data_9OKU
#
_entry.id 9OKU
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.407
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 9OKU pdb_00009oku 10.2210/pdb9oku/pdb
WWPDB D_1000294997 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
_pdbx_audit_revision_history.part_number
1 'Structure model' 1 0 2025-10-22 ?
2 'Structure model' 1 1 2025-11-26 ?
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
_pdbx_audit_revision_group.ordinal 1
_pdbx_audit_revision_group.revision_ordinal 2
_pdbx_audit_revision_group.data_content_type 'Structure model'
_pdbx_audit_revision_group.group 'Database references'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 2 'Structure model' citation
2 2 'Structure model' citation_author
#
_pdbx_database_status.status_code REL
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.entry_id 9OKU
_pdbx_database_status.recvd_initial_deposition_date 2025-05-11
_pdbx_database_status.SG_entry N
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.pdb_format_compatible Y
#
_pdbx_contact_author.id 2
_pdbx_contact_author.email jwszostak@uchicago.edu
_pdbx_contact_author.name_first Jack
_pdbx_contact_author.name_last Szostak
_pdbx_contact_author.name_mi W
_pdbx_contact_author.role 'principal investigator/group leader'
_pdbx_contact_author.identifier_ORCID 0000-0003-4131-1203
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
_audit_author.identifier_ORCID
'Fang, Z.' 1 0000-0001-8679-6633
'Szostak, J.W.' 2 0000-0003-4131-1203
#
loop_
_citation.abstract
_citation.abstract_id_CAS
_citation.book_id_ISBN
_citation.book_publisher
_citation.book_publisher_city
_citation.book_title
_citation.coordinate_linkage
_citation.country
_citation.database_id_Medline
_citation.details
_citation.id
_citation.journal_abbrev
_citation.journal_id_ASTM
_citation.journal_id_CSD
_citation.journal_id_ISSN
_citation.journal_full
_citation.journal_issue
_citation.journal_volume
_citation.language
_citation.page_first
_citation.page_last
_citation.title
_citation.year
_citation.database_id_CSD
_citation.pdbx_database_id_DOI
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_patent
_citation.unpublished_flag
? ? ? ? ? ? ? UK ? ? primary 'Nucleic Acids Res.' NARHAD 0389 1362-4962 ? ? 53 ? ? ?
;Impact of 2'-deoxyribo-purine substrates on nonenzymatic RNA template-directed primer extension.
;
2025 ? 10.1093/nar/gkaf1228 41261857 ? ?
? ? ? ? ? ? ? US ? ? 1 Biorxiv ? ? 2692-8205 ? ? ? ? ? ?
;Impact of 2'-deoxyribo-purine substrates on nonenzymatic RNA template-directed primer extension.
;
2025 ? 10.1101/2025.08.29.673048 40909494 ? ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Fang, Z.' 1 0000-0001-8679-6633
primary 'Acikgoz, O.' 2 ?
primary 'Jia, X.' 3 0000-0001-9094-9882
primary 'Essex, J.' 4 ?
primary 'Wen, R.' 5 ?
primary 'Szostak, J.W.' 6 0000-0003-4131-1203
1 'Fang, Z.' 7 0000-0001-8679-6633
1 'Acikgoz, O.' 8 0009-0001-3296-1637
1 'Jia, X.' 9 0000-0001-9094-9882
1 'Essex, J.' 10 0009-0003-6281-4798
1 'Wen, R.' 11 ?
1 'Szostak, J.W.' 12 0000-0003-4131-1203
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn
;DNA/RNA (5'-R(*AP*GP*AP*G)-D(P*A)-R(P*AP*GP*AP*UP*CP*U)-3')
;
5083.130 1 ? ? ? ?
2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ?
3 water nat water 18.015 101 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type 'polydeoxyribonucleotide/polyribonucleotide hybrid'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer yes
_entity_poly.pdbx_seq_one_letter_code 'AGAG(DA)AGAUCU(SUR)CUCU'
_entity_poly.pdbx_seq_one_letter_code_can AGAGAAGAUCUUCUCU
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2 'MAGNESIUM ION' MG
3 water HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 A n
1 2 G n
1 3 A n
1 4 G n
1 5 DA n
1 6 A n
1 7 G n
1 8 A n
1 9 U n
1 10 C n
1 11 U n
1 12 SUR n
1 13 C n
1 14 U n
1 15 C n
1 16 U n
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num 1
_pdbx_entity_src_syn.pdbx_end_seq_num 16
_pdbx_entity_src_syn.organism_scientific 'synthetic construct'
_pdbx_entity_src_syn.organism_common_name ?
_pdbx_entity_src_syn.ncbi_taxonomy_id 32630
_pdbx_entity_src_syn.details ?
