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FASTA Sequence PDB Format mmCIF Format
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1RFI

Crystal structure of human tyrosyl-dna phosphodiesterase complexed with vanadate, pentapeptide klnyk, and tetranucleotide agtc

PDB DOI: 10.2210/pdb1rfi/pdb

Classification: HYDROLASE/DNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2003-11-10
Deposition Author(s): Champoux, J.J. , Davies, D.R. , Hol, W.G. , Interthal, H.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.2 Å

1rfi
Literature

Crystal structure of human tyrosyl-dna phosphodiesterase complexed with vanadate, pentapeptide klnyk, and tetranucleotide agtc

Champoux, J.J. , Davies, D.R. , Hol, W.G. , Interthal, H.

Primary Citation of Related Structures: 1RFI


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*AP*GP*TP*C)-3' d 4 NA AGTC
5'-D(*AP*GP*TP*C)-3' f 4 NA AGTC

Proteins
Molecule Chains Sequence Length Organism Sequence
Tyrosyl-DNA phosphodiesterase 1 A 485 Homo Sapiens , Synthetic Construct MGSSHHHHHHSSGLVPRGSHMLEDPGEGQDIWDMLDKGNPFQFYLTRVSGVKPKYNSGALHIKDILSPLFGTLVSSAQFNYCFDVDWLVKQYPPEFRKKPILLVHGDKREAKAHLHAQAKPYENISLCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSNLIHADWHQKTQGIWLSPLYPRIADGTHKSGESPTHFKANLISYLTAYNAPSLKEWIDVIHKHDLSETNVYLIGSTPGRFQGSQKDNWGHFRLKKLLKDHASSMPNAESWPVVGQFSSVGSLGADESKWLCSEFKESMLTLGKESKTPGKSSVPLYLIYPSVENVRTSLEGYPAGGSLPYSIQTAEKQNWLHSYFHKWSAETSGRSNAMPHIKTYMRPSPDFSKIAWFLVTSANLSKAAWGALEKNGTQLMIRSYELGVLFLPSALGLDSFKVKQKFFAGSQEPMATFPVPYDLPPELYGSKDRPWIWNIPYVKAPDTHGNMWVPS
Tyrosyl-DNA phosphodiesterase 1 B 485 Homo Sapiens , Synthetic Construct MGSSHHHHHHSSGLVPRGSHMLEDPGEGQDIWDMLDKGNPFQFYLTRVSGVKPKYNSGALHIKDILSPLFGTLVSSAQFNYCFDVDWLVKQYPPEFRKKPILLVHGDKREAKAHLHAQAKPYENISLCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSNLIHADWHQKTQGIWLSPLYPRIADGTHKSGESPTHFKANLISYLTAYNAPSLKEWIDVIHKHDLSETNVYLIGSTPGRFQGSQKDNWGHFRLKKLLKDHASSMPNAESWPVVGQFSSVGSLGADESKWLCSEFKESMLTLGKESKTPGKSSVPLYLIYPSVENVRTSLEGYPAGGSLPYSIQTAEKQNWLHSYFHKWSAETSGRSNAMPHIKTYMRPSPDFSKIAWFLVTSANLSKAAWGALEKNGTQLMIRSYELGVLFLPSALGLDSFKVKQKFFAGSQEPMATFPVPYDLPPELYGSKDRPWIWNIPYVKAPDTHGNMWVPS
Topoisomerase I-Derived Peptide C 5 Homo Sapiens , Synthetic Construct KLNYK
Topoisomerase I-Derived Peptide E 5 Homo Sapiens , Synthetic Construct KLNYK
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2003-11-10
Deposition Author(s): Champoux, J.J. , Davies, D.R. , Hol, W.G. , Interthal, H.