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FASTA Sequence PDB Format mmCIF Format
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6AEG

Crystal structure of xcas9 in complex with sgrna and target dna (gat pam)

PDB DOI: 10.2210/pdb6aeg/pdb

Classification: DNA BINDING PROTEIN/DNA/RNA
Organism(s): Streptococcus Pyogenes , Synthetic Construct

Deposited: 2018-08-04
Deposition Author(s): Guo, M. , Huang, Z. , Ren, K. , Zhu, Y.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.701 Å

6aeg
Literature

Crystal structure of xcas9 in complex with sgrna and target dna (gat pam)

Guo, M. , Huang, Z. , Ren, K. , Zhu, Y.

Primary Citation of Related Structures: 6AEG


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (95-MER) a 100 NA GGAUAACUCAAUUUGUAAAAAAGUUUUAGAGCUAGAAAUAGCAAGUUAAAAUAAGGCUAGUCCGUUAUCAACUUGAAAAAGUGGCACCGAGUCGGUGCUU
DNA (25-MER) c 28 NA CAATAATCTTTTTTACAAATTGAGTTAT
DNA (5'-D(*AP*AP*AP*GP*AP*TP*TP*AP*TP*TP*G)-3') d 11 NA AAAGATTATTG

Proteins
Molecule Chains Sequence Length Organism Sequence
DNA nuclease B 1368 Streptococcus Pyogenes , Synthetic Construct MDKKYSIGLAIGTNSVGWAVITDEYKVPSKKFKVLGNTDRHSIKKNLIGALLFDSGETAEATRLKRTARRRYTRRKNRICYLQEIFSNEMAKVDDSFFHRLEESFLVEEDKKHERHPIFGNIVDEVAYHEKYPTIYHLRKKLVDSTDKADLRLIYLALAHMIKFRGHFLIEGDLNPDNSDVDKLFIQLVQTYNQLFEENPINASGVDAKAILSARLSKSRRLENLIAQLPGEKKNGLFGNLIALSLGLTPNFKSNFDLAEDTKLQLSKDTYDDDLDNLLAQIGDQYADLFLAAKNLSDAILLSDILRVNTEITKAPLSASMIKLYDEHHQDLTLLKALVRQQLPEKYKEIFFDQSKNGYAGYIDGGASQEEFYKFIKPILEKMDGTEELLVKLNREDLLRKQRTFDNGIIPHQIHLGELHAILRRQEDFYPFLKDNREKIEKILTFRIPYYVGPLARGNSRFAWMTRKSEETITPWNFEKVVDKGASAQSFIERMTNFDKNLPNEKVLPKHSLLYEYFTVYNELTKVKYVTEGMRKPAFLSGDQKKAIVDLLFKTNRKVTVKQLKEDYFKKIECFDSVEISGVEDRFNASLGTYHDLLKIIKDKDFLDNEENEDILEDIVLTLTLFEDREMIEERLKTYAHLFDDKVMKQLKRRRYTGWGRLSRKLINGIRDKQSGKTILDFLKSDGFANRNFIQLIHDDSLTFKEDIQKAQVSGQGDSLHEHIANLAGSPAIKKGILQTVKVVDELVKVMGRHKPENIVIEMARENQTTQKGQKNSRERMKRIEEGIKELGSQILKEHPVENTQLQNEKLYLYYLQNGRDMYVDQELDINRLSDYDVDAIVPQSFLKDDSIDNKVLTRSDKNRGKSDNVPSEEVVKKMKNYWRQLLNAKLITQRKFDNLTKAERGGLSELDKAGFIKRQLVETRQITKHVAQILDSRMNTKYDENDKLIREVKVITLKSKLVSDFRKDFQFYKVREINNYHHAHDAYLNAVVGTALIKKYPKLESEFVYGDYKVYDVRKMIAKSEQEIGKATAKYFFYSNIMNFFKTEITLANGEIRKRPLIETNGETGEIVWDKGRDFATVRKVLSMPQVNIVKKTEVQTGGFSKESILPKRNSDKLIARKKDWDPKKYGGFDSPTVAYSVLVVAKVEKGKSKKLKSVKELLGITIMERSSFEKNPIDFLEAKGYKEVKKDLIIKLPKYSLFELENGRKRMLASAGVLQKGNELALPSKYVNFLYLASHYEKLKGSPEDNEQKQLFVEQHKHYLDEIIEQISEFSKRVILADANLDKVLSAYNKHRDKPIREQAENIIHLFTLTNLGAPAAFKYFDTTIDRKRYTSTKEVLDATLIHQSITGLYETRIDLSQLGGD
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2018-08-04
Deposition Author(s): Guo, M. , Huang, Z. , Ren, K. , Zhu, Y.