6YWY
The structure of the mitoribosome from neurospora crassa with bound trna at the p-site
PDB DOI: 10.2210/pdb6ywy/pdb
Classification: TRANSLATION Organism(s): Neurospora Crassa
Deposited: 2020-04-30 Deposition Author(s): Amunts, A. , Itoh, Y. , Naschberger, A.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.05 Å
The structure of the mitoribosome from neurospora crassa with bound trna at the p-site
Amunts, A. , Itoh, Y. , Naschberger, A.
Primary Citation of Related Structures: 6YWY
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Related to ribosomal protein YmL20, mitochondrial | A | 225 | Neurospora Crassa | MEASLSLFRPVATCCRRVALSSSSSSSQKAAAVAGISVRYQSTANRTKRMLNIPPHESFLNVPVEGDRIIFNPPSSEASVYHTPFKFLPRSDPRRRANIYKLFKPPQAPITTPESSSTDAAAADQHGDLPPVLYNPTKSYNVTPEQVEEIRELRAKDPKKYSVTYLSNKYNCTKVFIMMCTQAPREHQEQHKLARARTAENWGPRRAAAKLDARRRKEMLHRGEI |
| Probable ribosomal protein YmL44, mitochondrial | H | 98 | Neurospora Crassa | MLTRFITDVSTRFNPFSAKAKAARLFLSFLPPNARSNGMNITTQLLPRNSTETPLLYVKFKDGKEMNLDVENMGIKSIVEEVDRHSRILQKQADLNDG |
| mL54 | I | 218 | Neurospora Crassa | MICRTCLRRASGFARPAAAAATRPMVAASSRAAFSTTFSVCTPPAATPAAAAPATSTAEAGLAPVPGAATTEQAKAAISSCPAGTKLNGLNYFKNKADPVALPDEEYPEWLWRCLEVQKKTDDAADADAGDEFSKSKKQRRLAMKRARAQEAKILASGDLEALAPKIPLQKQSVNLPGAVNGGVQDAVLADEKREELRKAMRKERKAKIKESNYLKAM |
| L51_S25_CI-B8 domain-containing protein | J | 201 | Neurospora Crassa | MVGVIRRLNVVRELLNIRAGPGAALLPKEVTKVHMQFAHRIEEGHMGPRKFWRENLPKLKYWNPAVPMVINRTTDQKGPAVMTIYFRDDKDAKPSSTPFPTSSADGSSPAPKPAQGERIVTIDMKNRNSSVILKEFLDKTGAVAVQPTAKDEEEFREFEDLHRRSEIDRERIRKMNDAKKREKAMLAKAMSDAQSIKAASA |
| Related to ribosomal protein L16, mitochondrial | K | 249 | Neurospora Crassa | MKHNASSALLSAFQGLRISSSATPFRAASLATSAVRRPIAPTPVSVASHVRLFSATAIQAGSWLEPNLNRKKKMMKGRPRVPTGGSTKGTTVVWGDYGLRMRDHHRRISAQQLKLAEDTIKQRLRGQKYRLYKRVACNVGVYVSGNEMRMGKGKGSFDHWATRVAVNQIIFEIRGQLHEQVIRDAFRLAGHKLPGLYEFVKKGDPPVVGITKLEDGLTVEDLKNPRKKLLMPEITQSAASTSSTAAPPS |
| uL17m | L | 193 | Neurospora Crassa | MAGAHVKYRHLSRSSAHRQALLRNLVTSLIKNETIHTTYPKAKEAQRLAEKLITLSKRDTETARRSAQGILYTPDQLLPKLFGEIRERYANRPGGYTRVLRTEPKDQYSQAPSAILELVDGPKDMRFAMTAATVARDREQKTESTDLTKKNMDKVTRFRKDGMRAFEDMVASLRDMKFTAGAINPKEWKKLDR |
| bL19m | M | 258 | Neurospora Crassa | MNVTASLSRRPLGCLKAGLCQSLIRGYATAVAASTTQSTGALPDHNFFRIADKHTKKTRTAFAVFTPPKSPTTLPPSSVVTKSKAFKIANSKLPPLMTKPPSDPMPLLTQQQIARMDPTGARTALFSKARHAARVGDVLMVTHRRGGEPFAGVCLAIRRSGIDTAILLRNHLGKVGVEMWYKIYNKNVAGIEIIKRRAKRARRAKLMYMRQPKHDMGSVEQYVFAWKKMRKVLSSKGLTGGVGGGGGKQKGQESKKKN |
| Related to ribosomal protein YmL49, mitochondrial | N | 217 | Neurospora Crassa | MSRALLRSVLELRTPVTRLPPSFLLPFRPAARFLHQTAQQVEPTSQSDAAAAAATLLKASPPKVTTATTPEAPAAVPTSTPFSQQPPISQQVKELLPVLAAQPGHYTTIHIHGKPYLVTEGDTVKLPFKMPGVAPGDVLRLNRASVIGSRDLTLQGAPYVDERLFECRAIVMGTESEPMRVMIKKKRRCRKKKHVFSKHKYTVLRINQLKINDVSSL |
| Mitochondrial large ribosomal subunit | O | 364 | Neurospora Crassa | MSLNVPSRRLLKSAPSSANALVPALQSLSINTRSIHTTPSQQWSLFGWGKQKVEERNKVKEELKQSELARTRKPTQEEIFERVRGRLEGDSIFADTTPSSQLAAEQDKHKDWATASAEKKLAAAHAKDQTPTGISLKKDHLVRVVDPDPRSRVRWERKMVIRKLQRGTDPWSVEPKAERIARTERKLVYKTGYLPTSVKKLVHLSRQIRGKTVSEALVQMQFSKKKMAKEVKTELLRAEAKAIVTRGMGLGKAAAAAAQKETGAEPVKIQTKDGKHLEIRDPTRIYVAETFVNKGFTRGVELDYRARGRVFKMNKPTTTMTVVLKEEKTRIREHQERVAKKLRQGPWVHLPDRPVTSQRQFYSW |
