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4TZZ

Co-crystals of the ternary complex containing a t-box stem i rna, its cognate trnagly, and b. subtilis ybxf protein, treated by removing lithium sulfate and increasing peg3350 concentration from 20% to 45% post crystallization

PDB DOI: 10.2210/pdb4tzz/pdb

Classification: RIBOSOMAL PROTEIN/RNA
Organism(s): Bacillus Subtilis , Synthetic Construct

Deposited: 2014-07-11
Deposition Author(s): Ferre-D'Amare, A.R. , Zhang, J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.64 Å

4tzz
Literature

Co-crystals of the ternary complex containing a t-box stem i rna, its cognate trnagly, and b. subtilis ybxf protein, treated by removing lithium sulfate and increasing peg3350 concentration from 20% to 45% post crystallization

Ferre-D'Amare, A.R. , Zhang, J.

Primary Citation of Related Structures: 4TZZ


Proteins
Molecule Chains Sequence Length Organism Sequence
Ribosome-associated protein L7Ae-like A 82 Bacillus Subtilis , Synthetic Construct GSYDKVSQAKSIIIGTKQTVKALKRGSVKEVVVAKDADPILTSSVVSLAEDQGISVSMVESMKKLGKACGIEVGAAAVAIIL
Ribosome-associated protein L7Ae-like D 82 Bacillus Subtilis , Synthetic Construct GSYDKVSQAKSIIIGTKQTVKALKRGSVKEVVVAKDADPILTSSVVSLAEDQGISVSMVESMKKLGKACGIEVGAAAVAIIL
Ribosome-associated protein L7Ae-like G 82 Bacillus Subtilis , Synthetic Construct GSYDKVSQAKSIIIGTKQTVKALKRGSVKEVVVAKDADPILTSSVVSLAEDQGISVSMVESMKKLGKACGIEVGAAAVAIIL
Ribosome-associated protein L7Ae-like J 82 Bacillus Subtilis , Synthetic Construct GSYDKVSQAKSIIIGTKQTVKALKRGSVKEVVVAKDADPILTSSVVSLAEDQGISVSMVESMKKLGKACGIEVGAAAVAIIL

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
engineered tRNAGly b 75 NA GAGUAGUUCAGUGGUAGAACACCACCUUGCCAAGGUGGGGGUCGCGGGUUCGAAUCCCGUCUCGGGCGAAAGCCC
engineered tRNAGly e 75 NA GAGUAGUUCAGUGGUAGAACACCACCUUGCCAAGGUGGGGGUCGCGGGUUCGAAUCCCGUCUCGGGCGAAAGCCC
engineered tRNAGly h 75 NA GAGUAGUUCAGUGGUAGAACACCACCUUGCCAAGGUGGGGGUCGCGGGUUCGAAUCCCGUCUCGGGCGAAAGCCC
engineered tRNAGly k 75 NA GAGUAGUUCAGUGGUAGAACACCACCUUGCCAAGGUGGGGGUCGCGGGUUCGAAUCCCGUCUCGGGCGAAAGCCC
T-box Stem I RNA c 102 NA GGGUGCGAUGAGAAGAAGAGUAUUAAGGAUUUACUAUGAUUAGCGACUCUAGGAUAGUGAAAGCUAGAGGAUAGUAACCUUAAGAAGGCACUUCGAGCACCC
T-box Stem I RNA f 102 NA GGGUGCGAUGAGAAGAAGAGUAUUAAGGAUUUACUAUGAUUAGCGACUCUAGGAUAGUGAAAGCUAGAGGAUAGUAACCUUAAGAAGGCACUUCGAGCACCC
T-box Stem I RNA i 102 NA GGGUGCGAUGAGAAGAAGAGUAUUAAGGAUUUACUAUGAUUAGCGACUCUAGGAUAGUGAAAGCUAGAGGAUAGUAACCUUAAGAAGGCACUUCGAGCACCC
T-box Stem I RNA l 102 NA GGGUGCGAUGAGAAGAAGAGUAUUAAGGAUUUACUAUGAUUAGCGACUCUAGGAUAGUGAAAGCUAGAGGAUAGUAACCUUAAGAAGGCACUUCGAGCACCC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2014-07-11
Deposition Author(s): Ferre-D'Amare, A.R. , Zhang, J.