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221
C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222
G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221
HOH non-polymer . WATER ? 'H2 O' 18.015
MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305
SUR 'RNA linking' n "1-(BETA-D-RIBOFURANOSYL)-2-THIO-URACIL-5'-PHOSPHATE" ? 'C9 H13 N2 O8 P S' 340.247
U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 A 1 1 1 A A A . n
A 1 2 G 2 2 2 G G A . n
A 1 3 A 3 3 3 A A A . n
A 1 4 G 4 4 4 G G A . n
A 1 5 DA 5 5 5 DA DA A . n
A 1 6 A 6 6 6 A A A . n
A 1 7 G 7 7 7 G G A . n
A 1 8 A 8 8 8 A A A . n
A 1 9 U 9 9 9 U U A . n
A 1 10 C 10 10 10 C C A . n
A 1 11 U 11 11 11 U U A . n
A 1 12 SUR 12 12 12 SUR SUR A . n
A 1 13 C 13 13 13 C C A . n
A 1 14 U 14 14 14 U U A . n
A 1 15 C 15 15 15 C C A . n
A 1 16 U 16 16 16 U U A . n
#
_pdbx_entity_instance_feature.ordinal 1
_pdbx_entity_instance_feature.comp_id SUR
_pdbx_entity_instance_feature.asym_id ?
_pdbx_entity_instance_feature.seq_num ?
_pdbx_entity_instance_feature.auth_comp_id SUR
_pdbx_entity_instance_feature.auth_asym_id ?
_pdbx_entity_instance_feature.auth_seq_num ?
_pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION'
_pdbx_entity_instance_feature.details ?
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MG 1 101 1 MG MG A .
C 3 HOH 1 201 40 HOH HOH A .
C 3 HOH 2 202 91 HOH HOH A .
C 3 HOH 3 203 103 HOH HOH A .
C 3 HOH 4 204 58 HOH HOH A .
C 3 HOH 5 205 96 HOH HOH A .
C 3 HOH 6 206 48 HOH HOH A .
C 3 HOH 7 207 74 HOH HOH A .
C 3 HOH 8 208 55 HOH HOH A .
C 3 HOH 9 209 73 HOH HOH A .
C 3 HOH 10 210 61 HOH HOH A .
C 3 HOH 11 211 39 HOH HOH A .
C 3 HOH 12 212 30 HOH HOH A .
C 3 HOH 13 213 21 HOH HOH A .
C 3 HOH 14 214 3 HOH HOH A .
C 3 HOH 15 215 15 HOH HOH A .
C 3 HOH 16 216 80 HOH HOH A .
C 3 HOH 17 217 57 HOH HOH A .
C 3 HOH 18 218 46 HOH HOH A .
C 3 HOH 19 219 41 HOH HOH A .
C 3 HOH 20 220 69 HOH HOH A .
C 3 HOH 21 221 9 HOH HOH A .
C 3 HOH 22 222 56 HOH HOH A .
C 3 HOH 23 223 24 HOH HOH A .
C 3 HOH 24 224 6 HOH HOH A .
C 3 HOH 25 225 101 HOH HOH A .
C 3 HOH 26 226 14 HOH HOH A .
C 3 HOH 27 227 88 HOH HOH A .
C 3 HOH 28 228 87 HOH HOH A .
C 3 HOH 29 229 67 HOH HOH A .
C 3 HOH 30 230 104 HOH HOH A .
C 3 HOH 31 231 34 HOH HOH A .
C 3 HOH 32 232 4 HOH HOH A .
C 3 HOH 33 233 28 HOH HOH A .
C 3 HOH 34 234 37 HOH HOH A .
C 3 HOH 35 235 78 HOH HOH A .
C 3 HOH 36 236 65 HOH HOH A .
C 3 HOH 37 237 50 HOH HOH A .
C 3 HOH 38 238 63 HOH HOH A .
C 3 HOH 39 239 35 HOH HOH A .
C 3 HOH 40 240 36 HOH HOH A .
C 3 HOH 41 241 5 HOH HOH A .
C 3 HOH 42 242 53 HOH HOH A .
C 3 HOH 43 243 29 HOH HOH A .
C 3 HOH 44 244 62 HOH HOH A .
C 3 HOH 45 245 17 HOH HOH A .
C 3 HOH 46 246 12 HOH HOH A .
C 3 HOH 47 247 102 HOH HOH A .
C 3 HOH 48 248 20 HOH HOH A .
C 3 HOH 49 249 8 HOH HOH A .
C 3 HOH 50 250 43 HOH HOH A .
C 3 HOH 51 251 2 HOH HOH A .
C 3 HOH 52 252 1 HOH HOH A .
C 3 HOH 53 253 31 HOH HOH A .
C 3 HOH 54 254 18 HOH HOH A .
C 3 HOH 55 255 59 HOH HOH A .