| uL23m | P | 228 | Neurospora Crassa | MASVAKTGAEALRNAPFRVGKKQIFLPNHVITFVRPLPKQPPNLATFIVPLEFNKLDLRDYLYHVYNVEVTGVRSFVNQRMHEQRHGDVGNWRRPKSQKMMIAELAKPFVWPKPPAEDAREAFDYAMWKKQKTAQEQDTKFQGIRAQGEVVPPSQFEVTKDRKAIKARQSKFLSGEETWAPGKVNAFLNSKIVPEEEGWSEVEENLPLDESAESAAEESSSKGSETRQ |
| KOW domain-containing protein | Q | 396 | Neurospora Crassa | MDKLLRRVRMAEGMVARRAQRKNALLKRITERKQNKKNGEAFTEAIQQRKAAVEARNEDWMLGPLAPRRELDEITLSNGNFFGSLSPTRALLESEVSEEERKARVAWCGSPKFLCIAPGDRVVVIEGHHKDLIGTIEKLNTRNMTVEIQSEKLKTNTTVPQFMQNDADKPVTQIYARLPISSVRLVHPLKDPQTGEYRDVIIRELRPRNIVHDRPTRTRSMRRFVPGENIIIPWPKQEPIKREDQPADTLRIDVDEKTFVPTLFRPPAPQQVLDELRNKYSIFRTRHTPEYIAKKEQEEQEKEAKKSAAKAMLTPVQEYNRKQRELRRARGQPALTEEMLAKIGEVVARNKLGHHQAPKVKEETVAQIEKAVEQLSLGGGQEDAATTTSPEQPKVV |
| Mitoc_mL59 domain-containing protein | B | 162 | Neurospora Crassa | AATVKQHVQLALSLPPRLRTFLARYPPASILPAGADPETHKTPYQEESPNPFMPTKHPITGKWHNPKYSLRRQAELVKLAQEHGVEELLPFTRKLNEEKLRKRVELGLRVKGTGVGEKVKGHKHERTLVAKMEKRREAMLAMPDLIREWKKVGKRNWTKFPK |
| Related to 60s ribosomal protein L2 (Mitochondrial) | R | 447 | Neurospora Crassa | MHLAQLRQPLTRAAANSCHSVCRLPTTHSSVSATAILSEQFAHLRIGPSSSNVAVEGRRYASVKAQGAYRLKPKRTIPKKLGAKKTGDQYVIPGNIIYKQRGTLWHPGENTIMGRDHTIHAAVAGYVKYYRDPQLHPDRQYIGVVFNRNDKLPYPKDAPRKRKLGLVAVPRKVEEVEKPTMSASGLPLFVTRHETIEIPPPAVTTPAAAGKAVKGQGARVSASGAAAVPASSSTISASASSNSNNGGSSVIAELIKEKLAARAEYNARQSALRKLQQQKMLARRGTRVLRLMNNYSYRETNWEIGRLIGDPGSVPGTEKVGSRKAKFRARRRRRNTFLLGIKERKLAKADRREEYRRRVREKREQRLVQRKEFLAKQREAKKAREGGAAAEKSEKKEVKAEKPAAAAPKVEKPKAPEAAKKESKPKVEEKKAAAAEPKKDSKTEKKD |
| bL28m | S | 274 | Neurospora Crassa | MSSFLVRPFCLRATTTTTTTTTTTALVQQQLRALTTTTALTYHQPRVPSSAIPIPNVSGRVPLPDSTPVPEDFKIEIPSYPYGPRRVYHQSNTGLYGSALIRFGNNVSKRNEIKTRRKWRPNVQQKRLWSKSLGVFVRTRVTTRVLRTIDKVGGLDEYLLGHKAARVKELGPWGWMLRWRIMQTPEIRERFAKEREALGLPPRREEDEEKSLEEQLREFQVAGIQFAEGKAPKTKGQLKEEADRLIKKSETEEFGLGQEEDLFMKEEPKPTKMA |
| 54S ribosomal protein L4, mitochondrial | T | 263 | Neurospora Crassa | MASPAALRPSMGAIMQTCRSAATAPKVAVAVPVRALSTSAALLKRHKYPTARVTRDNSKQRGESALRKSGTRWKLSVSDEPLPEPVPREELPPIQVDENHGLWDFFYDRETVAMAPLEHTKHGRAWTVSELRKKSWDDLHRLWWVCVKERNRIATANWERTKSELGFGLAEANERDRNVKQTMRGIKHVLTERFYAWEDAVKLAEQDPEIDLSNPENPYTPSTFLEAEETAEGAEASETQSTTTEIDPTTIPSSKSQAEAPRV |
| Related to ribosomal protein L30 | U | 161 | Neurospora Crassa | MSFFRITLHRSAIGLPKRTHGVLAALGLRRRNQTVFHPVEPQFAGMLMKVKELVRVEEVPHRLTKRELKDERKPDAGFVVEKQVRRFIPGVGVQDEVDFSKVVEELKAQKVENVEGVEKMVVEGGAVVRDGKRAGDLGVRTRSDWEVIGKMKSVLPKVKAL |
| Related to ribosomal protein YmL36, mitochondrial | V | 219 | Neurospora Crassa | MSSKLPTTLLRRPSALPSTTTYTAYSASRPTPPSCTAHGAQGQQIRNATFVPRHRRPYQFTQLVQLSDGSTFTVRTTMPTALYKSAKDSRNHLLWQPSDKSLKNVELDEAGKLAAFRERYGRGWDLDAKMTPEEEAAAAAALAAGGGAGVPGGKAAKKAAEEALLAKKKKEEEEAAKKAAEAEEADPFDSLTDLISGYATENMNPGLNFKETRHYGKKK |
