6J5I
Cryo-em structure of the mammalian dp-state atp synthase
PDB DOI: 10.2210/pdb6j5i/pdb
Classification: MEMBRANE PROTEIN Organism(s): Sus Scrofa
Deposited: 2019-01-11 Deposition Author(s): Gu, J. , Yang, M. , Yi, J. , Zhang, L.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.34 Å
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| ATP synthase subunit a | A | 226 | Sus Scrofa | MNENLFASFIAPTMMGLPIVTLIIMFPSLLFPTPKRLINNRTISIQQWLIQLTSKQMMAIHNQKGQTWSLMLMSLIMFIGSTNILGLLPHSFTPTTQLSMNLGMAIPLWSATVFTGFRYKTKTSLAHFLPQGTPALLIPMLVIIETISLFIQPVALAVRLTANITAGHLLIHLIGGATLALLNINTMTAFITFTILILLTILEFAVALIQAYVFTLLVSLYLHDNT |
| ATP synthase peripheral stalk-membrane subunit b | B | 209 | Sus Scrofa | PPLPEHGGKVRLGLIPEEFFQFLYPKTGVTGPYVLGTGLILYLLSKEIYVITAETFSAISTIGVLVYIVKKYGASIGAFADKLNEQKIAQLEEVKQASIKQIQDAIDLEKSQQALVQKRHYLFDVQRNNIAMALEVTYRERLHRVYKEIKNRLDYHISVQNMMRQKEQEHMIRWVEKHVVQSISAQQEKETIAKCIADLKLLAKKAQAQ |
| ATP synthase-coupling factor 6, mitochondrial | C | 70 | Sus Scrofa | VQKLFVDKIREYRTKRQTSGGPVDAGPEYQQDLDRELFKLKQMYGKADMNTFPNFTFEDPKFEAVEKPQS |
| ATP synthase subunit beta | D | 480 | Sus Scrofa | QPSPSPKAGAATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAAIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTGHLGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLAEEHS |
| ATP synthase subunit beta | E | 480 | Sus Scrofa | QPSPSPKAGAATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAAIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTGHLGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLAEEHS |
| ATP synthase subunit beta | F | 480 | Sus Scrofa | QPSPSPKAGAATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAAIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTGHLGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLAEEHS |
| ATP synthase subunit gamma | G | 272 | Sus Scrofa | ATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERDLKPARVYGIGSLALYEKADIKVPEDKKKHLIIGVSSDRGLCGAIHSSVAKQIKSEVANLTAAGKEVKIVGVGDKIRGILHRTHSDQFLVTFKEVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNRFRSVISYKTEEKPIFSLDTVASAESMSIYDDIDADVLRNYQEYSLANIIYYSLKESTTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAAL |
| ATP synthase F1 subunit epsilon | I | 48 | Sus Scrofa | VAYWRQAGLSYIRYSQICAKAVRDALKAEFKANAEKTSGSNVKIVKVK |
| Mitochondrial H+ transporting ATP synthase subunit c isoform 1 | K | 72 | Sus Scrofa | IDTAAKFIGAGAATVGVAGSGAGIGTVFGSMIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILF |
| ATP synthase protein 8 | 8 | 67 | Sus Scrofa | MPQLDTSTWFITITSMIMTLFILFQLKISNYSYPASPESIELKTQKHSTPWEMKWTKIYLPLLLPPR |
| Mitochondrial H+ transporting ATP synthase subunit c isoform 1 | L | 72 | Sus Scrofa | IDTAAKFIGAGAATVGVAGSGAGIGTVFGSMIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILF |
| Mitochondrial H+ transporting ATP synthase subunit c isoform 1 | M | 72 | Sus Scrofa | IDTAAKFIGAGAATVGVAGSGAGIGTVFGSMIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILF |
| Mitochondrial H+ transporting ATP synthase subunit c isoform 1 | N | 72 | Sus Scrofa | IDTAAKFIGAGAATVGVAGSGAGIGTVFGSMIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILF |
| Mitochondrial H+ transporting ATP synthase subunit c isoform 1 | O | 72 | Sus Scrofa | IDTAAKFIGAGAATVGVAGSGAGIGTVFGSMIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILF |
| Mitochondrial H+ transporting ATP synthase subunit c isoform 1 | P | 72 | Sus Scrofa | IDTAAKFIGAGAATVGVAGSGAGIGTVFGSMIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILF |
| Mitochondrial H+ transporting ATP synthase subunit c isoform 1 | Q | 72 | Sus Scrofa | IDTAAKFIGAGAATVGVAGSGAGIGTVFGSMIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILF |
| Mitochondrial H+ transporting ATP synthase subunit c isoform 1 | R | 72 | Sus Scrofa | IDTAAKFIGAGAATVGVAGSGAGIGTVFGSMIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILF |
| ATP synthase membrane subunit 6.8PL | U | 42 | Sus Scrofa | XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
| ATPase inhibitor, mitochondrial | J | 83 | Sus Scrofa | SSDTPEGVRSGAGAVRDAGGAFGKKEQADEERYFRARAREQLAALKKHHENEISHHVKEIERLQKEIERHKQSIKKLKNDDDD |
| ATP synthase subunit delta, mitochondrial | H | 132 | Sus Scrofa | GQMSFTFASPTQVFFNGANVRQVDVPTQTGAFGILASHVPTLQVLRPGLVVVHAEDGTTSKYFVSSGSVTVNADSSVQLLAEEAVTLDMLDPGVAKANLEKAQSELLGAADEASRAEIQIRIEANEALVKAL |
| ATP synthase subunit O, mitochondrial | S | 187 | Sus Scrofa | FAKLVRPPVQIYGIEGRYATALYSAASKQNKLEQVEKELLRVAQILKEPKVAASIMNPYVKRSVKVKSLSDMTAKEKFSPLTSNLINLLAENGRLSSTPGVISAFSTMMSVHRGEVPCSVTTASPLDEATLTELKTVLKSFLSKGQILKLEVKVDPSIMGGMIVRIGEKYVDMSAKTKIQKLSRAMR |
Experimental Data
Method: ELECTRON MICROSCOPY