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FASTA Sequence PDB Format mmCIF Format
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6B48

Cryo-em structure of type i-f crispr crrna-guided csy surveillance complex with bound anti-crispr protein acrf10

PDB DOI: 10.2210/pdb6b48/pdb

Classification: IMMUNE SYSTEM / RNA
Organism(s): Vibrio Nigripulchritudo , Influenza A Virus (A/Malaya/302/1954(H1N1)) , Fischerella Sp. Utex 'Lb 1931'

Deposited: 2017-09-25
Deposition Author(s): Bartesaghi, A. , Earl, L. , Falconieri, V. , Fox, T. , Guo, T.W. , Merk, A. , Patel, D.J. , Rao, P. , Subramaniam, S. , Yang, H.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.6 Å

Literature

Cryo-em structure of type i-f crispr crrna-guided csy surveillance complex with bound anti-crispr protein acrf10

Bartesaghi, A. , Earl, L. , Falconieri, V. , Fox, T. , Guo, T.W. , Merk, A. , Patel, D.J. , Rao, P. , Subramaniam, S. , Yang, H.

Primary Citation of Related Structures: 6B48


Proteins
Molecule Chains Sequence Length Organism Sequence
CRISPR-associated protein Csy1 A 436 Vibrio Nigripulchritudo , Influenza A Virus (A/Malaya/302/1954(H1N1)) , Fischerella Sp. Utex 'Lb 1931' GSMTSPLPTPTWQELRQFIESFIQERLQGKLDKLQPDEDDKRQTLLATHRREAWLADAARRVGQLQLVTHTLKPIHPDARGSNLHSLPQAPGQPGLAGSHELGDRLVSDVVGNAAALDVFKFLSLQYQGKNLLNWLTEDSAEALQALSDNAEQAREWRQAFIGITTVKGAPASHSLAKQLYFPLPGSGYHLLAPLFPTSLVHHVHALLREARFGDAAKAAREARSRQESWPHGFSEYPNLAIQKFGGTKPQNISQLNNERRGENWLLPSLPPNWQRQNVNAPMRHSSVFEHDFGRTPEVSRLTRTLQRFLAKTVHNNLAIRQRRAQLVAQICDEALQYAARLRELEPGWSATPGCQLHDAEQLWLDPLRAQTDETFLQRRLRGDWPAEVGNRFANWLNRAVSSDSQILGSPEAAQWSQELSKELTMFKEILEDERD
CRISPR-associated protein Csy2 B 329 Vibrio Nigripulchritudo , Influenza A Virus (A/Malaya/302/1954(H1N1)) , Fischerella Sp. Utex 'Lb 1931' MAMSVTDPEALLLLPRLSIQNANAISSPLTWGFPSPGAFTGFVHALQRRVGISLDIELDGVGIVCHRFEAQISQPAGKRTKVFNLTRNPLNRDGSTAAIVEEGRAHLEVSLLLGVHGDGLDDHPAQEIARQVQEQAGAMRLAGGSILPWCNERFPAPNAELLMLGGSDEQRRKNQRRLTRRLLPGFALVSREALLQQHLETLRTTLPEATTLDALLDLCRINFEPPATSSEEEASPPDAAWQVRDKPGWLVPIPAGYNALSPLYLPGEVRNARDRETPLRFVENLFGLGEWLSPHRVAALSDLLWYHHAEPDKGLYRWSTPRFVEHAIA
CRISPR-associated protein Csy3 C 344 Vibrio Nigripulchritudo , Influenza A Virus (A/Malaya/302/1954(H1N1)) , Fischerella Sp. Utex 'Lb 1931' MAMSKPILSTASVLAFERKLDPSDALMSAGAWAQRDASQEWPAVTVREKSVRGTISNRLKTKDRDPAKLDASIQSPNLQTVDVANLPSDADTLKVRFTLRVLGGAGTPSACNDAAYRDKLLQTVATYVNDQGFAELARRYAHNLANARFLWRNRVGAEAVEVRINHIRQGEVARAWRFDALAIGLRDFKADAELDALAELIASGLSGSGHVLLEVVAFARIGDGQEVFPSQELILDKGDKKGQKSKTLYSVRDAAAIHSQKIGNALRTIDTWYPDEDGLGPIAVEPYGSVTSQGKAYRQPKQKLDFYTLLDNWVLRDEAPAVEQQHYVIANLIRGGVFGEAEEK
CRISPR-associated protein Csy3 D 344 Vibrio Nigripulchritudo , Influenza A Virus (A/Malaya/302/1954(H1N1)) , Fischerella Sp. Utex 'Lb 1931' MAMSKPILSTASVLAFERKLDPSDALMSAGAWAQRDASQEWPAVTVREKSVRGTISNRLKTKDRDPAKLDASIQSPNLQTVDVANLPSDADTLKVRFTLRVLGGAGTPSACNDAAYRDKLLQTVATYVNDQGFAELARRYAHNLANARFLWRNRVGAEAVEVRINHIRQGEVARAWRFDALAIGLRDFKADAELDALAELIASGLSGSGHVLLEVVAFARIGDGQEVFPSQELILDKGDKKGQKSKTLYSVRDAAAIHSQKIGNALRTIDTWYPDEDGLGPIAVEPYGSVTSQGKAYRQPKQKLDFYTLLDNWVLRDEAPAVEQQHYVIANLIRGGVFGEAEEK