| Related to ribosomal protein YmL32 (Mitochondrial) | W | 129 | Neurospora Crassa | MAAMTAAAAAPAMRLFNPSTFFQTLRTQRFGVPALNFAVPAAAISLLPSIPSLLEDIWEGILRAVPKKKTSHMKKRHRQMAGKALKDVTHLNRCPACGNLKRMHHLCSTCLGKLKGFMDRNGGSNAKAY |
| bL33m | X | 59 | Neurospora Crassa | MAKKAKSRIINVRLISMAMTGYFYTFTRPRTSLPMSMLKYDPIVRRKVLFLEQKRKGRS |
| Related to ribosomal protein L34, mitochondrial | Y | 140 | Neurospora Crassa | MSRIFSSALQAVFKPSAFLPKTATRSFSILPSLRPATLSSTPSTIFRAPNAITAPSASPSATTGIDGEVLDLLSASSLISSHPALSGLGSQIRCGPRPTMSGATRLVQKRRHGFLSRVKTKNGQKTLKRRLAKGRLRLSA |
| Ribosomal protein | 0 | 124 | Neurospora Crassa | MSNLFRSLASSMRALSLAAPRATAVNTTKTVVSTHQTRCLSQGLLSRHICTPMCSHNRPVAVCQSAKNGLQSKQQSRGMKVHSAIKKRCEHCKVVRRKANKRQNGYLYIICPANPRHKQRQGYR |
| PEBP-like protein | 1 | 449 | Neurospora Crassa | MSTCQQVARPLVRCLRQTGPGAATCSTRSVAVAAVRPFSSTPMRKEEGATTTTTTSPVDSTTTPPPLPSATEAKATVADTVVGGPELGSRRRRAALATTGNLPFEQLPYQCFQDARKILQQDRAAKIAQIVKETEKIKLIEARDASEFEGGEAAKQTRIKSLRKYIEELKILADINDPEVKRRFEDGRGDMTKPVYRFMAERRWRSMDYKIIAQRISQFHVVPDLLPAFDPTMDVKLSFRGYQVSPGAILDSRVTEVAPTLRMQVFDKGERLLTVVVIDSDVPDVTHDNFKRRCHFLAANIPWDPSKTVLSLRSVGDRVEGDVGKPWLPPFAQKGSPYHRLNVFVLEQKPGAKIDGEALKKHLENRENFSLKGFREKFDLEPVGFNLFRSEWDEGTAEVMERHGIPGAEVEFKRQKFASLKPPRKARGWEAKRQKPKYKSLWKYVKRIA |
| 54S ribosomal protein L31, mitochondrial | C | 110 | Neurospora Crassa | MFGAFRFTNPLSGGLLWKIPWRMSKFQKLRQRRRLRAVDNVVATIENALAKKGETVKAVERWRAEMPTEAEMLPKDKYTIFDRKEKRYRKGIHKLPKWTRVSQRVNPPGY |
| mL40 | 2 | 370 | Neurospora Crassa | MVSATKKPVSAMSAKNSTRHRKVSHKVTKTIATAKSQVISNKAMKIRTKSWKDMPSPKRRRRINAMVDELRLQGNVKMPKPGKSTYKAGGGERVRLVKAASTLPTPPLTPPVLSKPTGSASQSKGDLKPKRPTPEKKRSVSKRDVERFFLSTQTSTRRRENTPIHAPIMSSTFTSLRGLATRLFAGGARPSPSSLLLPNKPATAALPTAIQHQQTASYASKGKSGPPAGMFSGQKAGSKKSKGPKQVDPRIINILRHFAVLSPKRIPPPLRFGRNRYLRHWTIHRAWLLFRRQQREQRERILMQQHQSMSNACEELRNTEGPGTRETGYLYRVAMLKNGVYGLKSIPIEYASRALVETPGRQAWNHEWKR |
| mL41 | 3 | 103 | Neurospora Crassa | MQPTRILQGLKYRKLRLTTKDVNKGFYKGNRTGSMGTHTSYGTYKIDYTKVRTYVCPDLTGFKLTPFVSKTIRPVHDQFPGDKLGPKNPATYLARWKSENGLD |
| L51_S25_CI-B8 domain-containing protein | 4 | 138 | Neurospora Crassa | MTVKALTQISSAGRNGVGAFVLQCKKLDIHYSDWAGSSRGMNGFIKSLLPKFAAANPQIEFVVSPRPAKHPILMGHYINGRTKAICVRNMEPLEILKKAELLRDASGEKPQKFKKPVTSTNPSVRGVWSPYHGQGMAV |
| Ribonuclease III | 5 | 439 | Neurospora Crassa | MKRIATPSLTSRLLVAARSGVSPATAAIRSRSAISVRSQSTAALAQHDASHDLNNDRFPPLEPLPPAAESLPSPLPERALTSAKLAALHARLNLSPKIPLQTLARTLVDASADENPQFNNANLAFVGQTLINYHIAEWLLCKYPRLPQGILFSAMKAYAGPKPLLQIARSWGVDTAAVPGGEVDPGLLQFDALKPGVAITNFGYKRTELAYLEKFKWRRGMASRVVLDDDFGDVVRSDPKVAADLEKAMEEQDQDKTPDEEEAEMVANEQDQDVSYDRYGNPDTRAAAERAHAYFVRAVVGAIYAHCGREAAKAFVKAHIMSRTLDIAKLFEFKYPTRELAALCAREDFEPPVARLLSETGRQSRTPVFVVGIYSGSDKLGEGAASSLDHARFKAAMNALKAWYLYSPGENPRVPSDMLEEGAKPWTPAYIDMGEVISR |
| mL46 | 6 | 368 | Neurospora Crassa | MSASSRGAALLRSQQRSICLQCRNQTRVLAPAGVTSAPRRFYSAEASATATATATATTTTTLPPPHPPVTTSTGTHAATSTSSQIYRIKSGVILTRPPLLTRDLTPFEESFYFYQKRLNERLTAPFRKDFYFKKDTAADLDWRIKLKERHGVPAKDIGRYNPRGRMAWNDEVLVGSQTSSRKHMVEKLLADAEMRVSEDGEEIPAEDRVPVEKPMPRRTEADEKGDVKRLDRALDKTLYLVVKKKADKEGEEAKWMFPTGVVPTDEGLHETAARILAESAGVNMNTWIVGRVPVAHHVVRPVFGQKDGALLKKGEKIFFLKGRIMAGQADLTDNLHDLVDFKWLTQEELRSTLAEEYFHSVKGMFAER |
