Nikr-operator dna complex
PDB DOI: 10.2210/pdb2hzv/pdb
Classification: METAL BINDING PROTEIN/DNA Organism(s): Escherichia Coli , Synthetic Construct
Deposited: 2006-08-09 Deposition Author(s): Drennan, C.L. , Schreiter, E.R.
Nikr-operator dna complex
Drennan, C.L. , Schreiter, E.R.
Primary Citation of Related Structures: 2HZV
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 5'-D(*AP*GP*TP*AP*TP*GP*AP*CP*GP*AP*AP*TP*AP*CP*TP*TP*AP*AP*AP*AP*TP*CP*GP*TP*CP*AP*TP*AP*CP*T)-3' | i | 30 | NA | AGTATGACGAATACTTAAAATCGTCATACT |
| 5'-D(*AP*GP*TP*AP*TP*GP*AP*CP*GP*AP*AP*TP*AP*CP*TP*TP*AP*AP*AP*AP*TP*CP*GP*TP*CP*AP*TP*AP*CP*T)-3' | k | 30 | NA | AGTATGACGAATACTTAAAATCGTCATACT |
| 5'-D(*AP*GP*TP*AP*TP*GP*AP*CP*GP*AP*TP*TP*TP*TP*AP*AP*GP*TP*AP*TP*TP*CP*GP*TP*CP*AP*TP*AP*CP*T)-3' | j | 30 | NA | AGTATGACGATTTTAAGTATTCGTCATACT |
| 5'-D(*AP*GP*TP*AP*TP*GP*AP*CP*GP*AP*TP*TP*TP*TP*AP*AP*GP*TP*AP*TP*TP*CP*GP*TP*CP*AP*TP*AP*CP*T)-3' | l | 30 | NA | AGTATGACGATTTTAAGTATTCGTCATACT |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Nickel-responsive regulator | A | 133 | Escherichia Coli , Synthetic Construct | MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVRHGHLQCLPKED |
| Nickel-responsive regulator | B | 133 | Escherichia Coli , Synthetic Construct | MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVRHGHLQCLPKED |
| Nickel-responsive regulator | C | 133 | Escherichia Coli , Synthetic Construct | MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVRHGHLQCLPKED |
| Nickel-responsive regulator | D | 133 | Escherichia Coli , Synthetic Construct | MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVRHGHLQCLPKED |
| Nickel-responsive regulator | E | 133 | Escherichia Coli , Synthetic Construct | MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVRHGHLQCLPKED |
| Nickel-responsive regulator | F | 133 | Escherichia Coli , Synthetic Construct | MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVRHGHLQCLPKED |
| Nickel-responsive regulator | G | 133 | Escherichia Coli , Synthetic Construct | MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVRHGHLQCLPKED |
| Nickel-responsive regulator | H | 133 | Escherichia Coli , Synthetic Construct | MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVRHGHLQCLPKED |
Method: X-RAY DIFFRACTION
Deposited Date: 2006-08-09 Deposition Author(s): Drennan, C.L. , Schreiter, E.R.