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4PD4

Structural analysis of atovaquone-inhibited cytochrome bc1 complex reveals the molecular basis of antimalarial drug action

PDB DOI: 10.2210/pdb4pd4/pdb

Classification: OXIDOREDUCTASE/INHIBITOR
Organism(s): Mus Musculus , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C)

Deposited: 2014-04-17
Deposition Author(s): Birth, D. , Hunte, C. , Kao, W.-C.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.04 Å

Literature

Structural analysis of atovaquone-inhibited cytochrome bc1 complex reveals the molecular basis of antimalarial drug action

Birth, D. , Hunte, C. , Kao, W.-C.

Primary Citation of Related Structures: 4PD4


Proteins
Molecule Chains Sequence Length Organism Sequence
Cytochrome b-c1 complex subunit 1, mitochondrial A 431 Mus Musculus , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) AEVTQLSNGIVVATEHNPSAHTASVGVVFGSGAANENPYNNGVSNLWKNIFLSKENSAVAAKEGLALSSNISRDFQSYIVSSLPGSTDKSLDFLNQSFIQQKANLLSSSNFEATKKSVLKQVQDFEDNDHPNRVLEHLHSTAFQNTPLSLPTRGTLESLENLVVADLESFANNHFLNSNAVVVGTGNIKHEDLVNSIESKNLSLQTGTKPVLKKKAAFLGSEVRLRDDTLPKAWISLAVEGEPVNSPNYFVAKLAAQIFGSYNAFEPASRLQGIKLLDNIQEYQLCDNFNHFSLSYKDSGLWGFSTATRNVTMIDDLIHFTLKQWNRLTISVTDTEVERAKSLLKLQLGQLYESGNPVNDANLLGAEVLIKGSKLSLGEAFKKIDAITVKDVKAWAGKRLWDQDIAIAGTGQIEGLLDYMRIRSDMSMMRW
Igh protein J 127 Mus Musculus , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) EVKLQESGAGLVQPSQSLSLTCSVTGYSITSGYYWNWIRLFPGNKLEWVGYISNVGDNNYNPSLKDRLSITRDTSKNQFFLKLNSVTTEDTATYYCARSEYYSVTGYAMDYWGQGTTVTVSSAWRHP
Ig kappa chain V-V region HP 124E1 K 107 Mus Musculus , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) DIELTQTPVSLAASLGDRVTISCRASQDINNFLNWYQQKPDGTIKLLIYYTSRLHAGVPSRFSGSGSGTDYSLTISNLEPEDIATYFCQHHIKFPWTFGAGTKLEIK
Cytochrome b-c1 complex subunit 2, mitochondrial B 352 Mus Musculus , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) LTVSARDAPTKISTLAVKVHGGSRYATKDGVAHLLNRFNFQNTNTRSALKLVRESELLGGTFKSTLDREYITLKATFLKDDLPYYVNALADVLYKTAFKPHELTESVLPAARYDYAVAEQCPVKSAEDQLYAITFRKGLGNPLLYDGVERVSLQDIKDFADKVYTKENLEVSGENVVEADLKRFVDESLLSTLPAGKSLVSKSEPKFFLGEENRVRFIGDSVAAIGIPVNKASLAQYEVLANYLTSALSELSGLISSAKLDKFTDGGLFTLFVRDQDSAVVSSNIKKIVADLKKGKDLSPAINYTKLKNAVQNESVSSPIELNFDAVKDFKLGKFNYVAVGDVSNLPYLDEL
Cytochrome b C 385 Mus Musculus , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) MAFRKSNVYLSLVNSYIIDSPQPSSINYWWNMGSLLGLCLVIQIVTGIFMAMHYSSNIELAFSSVEHIMRDVHNGYILRYLHANGASFFFMVMFMHMAKGLYYGSYRSPRVTLWNVGVIIFILTIATAFLGYCCVYGQMSHWGATVITNLFSAIPFVGNDIVSWLWGGFSVSNPTIQRFFALHYLVPFIIAAMVIMHLMALHIHGSSNPLGITGNLDRIPMHSYFIFKDLVTVFLFMLILALFVFYSPNTLGHPDNYIPGNPLVTPASIVPEWYLLPFYAILRSIPDKLLGVITMFAAILVLLVLPFTDRSVVRGNTFKVLSKFFFFIFVFNFVLLGQIGACHVEVPYVLMGQIATFIYFAYFLIIVPVISTIENVLFYIGRVNK
Cytochrome c1, heme protein, mitochondrial D 248 Mus Musculus , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) MTAAEHGLHAPAYAWSHNGPFETFDHASIRRGYQVYREVCAACHSLDRVAWRTLVGVSHTNEEVRNMAEEFEYDDEPDEQGNPKKRPGKLSDYIPGPYPNEQAARAANQGALPPDLSLIVKARHGGCDYIFSLLTGYPDEPPAGVALPPGSNYNPYFPGGSIAMARVLFDDMVEYEDGTPATTSQMAKDVTTFLNWCAEPEHDERKRLGLKTVIILSSLYLLSIWVKKFKWAGIKTRKFVFNPPKPRK
Cytochrome b-c1 complex subunit Rieske, mitochondrial E 185 Mus Musculus , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) KSTYRTPNFDDVLKENNDADKGRSYAYFMVGAMGLLSSAGAKSTVETFISSMTATADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIQEANSVDMSALKDPQTDADRVKDPQWLIMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPAYEFDGDKVIVG
Cytochrome b-c1 complex subunit 6 F 74 Mus Musculus , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) VTDQLEDLREHFKNTEEGKALVHHYEECAERVKIQQQQPGYADLEHKEDCVEEFFHLQHYLDTATAPRLFDKLK
Cytochrome b-c1 complex subunit 7 G 126 Mus Musculus , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) PQSFTSIARIGDYILKSPVLSKLCVPVANQFINLAGYKKLGLKFDDLIAEENPIMQTALRRLPEDESYARAYRIIRAHQTELTHHLLPRNEWIKAQEDVPYLLPYILEAEAAAKEKDELDNIEVSK
Cytochrome b-c1 complex subunit 8 H 93 Mus Musculus , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) GPPSGKTYMGWWGHMGGPKQKGITSYAVSPYAQKPLQGIFHNAVFNSFRRFKSQFLYVLIPAGIYWYWWKNGNEYNEFLYSKAGREELERVNV
Cytochrome b-c1 complex subunit 9 I 57 Mus Musculus , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) SFSSLYKTFFKRNAVFVGTIFAGAFVFQTVFDTAITSWYENHNKGKLWKDVKARIAA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2014-04-17
Deposition Author(s): Birth, D. , Hunte, C. , Kao, W.-C.