5YQ7
Cryo-em structure of the rc-lh core complex from roseiflexus castenholzii
PDB DOI: 10.2210/pdb5yq7/pdb
Classification: PHOTOSYNTHESIS Organism(s): Roseiflexus Castenholzii
Deposited: 2017-11-05 Deposition Author(s): Blankenship, R.E. , Ding, W. , Huang, X.J. , Niu, T.X. , Niu, W.Q. , Shi, Y. , Sun, F. , Wang, Q.Q. , Xin, Y.Y. , Xu, X.L.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 4.1 Å
Cryo-em structure of the rc-lh core complex from roseiflexus castenholzii
Blankenship, R.E. , Ding, W. , Huang, X.J. , Niu, T.X. , Niu, W.Q. , Shi, Y. , Sun, F. , Wang, Q.Q. , Xin, Y.Y. , Xu, X.L.
Primary Citation of Related Structures: 5YQ7
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Beta subunit of light-harvesting 1 | E | 55 | Roseiflexus Castenholzii | MTDKPQNDLVPDQWKPLFNNAQWLVHDIVVKTIYGGLIIAVIAHVLCWAWTPWIR |
| Beta subunit of light-harvesting 1 | B | 55 | Roseiflexus Castenholzii | MTDKPQNDLVPDQWKPLFNNAQWLVHDIVVKTIYGGLIIAVIAHVLCWAWTPWIR |
| Beta subunit of light-harvesting 1 | 0 | 55 | Roseiflexus Castenholzii | MTDKPQNDLVPDQWKPLFNNAQWLVHDIVVKTIYGGLIIAVIAHVLCWAWTPWIR |
| Beta subunit of light-harvesting 1 | 8 | 55 | Roseiflexus Castenholzii | MTDKPQNDLVPDQWKPLFNNAQWLVHDIVVKTIYGGLIIAVIAHVLCWAWTPWIR |
| Beta subunit of light-harvesting 1 | 6 | 55 | Roseiflexus Castenholzii | MTDKPQNDLVPDQWKPLFNNAQWLVHDIVVKTIYGGLIIAVIAHVLCWAWTPWIR |
| Beta subunit of light-harvesting 1 | 4 | 55 | Roseiflexus Castenholzii | MTDKPQNDLVPDQWKPLFNNAQWLVHDIVVKTIYGGLIIAVIAHVLCWAWTPWIR |
| Beta subunit of light-harvesting 1 | 2 | 55 | Roseiflexus Castenholzii | MTDKPQNDLVPDQWKPLFNNAQWLVHDIVVKTIYGGLIIAVIAHVLCWAWTPWIR |
| Beta subunit of light-harvesting 1 | K | 55 | Roseiflexus Castenholzii | MTDKPQNDLVPDQWKPLFNNAQWLVHDIVVKTIYGGLIIAVIAHVLCWAWTPWIR |
| Beta subunit of light-harvesting 1 | I | 55 | Roseiflexus Castenholzii | MTDKPQNDLVPDQWKPLFNNAQWLVHDIVVKTIYGGLIIAVIAHVLCWAWTPWIR |
| Beta subunit of light-harvesting 1 | G | 55 | Roseiflexus Castenholzii | MTDKPQNDLVPDQWKPLFNNAQWLVHDIVVKTIYGGLIIAVIAHVLCWAWTPWIR |
| Beta subunit of light-harvesting 1 | W | 55 | Roseiflexus Castenholzii | MTDKPQNDLVPDQWKPLFNNAQWLVHDIVVKTIYGGLIIAVIAHVLCWAWTPWIR |
| Beta subunit of light-harvesting 1 | U | 55 | Roseiflexus Castenholzii | MTDKPQNDLVPDQWKPLFNNAQWLVHDIVVKTIYGGLIIAVIAHVLCWAWTPWIR |
| Beta subunit of light-harvesting 1 | S | 55 | Roseiflexus Castenholzii | MTDKPQNDLVPDQWKPLFNNAQWLVHDIVVKTIYGGLIIAVIAHVLCWAWTPWIR |
| Beta subunit of light-harvesting 1 | Q | 55 | Roseiflexus Castenholzii | MTDKPQNDLVPDQWKPLFNNAQWLVHDIVVKTIYGGLIIAVIAHVLCWAWTPWIR |
| Beta subunit of light-harvesting 1 | O | 55 | Roseiflexus Castenholzii | MTDKPQNDLVPDQWKPLFNNAQWLVHDIVVKTIYGGLIIAVIAHVLCWAWTPWIR |
| Precursor for L subunits of photosynthetic reaction center | L | 310 | Roseiflexus Castenholzii | MSAVPRALPLPSGETLPAEAISSTGSQAASAEVIPFSIIEEFYKRPGKTLAARFFGVDPFDFWIGRFYVGLFGAISIIGIILGVAFYLYEGVVNEGTLNILAMRIEPPPVSQGLNVDPAQPGFFWFLTMVAATIAFVGWLLRQIDISLKLDMGMEVPIAFGAVVSSWITLQWLRPIAMGAWGHGFPLGITHHLDWVSNIGYQYYNFFYNPFHAIGITLLFASTLFLHMHGSAVLSEAKRNISDQNIHVFWRNILGYSIGEIGIHRVAFWTGAASVLFSNLCIFLSGTFVKDWNAFWGFWDKMPIWNGVGQ |