C 3 HOH 56 256 98 HOH HOH A .
C 3 HOH 57 257 38 HOH HOH A .
C 3 HOH 58 258 13 HOH HOH A .
C 3 HOH 59 259 22 HOH HOH A .
C 3 HOH 60 260 25 HOH HOH A .
C 3 HOH 61 261 97 HOH HOH A .
C 3 HOH 62 262 99 HOH HOH A .
C 3 HOH 63 263 83 HOH HOH A .
C 3 HOH 64 264 82 HOH HOH A .
C 3 HOH 65 265 33 HOH HOH A .
C 3 HOH 66 266 7 HOH HOH A .
C 3 HOH 67 267 75 HOH HOH A .
C 3 HOH 68 268 47 HOH HOH A .
C 3 HOH 69 269 52 HOH HOH A .
C 3 HOH 70 270 66 HOH HOH A .
C 3 HOH 71 271 27 HOH HOH A .
C 3 HOH 72 272 71 HOH HOH A .
C 3 HOH 73 273 95 HOH HOH A .
C 3 HOH 74 274 16 HOH HOH A .
C 3 HOH 75 275 23 HOH HOH A .
C 3 HOH 76 276 42 HOH HOH A .
C 3 HOH 77 277 64 HOH HOH A .
C 3 HOH 78 278 89 HOH HOH A .
C 3 HOH 79 279 77 HOH HOH A .
C 3 HOH 80 280 60 HOH HOH A .
C 3 HOH 81 281 19 HOH HOH A .
C 3 HOH 82 282 68 HOH HOH A .
C 3 HOH 83 283 11 HOH HOH A .
C 3 HOH 84 284 92 HOH HOH A .
C 3 HOH 85 285 54 HOH HOH A .
C 3 HOH 86 286 45 HOH HOH A .
C 3 HOH 87 287 72 HOH HOH A .
C 3 HOH 88 288 100 HOH HOH A .
C 3 HOH 89 289 84 HOH HOH A .
C 3 HOH 90 290 90 HOH HOH A .
C 3 HOH 91 291 70 HOH HOH A .
C 3 HOH 92 292 44 HOH HOH A .
C 3 HOH 93 293 10 HOH HOH A .
C 3 HOH 94 294 93 HOH HOH A .
C 3 HOH 95 295 79 HOH HOH A .
C 3 HOH 96 296 76 HOH HOH A .
C 3 HOH 97 297 81 HOH HOH A .
C 3 HOH 98 298 85 HOH HOH A .
C 3 HOH 99 299 86 HOH HOH A .
C 3 HOH 100 300 105 HOH HOH A .
C 3 HOH 101 301 94 HOH HOH A .
#
loop_
_software.citation_id
_software.classification
_software.compiler_name
_software.compiler_version
_software.contact_author
_software.contact_author_email
_software.date
_software.description
_software.dependencies
_software.hardware
_software.language
_software.location
_software.mods
_software.name
_software.os
_software.os_version
_software.type
_software.version
_software.pdbx_reference_DOI
_software.pdbx_ordinal
? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0425 ? 1
? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . ? 2
? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . ? 3
? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . ? 4
#
_cell.angle_alpha 90.000
_cell.angle_alpha_esd ?
_cell.angle_beta 90.000
_cell.angle_beta_esd ?
_cell.angle_gamma 120.000
_cell.angle_gamma_esd ?
_cell.entry_id 9OKU
_cell.details ?
_cell.formula_units_Z ?
_cell.length_a 41.167
_cell.length_a_esd ?
_cell.length_b 41.167
_cell.length_b_esd ?
_cell.length_c 124.563
_cell.length_c_esd ?
_cell.volume ?
_cell.volume_esd ?
_cell.Z_PDB 18
_cell.reciprocal_angle_alpha ?
_cell.reciprocal_angle_beta ?
_cell.reciprocal_angle_gamma ?
_cell.reciprocal_angle_alpha_esd ?
_cell.reciprocal_angle_beta_esd ?
_cell.reciprocal_angle_gamma_esd ?
_cell.reciprocal_length_a ?
_cell.reciprocal_length_b ?
_cell.reciprocal_length_c ?
_cell.reciprocal_length_a_esd ?
_cell.reciprocal_length_b_esd ?
_cell.reciprocal_length_c_esd ?
_cell.pdbx_unique_axis ?
_cell.pdbx_esd_method ?
#
_symmetry.entry_id 9OKU
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 155
_symmetry.space_group_name_Hall ?
_symmetry.space_group_name_H-M 'H 3 2'
_symmetry.pdbx_full_space_group_name_H-M ?
#
_exptl.absorpt_coefficient_mu ?
_exptl.absorpt_correction_T_max ?
_exptl.absorpt_correction_T_min ?