| mL49 | 7 | 165 | Neurospora Crassa | MFRSTFFGLSRAIVQPATPLTVRAAFQSRFYSAAAAASQPTTTATTTTPLQQQQQQQPTTQPTTPIQTQTGAAPTESTKPVAKPYLVGRAWTQRLPVYHLAKRGGNKKLTQIKKVQGDGQALRRDLAQFLGLEVKEVRVKVPTGHLEVDGHRREEIVKFLDGLGF |
| mL50 | 8 | 443 | Neurospora Crassa | MRRIPRIPSTASALCSSSSSVASTSAAPLRTLRAAADSSSICQSCSFSTQTSATRNRVWQNTVQTQRRCASTVTETTPEAPVAAAAAETATESTETVEQQRKRKGGFFETQRQVNLVLPGQPTRADAPEKIRDPNYEPATSGAGLQEIGGMSDWWSKPEHFRDGGKQFEYQGFAPQEKITDPRLLKVILRRALAEGLALKKFGANPKNPADMASIIGNGDHWQRTVSVEMCRGENGELSLKNESDLQKVWILMRNAAEKTYYQREWQEEINRLRSLGEKEQAKQLLEEGKKLGYRLKSEEGSLVKLTVDEAVELRKSWNNDWKEAIIRDPVVKFYAAKRIQKMTGHILSDGKLTSIQTVANFMDALVTPPKPKKLAEQIEQSSILPELPNVKVYPRRVTPVDKERMVGRWKVIQKELQKRELPVLGTGNHGKYVELKWLGSKQ |
| RNase III domain-containing protein | 9 | 267 | Neurospora Crassa | MAALTPSRSVFASTCKTIAQQCSRRPVAVQQLAAVPVARQVSSSSAVQQEQDASGTSSSQQPRPRWSYTPERMKGPGFSLNLVKDPRRKQWMVNSDPAKLDAFYDAFLGQGGSRMLSEETKWLAVTHKSFDYGRRGYNTRLAFLGRQIIALETTRSILTSPVLNEPIVDKYGRTPYNHAALANIDKLIYTQPLDIMDKTKIARMGIDFGLLTVMRWKPRMPEDLESSGVVVVLNSTLFAIIGAISLEKGAAVAQRIVREKILKRLGA |
| mL67 | D | 292 | Neurospora Crassa | MNSVTTSTIGRLAFGVSRLSAVTNVAGAVRHASTHPTTAIPKPTTAVLKTSPLAEETAVELKSPSRLQLKSEPGNKGNPKGHGDRIWAFHHIEQGQVIYSTKPVISHQHLIRQQPFTGKNLVPRKIRKDYWRPLAMIELAGKDQGAVGRSVYQKLREFKKRHELDWANEAEEGRKLMHKSKRERGQELNDQKPNSVADMAAVLAGAGKGNLMWQVSRLGSSSELVGEIKKASGAVEKGAVVDVKRQLRRATVYWTNEQDKFHAREWSDNVSHEVGIPGEAEKKRMPIRMSSE |
| Poly-Peptide | CC | 7 | Neurospora Crassa | AAAAAAA |
| S4 RNA-binding domain-containing protein | DD | 453 | Neurospora Crassa | MKIRRLFKYHSLKKKPIRPTWNKYNLYNLATAGREPRISGKTFFQQKWLAKSLTRAYHGEHIKERKWARMFSRRLPAVVNMDPAYMAKYNGSEQAAGRGSGLSEPPAYEKTADEKPAKQVIANPGRKVPTPYEQMTFAPLERRLDIAIFRALFASSARQARQMVVHGAVTVNGKKMKHPGYLLNPGDLFQVDVERVLYATGAPKDKKLLAAAMKAAKKELAEEAQEAAEEKDAEAEEAEEGEAQEAASKSGKKEKQVDTSKFDEAWNRKYELLQLQRLLQYAKHIADSPSHQLSATRKQALRALKRDIKAAIKQAQRRDGSVSPTGNVVDDLTMLLERLAVSPSKAIQQEEAAKELSKKLDKQSRQVLKKVIEYNDEHEDNEIDPSKPYMTPWRPRNYMSAFAFIPRYLEVNQNICAAVYLRHPVARPGESEVPSPFSPTINQLAFNWYLRRG |
| Ribosomal protein S6 | FF | 117 | Neurospora Crassa | MLYETIGIVRPGNIAEVKELVLTAGKLILNQGGVIRDIKNWGTFLLPRPISTNQQRHNRGHYFVMRYDASIATHEEVRRTMKADPRVIRTANVKLGDGKLETLSRFGAIPWRSLEEA |
| 60S ribosomal protein L1, mitochondrial | E | 303 | Neurospora Crassa | MASTQQCLASLARLSLSTPTRAALPTIPKFLVPSVAASQVRYATNNPNKGGAKKAPKKKKQYKFFKSWDLTGQQQFSLCDAMRYLRAVEVGQPPLSVKYEVHVKLRTKKNGPVVRDRVRLPTPVKTDTRIAVICPEGSALQEEAKNLGAVMAGEETLFEAIRSGNFPFNKLLCHTESEGALRKANVGKLLGPKGLMPSGKTKTITNNLEATFRDMIGMDEYRERNGVVRMAVGQLGFTPKQLAENIRVFMAKIKSDIGKLDDTTPKMVEEVVLSTTHGPGMSLNAEFAPTDDKIKPEDLESVM |
| Ribosomal_S7 domain-containing protein | GG | 309 | Neurospora Crassa | MPARLGLSAAFRSLSIRTNQLPQQQSIAAAVQARTLITDSTTSSRLPPRVQIQQQQQQRTQPYSTETTPPPNSNNGDLAGIEGQPPVEVTPENAAALSQLSEIAYGVKAADVAIEGHKYGLPTLPLPSELHHKYRYSEVVNHATKLLMKDGKLSKAQRDMAMILNYLRSSPPPKLNPSRPLIPGHPPASHLPLNPVEYLTVAIDSVAPLIKMRGYKGLAGGGRSLEVPQPIPARQRRSTAFKWILDVVNKKPSKGSGRTMFAHRVAEEIVAVVEGRSSVWDKRMLIHKLGTANRANLNSPALQLKGKRF |