CRISPR-associated protein Csy3 E 344 Vibrio Nigripulchritudo , Influenza A Virus (A/Malaya/302/1954(H1N1)) , Fischerella Sp. Utex 'Lb 1931' MAMSKPILSTASVLAFERKLDPSDALMSAGAWAQRDASQEWPAVTVREKSVRGTISNRLKTKDRDPAKLDASIQSPNLQTVDVANLPSDADTLKVRFTLRVLGGAGTPSACNDAAYRDKLLQTVATYVNDQGFAELARRYAHNLANARFLWRNRVGAEAVEVRINHIRQGEVARAWRFDALAIGLRDFKADAELDALAELIASGLSGSGHVLLEVVAFARIGDGQEVFPSQELILDKGDKKGQKSKTLYSVRDAAAIHSQKIGNALRTIDTWYPDEDGLGPIAVEPYGSVTSQGKAYRQPKQKLDFYTLLDNWVLRDEAPAVEQQHYVIANLIRGGVFGEAEEK
CRISPR-associated protein Csy3 F 344 Vibrio Nigripulchritudo , Influenza A Virus (A/Malaya/302/1954(H1N1)) , Fischerella Sp. Utex 'Lb 1931' MAMSKPILSTASVLAFERKLDPSDALMSAGAWAQRDASQEWPAVTVREKSVRGTISNRLKTKDRDPAKLDASIQSPNLQTVDVANLPSDADTLKVRFTLRVLGGAGTPSACNDAAYRDKLLQTVATYVNDQGFAELARRYAHNLANARFLWRNRVGAEAVEVRINHIRQGEVARAWRFDALAIGLRDFKADAELDALAELIASGLSGSGHVLLEVVAFARIGDGQEVFPSQELILDKGDKKGQKSKTLYSVRDAAAIHSQKIGNALRTIDTWYPDEDGLGPIAVEPYGSVTSQGKAYRQPKQKLDFYTLLDNWVLRDEAPAVEQQHYVIANLIRGGVFGEAEEK
CRISPR-associated protein Csy3 G 344 Vibrio Nigripulchritudo , Influenza A Virus (A/Malaya/302/1954(H1N1)) , Fischerella Sp. Utex 'Lb 1931' MAMSKPILSTASVLAFERKLDPSDALMSAGAWAQRDASQEWPAVTVREKSVRGTISNRLKTKDRDPAKLDASIQSPNLQTVDVANLPSDADTLKVRFTLRVLGGAGTPSACNDAAYRDKLLQTVATYVNDQGFAELARRYAHNLANARFLWRNRVGAEAVEVRINHIRQGEVARAWRFDALAIGLRDFKADAELDALAELIASGLSGSGHVLLEVVAFARIGDGQEVFPSQELILDKGDKKGQKSKTLYSVRDAAAIHSQKIGNALRTIDTWYPDEDGLGPIAVEPYGSVTSQGKAYRQPKQKLDFYTLLDNWVLRDEAPAVEQQHYVIANLIRGGVFGEAEEK
CRISPR-associated protein Csy3 H 344 Vibrio Nigripulchritudo , Influenza A Virus (A/Malaya/302/1954(H1N1)) , Fischerella Sp. Utex 'Lb 1931' MAMSKPILSTASVLAFERKLDPSDALMSAGAWAQRDASQEWPAVTVREKSVRGTISNRLKTKDRDPAKLDASIQSPNLQTVDVANLPSDADTLKVRFTLRVLGGAGTPSACNDAAYRDKLLQTVATYVNDQGFAELARRYAHNLANARFLWRNRVGAEAVEVRINHIRQGEVARAWRFDALAIGLRDFKADAELDALAELIASGLSGSGHVLLEVVAFARIGDGQEVFPSQELILDKGDKKGQKSKTLYSVRDAAAIHSQKIGNALRTIDTWYPDEDGLGPIAVEPYGSVTSQGKAYRQPKQKLDFYTLLDNWVLRDEAPAVEQQHYVIANLIRGGVFGEAEEK
Anti-CRISPR protein AcrF10 K 99 Vibrio Nigripulchritudo , Influenza A Virus (A/Malaya/302/1954(H1N1)) , Fischerella Sp. Utex 'Lb 1931' GSMTTFRIENVRIETINDFDMVKFDLVTDLGRVELAEHVNYDSEGDFKSVEYTDSNIRYNMVDELCSVFDLTDKPSLMPAIDYVTFAEIIEAVEEMLEA
CRISPR-associated endonuclease Cas6/Csy4 L 189 Vibrio Nigripulchritudo , Influenza A Virus (A/Malaya/302/1954(H1N1)) , Fischerella Sp. Utex 'Lb 1931' MAMDHYLDIRLRPDPEFPPAQLMSVLFGKLHQALVAQGGDRIGVSFPDLDESRSRLGERLRIHASADDLRALLARPWLEGLRDHLQFGEPAVVPHPTPYRQVSRVQAKSNPERLRRRLMRRHDLSEEEARKRIPDTVARALDLPFVTLRSQSTGQHFRLFIRHGPLQVTAEEGGFTCYGLSKGGFVPWF

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
Pseudomonas aeruginosa strain SMC4485 CRISPR repeat sequence m 60 NA CUAAGAAAUUCACGGCGGGCUUGAUGUCCGCGUCUACCUGGUUCACUGCCGUGUAGGCAG
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2017-09-25
Deposition Author(s): Bartesaghi, A. , Earl, L. , Falconieri, V. , Fox, T. , Guo, T.W. , Merk, A. , Patel, D.J. , Rao, P. , Subramaniam, S. , Yang, H.