_exptl.absorpt_correction_type ?
_exptl.absorpt_process_details ?
_exptl.entry_id 9OKU
_exptl.crystals_number 1
_exptl.details ?
_exptl.method 'X-RAY DIFFRACTION'
_exptl.method_details ?
#
_exptl_crystal.colour ?
_exptl_crystal.density_diffrn ?
_exptl_crystal.density_Matthews 1.99
_exptl_crystal.density_method ?
_exptl_crystal.density_percent_sol 38.25
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.id 1
_exptl_crystal.preparation ?
_exptl_crystal.size_max ?
_exptl_crystal.size_mid ?
_exptl_crystal.size_min ?
_exptl_crystal.size_rad ?
_exptl_crystal.colour_lustre ?
_exptl_crystal.colour_modifier ?
_exptl_crystal.colour_primary ?
_exptl_crystal.density_meas ?
_exptl_crystal.density_meas_esd ?
_exptl_crystal.density_meas_gt ?
_exptl_crystal.density_meas_lt ?
_exptl_crystal.density_meas_temp ?
_exptl_crystal.density_meas_temp_esd ?
_exptl_crystal.density_meas_temp_gt ?
_exptl_crystal.density_meas_temp_lt ?
_exptl_crystal.pdbx_crystal_image_url ?
_exptl_crystal.pdbx_crystal_image_format ?
_exptl_crystal.pdbx_mosaicity ?
_exptl_crystal.pdbx_mosaicity_esd ?
_exptl_crystal.pdbx_mosaic_method ?
_exptl_crystal.pdbx_mosaic_block_size ?
_exptl_crystal.pdbx_mosaic_block_size_esd ?
#
_exptl_crystal_grow.apparatus ?
_exptl_crystal_grow.atmosphere ?
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.details ?
_exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP'
_exptl_crystal_grow.method_ref ?
_exptl_crystal_grow.pH 7.5
_exptl_crystal_grow.pressure ?
_exptl_crystal_grow.pressure_esd ?
_exptl_crystal_grow.seeding ?
_exptl_crystal_grow.seeding_ref ?
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.temp_esd ?
_exptl_crystal_grow.time ?
_exptl_crystal_grow.pdbx_details
'0.2 M Magnesium chloride hexahydrate, 0.1 M HEPES sodium pH 7.5, 30% v/v Polyethylene glycol 400'
_exptl_crystal_grow.pdbx_pH_range ?
_exptl_crystal_grow.temp 293
#
_diffrn.ambient_environment ?
_diffrn.ambient_temp 99
_diffrn.ambient_temp_details ?
_diffrn.ambient_temp_esd ?
_diffrn.crystal_id 1
_diffrn.crystal_support ?
_diffrn.crystal_treatment ?
_diffrn.details ?
_diffrn.id 1
_diffrn.ambient_pressure ?
_diffrn.ambient_pressure_esd ?
_diffrn.ambient_pressure_gt ?
_diffrn.ambient_pressure_lt ?
_diffrn.ambient_temp_gt ?
_diffrn.ambient_temp_lt ?
_diffrn.pdbx_serial_crystal_experiment N
#
_diffrn_detector.details ?
_diffrn_detector.detector PIXEL
_diffrn_detector.diffrn_id 1
_diffrn_detector.type 'DECTRIS PILATUS3 2M'
_diffrn_detector.area_resol_mean ?
_diffrn_detector.dtime ?
_diffrn_detector.pdbx_frames_total ?
_diffrn_detector.pdbx_collection_time_total ?
_diffrn_detector.pdbx_collection_date 2024-10-30
_diffrn_detector.pdbx_frequency ?
_diffrn_detector.id ?
_diffrn_detector.number_of_axes ?
#
_diffrn_radiation.collimation ?
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.filter_edge ?
_diffrn_radiation.inhomogeneity ?
_diffrn_radiation.monochromator ?
_diffrn_radiation.polarisn_norm ?
_diffrn_radiation.polarisn_ratio ?
_diffrn_radiation.probe ?
_diffrn_radiation.type ?
_diffrn_radiation.xray_symbol ?
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.pdbx_wavelength_list ?
_diffrn_radiation.pdbx_wavelength ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_analyzer ?
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 0.97741
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.current ?
_diffrn_source.details ?
_diffrn_source.diffrn_id 1
_diffrn_source.power ?
_diffrn_source.size ?
_diffrn_source.source SYNCHROTRON
_diffrn_source.target ?
_diffrn_source.type 'ALS BEAMLINE 5.0.1'
_diffrn_source.voltage ?
_diffrn_source.take-off_angle ?
_diffrn_source.pdbx_wavelength_list 0.97741
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_synchrotron_beamline 5.0.1
_diffrn_source.pdbx_synchrotron_site ALS
#
_reflns.B_iso_Wilson_estimate ?
