Cryoem-derived model of na-63 fab in complex with n9 shanghai2
PDB DOI: 10.2210/pdb6u02/pdb
Classification: VIRAL PROTEIN/IMMUNE SYSTEM Organism(s): Homo Sapiens , Influenza A Virus (A/Environment/Shanghai/S1439/2013(H7N9))
Deposited: 2019-08-13 Deposition Author(s): Turner, H.L. , Ward, A.B. , Zhu, X.
Cryoem-derived model of na-63 fab in complex with n9 shanghai2
Turner, H.L. , Ward, A.B. , Zhu, X.
Primary Citation of Related Structures: 6U02
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Neuraminidase | A | 429 | Homo Sapiens , Influenza A Virus (A/Environment/Shanghai/S1439/2013(H7N9)) | LKPGCNCSHSQPETTNTSQTIINNYYNETNITNIQMEERTSRNFNNLTKGLCTINSWHIYGKDNAVRIGESSDVLVTREPYVSCDPDECRFYALSQGTTIRGKHSNGTIHDRSQYRALISWPLSSPPTVYNSRVECIGWSSTSCHDGKSRMSICISGPNNNASAVVWYNRRPVAEINTWARNILRTQESECVCHNGVCPVVFTDGSATGPADTRIYYFKEGKILKWESLTGTAKHIEECSCYGERTGITCTCRDNWQGSNRPVIQIDPVAMTHTSQYICSPVLTDNPRPNDPNIGKCNDPYPGNNNNGVKGFSYLDGANTWLGRTISTASRSGYEMLKVPNALTDDRSKPIQGQTIVLNADWSGYSGSFMDYWAEGDCYRACFYVELIRGRPKEDKVWWTSNSIVSMCSSTEFLGQWNWPDGAKIEYFL |
Neuraminidase | B | 429 | Homo Sapiens , Influenza A Virus (A/Environment/Shanghai/S1439/2013(H7N9)) | LKPGCNCSHSQPETTNTSQTIINNYYNETNITNIQMEERTSRNFNNLTKGLCTINSWHIYGKDNAVRIGESSDVLVTREPYVSCDPDECRFYALSQGTTIRGKHSNGTIHDRSQYRALISWPLSSPPTVYNSRVECIGWSSTSCHDGKSRMSICISGPNNNASAVVWYNRRPVAEINTWARNILRTQESECVCHNGVCPVVFTDGSATGPADTRIYYFKEGKILKWESLTGTAKHIEECSCYGERTGITCTCRDNWQGSNRPVIQIDPVAMTHTSQYICSPVLTDNPRPNDPNIGKCNDPYPGNNNNGVKGFSYLDGANTWLGRTISTASRSGYEMLKVPNALTDDRSKPIQGQTIVLNADWSGYSGSFMDYWAEGDCYRACFYVELIRGRPKEDKVWWTSNSIVSMCSSTEFLGQWNWPDGAKIEYFL |
Neuraminidase | E | 429 | Homo Sapiens , Influenza A Virus (A/Environment/Shanghai/S1439/2013(H7N9)) | LKPGCNCSHSQPETTNTSQTIINNYYNETNITNIQMEERTSRNFNNLTKGLCTINSWHIYGKDNAVRIGESSDVLVTREPYVSCDPDECRFYALSQGTTIRGKHSNGTIHDRSQYRALISWPLSSPPTVYNSRVECIGWSSTSCHDGKSRMSICISGPNNNASAVVWYNRRPVAEINTWARNILRTQESECVCHNGVCPVVFTDGSATGPADTRIYYFKEGKILKWESLTGTAKHIEECSCYGERTGITCTCRDNWQGSNRPVIQIDPVAMTHTSQYICSPVLTDNPRPNDPNIGKCNDPYPGNNNNGVKGFSYLDGANTWLGRTISTASRSGYEMLKVPNALTDDRSKPIQGQTIVLNADWSGYSGSFMDYWAEGDCYRACFYVELIRGRPKEDKVWWTSNSIVSMCSSTEFLGQWNWPDGAKIEYFL |
Neuraminidase | J | 429 | Homo Sapiens , Influenza A Virus (A/Environment/Shanghai/S1439/2013(H7N9)) | LKPGCNCSHSQPETTNTSQTIINNYYNETNITNIQMEERTSRNFNNLTKGLCTINSWHIYGKDNAVRIGESSDVLVTREPYVSCDPDECRFYALSQGTTIRGKHSNGTIHDRSQYRALISWPLSSPPTVYNSRVECIGWSSTSCHDGKSRMSICISGPNNNASAVVWYNRRPVAEINTWARNILRTQESECVCHNGVCPVVFTDGSATGPADTRIYYFKEGKILKWESLTGTAKHIEECSCYGERTGITCTCRDNWQGSNRPVIQIDPVAMTHTSQYICSPVLTDNPRPNDPNIGKCNDPYPGNNNNGVKGFSYLDGANTWLGRTISTASRSGYEMLKVPNALTDDRSKPIQGQTIVLNADWSGYSGSFMDYWAEGDCYRACFYVELIRGRPKEDKVWWTSNSIVSMCSSTEFLGQWNWPDGAKIEYFL |
