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FASTA Sequence PDB Format mmCIF Format
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6RDD

Cryo-em structure of polytomella f-atp synthase, primary rotary state 2, monomer-masked refinement

PDB DOI: 10.2210/pdb6rdd/pdb

Classification: PROTON TRANSPORT
Organism(s): Polytomella Sp. Pringsheim 198.80

Deposited: 2019-04-12
Deposition Author(s): Klusch, N. , Kuhlbrandt, W. , Murphy, B.J. , Yildiz, O.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.2 Å

6rdd
Literature

Cryo-em structure of polytomella f-atp synthase, primary rotary state 2, monomer-masked refinement

Klusch, N. , Kuhlbrandt, W. , Murphy, B.J. , Yildiz, O.

Primary Citation of Related Structures: 6RDD


Proteins
Molecule Chains Sequence Length Organism Sequence
ASA-10: Polytomella F-ATP synthase associated subunit 10 0 82 Polytomella Sp. Pringsheim 198.80 MSYSAYFAKAGFQFPAGLSALVAGIVALNVCTGRPTKGTKEISNAEYNATPIGYLQSPDQHPTAFPKVPGMKDVHGSPHHHH
Mitochondrial ATP synthase subunit ASA9 9 97 Polytomella Sp. Pringsheim 198.80 MAVTSFLGKAFEKYFYDFSAYEQFGLNRFLSSKGQYVALRHVGFVMVGVNVLLAANFPFNPPFPTIGMCPAGWEGTWVCQADKAKALEMYKEWKKSN
Mitochondrial ATP synthase subunit 6 M 327 Polytomella Sp. Pringsheim 198.80 MSVLSSVSMGSRIGSSLLGRSSAYLAQCGFSTRSNLNGSIDTSSSVFQALSSDNENKPAASPLNVKLPGMSCSSILLPKTSRIAVPFGNQTMAMSSVRDVKTGSLPTNFLTGVYRFWRSQNPAEKPHDPVNDRLLPAVVDASDKRASIGTWATTFFCTIISCNLLGLMPFNEAPTSGLGFATGLGVSVWATATILGLSKTGFKFPGHFIPGGTPWPMAFIFVPLETISYTFRAVSLGVRLWVNMLAGHTLLHILTGMALALPFSLGFFSMVPATFGVCCLLSALVGLEYLVAVLQSGVFSILSTVYVGEFNHDKFIGPAAKIVKKIH
Mitochondrial ATP synthase subunit OSCP P 229 Polytomella Sp. Pringsheim 198.80 MLARVASVALRRAEGKIMPQMVRALSVSAASAAQAELKLPTAPLQLSGTSAQIATLLWQVAAKENQLDKVQDELYQFIELFKQHSELRRLATDPFVPTLVRTKIISSVLKDSGASEITKKLFEALADEGALSALLEVTVNYEELMLAHKKEVYCTVITAEPLDKLERVELTKKAEKFVDAGFKLVMQEKIDKKLLGGFVIEFSDRRVDMSTAKKVEEFNNFVNKLVLSI
ATP synthase subunit alpha T 562 Polytomella Sp. Pringsheim 198.80 MRSPAAFVARSGLFKASLGQSNWAQKAEQMMASVTRTFAADAKALDELRKPKFSSKYLIQHVSQKLIPAVKEWEKSYQPPVIHLGRVLSVGDGIARVYGLKSVQAGELVCFDSGVKGMALNLQADHVGVVVFGNDSVIHQGDLVYRTGQIVNVPIGPGTLGRVTDGLGQPIDGKGPLTNVRSSLVEVKAPGIIARQSVREPLFTGVKAVDALVPIGRGQRELIIGDRQTGKTAVAIDAIIHQKNCNEQVPKAQRVYCVYVAVGQKRSTVAQLVKLFTQTGAMRYTIMVSATASDAAPLQFLAPYSGCAMAEYFRDTGKHGLIIYDDLSKQSVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKLSKELGGGSLTAFPVIETQAGDVSAYIATNVISITDGQIFLETELFYKGIRPALNVGLSVSRVGSAAQFPGMKQVAGTLKLELAQYREVAAFAQFGSDLDAATQYVLERGARLTEMLKQKQFAPIPIERQTVAVYAATKGFLDKVRVQDIVAAEEAVISQVNPAVFKILKANGKITPALDAHLKAELRKVKLPGA