| uS8m | HH | 161 | Neurospora Crassa | MGIQQITNMCSHLQNASRARLGLTSLPNTKYNLALALALHRAGFISSITRGGPHPPTPEALMTYEPEPVTSANVATRRLWVGLKYWNEEPVLKELKPISKPSRLVTASLEQLNRVARGFPAGYMKGLQLGECLFVNTDRGVLEVREAVERKVGGLVLCKVK |
| uS9m | II | 315 | Neurospora Crassa | MMASLRHSITSALRSSRQGCSKSAQWQSLDQQFGALRISSRSLSTHAHDHNPNVDGQFIAAPALSIDNFKLHPYARAVPVSPSYFTRTPRFYDNYLSLEKLMEEYEDLPVIPATAVERVAWKTLEDIRKELGEQVKASEFARCLALVKRLNSIHPDLKPQEIKDVLDSFRRNVQPFTNVAKPIPIDQFGRACGVGKRKASSARAFVVEGTGEVLVNGKTLAEYFGRVHDRESAVWALRATNRIDKYNVWVKVEGGGTTGQAEAITLAIAKALLAHEPALKPALRRAGCVTRDPRKVERKKHGHVKARKMPTWVKR |
| 30S ribosomal protein S10, mitochondrial | JJ | 268 | Neurospora Crassa | MIIRPVVRSLQGRAPLATLRSAQSVFQPLPQLRRNASVTTGPDAASKASTTPIARITTTTEAPKDQKKAKAAAAAAAEPEEQEVIMSRMPRSLEALYLQPLRREAEYGVPSCDLQLRSYSIRNLEFFCDFALRAAYYLGLPAFGPVPLPRMIERWTVPKSHFIFKKSQENFERVTLRRLIQIKDGHPETVQLWLAFLQKHAYYGIGMKANVWEFSKLGVSKAMDESKSEVEKLLETRWEHLSHVSDMKGVGNFEDFLAKERLRISGGR |
| Translational machinery component | KK | 376 | Neurospora Crassa | MAGQIDPIRAELVGWTPRVPRNLLASLPPLGRKTAPKLPQNISFSPPLSAHPCYQCQEKCLPHRRPVSWSPLILQRCRLRCLPRGHPLKISRTFELPVGERDGSHPLTAFARAPRTTEPRSLHYLYDSLPPTPALCAQLLFHQLIQGHFSFVVHPTVATAPRSIWPAKMSRFSTGRLLAQNLFQAFNKPVFPSATPVWTRAFSQTAARRDADSESSAKLMESLTRGIVGMAADPTDLTGDKLATNIGLRDTEDEPYHFHIYSHKHNTHITVTKPNRDALISLSCGNLGFKKSNRKHYDSAYQLGAYVVDKMHQMNLHNKIKKMEVVLRGFGPGREAVIKVLLGNEGRMLRSSIVRVSDATRLKFGGTRSKKPRRLG |
| Ribosomal protein S12 | LL | 174 | Neurospora Crassa | MATTFLRNLFSQAQPSLLRRPLMPSSSSILPAAARLFSSTPAQNATLNQVMRGCRKPQRARHAVSPALSSIKSPALKGVCVKVGITRPKKPNSGERKTARVRLSTGKVITAYIPGEGHNISQHSVVLVRGGRAQDCPGVRYHLVRGALDLAGVATRMSSRSKYGTKKPKKASVG |
| Probable ribosomal protein S13 | MM | 119 | Neurospora Crassa | MVFILGVNFNEHKLVQKALESFYGLGQQASARILAKYSIHPRAKMGTLPPKIVTALTAELSTMTIENDARRLVLDNIKRLRDMGTYRGRRHAMGLPVRGQQTRNQIANARKLNKIERHG |
| Mitochondrial 37S ribosomal protein MRP2 | NN | 113 | Neurospora Crassa | MSMFRAKKLDLGCFTNVRVLRDHSKRKAFLEAEPERQALRYVIRNTTLPARTRAVAQLQLTQMHAYTRPTQIRNRCILGGKSRGILRDFKMTRYNFRMNALMGNIPGVKKASW |
| Related to ribosomal protein S15 (Mitochondrial) | OO | 320 | Neurospora Crassa | MPPRLPGPQGLRSLTLCLRPAVASPAQALQPLIQTANISQKEKKRKMKQDPYGWAQAQQRKAVNVKRQAELQAQRDAAWGDPVKGITTPFVESFDSAGQASVSPPKVGPDGQLVEEPKPLPTSPHLRNYLLNKDEFDSAIQYAEHILKPIKAEDRLTADPEKEDEEAREHAARHAKAVAALERIAKLEHGGAKDRKHANIRRCIETFGRHITDQSLERPTPPLARGVEPKPQPVRAGPDTGSSEVQIAILTSKIRALSKALEGHGGNRDKNNKRSLRRLCHKRQRLLRYMERKERGSGRWHHMLETLGLTPATWKGQITL |
| bS16m | PP | 107 | Neurospora Crassa | MVLKLRLARFGRTNAPFYNIVVAHARTARNSKPLEVIGTYDPVPKKDTYDTTGKLHKDIKLDVTRAKYWIGVGAQPTDTVWRLLSLVGILDPKYKKPQPAQEQKTKA |
| Related to ribosomal protein YmL11, mitochondrial | F | 347 | Neurospora Crassa | MSLRLSRPAVRGLGSAIKSSRISSRSAALLVPSTSTSAFSTASPQRAAAAGHLRLPDDYVPPTQPPSARPVDTRKSQLLRTYTSMLRSTPLMLIFQHNNLTAIEWAAIRRELSLALSNVPVPEGAPDITSKIHLQVVRTRIFDVALKTVEFFDPSTVEPTTATTATGTKVPATYNHDLSKHAWKAVKEATKNTEAVEKTVYGQLAPLLVGPVAILTLPSVSPAHLGAALSVLAPSPPAFPAPSRKKNPGYYDLTCQSGLQKLLLVGGRIEGKAFDYDGIKWVGGIENGIEGLRAQLVHMLQSAGMGLTSVLEGAGKSLWLTMESRRSVLEEEQNPKKEGEGEEEKKE |
