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FASTA Sequence PDB Format mmCIF Format
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6JR1

Crystal structure of the human nucleosome phased with 16 selenium atoms

PDB DOI: 10.2210/pdb6jr1/pdb

Classification: GENE REGULATION/DNA
Organism(s): Homo Sapiens

Deposited: 2019-04-02
Deposition Author(s): Horikoshi, N. , Kagawa, W. , Kujirai, T. , Kurumizaka, H. , Saotome, M. , Urano, K. , Yuzurihara, H.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.4 Å

6jr1
Literature

Crystal structure of the human nucleosome phased with 16 selenium atoms

Horikoshi, N. , Kagawa, W. , Kujirai, T. , Kurumizaka, H. , Saotome, M. , Urano, K. , Yuzurihara, H.

Primary Citation of Related Structures: 6JR1


Proteins
Molecule Chains Sequence Length Organism Sequence
Histone H3.1 A 139 Homo Sapiens GSHMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Histone H3.1 E 139 Homo Sapiens GSHMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Histone H4 B 106 Homo Sapiens GSHMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H4 F 106 Homo Sapiens GSHMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H2A type 1-B/E C 133 Homo Sapiens GSHMSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILEMAGNAARDNKKTRIIPRHLQMAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTESHHKAKGK
Histone H2A type 1-B/E G 133 Homo Sapiens GSHMSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILEMAGNAARDNKKTRIIPRHLQMAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTESHHKAKGK
Histone H2B type 1-J D 129 Homo Sapiens GSHMPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLMLPGEMAKHAVSEGTKAVTKYTSAK
Histone H2B type 1-J H 129 Homo Sapiens GSHMPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLMLPGEMAKHAVSEGTKAVTKYTSAK

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (146-MER) i 146 NA ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCTGAATTCAGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGAATCTGCAGGTGGATATTGAT
DNA (146-MER) j 146 NA ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCTGAATTCAGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGAATCTGCAGGTGGATATTGAT
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2019-04-02
Deposition Author(s): Horikoshi, N. , Kagawa, W. , Kujirai, T. , Kurumizaka, H. , Saotome, M. , Urano, K. , Yuzurihara, H.