_reflns.entry_id 9OKU
_reflns.data_reduction_details ?
_reflns.data_reduction_method ?
_reflns.d_resolution_high 1.479
_reflns.d_resolution_low 50
_reflns.details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.number_all ?
_reflns.number_obs 7122
_reflns.observed_criterion ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.observed_criterion_I_max ?
_reflns.observed_criterion_I_min ?
_reflns.observed_criterion_sigma_F ?
_reflns.observed_criterion_sigma_I ?
_reflns.percent_possible_obs 100
_reflns.R_free_details ?
_reflns.Rmerge_F_all ?
_reflns.Rmerge_F_obs ?
_reflns.Friedel_coverage ?
_reflns.number_gt ?
_reflns.threshold_expression ?
_reflns.pdbx_redundancy 9.4
_reflns.pdbx_netI_over_av_sigmaI ?
_reflns.pdbx_netI_over_sigmaI 33.0
_reflns.pdbx_res_netI_over_av_sigmaI_2 ?
_reflns.pdbx_res_netI_over_sigmaI_2 ?
_reflns.pdbx_chi_squared 0.982
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_d_res_high_opt ?
_reflns.pdbx_d_res_low_opt ?
_reflns.pdbx_d_res_opt_method ?
_reflns.phase_calculation_details ?
_reflns.pdbx_Rrim_I_all 0.065
_reflns.pdbx_Rpim_I_all 0.022
_reflns.pdbx_d_opt ?
_reflns.pdbx_number_measured_all ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
_reflns.pdbx_CC_half 1.00
_reflns.pdbx_CC_star 1.00
_reflns.pdbx_R_split ?
_reflns.pdbx_Rmerge_I_obs 0.061
_reflns.pdbx_Rmerge_I_all ?
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_CC_split_method ?
_reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ?
_reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ?
_reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ?
_reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ?
_reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ?
_reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ?
_reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ?
_reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ?
_reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ?
_reflns.pdbx_aniso_diffraction_limit_1 ?
_reflns.pdbx_aniso_diffraction_limit_2 ?
_reflns.pdbx_aniso_diffraction_limit_3 ?
_reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ?
_reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ?
_reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ?
_reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ?
_reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ?
_reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ?
_reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ?
_reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ?
_reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ?
_reflns.pdbx_aniso_B_tensor_eigenvalue_1 ?
_reflns.pdbx_aniso_B_tensor_eigenvalue_2 ?
_reflns.pdbx_aniso_B_tensor_eigenvalue_3 ?
_reflns.pdbx_orthogonalization_convention ?
_reflns.pdbx_percent_possible_ellipsoidal ?
_reflns.pdbx_percent_possible_spherical ?
_reflns.pdbx_percent_possible_ellipsoidal_anomalous ?
_reflns.pdbx_percent_possible_spherical_anomalous ?
_reflns.pdbx_redundancy_anomalous ?
_reflns.pdbx_CC_half_anomalous ?
_reflns.pdbx_absDiff_over_sigma_anomalous ?
_reflns.pdbx_percent_possible_anomalous ?
_reflns.pdbx_observed_signal_threshold ?
_reflns.pdbx_signal_type ?
_reflns.pdbx_signal_details ?
_reflns.pdbx_signal_software_id ?
#
_reflns_shell.d_res_high 1.479
_reflns_shell.d_res_low 1.51
_reflns_shell.meanI_over_sigI_all ?
_reflns_shell.meanI_over_sigI_obs 3.5
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_possible ?
_reflns_shell.number_unique_all ?
_reflns_shell.number_unique_obs 344
_reflns_shell.percent_possible_obs ?
_reflns_shell.Rmerge_F_all ?
_reflns_shell.Rmerge_F_obs ?
_reflns_shell.meanI_over_sigI_gt ?
_reflns_shell.meanI_over_uI_all ?
_reflns_shell.meanI_over_uI_gt ?
_reflns_shell.number_measured_gt ?
_reflns_shell.number_unique_gt ?
_reflns_shell.percent_possible_gt ?
_reflns_shell.Rmerge_F_gt ?
_reflns_shell.Rmerge_I_gt ?
_reflns_shell.pdbx_redundancy 8.6
_reflns_shell.pdbx_chi_squared 0.931
_reflns_shell.pdbx_netI_over_sigmaI_all ?
_reflns_shell.pdbx_netI_over_sigmaI_obs ?
_reflns_shell.pdbx_Rrim_I_all 0.609
_reflns_shell.pdbx_Rpim_I_all 0.204
_reflns_shell.pdbx_rejects ?
_reflns_shell.pdbx_ordinal 1
_reflns_shell.pdbx_diffrn_id 1
_reflns_shell.pdbx_CC_half 0.901
_reflns_shell.pdbx_CC_star 0.974
_reflns_shell.pdbx_R_split ?