| Cytochrome subunit of photosynthetic reaction center | C | 320 | Roseiflexus Castenholzii | MIQQPPTLFPEITNTVRGRFYIVAGIISVVMAVASIAIFWWIFYTITPAPAPPLQNPIYVNYTQEPTDYISAESLAAMNAYIQANPQPQAVQVLKGMTTAQISAYMVAQVSGGLKVDCSYCHNIANFAQQDGYPNAAKKVTARKMMLMSADLNQNYTAKLPASVGGYQITCATCHNGKAAGLEPYPIEIMNTLPNDWRLPLELDYPGGLVVTGRKDVSNHEVEQNQFAMYHMNVSMGQGCTFCHNARYFPSYEIAQKNHSIIMLQMTKHIQETYVAPGGRIADGIMAGKSPSCWLCHQGANIPPGAAKPGQVPAVLSSTP |
| Alpha subunit of light-harvesting 1 | T | 42 | Roseiflexus Castenholzii | MKDRPFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLRAP |
| Alpha subunit of light-harvesting 1 | V | 42 | Roseiflexus Castenholzii | MKDRPFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLRAP |
| Alpha subunit of light-harvesting 1 | R | 42 | Roseiflexus Castenholzii | MKDRPFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLRAP |
| Alpha subunit of light-harvesting 1 | P | 42 | Roseiflexus Castenholzii | MKDRPFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLRAP |
| Alpha subunit of light-harvesting 1 | N | 42 | Roseiflexus Castenholzii | MKDRPFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLRAP |
| Alpha subunit of light-harvesting 1 | J | 42 | Roseiflexus Castenholzii | MKDRPFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLRAP |
| Alpha subunit of light-harvesting 1 | H | 42 | Roseiflexus Castenholzii | MKDRPFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLRAP |
| Alpha subunit of light-harvesting 1 | F | 42 | Roseiflexus Castenholzii | MKDRPFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLRAP |
| Alpha subunit of light-harvesting 1 | D | 42 | Roseiflexus Castenholzii | MKDRPFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLRAP |
| Alpha subunit of light-harvesting 1 | A | 42 | Roseiflexus Castenholzii | MKDRPFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLRAP |
| Alpha subunit of light-harvesting 1 | 9 | 42 | Roseiflexus Castenholzii | MKDRPFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLRAP |
| Alpha subunit of light-harvesting 1 | 7 | 42 | Roseiflexus Castenholzii | MKDRPFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLRAP |
| Alpha subunit of light-harvesting 1 | 5 | 42 | Roseiflexus Castenholzii | MKDRPFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLRAP |
| Alpha subunit of light-harvesting 1 | 3 | 42 | Roseiflexus Castenholzii | MKDRPFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLRAP |
| Alpha subunit of light-harvesting 1 | 1 | 42 | Roseiflexus Castenholzii | MKDRPFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLRAP |
| Peptide from Precursor for L and M subunits of photosynthetic reaction center | Y | 25 | Roseiflexus Castenholzii | XXXXXXXXXXXXXXXXXXXXXXXXX |
| Subunit X | X | 23 | Roseiflexus Castenholzii | XXXXXXXXXXXXXXXXXXXXXXX |
| Precursor for M subunits of photosynthetic reaction center | M | 306 | Roseiflexus Castenholzii | IDLHDEEYRDGLEGTIAKPPGHVGWMQRLLGEGQVGPIYVGLWGVISFITFFASAFIILVDYGRQVGWNPIIYLREFWNLAVYPPPTEYGLSWNVPWDKGGAWLAATFFLHISVLTWWARLYTRAKATGVGTQLAWGFASALSLYFVIYLFHPLALGNWSAAPGHGFRAILDWTNYVSIHWGNFYYNPFHMLSIFFLLGSTLLLAMHGATIVATSKWKSEMEFTEMMAEGPGTQRAQLFWRWVMGWNANSYNIHIWAWWFAAFTAITGAIGLFLSGTLVPDWYAWGETAKIVAPWPNPDWAQYVFR |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2017-11-05 Deposition Author(s): Blankenship, R.E. , Ding, W. , Huang, X.J. , Niu, T.X. , Niu, W.Q. , Shi, Y. , Sun, F. , Wang, Q.Q. , Xin, Y.Y. , Xu, X.L.