf pant transporter in a complex with a nanobody

Guskov, A. , Setyawati, I. , Slotboom, D.J.

Primary Citation of Related Structures: 6ZG3


Proteins
Molecule Chains Sequence Length Organism Sequence
Energy-coupling factor transporter ATP-binding protein EcfA1 A 300 Lactobacillus Delbrueckii Subsp. Bulgaricus Atcc 11842 = Jcm 1002 , Lama Glama MHHHHHHHHHHGENLYFQGSDNIISFDHVTFTYPDSPRPALSDLSFAIERGSWTALIGHNGSGKSTVSKLINGLLAPDDLDKSSITVDGVKLGADTVWEVREKVGIVFQNPDNQFVGATVSDDVAFGLENRAVPRPEMLKIVAQAVADVGMADYADSEPSNLSGGQKQRVAIAGILAVKPQVIILDESTSMLDPEGKEQILDLVRKIKEDNNLTVISITHDLEEAAGADQVLVLDDGQLLDQGKPEEIFPKVEMLKRIGLDIPFVYRLKQLLKERGIVLPDEIDDDEKLVQSLWQLNSKM
Energy-coupling factor transporter ATP-binding protein EcfA1 F 300 Lactobacillus Delbrueckii Subsp. Bulgaricus Atcc 11842 = Jcm 1002 , Lama Glama MHHHHHHHHHHGENLYFQGSDNIISFDHVTFTYPDSPRPALSDLSFAIERGSWTALIGHNGSGKSTVSKLINGLLAPDDLDKSSITVDGVKLGADTVWEVREKVGIVFQNPDNQFVGATVSDDVAFGLENRAVPRPEMLKIVAQAVADVGMADYADSEPSNLSGGQKQRVAIAGILAVKPQVIILDESTSMLDPEGKEQILDLVRKIKEDNNLTVISITHDLEEAAGADQVLVLDDGQLLDQGKPEEIFPKVEMLKRIGLDIPFVYRLKQLLKERGIVLPDEIDDDEKLVQSLWQLNSKM
Energy-coupling factor transporter ATP-binding protein EcfA2 B 287 Lactobacillus Delbrueckii Subsp. Bulgaricus Atcc 11842 = Jcm 1002 , Lama Glama MAIKFENVSYVYSPGSPLEAIGLDQLNFSLEEGKFIALVGHTGSGKSTLMQHFNALLKPTSGKIEIAGYTITPETGNKGLKDLRRKVSLAFQFSEAQLFENTVLKDVEYGPRNFGFSEDEAREAALKWLKKVGLKDDLIEHSPFDLSGGQMRRVALAGVLAYEPEIICLDEPAAGLDPMGRLEMMQLFKDYQAAGHTVILVTHNMDDVADYADDVLALEHGRLIKHASPKEVFKDSEWLQKHHLAEPRSARFAAKLEAAGLKLPGQPLTMPELADAIKQSLKGGEHE
Energy-coupling factor transporter ATP-binding protein EcfA2 G 287 Lactobacillus Delbrueckii Subsp. Bulgaricus Atcc 11842 = Jcm 1002 , Lama Glama MAIKFENVSYVYSPGSPLEAIGLDQLNFSLEEGKFIALVGHTGSGKSTLMQHFNALLKPTSGKIEIAGYTITPETGNKGLKDLRRKVSLAFQFSEAQLFENTVLKDVEYGPRNFGFSEDEAREAALKWLKKVGLKDDLIEHSPFDLSGGQMRRVALAGVLAYEPEIICLDEPAAGLDPMGRLEMMQLFKDYQAAGHTVILVTHNMDDVADYADDVLALEHGRLIKHASPKEVFKDSEWLQKHHLAEPRSARFAAKLEAAGLKLPGQPLTMPELADAIKQSLKGGEHE
