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3L2U

Crystal structure of the prototype foamy virus (pfv) intasome in complex with magnesium and gs9137 (elvitegravir)

PDB DOI: 10.2210/pdb3l2u/pdb

Classification: RECOMBINATION/DNA
Organism(s): Rhodococcus Sp. Ecu1013 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2009-12-15
Deposition Author(s): Cherepanov, P. , Gupta, S.S. , Hare, S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.15 Å

Literature

Crystal structure of the prototype foamy virus (pfv) intasome in complex with magnesium and gs9137 (elvitegravir)

Cherepanov, P. , Gupta, S.S. , Hare, S.

Primary Citation of Related Structures: 3L2U


Proteins
Molecule Chains Sequence Length Organism Sequence
Integrase A 395 Rhodococcus Sp. Ecu1013 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) GPGCNTKKPNLDAELDQLLQGHYIKGYPKQYTYFLEDGKVKVSRPEGVKIIPPQSDRQKIVLQAHNLAHTGREATLLKIANLYWWPNMRKDVVKQLGRCQQCLITNASNKASGPILRPDRPQKPFDKFFIDYIGPLPPSQGYLYVLVVVDGMTGFTWLYPTKAPSTSATVKSLNVLTSIAIPKVIHSDQGAAFTSSTFAEWAKERGIHLEFSTPYHPQSSGKVERKNSDIKRLLTKLLVGRPTKWYDLLPVVQLALNNTYSPVLKYTPHQLLFGIDSNTPFANQDTLDLTREEELSLLQEIRTSLYHPSTPPASSRSWSPVVGQLVQERVARPASLRPRWHKPSTVLKVLNPRTVVILDHLGNNRTVSIDNLKPTSHQNGTTNDTATMDHLEKNE
Integrase B 395 Rhodococcus Sp. Ecu1013 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) GPGCNTKKPNLDAELDQLLQGHYIKGYPKQYTYFLEDGKVKVSRPEGVKIIPPQSDRQKIVLQAHNLAHTGREATLLKIANLYWWPNMRKDVVKQLGRCQQCLITNASNKASGPILRPDRPQKPFDKFFIDYIGPLPPSQGYLYVLVVVDGMTGFTWLYPTKAPSTSATVKSLNVLTSIAIPKVIHSDQGAAFTSSTFAEWAKERGIHLEFSTPYHPQSSGKVERKNSDIKRLLTKLLVGRPTKWYDLLPVVQLALNNTYSPVLKYTPHQLLFGIDSNTPFANQDTLDLTREEELSLLQEIRTSLYHPSTPPASSRSWSPVVGQLVQERVARPASLRPRWHKPSTVLKVLNPRTVVILDHLGNNRTVSIDNLKPTSHQNGTTNDTATMDHLEKNE

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*TP*GP*TP*A)-3' c 19 NA ATTGTCATGGAATTTTGTA
5'-D(*TP*AP*CP*AP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3' d 17 NA TACAAAATTCCATGACA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2009-12-15
Deposition Author(s): Cherepanov, P. , Gupta, S.S. , Hare, S.