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4S2Q

Crystal structure of hmg domain of the chondrogenesis master regulator, sox9 in complex with chip-seq identified dna element

PDB DOI: 10.2210/pdb4s2q/pdb

Classification: DNA BINDING PROTEIN/DNA
Organism(s): Mus Musculus , Synthetic Construct

Deposited: 2015-01-21
Deposition Author(s): Kolatkar, P.R. , Lescar, J. , Moovarkumudalvan, B. , Vivekanandan, S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.7 Å

4s2q
Literature

Crystal structure of hmg domain of the chondrogenesis master regulator, sox9 in complex with chip-seq identified dna element

Kolatkar, P.R. , Lescar, J. , Moovarkumudalvan, B. , Vivekanandan, S.

Primary Citation of Related Structures: 4S2Q


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(P*AP*GP*GP*CP*TP*TP*TP*GP*TP*TP*CP*TP*CP*CP*TP*G)-3') a 16 NA AGGCTTTGTTCTCCTG
DNA (5'-D(P*AP*GP*GP*AP*GP*AP*AP*CP*AP*AP*AP*GP*CP*CP*TP*G)-3') b 16 NA AGGAGAACAAAGCCTG

Proteins
Molecule Chains Sequence Length Organism Sequence
Transcription factor SOX-9 D 76 Mus Musculus , Synthetic Construct PHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRR
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2015-01-21
Deposition Author(s): Kolatkar, P.R. , Lescar, J. , Moovarkumudalvan, B. , Vivekanandan, S.