| uS17m | 165 | Neurospora Crassa | MASTIAAATKVSRKMFRELHGVVVTSGLIDKTVKVRVGGQKFNKFLQKHFDDPKQYLVHDPNNSLRAGDVVAIMPGFITSKSKRHVVKHIIAPAGTPIEERPPIPSLDELWDAKDAAKAAKKERKVLREKMQAAEEAIELAERMARHAVREIAMREKIISLQKVD | |
| Ribosomal protein S18 | RR | 256 | Neurospora Crassa | MSSSRQFLSSALRQCRAAGQRTAQFSTTSPAAAIRDIPTTSFQNAPRTNTNTSSPSSNNNNNAGSSQYKSDMFNLLNSGAGSRGGRDSYNNARDVDGGQRYGSNSQKVQELLQSEVTSNNYMRMMRRRWNNGDVYAPRDLSPYEMKGRNGGWVEAADVVDELGFSPLDNYRNFSLISDYITPFGRIRHSKETGLKPVNQRKIAKMVRRAIGLGIHPSVHKHPEILKNSNGRHLLPLVVPKGQKANKTKNFDGEDEN |
| Ribosomal protein S19/S15 | SS | 91 | Neurospora Crassa | MQPTRVLFKRSVWKGPHIVPLPIQRPEPGKKIAPIRTQARSATILPNFVGLKFQVHNGKDYIDLTVTEEMVGHKLGEFSATRKPFIWGKKK |
| bS21m | TT | 236 | Neurospora Crassa | MELRSALQSVCRTTAAAASASARSSLAGRHAFSTSARFQLQPPPNPYVSGKSRIETLRAALSNRKPAAGAAAGGSPGATSASSALPPRPPTANDSPWSIVDAINKDSNSSTSSSSSSSSSGGALYSSSKPSPMQTWNETDFETRHMAPQQELNIRLRPSTGRTFYVSGHQDFAGALKLLHRTVAANKVKKDVRLQRFHERPALKRKRNLRERWRARFKEGFKAAVNRTFELKNQGW |
| 37S ribosomal protein S25, mitochondrial | UU | 253 | Neurospora Crassa | MGKGRIFQAAKVYQRASEAAATNIVSGLPPRNPPLWLKAIESIPPAEINTRPYPIQHSPPNPRARKPRNLFRPTKIVYPEDELRRDFYRDHPWELARPRMIIELDGKDARFLDWSKGLRQRGIPLSGERHGNWMLTRIANDSVVQRQLWLMENQGMTKQEAYDKARHEFYKLRQLEQMERRIAVEEARMVGGYFGKDLLTVGMELENKTYESWKKWATTEIARQESARASMYTNVVDNSALEESEEDELLAQN |
| mS26 | VV | 316 | Neurospora Crassa | MAPTLARPSLSGVQFILSSPTTTCAATSVVTRAIAARSFSTTRSARDSVSIPPDSPNYIKVPEPPQSSEVRHPFVKGHLPIPRSIFPKKGVPEKVQSGYVNRIAPKSAAELAGLPPKSKQESWRRKMAEARRQSLEAGLQGLWQRKVKRDQKQAKESKARYLANKRAAQAPERLDEVFTRATIRESTAKNTFVPLDPEAFVKAEEARIKHAEKEAMKSEARRDAVVQLYVASKNFIVDEKELEEHVNKHFTEKIHNAGLWESGRSIWDSQKNPISMRELRNEFSGFNDRVTATTSAAVKTTVRQKNVAEELTGGKL |
| mS27 | WW | 396 | Neurospora Crassa | MAGRAPQHALRVGCRAVPEALSKPAQQSRCLSSTVPRQATYPVVSFNKTSSPELKEALETLREKVILPTYLPPELRQKIFNKKYEKELAHDPVTIQIDGQPQRFSYINMLTDMPNTPKNIRAALLSMKNGGDFANLSGLLEGMHRANRKLPYWLSAQIVRKACKAGHLQLILNMVRDVKRTGFTLERHETVNELLFWIQRFAWKSDYSEPETRKALREVQEILDALEGDERHMSKDRKRQQALTRFPYHRDPQFLAARLNLTAELAARRAVTGQTSEQQLNSANDVKNLVKYAEQLVRLWPADKALLDMYTDEAYVARVDLRYLIKPQVHLRYASFTLQALKNAAKIVGQLGHGPLAAQLINRAAAVEAESQLAYAKVDDGMAGQKIYEMVVGGKK |
| Mitochondrial ribosomal protein DAP3 | XX | 469 | Neurospora Crassa | MSASNCLRCLVRPSAVALVPRQMLQVGGGSLTFTATAATKGASSANTGGRQNANRPQKLRFKKTKKKNVVSSGKPPLPGERKAYRKKIVLSNNNALPVPGLETLRPNDLAKQDNVGSVKALPEDVVDALRAMEAFKPTQCWGIFRQPSVLIRQETVDLTKKMKAAGADGKTIRMVIEGNRVTGKSLLLLQAMTHAFMNDWVVLHIPEAQELTTAVTEYAPIENSPLWTQPTYTLKLLQSFKRANEKVLSRMNTVYSHADLPQIIPVNSPLLQLINSAKEADGAWTVFQALWRELNAENVPGRPPILFSLDGLAHIMKVSDYRNPAFELIHSHDLALVKLFTDCLSGATVMPNGGAVLGATTRGNSPRSASMELAIAQREAEKAGEKEVPQRDPYSKKYDDRVEAVMKSVEILRLKGVSKTEARGLLEYWAASGMLKKRVDESMVSEKWTLSGNGVVGEMERASLLTMKA |
| mS33 | YY | 108 | Neurospora Crassa | MSVPRARLLQLVKARCELFSTTFNPEGIRTGNKILRQRLKGPALATYYPRKNVGIRELQKEFGTLGLEVDDEVDDDRLEHLAALRARDKGAPKKKRTAPSAADAKKKK |
| 37S ribosomal protein S24, mitochondrial | ZZ | 382 | Neurospora Crassa | MASSANALRLGLRTCSRPTQTSNLRIAALQRRALSATATRCEGVPVPKREDDAKLEFTRPYNPGEFLSEKLRSDDLQDWERERYERALTSWEQTPDDLKRGWSTMIRDIEQAAAPLRRVVMPRRSTFWYEEEKDTDLITNEDGEDDFHENDIMSLGHGKLEEHREFREYARIAVWEMPLLSKYAKPFVPPTSEEVLRFRYTTYMGEFHPADRKVVVEFCPKDLRDLSEVQQRKLMKLAGPRYNPEKDIIKMSCEKFEHQAQNKRYLGDLIEKMIAAAKDPKDTFEDIPLDTRHHTFTKKISFPKEWLLTEERKKELEAARQQALLKDAEKVVQGALVDGADVVKQYLESGAAEALHAVPVMAGRGGKALPGGKGGKMQRSKR |
