PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

5WMB

Structure of the 10s (-)-cis-bp-dg modified rev1 ternary complex (the bp residue is disordered)

PDB DOI: 10.2210/pdb5wmb/pdb

Classification: transferase/dna
Organism(s): Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Synthetic Construct

Deposited: 2017-07-28
Deposition Author(s): Aggarwal, A.K. , Geacintov, N.E. , Kolbanovsky, A. , Landes, H. , Rechkoblit, O.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.25 Å

Literature

Structure of the 10s (-)-cis-bp-dg modified rev1 ternary complex (the bp residue is disordered)

Aggarwal, A.K. , Geacintov, N.E. , Kolbanovsky, A. , Landes, H. , Rechkoblit, O.

Primary Citation of Related Structures: 5WMB


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*GP*GP*GP*GP*TP*GP*TP*GP*GP*TP*AP*(DDG))-3') p 12 NA GGGGTGTGGTAG
DNA (5'-D(P*AP*TP*CP*GP*CP*TP*AP*CP*CP*AP*CP*AP*CP*CP*C)-3') t 17 NA CATCGCTACCACACCCC

Proteins
Molecule Chains Sequence Length Organism Sequence
DNA repair protein REV1 A 434 Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Synthetic Construct KRIVACDDPDFLTSYFAHSRLHHLSAWKANLKDKFLNENIHKYTKITDKDTYIIFHIDFDCFFATVAYLCRSSSFSACDFKRDPIVVCHGTKNSDIASCNYVARSYGIKNGMWVSQAEKMLPNGIKLISLPYTFEQFQLKSEAFYSTLKRLNIFNLILPISIDEAVCVRIIPDNIHNTNTLNARLCEEIRQEIFQGTNGCTVSIGCSDSLVLARLALKMAKPNGYNITFKSNLSEEFWSSFKLDDLPGVGHSTLSRLESTFDSPHSLNDLRKRYTLDALKASVGSKLGMKIHLALQGQDDEESLKILYDPKEVLQRKSLSIDINWGIRFKNITQVDLFIERGCQYLLEKLNEINKTTSQITLKLMRRCKDAPIEPPKYMGMGRCDSFSRSSRLGIPTNEFGIIATEMKSLYRTLGCPPMELRGLALQFNKLVDV
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-07-28
Deposition Author(s): Aggarwal, A.K. , Geacintov, N.E. , Kolbanovsky, A. , Landes, H. , Rechkoblit, O.