PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

4GZ0

Mus musculus tdp2-dna substrate analog (5'-6-aminohexanol) complex

PDB DOI: 10.2210/pdb4gz0/pdb

Classification: HYDROLASE/dna
Organism(s): Mus Musculus , Synthetic Construct

Deposited: 2012-09-05
Deposition Author(s): Schellenberg, M.J. , Williams, R.S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.113 Å

4gz0
Literature

Mus musculus tdp2-dna substrate analog (5'-6-aminohexanol) complex

Schellenberg, M.J. , Williams, R.S.

Primary Citation of Related Structures: 4GZ0


Proteins
Molecule Chains Sequence Length Organism Sequence
Tyrosyl-DNA phosphodiesterase 2 A 256 Mus Musculus , Synthetic Construct SNGLEDSSTISFITWNIDGLDGCNLPERARGVCSCLALYSPDVVFLQEVIPPYCAYLKKRAASYTIITGNEEGYFTAILLKKGRVKFKSQEIIPFPNTKMMRNLLCVNVSLGGNEFCLMTSHLESTREHSAERIRQLKTVLGKMQEAPDSTTVIFAGDTNLRDQEVIKCGGLPDNVFDAWEFLGKPKHCQYTWDTKANNNLRIPAAYKHRFDRIFFRAEEGHLIPQSLDLVGLEKLDCGRFPSDHWGLLCTLNVVL
Tyrosyl-DNA phosphodiesterase 2 B 256 Mus Musculus , Synthetic Construct SNGLEDSSTISFITWNIDGLDGCNLPERARGVCSCLALYSPDVVFLQEVIPPYCAYLKKRAASYTIITGNEEGYFTAILLKKGRVKFKSQEIIPFPNTKMMRNLLCVNVSLGGNEFCLMTSHLESTREHSAERIRQLKTVLGKMQEAPDSTTVIFAGDTNLRDQEVIKCGGLPDNVFDAWEFLGKPKHCQYTWDTKANNNLRIPAAYKHRFDRIFFRAEEGHLIPQSLDLVGLEKLDCGRFPSDHWGLLCTLNVVL
Tyrosyl-DNA phosphodiesterase 2 E 256 Mus Musculus , Synthetic Construct SNGLEDSSTISFITWNIDGLDGCNLPERARGVCSCLALYSPDVVFLQEVIPPYCAYLKKRAASYTIITGNEEGYFTAILLKKGRVKFKSQEIIPFPNTKMMRNLLCVNVSLGGNEFCLMTSHLESTREHSAERIRQLKTVLGKMQEAPDSTTVIFAGDTNLRDQEVIKCGGLPDNVFDAWEFLGKPKHCQYTWDTKANNNLRIPAAYKHRFDRIFFRAEEGHLIPQSLDLVGLEKLDCGRFPSDHWGLLCTLNVVL
Tyrosyl-DNA phosphodiesterase 2 K 256 Mus Musculus , Synthetic Construct SNGLEDSSTISFITWNIDGLDGCNLPERARGVCSCLALYSPDVVFLQEVIPPYCAYLKKRAASYTIITGNEEGYFTAILLKKGRVKFKSQEIIPFPNTKMMRNLLCVNVSLGGNEFCLMTSHLESTREHSAERIRQLKTVLGKMQEAPDSTTVIFAGDTNLRDQEVIKCGGLPDNVFDAWEFLGKPKHCQYTWDTKANNNLRIPAAYKHRFDRIFFRAEEGHLIPQSLDLVGLEKLDCGRFPSDHWGLLCTLNVVL
Tyrosyl-DNA phosphodiesterase 2 G 256 Mus Musculus , Synthetic Construct SNGLEDSSTISFITWNIDGLDGCNLPERARGVCSCLALYSPDVVFLQEVIPPYCAYLKKRAASYTIITGNEEGYFTAILLKKGRVKFKSQEIIPFPNTKMMRNLLCVNVSLGGNEFCLMTSHLESTREHSAERIRQLKTVLGKMQEAPDSTTVIFAGDTNLRDQEVIKCGGLPDNVFDAWEFLGKPKHCQYTWDTKANNNLRIPAAYKHRFDRIFFRAEEGHLIPQSLDLVGLEKLDCGRFPSDHWGLLCTLNVVL
Tyrosyl-DNA phosphodiesterase 2 I 256 Mus Musculus , Synthetic Construct SNGLEDSSTISFITWNIDGLDGCNLPERARGVCSCLALYSPDVVFLQEVIPPYCAYLKKRAASYTIITGNEEGYFTAILLKKGRVKFKSQEIIPFPNTKMMRNLLCVNVSLGGNEFCLMTSHLESTREHSAERIRQLKTVLGKMQEAPDSTTVIFAGDTNLRDQEVIKCGGLPDNVFDAWEFLGKPKHCQYTWDTKANNNLRIPAAYKHRFDRIFFRAEEGHLIPQSLDLVGLEKLDCGRFPSDHWGLLCTLNVVL

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(P*CP*CP*GP*AP*AP*TP*TP*CP*G)-3') c 9 NA CCGAATTCG
DNA (5'-D(P*CP*CP*GP*AP*AP*TP*TP*CP*G)-3') d 9 NA CCGAATTCG
DNA (5'-D(P*CP*CP*GP*AP*AP*TP*TP*CP*G)-3') f 9 NA CCGAATTCG
DNA (5'-D(P*CP*CP*GP*AP*AP*TP*TP*CP*G)-3') l 9 NA CCGAATTCG
DNA (5'-D(P*CP*CP*GP*AP*AP*TP*TP*CP*G)-3') h 9 NA CCGAATTCG
DNA (5'-D(P*CP*CP*GP*AP*AP*TP*TP*CP*G)-3') j 9 NA CCGAATTCG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2012-09-05
Deposition Author(s): Schellenberg, M.J. , Williams, R.S.