| uL11m | G | 158 | Neurospora Crassa | MSKAAKGGAGGVEQVVKLIVGAGQASPSPPVGPALGSKGIKSMDFCKEFNARTAHINTGTPMPVRVTVRPDRSFHFDVRTPHTSWLLLNAAEAPIGKGGKRKGASNPGKEVVGTVSLKHVYEIAKIKQSELRLSGLPLEGLCRAVIYQARSIGINVIP |
| 37S ribosomal protein mrp10, mitochondrial | 11 | 90 | Neurospora Crassa | MPNKPIRLPPLKQLRVRQANKAEENPCIAVMSSVLACWASAGYNSAGCATVENALRACMDAPKPAPKPNNTINYHLSRFQERLTQGKSKK |
| DUF1713 domain-containing protein | 22 | 344 | Neurospora Crassa | MIPQSVRRVVAAAPQSPVVSSLAASSAPRAGASYILSSYQPNALQKRRYSSSKPSSPDDGSSRAFAARASVPAAGTSKTPGEKRKRKAKEPVMPPLPSVPSTRHIKDEALALSTFFALHRPISVTQLLPKTVTEESFAEIFNHRKGHKATDVLSTLSQAVHDLESPMSGLRLSDNDVEDGSTKISLKHPDGTESDVYFQLNSMSGHFLPFNPPPPPEPIAEVDEAAAEAEASAAIAEEIAATAEQEPETRVYKAVVTIEETRDTNGQYKIMAHSPQLVEDDAVQPRSFLERLALRQIRYEEARQQQGIMHAISVRRQKKLKIKKKKYKKLMRRTRNERRKQDRL |
| Protein FYV4, mitochondrial | 33 | 236 | Neurospora Crassa | MKSSLRIQSTLGLLFRPCAVSAPATAPGLNAHARWAHKTAAQLPLIPKPTPFVPDVPTFLTLIGRDLKQHADKFPTWEALFTLTTDQLRELGVEPPRARRYLLRWRQRFREGKFGIGGDLKHVENGVAYLKIHEKEASPTRTSRRVVNVPANQHVEEVSEGERVKVKGYKVKGVSTIVGPYALPVQKGVAKLAVTEGMWEDKRGHKVDGGERRRAEVRFKRGVAERKALREKMGFY |
| Manganese and iron superoxide dismutase | 44 | 310 | Neurospora Crassa | MIGSMGLRIPRATSSLLGRAVNAVATNQSAVAGASIAAQRRWQHYLMPLRDNFEQEGIRNFLSPGSVNMAYTEYQTFILEKLNALVVGTDFEQKDTKSIVLATARDPELAHVFNHASMAHNNHFFFDHLSPVPVKMGDKLFYHINENFGSVDTLRDEMIGTAVSMFGPGFVWLVRTQLPGQPVALRVMATYLAGSPYPGAHWRRQEMDAQTSIGSSPQGLSNGQRFFERSAAGFKGNKLEPTAPGGTDLIPILCLNTWEYAWLREYGTGVGGMGGKLAYAQSWWNMIDWAKVEEEARLETRILTGGDSSV |
| Manganese and iron superoxide dismutase | 55 | 310 | Neurospora Crassa | MIGSMGLRIPRATSSLLGRAVNAVATNQSAVAGASIAAQRRWQHYLMPLRDNFEQEGIRNFLSPGSVNMAYTEYQTFILEKLNALVVGTDFEQKDTKSIVLATARDPELAHVFNHASMAHNNHFFFDHLSPVPVKMGDKLFYHINENFGSVDTLRDEMIGTAVSMFGPGFVWLVRTQLPGQPVALRVMATYLAGSPYPGAHWRRQEMDAQTSIGSSPQGLSNGQRFFERSAAGFKGNKLEPTAPGGTDLIPILCLNTWEYAWLREYGTGVGGMGGKLAYAQSWWNMIDWAKVEEEARLETRILTGGDSSV |
| mS45 | 66 | 348 | Neurospora Crassa | MPPRIPNAPSSLLLQSSACSGSSSRCTASRLPTWASSCSSSSPQSSQPTTHQQQCSSFSTTAPAHVQSVRRQKMFSWLDKKGSAYKEHTRQGPNLLGGQGKDGLAVPFPNNPYFKSQPVLSEGSREIIYQDVMEKGLPIKAVSAKYNVDVRRVAAVIRLKEIEKRWIKEYKPLARPYARAVMKMLPQTVLGGPDQKPHESINDVHVHSYTTQQLFVPVSESREFTREDAAKAFGDHILPVDKKLRVPELIEFQKDLLKEVPLQEANRKFLNATAASEAKIAEREAKRRQAVEDAITRVKTDRFEFRFQEFNAENVGHDGRDRNAVGWRYGVPFPDRKRSQIKIPTKVE |
| mS46 | 77 | 414 | Neurospora Crassa | MNRQVVTSTLGRRGVASTILNAQQQQRPFSSTTTRCAAEDDSKKPAAAPSTPRAAAPGPISASRQKSEAAVGKLTQLRGSFTSLTNDNSFHKTLPAGARDARRLAAAPIAGKGAGAGAVAPLGGGGGASGAPKVINVRSLKGTLGSRGSNNIPGAVAPGAALRPRFAAGPGAAAGRPRFGAAASPGAGPTGAARRPPFGARRARPAGDKKRSGGSGDKRPRGDDYDAPPTEEEKAFLRGLEQGKVTEYVPKLTPDTLLGYGPPVATDAALGKVESAMRTMRILGGGLPFNDQSGVTSDPTAIKHRYVHEKKPVFFSSVEEKEWVRESLDKFAVSEGPEKKTKQKILETSVLGKYEEPKYVESLTETVKMVEKYQGGTFSYAPSDADKFNKKLNQLLAAGLPRAAPAPAQAQKKA |
