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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

6VO1

Bg505 sosip.v5.2 in complex with rhesus macaque fab rm20j

PDB DOI: 10.2210/pdb6vo1/pdb

Classification: VIRAL PROTEIN
Organism(s): Human Immunodeficiency Virus 1 , Macaca Mulatta

Deposited: 2020-01-29
Deposition Author(s): Cottrell, C.A. , Ward, A.B.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.88 Å

6vo1
Literature

Bg505 sosip.v5.2 in complex with rhesus macaque fab rm20j

Cottrell, C.A. , Ward, A.B.

Primary Citation of Related Structures: 6VO1


Proteins
Molecule Chains Sequence Length Organism Sequence
Envelope glycoprotein gp120 A 475 Human Immunodeficiency Virus 1 , Macaca Mulatta AENLWVTVYYGVPVWKDAETTLFCASDAKAYETKKHNVWATHCCVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQWFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVG
Envelope glycoprotein gp120 C 475 Human Immunodeficiency Virus 1 , Macaca Mulatta AENLWVTVYYGVPVWKDAETTLFCASDAKAYETKKHNVWATHCCVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQWFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVG
Envelope glycoprotein gp120 D 475 Human Immunodeficiency Virus 1 , Macaca Mulatta AENLWVTVYYGVPVWKDAETTLFCASDAKAYETKKHNVWATHCCVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQWFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVG
Envelope glycoprotein gp41 B 153 Human Immunodeficiency Virus 1 , Macaca Mulatta AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPECQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Envelope glycoprotein gp41 E 153 Human Immunodeficiency Virus 1 , Macaca Mulatta AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPECQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Envelope glycoprotein gp41 F 153 Human Immunodeficiency Virus 1 , Macaca Mulatta AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPECQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
RM20J Heavy chain Fab H 118 Human Immunodeficiency Virus 1 , Macaca Mulatta QVQLQESGPAVVQPSETLSLTCAVSGGSISGGYGWTWIRQAPGKALEWIGNIYGHSGSTNYKSSLKRRLTISTDTSKNQFSLKLTSVTAADTAVYYCARWSTADFDYWGQGVLVTVSS
RM20J Heavy chain Fab G 118 Human Immunodeficiency Virus 1 , Macaca Mulatta QVQLQESGPAVVQPSETLSLTCAVSGGSISGGYGWTWIRQAPGKALEWIGNIYGHSGSTNYKSSLKRRLTISTDTSKNQFSLKLTSVTAADTAVYYCARWSTADFDYWGQGVLVTVSS
RM20J Heavy chain Fab I 118 Human Immunodeficiency Virus 1 , Macaca Mulatta QVQLQESGPAVVQPSETLSLTCAVSGGSISGGYGWTWIRQAPGKALEWIGNIYGHSGSTNYKSSLKRRLTISTDTSKNQFSLKLTSVTAADTAVYYCARWSTADFDYWGQGVLVTVSS
RM20J Kappa light chain L 107 Human Immunodeficiency Virus 1 , Macaca Mulatta DIVMTQSPSSLSASVGDTVTITCRASQDITNDLAWYQQKPGKAPKALIYYASNLESGVPSRFSGSGAGTDFTLTISSLQPEDFALYYCQQHNNYPLTFGPGTKVDIK
RM20J Kappa light chain J 107 Human Immunodeficiency Virus 1 , Macaca Mulatta DIVMTQSPSSLSASVGDTVTITCRASQDITNDLAWYQQKPGKAPKALIYYASNLESGVPSRFSGSGAGTDFTLTISSLQPEDFALYYCQQHNNYPLTFGPGTKVDIK
RM20J Kappa light chain K 107 Human Immunodeficiency Virus 1 , Macaca Mulatta DIVMTQSPSSLSASVGDTVTITCRASQDITNDLAWYQQKPGKAPKALIYYASNLESGVPSRFSGSGAGTDFTLTISSLQPEDFALYYCQQHNNYPLTFGPGTKVDIK
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2020-01-29
Deposition Author(s): Cottrell, C.A. , Ward, A.B.