5U3N
Crystal structure of dh511.12p fab in complex with hiv-1 gp41 mper peptide
PDB DOI: 10.2210/pdb5u3n/pdb
Classification: IMMUNE SYSTEM/VIRAL PROTEIN Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)
Deposited: 2016-12-02 Deposition Author(s): Haynes, B.F. , Lougheed, C.S. , Nicely, N.I. , Ofek, G. , Williams, L.D. , Wu, L.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2 Å
Crystal structure of dh511.12p fab in complex with hiv-1 gp41 mper peptide
Haynes, B.F. , Lougheed, C.S. , Nicely, N.I. , Ofek, G. , Williams, L.D. , Wu, L.
Primary Citation of Related Structures: 5U3N
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DH511.12P Fab Heavy Chain | H | 235 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | QVQLVQSGGGLVKPGGSLTPSCVTSGFTFSNTWMSWVRQTPGKGLEWVARISRVGDGPIIDYAAPVKGRFIISRDDSRNTLFLHMNNLKTEDTAVYYCTADEGAPILRFFEWGYYNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC |
| DH511.12P Fab Light Chain | L | 216 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | DIRLTQSPSSLSASVGDRITITCRASQSIKDYLNWYKHRPGEAPKLLIYSASKLRSGVSSRFSGSGYGSAFTLTISSLQPEDFATYYCQESYSSVPMYIFGQGTKVDLKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
| gp41 MPER peptide | A | 28 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | KKKELDKWASLWNWFDITNWLWYIRKKK |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2016-12-02 Deposition Author(s): Haynes, B.F. , Lougheed, C.S. , Nicely, N.I. , Ofek, G. , Williams, L.D. , Wu, L.