6R64
N-terminal domain of modification dependent ecokmcra restriction endonuclease (neco) in complex with c5mcgg target sequence
PDB DOI: 10.2210/pdb6r64/pdb
Classification: HYDROLASE Organism(s): Escherichia Coli K12 , Synthetic Construct
Deposited: 2019-03-26 Deposition Author(s): Bochtler, M. , Czapinska, H. , Sasnauskas, G. , Slyvka, A. , Zagorskaite, E.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.64 Å
N-terminal domain of modification dependent ecokmcra restriction endonuclease (neco) in complex with c5mcgg target sequence
Bochtler, M. , Czapinska, H. , Sasnauskas, G. , Slyvka, A. , Zagorskaite, E.
Primary Citation of Related Structures: 6R64
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 5-methylcytosine-specific restriction enzyme A | A | 152 | Escherichia Coli K12 , Synthetic Construct | GHHHHHHEFMHVFDNNGIELKAECSIGEEDGVYGLILESWGPGDRNKDYNIALDYIIERLVDSGVSQVVVYLASSSVRKHMHSLDERKIHPGEYFTLIGNSPRDIRLKMCGYQAYFSRTGRKEIPSGNRTKRILINVPGIYSDSFWASIIRG |
| 5-methylcytosine-specific restriction enzyme A | B | 152 | Escherichia Coli K12 , Synthetic Construct | GHHHHHHEFMHVFDNNGIELKAECSIGEEDGVYGLILESWGPGDRNKDYNIALDYIIERLVDSGVSQVVVYLASSSVRKHMHSLDERKIHPGEYFTLIGNSPRDIRLKMCGYQAYFSRTGRKEIPSGNRTKRILINVPGIYSDSFWASIIRG |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(*TP*CP*AP*CP*(5CM)P*GP*GP*TP*TP*C)-3') | c | 10 | NA | TCACCGGTTC |
| DNA (5'-D(*TP*CP*AP*CP*(5CM)P*GP*GP*TP*TP*C)-3') | e | 10 | NA | TCACCGGTTC |
| DNA (5'-D(*GP*AP*AP*CP*(5CM)P*GP*GP*TP*GP*A)-3') | d | 10 | NA | GAACCGGTGA |
| DNA (5'-D(*GP*AP*AP*CP*(5CM)P*GP*GP*TP*GP*A)-3') | f | 10 | NA | GAACCGGTGA |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2019-03-26 Deposition Author(s): Bochtler, M. , Czapinska, H. , Sasnauskas, G. , Slyvka, A. , Zagorskaite, E.