_reflns_shell.percent_possible_all 100
_reflns_shell.Rmerge_I_all ?
_reflns_shell.Rmerge_I_obs 0.573
_reflns_shell.pdbx_Rsym_value ?
_reflns_shell.pdbx_percent_possible_ellipsoidal ?
_reflns_shell.pdbx_percent_possible_spherical ?
_reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ?
_reflns_shell.pdbx_percent_possible_spherical_anomalous ?
_reflns_shell.pdbx_redundancy_anomalous ?
_reflns_shell.pdbx_CC_half_anomalous ?
_reflns_shell.pdbx_absDiff_over_sigma_anomalous ?
_reflns_shell.pdbx_percent_possible_anomalous ?
#
_refine.aniso_B[1][1] -0.000
_refine.aniso_B[1][2] -0.000
_refine.aniso_B[1][3] 0.000
_refine.aniso_B[2][2] -0.000
_refine.aniso_B[2][3] 0.000
_refine.aniso_B[3][3] 0.000
_refine.B_iso_max ?
_refine.B_iso_mean 11.489
_refine.B_iso_min ?
_refine.correlation_coeff_Fo_to_Fc 0.973
_refine.correlation_coeff_Fo_to_Fc_free 0.959
_refine.details 'Hydrogens have been added in their riding positions'
_refine.diff_density_max ?
_refine.diff_density_max_esd ?
_refine.diff_density_min ?
_refine.diff_density_min_esd ?
_refine.diff_density_rms ?
_refine.diff_density_rms_esd ?
_refine.entry_id 9OKU
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.ls_abs_structure_details ?
_refine.ls_abs_structure_Flack ?
_refine.ls_abs_structure_Flack_esd ?
_refine.ls_abs_structure_Rogers ?
_refine.ls_abs_structure_Rogers_esd ?
_refine.ls_d_res_high 1.479
_refine.ls_d_res_low 41.521
_refine.ls_extinction_coef ?
_refine.ls_extinction_coef_esd ?
_refine.ls_extinction_expression ?
_refine.ls_extinction_method ?
_refine.ls_goodness_of_fit_all ?
_refine.ls_goodness_of_fit_all_esd ?
_refine.ls_goodness_of_fit_obs ?
_refine.ls_goodness_of_fit_obs_esd ?
_refine.ls_hydrogen_treatment ?
_refine.ls_matrix_type ?
_refine.ls_number_constraints ?
_refine.ls_number_parameters ?
_refine.ls_number_reflns_all ?
_refine.ls_number_reflns_obs 7109
_refine.ls_number_reflns_R_free 348
_refine.ls_number_reflns_R_work 6761
_refine.ls_number_restraints ?
_refine.ls_percent_reflns_obs 99.789
_refine.ls_percent_reflns_R_free 4.895
_refine.ls_R_factor_all 0.172
_refine.ls_R_factor_obs ?
_refine.ls_R_factor_R_free 0.2115
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_R_factor_R_work 0.1697
_refine.ls_R_Fsqd_factor_obs ?
_refine.ls_R_I_factor_obs ?
_refine.ls_redundancy_reflns_all ?
_refine.ls_redundancy_reflns_obs ?
_refine.ls_restrained_S_all ?
_refine.ls_restrained_S_obs ?
_refine.ls_shift_over_esd_max ?
_refine.ls_shift_over_esd_mean ?
_refine.ls_structure_factor_coef ?
_refine.ls_weighting_details ?
_refine.ls_weighting_scheme ?
_refine.ls_wR_factor_all ?
_refine.ls_wR_factor_obs ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.occupancy_max ?
_refine.occupancy_min ?
_refine.solvent_model_details 'MASK BULK SOLVENT'
_refine.solvent_model_param_bsol ?
_refine.solvent_model_param_ksol ?
_refine.correlation_coeff_I_to_Fcsqd_work ?
_refine.correlation_coeff_I_to_Fcsqd_free ?
_refine.pdbx_R_complete ?
_refine.ls_R_factor_gt ?
_refine.ls_goodness_of_fit_gt ?
_refine.ls_goodness_of_fit_ref ?
_refine.ls_shift_over_su_max ?
_refine.ls_shift_over_su_max_lt ?
_refine.ls_shift_over_su_mean ?
_refine.ls_shift_over_su_mean_lt ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F ?
_refine.pdbx_ls_sigma_Fsqd ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_starting_model ?
_refine.pdbx_stereochemistry_target_values ?
_refine.pdbx_R_Free_selection_details ?
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_overall_ESU_R 0.075
_refine.pdbx_overall_ESU_R_Free 0.081
_refine.pdbx_solvent_vdw_probe_radii 1.200
_refine.pdbx_solvent_ion_probe_radii 0.800
_refine.pdbx_solvent_shrinkage_radii 0.800
_refine.pdbx_real_space_R ?
