5MV4
Acc1 fab fragment in complex with citrullinated cii616-639 epitope of collagen type ii (ptm23)
PDB DOI: 10.2210/pdb5mv4/pdb
Classification: IMMUNE SYSTEM Organism(s): Mus Musculus , Synthetic Construct
Deposited: 2017-01-15 Deposition Author(s): Dobritzsch, D. , Ge, C. , Holmdahl, R.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.9 Å
Acc1 fab fragment in complex with citrullinated cii616-639 epitope of collagen type ii (ptm23)
Dobritzsch, D. , Ge, C. , Holmdahl, R.
Primary Citation of Related Structures: 5MV4
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| ACC1 antibody Fab fragment, heavy chain | A | 218 | Mus Musculus , Synthetic Construct | EVKLEESGGGLVQPGGSMKLSCAASGFTFSDAWMDWVRQSPEKGLEWVAEIRNKVNNHATNYAESVKGRFTISRDDSRSVVYLQMNNLKPEDTGIYYCTGLTFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGGTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPALLLSGLYTLSSSVTVTSNTWPSQTITCNVAHPASSTKVDKKIEPRGP |
| ACC1 antibody Fab fragment, heavy chain | C | 218 | Mus Musculus , Synthetic Construct | EVKLEESGGGLVQPGGSMKLSCAASGFTFSDAWMDWVRQSPEKGLEWVAEIRNKVNNHATNYAESVKGRFTISRDDSRSVVYLQMNNLKPEDTGIYYCTGLTFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGGTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPALLLSGLYTLSSSVTVTSNTWPSQTITCNVAHPASSTKVDKKIEPRGP |
| ACC1 antibody Fab fragment, heavy chain | F | 218 | Mus Musculus , Synthetic Construct | EVKLEESGGGLVQPGGSMKLSCAASGFTFSDAWMDWVRQSPEKGLEWVAEIRNKVNNHATNYAESVKGRFTISRDDSRSVVYLQMNNLKPEDTGIYYCTGLTFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGGTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPALLLSGLYTLSSSVTVTSNTWPSQTITCNVAHPASSTKVDKKIEPRGP |
| ACC1 antibody Fab fragment, heavy chain | I | 218 | Mus Musculus , Synthetic Construct | EVKLEESGGGLVQPGGSMKLSCAASGFTFSDAWMDWVRQSPEKGLEWVAEIRNKVNNHATNYAESVKGRFTISRDDSRSVVYLQMNNLKPEDTGIYYCTGLTFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGGTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPALLLSGLYTLSSSVTVTSNTWPSQTITCNVAHPASSTKVDKKIEPRGP |
| ACC1 antibody Fab fragment, heavy chain | L | 218 | Mus Musculus , Synthetic Construct | EVKLEESGGGLVQPGGSMKLSCAASGFTFSDAWMDWVRQSPEKGLEWVAEIRNKVNNHATNYAESVKGRFTISRDDSRSVVYLQMNNLKPEDTGIYYCTGLTFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGGTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPALLLSGLYTLSSSVTVTSNTWPSQTITCNVAHPASSTKVDKKIEPRGP |
| ACC1 antibody Fab fragment, heavy chain | O | 218 | Mus Musculus , Synthetic Construct | EVKLEESGGGLVQPGGSMKLSCAASGFTFSDAWMDWVRQSPEKGLEWVAEIRNKVNNHATNYAESVKGRFTISRDDSRSVVYLQMNNLKPEDTGIYYCTGLTFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGGTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPALLLSGLYTLSSSVTVTSNTWPSQTITCNVAHPASSTKVDKKIEPRGP |
| ACC1 antibody Fab fragment, heavy chain | R | 218 | Mus Musculus , Synthetic Construct | EVKLEESGGGLVQPGGSMKLSCAASGFTFSDAWMDWVRQSPEKGLEWVAEIRNKVNNHATNYAESVKGRFTISRDDSRSVVYLQMNNLKPEDTGIYYCTGLTFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGGTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPALLLSGLYTLSSSVTVTSNTWPSQTITCNVAHPASSTKVDKKIEPRGP |
| ACC1 antibody Fab fragment, heavy chain | U | 218 | Mus Musculus , Synthetic Construct | EVKLEESGGGLVQPGGSMKLSCAASGFTFSDAWMDWVRQSPEKGLEWVAEIRNKVNNHATNYAESVKGRFTISRDDSRSVVYLQMNNLKPEDTGIYYCTGLTFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGGTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPALLLSGLYTLSSSVTVTSNTWPSQTITCNVAHPASSTKVDKKIEPRGP |
| ACC1 antibody Fab fragment, light chain | B | 218 | Mus Musculus , Synthetic Construct | DIVLTQSPASLAVSLGQRATISCRASESVDNYGISSMNWFQQKAGQPPKFLIYAASKQGSGVPARFSGSGSGTDFSLIIHPVEEDDTAVYFCQQSKGVPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC |
| ACC1 antibody Fab fragment, light chain | D | 218 | Mus Musculus , Synthetic Construct | DIVLTQSPASLAVSLGQRATISCRASESVDNYGISSMNWFQQKAGQPPKFLIYAASKQGSGVPARFSGSGSGTDFSLIIHPVEEDDTAVYFCQQSKGVPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC |
