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5GJ6

Functional and structural characterization of p[19] rotavirus vp8* interaction with histo-blood group antigens

PDB DOI: 10.2210/pdb5gj6/pdb

Classification: VIRAL PROTEIN
Organism(s): Human Rotavirus A

Deposited: 2016-06-28
Deposition Author(s): Duan, Z. , Sun, X.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.388 Å

5gj6
Literature

Functional and structural characterization of p[19] rotavirus vp8* interaction with histo-blood group antigens

Duan, Z. , Sun, X.

Primary Citation of Related Structures: 5GJ6


Proteins
Molecule Chains Sequence Length Organism Sequence
Outer capsid protein VP4 A 160 Human Rotavirus A VLDGPYQPVAFKPPNDYWILVNSNSNGVVLEGTNNTDVWVAIISIEPNVNSESRQYSLFGVNKQITVVNTSNKWKFMEMFRNNSNAEFQHKRTLTSSTKLVGILKHGGRLWTYHGETPNATTDYSTTSNLNEISVTTYAEFYIIPRSQESKCTEYINTGL
Outer capsid protein VP4 B 160 Human Rotavirus A VLDGPYQPVAFKPPNDYWILVNSNSNGVVLEGTNNTDVWVAIISIEPNVNSESRQYSLFGVNKQITVVNTSNKWKFMEMFRNNSNAEFQHKRTLTSSTKLVGILKHGGRLWTYHGETPNATTDYSTTSNLNEISVTTYAEFYIIPRSQESKCTEYINTGL
Outer capsid protein VP4 C 160 Human Rotavirus A VLDGPYQPVAFKPPNDYWILVNSNSNGVVLEGTNNTDVWVAIISIEPNVNSESRQYSLFGVNKQITVVNTSNKWKFMEMFRNNSNAEFQHKRTLTSSTKLVGILKHGGRLWTYHGETPNATTDYSTTSNLNEISVTTYAEFYIIPRSQESKCTEYINTGL
Outer capsid protein VP4 D 160 Human Rotavirus A VLDGPYQPVAFKPPNDYWILVNSNSNGVVLEGTNNTDVWVAIISIEPNVNSESRQYSLFGVNKQITVVNTSNKWKFMEMFRNNSNAEFQHKRTLTSSTKLVGILKHGGRLWTYHGETPNATTDYSTTSNLNEISVTTYAEFYIIPRSQESKCTEYINTGL
Outer capsid protein VP4 E 160 Human Rotavirus A VLDGPYQPVAFKPPNDYWILVNSNSNGVVLEGTNNTDVWVAIISIEPNVNSESRQYSLFGVNKQITVVNTSNKWKFMEMFRNNSNAEFQHKRTLTSSTKLVGILKHGGRLWTYHGETPNATTDYSTTSNLNEISVTTYAEFYIIPRSQESKCTEYINTGL
Outer capsid protein VP4 F 160 Human Rotavirus A VLDGPYQPVAFKPPNDYWILVNSNSNGVVLEGTNNTDVWVAIISIEPNVNSESRQYSLFGVNKQITVVNTSNKWKFMEMFRNNSNAEFQHKRTLTSSTKLVGILKHGGRLWTYHGETPNATTDYSTTSNLNEISVTTYAEFYIIPRSQESKCTEYINTGL
Outer capsid protein VP4 G 160 Human Rotavirus A VLDGPYQPVAFKPPNDYWILVNSNSNGVVLEGTNNTDVWVAIISIEPNVNSESRQYSLFGVNKQITVVNTSNKWKFMEMFRNNSNAEFQHKRTLTSSTKLVGILKHGGRLWTYHGETPNATTDYSTTSNLNEISVTTYAEFYIIPRSQESKCTEYINTGL
Outer capsid protein VP4 H 160 Human Rotavirus A VLDGPYQPVAFKPPNDYWILVNSNSNGVVLEGTNNTDVWVAIISIEPNVNSESRQYSLFGVNKQITVVNTSNKWKFMEMFRNNSNAEFQHKRTLTSSTKLVGILKHGGRLWTYHGETPNATTDYSTTSNLNEISVTTYAEFYIIPRSQESKCTEYINTGL
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-06-28
Deposition Author(s): Duan, Z. , Sun, X.