_refine.pdbx_density_correlation ?
_refine.pdbx_pd_number_of_powder_patterns ?
_refine.pdbx_pd_number_of_points ?
_refine.pdbx_pd_meas_number_of_points ?
_refine.pdbx_pd_proc_ls_prof_R_factor ?
_refine.pdbx_pd_proc_ls_prof_wR_factor ?
_refine.pdbx_pd_Marquardt_correlation_coeff ?
_refine.pdbx_pd_Fsqrd_R_factor ?
_refine.pdbx_pd_ls_matrix_band_width ?
_refine.pdbx_overall_phase_error ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_diffrn_id 1
_refine.overall_SU_B 1.380
_refine.overall_SU_ML 0.051
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_average_fsc_overall ?
_refine.pdbx_average_fsc_work ?
_refine.pdbx_average_fsc_free ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.details ?
_refine_hist.d_res_high 1.479
_refine_hist.d_res_low 41.521
_refine_hist.number_atoms_solvent 101
_refine_hist.number_atoms_total 437
_refine_hist.number_reflns_all ?
_refine_hist.number_reflns_obs ?
_refine_hist.number_reflns_R_free ?
_refine_hist.number_reflns_R_work ?
_refine_hist.R_factor_all ?
_refine_hist.R_factor_obs ?
_refine_hist.R_factor_R_free ?
_refine_hist.R_factor_R_work ?
_refine_hist.pdbx_number_residues_total ?
_refine_hist.pdbx_B_iso_mean_ligand ?
_refine_hist.pdbx_B_iso_mean_solvent ?
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 335
_refine_hist.pdbx_number_atoms_ligand 1
_refine_hist.pdbx_number_atoms_lipid ?
_refine_hist.pdbx_number_atoms_carb ?
_refine_hist.pdbx_pseudo_atom_details ?
#
loop_
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.criterion
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.number
_refine_ls_restr.rejects
_refine_ls_restr.type
_refine_ls_restr.weight
_refine_ls_restr.pdbx_Zscore
_refine_ls_restr.pdbx_restraint_function
'X-RAY DIFFRACTION' ? 0.011 0.012 374 ? r_bond_refined_d ? ? ?
'X-RAY DIFFRACTION' ? 0.029 0.019 159 ? r_bond_other_d ? ? ?
'X-RAY DIFFRACTION' ? 1.982 1.890 572 ? r_angle_refined_deg ? ? ?
'X-RAY DIFFRACTION' ? 2.699 1.778 386 ? r_angle_other_deg ? ? ?
'X-RAY DIFFRACTION' ? 0.083 5.000 11 ? r_dihedral_angle_other_2_deg ? ? ?
'X-RAY DIFFRACTION' ? 0.078 0.200 76 ? r_chiral_restr ? ? ?
'X-RAY DIFFRACTION' ? 2.401 0.200 2 ? r_chiral_restr_other ? ? ?
'X-RAY DIFFRACTION' ? 0.027 0.020 185 ? r_gen_planes_refined ? ? ?
'X-RAY DIFFRACTION' ? 0.001 0.020 59 ? r_gen_planes_other ? ? ?
'X-RAY DIFFRACTION' ? 0.113 0.200 36 ? r_nbd_refined ? ? ?
'X-RAY DIFFRACTION' ? 0.198 0.200 164 ? r_symmetry_nbd_other ? ? ?
'X-RAY DIFFRACTION' ? 0.249 0.200 137 ? r_nbtor_refined ? ? ?
'X-RAY DIFFRACTION' ? 0.080 0.200 100 ? r_symmetry_nbtor_other ? ? ?
'X-RAY DIFFRACTION' ? 0.233 0.200 68 ? r_xyhbond_nbd_refined ? ? ?
'X-RAY DIFFRACTION' ? 0.029 0.200 2 ? r_metal_ion_refined ? ? ?
'X-RAY DIFFRACTION' ? 0.080 0.200 11 ? r_symmetry_nbd_refined ? ? ?
'X-RAY DIFFRACTION' ? 0.143 0.200 69 ? r_nbd_other ? ? ?
'X-RAY DIFFRACTION' ? 0.171 0.200 50 ? r_symmetry_xyhbond_nbd_refined ? ? ?
'X-RAY DIFFRACTION' ? 1.280 1.282 374 ? r_scbond_it ? ? ?
'X-RAY DIFFRACTION' ? 1.278 1.280 375 ? r_scbond_other ? ? ?
'X-RAY DIFFRACTION' ? 1.871 2.337 572 ? r_scangle_it ? ? ?
'X-RAY DIFFRACTION' ? 1.869 2.335 573 ? r_scangle_other ? ? ?