| ACC1 antibody Fab fragment, light chain | G | 218 | Mus Musculus , Synthetic Construct | DIVLTQSPASLAVSLGQRATISCRASESVDNYGISSMNWFQQKAGQPPKFLIYAASKQGSGVPARFSGSGSGTDFSLIIHPVEEDDTAVYFCQQSKGVPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC |
| ACC1 antibody Fab fragment, light chain | J | 218 | Mus Musculus , Synthetic Construct | DIVLTQSPASLAVSLGQRATISCRASESVDNYGISSMNWFQQKAGQPPKFLIYAASKQGSGVPARFSGSGSGTDFSLIIHPVEEDDTAVYFCQQSKGVPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC |
| ACC1 antibody Fab fragment, light chain | M | 218 | Mus Musculus , Synthetic Construct | DIVLTQSPASLAVSLGQRATISCRASESVDNYGISSMNWFQQKAGQPPKFLIYAASKQGSGVPARFSGSGSGTDFSLIIHPVEEDDTAVYFCQQSKGVPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC |
| ACC1 antibody Fab fragment, light chain | P | 218 | Mus Musculus , Synthetic Construct | DIVLTQSPASLAVSLGQRATISCRASESVDNYGISSMNWFQQKAGQPPKFLIYAASKQGSGVPARFSGSGSGTDFSLIIHPVEEDDTAVYFCQQSKGVPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC |
| ACC1 antibody Fab fragment, light chain | S | 218 | Mus Musculus , Synthetic Construct | DIVLTQSPASLAVSLGQRATISCRASESVDNYGISSMNWFQQKAGQPPKFLIYAASKQGSGVPARFSGSGSGTDFSLIIHPVEEDDTAVYFCQQSKGVPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC |
| ACC1 antibody Fab fragment, light chain | V | 218 | Mus Musculus , Synthetic Construct | DIVLTQSPASLAVSLGQRATISCRASESVDNYGISSMNWFQQKAGQPPKFLIYAASKQGSGVPARFSGSGSGTDFSLIIHPVEEDDTAVYFCQQSKGVPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC |
| synthetic peptide containing the citrullinated collagen type II epitope CII616-639,Collagen alpha-1(II) chain,synthetic peptide containing the citrullinated collagen type II epitope CII616-639 | X | 46 | Mus Musculus , Synthetic Construct | GPPGPPGPPGPPGPPGARGAPGERGETGPPGPAGFAGPPGPPGPPG |
| synthetic peptide containing the citrullinated collagen type II epitope CII616-639,Collagen alpha-1(II) chain,synthetic peptide containing the citrullinated collagen type II epitope CII616-639 | E | 46 | Mus Musculus , Synthetic Construct | GPPGPPGPPGPPGPPGARGAPGERGETGPPGPAGFAGPPGPPGPPG |
| synthetic peptide containing the citrullinated collagen type II epitope CII616-639,Collagen alpha-1(II) chain,synthetic peptide containing the citrullinated collagen type II epitope CII616-639 | H | 46 | Mus Musculus , Synthetic Construct | GPPGPPGPPGPPGPPGARGAPGERGETGPPGPAGFAGPPGPPGPPG |
| synthetic peptide containing the citrullinated collagen type II epitope CII616-639,Collagen alpha-1(II) chain,synthetic peptide containing the citrullinated collagen type II epitope CII616-639 | K | 46 | Mus Musculus , Synthetic Construct | GPPGPPGPPGPPGPPGARGAPGERGETGPPGPAGFAGPPGPPGPPG |
| synthetic peptide containing the citrullinated collagen type II epitope CII616-639,Collagen alpha-1(II) chain,synthetic peptide containing the citrullinated collagen type II epitope CII616-639 | N | 46 | Mus Musculus , Synthetic Construct | GPPGPPGPPGPPGPPGARGAPGERGETGPPGPAGFAGPPGPPGPPG |
| synthetic peptide containing the citrullinated collagen type II epitope CII616-639,Collagen alpha-1(II) chain,synthetic peptide containing the citrullinated collagen type II epitope CII616-639 | Q | 46 | Mus Musculus , Synthetic Construct | GPPGPPGPPGPPGPPGARGAPGERGETGPPGPAGFAGPPGPPGPPG |
| synthetic peptide containing the citrullinated collagen type II epitope CII616-639,Collagen alpha-1(II) chain,synthetic peptide containing the citrullinated collagen type II epitope CII616-639 | T | 46 | Mus Musculus , Synthetic Construct | GPPGPPGPPGPPGPPGARGAPGERGETGPPGPAGFAGPPGPPGPPG |
| synthetic peptide containing the citrullinated collagen type II epitope CII616-639,Collagen alpha-1(II) chain,synthetic peptide containing the citrullinated collagen type II epitope CII616-639 | W | 46 | Mus Musculus , Synthetic Construct | GPPGPPGPPGPPGPPGARGAPGERGETGPPGPAGFAGPPGPPGPPG |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2017-01-15 Deposition Author(s): Dobritzsch, D. , Ge, C. , Holmdahl, R.