3IMB
Alternative binding mode of restriction endonuclease bcni to cognate dna
PDB DOI: 10.2210/pdb3imb/pdb
Classification: HYDROLASE/DNA Organism(s): Brevibacillus Centrosporus , Synthetic Construct
Deposited: 2009-08-10 Deposition Author(s): Bochtler, M. , Czapinska, H. , Kaus-Drobek, M. , Siksnys, V. , Sokolowska, M. , Szczepanowski, R.H. , Tamulaitis, G.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 1.89 Å
Alternative binding mode of restriction endonuclease bcni to cognate dna
Bochtler, M. , Czapinska, H. , Kaus-Drobek, M. , Siksnys, V. , Sokolowska, M. , Szczepanowski, R.H. , Tamulaitis, G.
Primary Citation of Related Structures: 3IMB
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| R.BcnI | A | 238 | Brevibacillus Centrosporus , Synthetic Construct | MKIWSKEEVVNKLHEIKNKGYLSVPTDMFRTDDGVVGQILERQFGVQENNITLGDLGEFELKGMRNRKAKSNLTLFHKKPVAGQTVIQIFNRFGYVKPSSRNPEVMKKKLFTTIKGGRLNNLGLTLNAKHASEINLYYQDEYLSTWDLNLSKIEKLVLVFAETIGRANSPEEQFHFTKAYMLTEINDITSLINDGVLVMDLCIDQDLSKSKGPHDRGPHLRIPISKLDKLYRNIERLL |
| R.BcnI | B | 238 | Brevibacillus Centrosporus , Synthetic Construct | MKIWSKEEVVNKLHEIKNKGYLSVPTDMFRTDDGVVGQILERQFGVQENNITLGDLGEFELKGMRNRKAKSNLTLFHKKPVAGQTVIQIFNRFGYVKPSSRNPEVMKKKLFTTIKGGRLNNLGLTLNAKHASEINLYYQDEYLSTWDLNLSKIEKLVLVFAETIGRANSPEEQFHFTKAYMLTEINDITSLINDGVLVMDLCIDQDLSKSKGPHDRGPHLRIPISKLDKLYRNIERLL |
| R.BcnI | C | 238 | Brevibacillus Centrosporus , Synthetic Construct | MKIWSKEEVVNKLHEIKNKGYLSVPTDMFRTDDGVVGQILERQFGVQENNITLGDLGEFELKGMRNRKAKSNLTLFHKKPVAGQTVIQIFNRFGYVKPSSRNPEVMKKKLFTTIKGGRLNNLGLTLNAKHASEINLYYQDEYLSTWDLNLSKIEKLVLVFAETIGRANSPEEQFHFTKAYMLTEINDITSLINDGVLVMDLCIDQDLSKSKGPHDRGPHLRIPISKLDKLYRNIERLL |
| R.BcnI | D | 238 | Brevibacillus Centrosporus , Synthetic Construct | MKIWSKEEVVNKLHEIKNKGYLSVPTDMFRTDDGVVGQILERQFGVQENNITLGDLGEFELKGMRNRKAKSNLTLFHKKPVAGQTVIQIFNRFGYVKPSSRNPEVMKKKLFTTIKGGRLNNLGLTLNAKHASEINLYYQDEYLSTWDLNLSKIEKLVLVFAETIGRANSPEEQFHFTKAYMLTEINDITSLINDGVLVMDLCIDQDLSKSKGPHDRGPHLRIPISKLDKLYRNIERLL |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 5'-D(*GP*TP*CP*CP*GP*GP*GP*CP*G)-3' | e | 9 | NA | GTCCGGGCG |
| 5'-D(*GP*TP*CP*CP*GP*GP*GP*CP*G)-3' | g | 9 | NA | GTCCGGGCG |
| 5'-D(*GP*TP*CP*CP*GP*GP*GP*CP*G)-3' | i | 9 | NA | GTCCGGGCG |
| 5'-D(*GP*TP*CP*CP*GP*GP*GP*CP*G)-3' | k | 9 | NA | GTCCGGGCG |
| 5'-D(*CP*GP*CP*CP*CP*GP*GP*AP*C)-3' | f | 9 | NA | CGCCCGGAC |
| 5'-D(*CP*GP*CP*CP*CP*GP*GP*AP*C)-3' | h | 9 | NA | CGCCCGGAC |
| 5'-D(*CP*GP*CP*CP*CP*GP*GP*AP*C)-3' | j | 9 | NA | CGCCCGGAC |
| 5'-D(*CP*GP*CP*CP*CP*GP*GP*AP*C)-3' | l | 9 | NA | CGCCCGGAC |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2009-08-10 Deposition Author(s): Bochtler, M. , Czapinska, H. , Kaus-Drobek, M. , Siksnys, V. , Sokolowska, M. , Szczepanowski, R.H. , Tamulaitis, G.