Conserved hypothetical membrane protein C 215 Lactobacillus Delbrueckii Subsp. Bulgaricus Atcc 11842 = Jcm 1002 , Lama Glama MYDSEARQKTLNLTVSAVFVAILLLEAFIPNVGYITILPGLPAITTIPLTVAVFASLRGPKAGAAFGLVWGLTSLLRAYVAPNGLVTILLFQNPLIALLPRLAAGWAAGLAGQLADKWEKESRKPLAYALSGLLASAVNTLIVILLSDLVYFIHPQKLALALGAKSGQSLLVILFTALAVNGILEAVFSGLITPLITAPLKKRLKRRWSHPQFEK
Conserved hypothetical membrane protein H 215 Lactobacillus Delbrueckii Subsp. Bulgaricus Atcc 11842 = Jcm 1002 , Lama Glama MYDSEARQKTLNLTVSAVFVAILLLEAFIPNVGYITILPGLPAITTIPLTVAVFASLRGPKAGAAFGLVWGLTSLLRAYVAPNGLVTILLFQNPLIALLPRLAAGWAAGLAGQLADKWEKESRKPLAYALSGLLASAVNTLIVILLSDLVYFIHPQKLALALGAKSGQSLLVILFTALAVNGILEAVFSGLITPLITAPLKKRLKRRWSHPQFEK
Putative cobalt ABC transporter, permease protein D 265 Lactobacillus Delbrueckii Subsp. Bulgaricus Atcc 11842 = Jcm 1002 , Lama Glama MSKIIIGRYLPGTTFVYRVDPRAKLLTTFYFIIMIFLANNWVSYLVISIFGLAYVFATGLKARVFWDGVKPMIWMIVFTSLLQTFFMAGGKVYWHWWIFTLSSEGLINGLYVFIRFAMIILVSTVMTVTTKPLEIADAMEWMLTPLKLFKVNVGMISLVISIALRFVPTLFDQTVKIMNAQRSRGADFNDGGLVKRAKSVVPMLVPLFIDSLEVALDLSTAMESRGYKGSEGRTRYRILEWSKVDLIPVAYCLLLTILMITTRKH
Putative cobalt ABC transporter, permease protein I 265 Lactobacillus Delbrueckii Subsp. Bulgaricus Atcc 11842 = Jcm 1002 , Lama Glama MSKIIIGRYLPGTTFVYRVDPRAKLLTTFYFIIMIFLANNWVSYLVISIFGLAYVFATGLKARVFWDGVKPMIWMIVFTSLLQTFFMAGGKVYWHWWIFTLSSEGLINGLYVFIRFAMIILVSTVMTVTTKPLEIADAMEWMLTPLKLFKVNVGMISLVISIALRFVPTLFDQTVKIMNAQRSRGADFNDGGLVKRAKSVVPMLVPLFIDSLEVALDLSTAMESRGYKGSEGRTRYRILEWSKVDLIPVAYCLLLTILMITTRKH
CA14381 nanobody E 136 Lactobacillus Delbrueckii Subsp. Bulgaricus Atcc 11842 = Jcm 1002 , Lama Glama QVQLVESGGGLVQPGGSLRLSCTASGFTLDDYAIGWFRQAPGKEREGISCISRSGSSTTYADSVKGRFTISRDRAENTVYLQMNSLKPEDTADYYCAATPVWYWSCAVKVGPYDYWGQGTQVTVSSHHHHHHEPEA
CA14381 nanobody J 136 Lactobacillus Delbrueckii Subsp. Bulgaricus Atcc 11842 = Jcm 1002 , Lama Glama QVQLVESGGGLVQPGGSLRLSCTASGFTLDDYAIGWFRQAPGKEREGISCISRSGSSTTYADSVKGRFTISRDRAENTVYLQMNSLKPEDTADYYCAATPVWYWSCAVKVGPYDYWGQGTQVTVSSHHHHHHEPEA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2020-06-18
Deposition Author(s): Guskov, A. , Setyawati, I. , Slotboom, D.J.