Fab-63 Light Chain | L | 215 | Homo Sapiens , Influenza A Virus (A/Environment/Shanghai/S1439/2013(H7N9)) | DIVMTQSPSSLSASVGDRVTITCRASQSISTYLNWYQQKPGKAPKLLIYAASSLQGGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPLYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
Fab-63 Light Chain | C | 215 | Homo Sapiens , Influenza A Virus (A/Environment/Shanghai/S1439/2013(H7N9)) | DIVMTQSPSSLSASVGDRVTITCRASQSISTYLNWYQQKPGKAPKLLIYAASSLQGGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPLYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
Fab-63 Light Chain | F | 215 | Homo Sapiens , Influenza A Virus (A/Environment/Shanghai/S1439/2013(H7N9)) | DIVMTQSPSSLSASVGDRVTITCRASQSISTYLNWYQQKPGKAPKLLIYAASSLQGGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPLYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
Fab-63 Light Chain | I | 215 | Homo Sapiens , Influenza A Virus (A/Environment/Shanghai/S1439/2013(H7N9)) | DIVMTQSPSSLSASVGDRVTITCRASQSISTYLNWYQQKPGKAPKLLIYAASSLQGGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPLYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
Fab-63 Heavy Chain | H | 221 | Homo Sapiens , Influenza A Virus (A/Environment/Shanghai/S1439/2013(H7N9)) | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLDWVANIKQDGSEKYYVDSVKGRFTISRHNAKNSLYLQMNSLRAEDTAVYYCASSTAAEFFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC |
Fab-63 Heavy Chain | D | 221 | Homo Sapiens , Influenza A Virus (A/Environment/Shanghai/S1439/2013(H7N9)) | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLDWVANIKQDGSEKYYVDSVKGRFTISRHNAKNSLYLQMNSLRAEDTAVYYCASSTAAEFFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC |
Fab-63 Heavy Chain | G | 221 | Homo Sapiens , Influenza A Virus (A/Environment/Shanghai/S1439/2013(H7N9)) | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLDWVANIKQDGSEKYYVDSVKGRFTISRHNAKNSLYLQMNSLRAEDTAVYYCASSTAAEFFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC |
Fab-63 Heavy Chain | K | 221 | Homo Sapiens , Influenza A Virus (A/Environment/Shanghai/S1439/2013(H7N9)) | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLDWVANIKQDGSEKYYVDSVKGRFTISRHNAKNSLYLQMNSLRAEDTAVYYCASSTAAEFFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC |
Method: ELECTRON MICROSCOPY
Deposited Date: 2019-08-13 Deposition Author(s): Turner, H.L. , Ward, A.B. , Zhu, X.