ATP synthase associated protein ASA1 1 618 Polytomella Sp. Pringsheim 198.80 MMRAAQKAKQELPATVLTQTRSYLAPLRSDFTEEITAPKVASASNLVNEWNNKKQATENLMKLLQAYKDIGDAKSEPLLKNHNPRTFEDRDYPVPDFRTQNLKAGDVPKFFDTVISTRASAAIASKDKFWAGRKTEAEAASAKASAAFPRVAVPEWKKGKTVSIENLNTVTDKYAAALVPKRKLALPVLPEGVKKAVEDFAASVGQAKNASEVSELLAKSLAEKAVVTEGGKVVEGFSYVSKAVAAKVIATRRAEVHERLLKLWAKRLLVSPELAIVPLNEFDAQLASKFEGISPKYQELLSAVAQGNKTFAQRLNSSPAFSSFLLKREKAESEVPPSELELEAAQKAAELEDPEVALRTLLGPQMEALGASDLLLSEQIRVITEHRYTPDRLQYKEGMKLADKIAAQEAALKEELKVIYGDNVDVKHFQASPRTPVQQLFDSLKNAAANKERAAKEAAAAASPYLAYAVTKKQEVQADPSNIPFDEVLYPQLSEELLELELSDIREDEIALEKAEEEELWLLTLTQQFKHIQKHFGIDLPHSVVAHMDPLLIKKIDWETTNALEDFDITLDDMGAEDAKEQWGAENLSHHFLPLIRYRRDLARKNGDRYGPDLVNGN
Mitochondrial ATP synthase subunit ASA2 2 441 Polytomella Sp. Pringsheim 198.80 ENDVPAILKEIDSLVSREAVSAKEVSDAAVALTYLQVKANRRLWGKVLEKAGAAQDYDAASLTNLLWAINTGGVEHFKTVAELAGPAVSLLPSLSPVQLSIVVEALGGAGVKNYELYNKASAVVVSKIGEFKPAEIARVLYGVAFGGVNDVALAKAAGKVFASTEVDSRTAAQALYALAKLGRADKATVDALLKSFKKGTESASDAAAASFALGSLSFKAEKAIVDALKASAGDLAPAQAVEAAYGLALSGATDAEAFKALFGVVAPAIEKAPDALEVSSLAQLHVASTISGAKLPAAVGSFVAKAFGLAADAARLKRSSAESALVADVAAATAVAFGAQYRPEVASAVASYVKTAPDGSVLDIAITKGDAKVLVQAVPSSLLTSTTPAKPLGHVAAYSKVREAQGYAVAVVPANEFEALPDQKAKAQYVLAAIKKVAPSF
Mitochondrial F1F0 ATP synthase associated 32 kDa protein 3 325 Polytomella Sp. Pringsheim 198.80 MRQASRLALSIRQAGNVEAASAVPAMTRQFSAPGSHEHHETPLSKVMPTVVSIPRKVACLALGATKKVVCGLASSGPSQNLVSTFANKVIVEENLVNVAEIDVPFWSYWLSSAGFTSKDAFVKFAEAVKPKVAALSTSDITNLTVAFKRANYYDKDLFTGIEANVSANFTKFETEQLLQIVATFDAFNHSSVAFLDDVADSITYCNHYLAPVRAGADELATLLTYYAKNGHERADLLATVARGFSEVSLGKLSAAQRKDTVLSALKAFQTFGFYPESIEAVIGAALVSPAEYSAEELKEVEAVKVAAENALGGEFVLIQEGAHGH
Mitochondrial ATP synthase associated protein ASA4 4 294 Polytomella Sp. Pringsheim 198.80 ATEPAVSKKEVLYFLSSKDAESSTAVKSYLKSLYAGAQVEATETDASELIAQLEKKYLSAQVVEPGVHNIALPLGESGSAPVKRYAAELFNLGAQAGFECPFIEVSKKFGQETATSETVKDVLNKTKSYVSADYNAALNEVLSSVEAEINGPVLFDGKTEGFKKFAAKAKAVAVSRGLPADTILAYCAGSANEDAADKVSKEFFTWFESAYTADAAAEVKAIEAEAASILDRHLAKPVAQIRKEQASAYASLLKRAETAKGAKWAEKYLEDVKAVQWFDASVAEAPASGPKVAA
Mitochondrial F1F0 ATP synthase associated 14 kDa protein 5 123 Polytomella Sp. Pringsheim 198.80 MKLLPESLQQEAATAAVVASWVLWHLDTQLLPTIMREHKLHACWAAAAKRYNEKLFKLNPSYDRVLSLPAVSKNQVLENVFHTAPKAPVEHLEKMVSANSKVYDALNLQSKRVLIWQVKPALF
Mitochondrial ATP synthase subunit ASA6 6 151 Polytomella Sp. Pringsheim 198.80 MMLRTLTRSSAVAGQAVRLFKTSAAAAEGNSVAGIIKSVNETSGANLLSSLKTIKAQAAPIYPAAASSTGYSTQAKIALFGALSWILYRADGQSKAHEWIVDLNLNVLQAAWLISFSSLIPFRAVYFAFRGMAPATASTLNGLKTFSSISL
Mitochondrial ATP synthase associated protein ASA7 7 190 Polytomella Sp. Pringsheim 198.80 MSSVRAGVEAGRRDLTTFTFSGLQDAPVAALSGSIKLNVAAKAGKAEVTVAAGAAKAATQVSAAALRKLSGSKISLAEVARISVLHSSIQNYLLSLSNERYQLLSQWPDFTTMYGKDFYYRAHPEDLKKFYDAADEYYKLYETVTEFDSLSALASQVVPNYAARRRSTVHPAIGSTVADGAFTNFLLSKQ
Mitochondrial ATP synthase subunit ASA8 8 89 Polytomella Sp. Pringsheim 198.80 MVLGEVYLKDILRTPPTGAIPANVPHPFQTSFYTYATKKLIPRHWYLLGGFTFTITLYGILDGLRDSGKKKAYDEAIHAGKTPYTAGGH
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2019-04-12
Deposition Author(s): Klusch, N. , Kuhlbrandt, W. , Murphy, B.J. , Yildiz, O.