| 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial | 88 | 508 | Neurospora Crassa | MLVSKSIASRAGLASAVASRSCRPSFTAMPLRAKVLGQQAPISTQAAAELFKPVEGDEPEDVLFNSLYNLRSVELNRPAKYNALNGSMIRKIAPRLLEWERSDMANVIVIKGSGEKAFCAGGDVAALAKQNAEGPEGVKKSVDYFGLEYKLNHLISTYTRPYVAFLDGITMGGGVGLSIHAPFRIATERTVFAMPETKIGFFPDVGASFFLPRMPGQVGPYLGLTSALLKGVQVYYAGIATHYLHSSSLPALESRLAELTPRDYWTIEQRLSVINDTIEEFSTGVPYDENIEIGGKIRLAIDRCFKYDKIDEIIAALKEEAAEGAKGGVQSWAKNTLEELTQRSPTSLHVTLRQMRLGKSWGIAHTFKREHQMAAKFMKSHDFNEGVTALLIDKGANGPAKWKPASLDEIPPGANISEDYFRNDPEVPVLELLNDRSYMQYPYNKFGLPNDYDVKEAIEKGNFTREKLIDHFVETRRGKQGVREAVSDVLDRMAVRSKGTEHVQWKKE |
| IF1 | 00 | 95 | Neurospora Crassa | MLRTTVSKLARPTVSRAFATTSRALAGETGAPPKTGGPGDAFQRREKANEDFAIRQREKEKLLELKKKLAEQQKHLKTLSDHIDEITREQGGERN |
| IF1 | 99 | 95 | Neurospora Crassa | MLRTTVSKLARPTVSRAFATTSRALAGETGAPPKTGGPGDAFQRREKANEDFAIRQREKEKLLELKKKLAEQQKHLKTLSDHIDEITREQGGERN |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 16S rRNA | aa | 1864 | NA | GAUGUAAUAAAAAAAAUUUUUUUUAAUUUUAUAUUACAUCAAUAAAAAUAGAUGAGUUUGGUGAUGGCUCUGAUUGAACACUGUCCAAAUACUUGACACAUGCUAAUCGAACGUUUAAUUUUGGCCUAAGAAAGGGGUUUCAUCGUGGCUUAAGCUAAGGGGUUUAUUGUGGCUUAAGCUAAGGUUUAAUCUUUGACUUAAGCGGGUGUUUUAGGGGAACUUGUGCCCCUAAAACCUCUUAAUUAAAAGUGGUGUACAGGUGAGUAUAAUAUUUUUUCGCUUAACUUAAAGUGAAGGCAAAUCCUUCAUAUUGCAAAAGGAUAUCUUAGGCACCUGUUGAAAGGGGCCUACUUAUAUUAUAUCCGCUUUAAGAGGAUGAGAAAAGUUUCAGAGAUAGGUAGUUGUUAAGGUCAUGGCUUAACAAGCCAAUAAUUCUCUUAGUCGAAGCUGAAAAGGCUGAUCGACCACAUUGGGAAUGAAAAAAUCCCAAGGCAAAUAGGUACAGCAGUGAGGAAUCUUGGUCAAUGGGCCCACGCCUGAACUGGUAACUUGGAGGAAUGAGGGGUCAACUUUGCAAAUGGAUGAGUGAUCGUUAGAAGAUCCUUAGUCCCCUGGUCUUCUUGACACAUGAGGUAUAUACUUCUAGUCCAUAUUGGGGGGAGACUCCACGUCGAUUUAUCGAGUAAAAUUCUGUAUACAUAUUGAUAAUGACAAUAUGUACAUUUGUCUUGACUAAUUACGUGCCAGCAGUCGCGGCAAUACGUAAGAGACUAGUGUUAAUCAUCAUAAAUAGGUUUAAAGGGUACUCAGACGGAAAAAUUCGCCCAAAUAUAGGGGACAAUUUUUCUAGAGUUUUAUGUAAGAAGGUCGUACUCUAGAGUGGAGAGAUAAAAUUCUGUGAUACCUAGGGGACGGGUAAAGGCGAAGGCAAUCUUUUAUGUAAAAACUGACGUCGAAGGACGAAGGCAAAGGGAACAAAAAGGAUUAGAUACCCCAGUAGUCUUUGCAGACAAUUAUGAAUGCCAUAGGUUAGAUUUUUAAUUUAGUCUAUAAAUGAAAGUGUAAGCAUUUCACCUCAAGAGUAAGGCGGCAACGCAGGAACUGAAAUCACUAGACCGUUUCUGACACCAGCAAUGAAGUAUGUUAUUUAAUUCGGUGACCCACGAAAAACCUUACCACAAUUUGAAUAUUAAUAAUAAUGAUAUUAUUUUUUAUGCUUGAUAUGGCAAGCACUCAAUUUUCCCCUCCCCGUAGGUUUGCCGCGGGGGGGGAGAAAAAAGAAAAAUAAUGGAUAAUAUAGUAAAUACCAUAUUCCAACUAUAUUUAAUUAUUAAUACAAGUGUUGCACGGCUGUCUUCAGUUGAUGUUGCGAAACUGUGGUUCGUUCCAUGGAAUUAACGUAAACCCUUGCUUUAUUUGUAAAUAUUAUAAAGCAGUUCACCUUUAUAUAGGAAAUGAUAAAAGGGAUCAAGACAAGUCAUCAUGGCCUAAAUAUUGUGGGCUAUAGACGUGCCACAUUUUCCUAAACAAAGAGAUGCAAAAAUGUGAAUUUUAGCUAAUCUCAAAAAAUAGGAUAAAAAUAUACAAGGAUUGUAGUCUGAAAUUCGACUGCAUGAAUAAGAAAUUGCUAGUAAUCGUGAAUCACCAUGACACGGUGAAUAUUCCCUCGGAUUGGUACUAACCACUCGUCACAUGCUGAAAGGAGUGCGUGCAAUAAGUUUGCUUUUCUGUUAUAAGUAAGUAGACAUAUAGGUUUAGAUGUUAUAAUAGGAUCCUUCGUAUGCGCGGCUCUGAUUAGUGUUAAGUCGAAAUACGGUUCGUGUAGUGGAAGUUGCACGGGACUUAUCAAUGUUGAACAAUACGA |
| P-site-tRNA | bb | 73 | NA | GGCUGAGUAGCUCAAAGUAGAGCAUACCGUUCAAAACGGUAAUGAAUGUGUUCGAUCCACAGCUCAGCCACCA |
| mRNA | ee | 11 | NA | AAUAUUUUUGU |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2020-04-30 Deposition Author(s): Amunts, A. , Itoh, Y. , Naschberger, A.