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6EO7

X-ray structure of the complex between human alpha-thrombin and modified 15-mer dna aptamer containing 5-(3-(acetamide-n-yl)-1-propen-1-yl)-2'-deoxyuridine residue

PDB DOI: 10.2210/pdb6eo7/pdb

Classification: HYDROLASE/DNA
Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2017-10-09
Deposition Author(s): Dolot, R.M. , Nawrot, B. , Yang, X.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.24 Å

Literature

X-ray structure of the complex between human alpha-thrombin and modified 15-mer dna aptamer containing 5-(3-(acetamide-n-yl)-1-propen-1-yl)-2'-deoxyuridine residue

Dolot, R.M. , Nawrot, B. , Yang, X.

Primary Citation of Related Structures: 6EO7


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
GA68B2 - MODIFIED HUMAN THROMBIN BINDING APTAMER d 15 NA GGTUGGTGTGGTTGG

Proteins
Molecule Chains Sequence Length Organism Sequence
Prothrombin L 36 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR
Prothrombin H 259 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFGE
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-10-09
Deposition Author(s): Dolot, R.M. , Nawrot, B. , Yang, X.