'X-RAY DIFFRACTION' ? 5.934 22.510 558 ? r_lrange_it ? ? ?
'X-RAY DIFFRACTION' ? 5.420 18.708 519 ? r_lrange_other ? ? ?
#
loop_
_refine_ls_shell.pdbx_refine_id
_refine_ls_shell.d_res_high
_refine_ls_shell.d_res_low
_refine_ls_shell.number_reflns_all
_refine_ls_shell.number_reflns_obs
_refine_ls_shell.number_reflns_R_free
_refine_ls_shell.number_reflns_R_work
_refine_ls_shell.percent_reflns_obs
_refine_ls_shell.percent_reflns_R_free
_refine_ls_shell.R_factor_all
_refine_ls_shell.R_factor_obs
_refine_ls_shell.R_factor_R_free_error
_refine_ls_shell.R_factor_R_work
_refine_ls_shell.redundancy_reflns_all
_refine_ls_shell.redundancy_reflns_obs
_refine_ls_shell.wR_factor_all
_refine_ls_shell.wR_factor_obs
_refine_ls_shell.wR_factor_R_free
_refine_ls_shell.wR_factor_R_work
_refine_ls_shell.pdbx_R_complete
_refine_ls_shell.correlation_coeff_Fo_to_Fc
_refine_ls_shell.correlation_coeff_Fo_to_Fc_free
_refine_ls_shell.correlation_coeff_I_to_Fcsqd_work
_refine_ls_shell.correlation_coeff_I_to_Fcsqd_free
_refine_ls_shell.pdbx_total_number_of_bins_used
_refine_ls_shell.pdbx_phase_error
_refine_ls_shell.pdbx_fsc_work
_refine_ls_shell.pdbx_fsc_free
_refine_ls_shell.R_factor_R_free
'X-RAY DIFFRACTION' 1.479 1.517 513 . 23 485 99.0253 . 0.269 . . 0.267 . . . . . 0.232 . . . . . 20 . 0.953 0.953 0.312
'X-RAY DIFFRACTION' 1.517 1.559 499 . 25 474 100.0000 . 0.220 . . 0.214 . . . . . 0.179 . . . . . 20 . 0.967 0.933 0.352
'X-RAY DIFFRACTION' 1.559 1.604 494 . 21 473 100.0000 . 0.199 . . 0.198 . . . . . 0.174 . . . . . 20 . 0.973 0.975 0.220
'X-RAY DIFFRACTION' 1.604 1.653 475 . 23 452 100.0000 . 0.191 . . 0.189 . . . . . 0.173 . . . . . 20 . 0.977 0.967 0.219
'X-RAY DIFFRACTION' 1.653 1.707 469 . 34 435 100.0000 . 0.187 . . 0.184 . . . . . 0.168 . . . . . 20 . 0.980 0.959 0.224
'X-RAY DIFFRACTION' 1.707 1.767 436 . 12 424 100.0000 . 0.180 . . 0.178 . . . . . 0.163 . . . . . 20 . 0.980 0.968 0.235
'X-RAY DIFFRACTION' 1.767 1.834 430 . 21 409 100.0000 . 0.162 . . 0.161 . . . . . 0.150 . . . . . 20 . 0.983 0.973 0.191
'X-RAY DIFFRACTION' 1.834 1.908 415 . 15 397 99.2771 . 0.192 . . 0.191 . . . . . 0.163 . . . . . 20 . 0.976 0.970 0.221
'X-RAY DIFFRACTION' 1.908 1.993 412 . 26 384 99.5146 . 0.202 . . 0.200 . . . . . 0.184 . . . . . 20 . 0.974 0.971 0.224
'X-RAY DIFFRACTION' 1.993 2.090 382 . 14 368 100.0000 . 0.173 . . 0.170 . . . . . 0.166 . . . . . 20 . 0.980 0.977 0.245
'X-RAY DIFFRACTION' 2.090 2.203 356 . 17 339 100.0000 . 0.186 . . 0.181 . . . . . 0.176 . . . . . 20 . 0.979 0.969 0.278
'X-RAY DIFFRACTION' 2.203 2.336 354 . 15 335 98.8701 . 0.209 . . 0.206 . . . . . 0.207 . . . . . 20 . 0.976 0.960 0.289
'X-RAY DIFFRACTION' 2.336 2.497 323 . 23 300 100.0000 . 0.193 . . 0.187 . . . . . 0.196 . . . . . 20 . 0.979 0.962 0.274
'X-RAY DIFFRACTION' 2.497 2.696 312 . 16 296 100.0000 . 0.195 . . 0.194 . . . . . 0.205 . . . . . 20 . 0.977 0.971 0.212
'X-RAY DIFFRACTION' 2.696 2.952 290 . 17 273 100.0000 . 0.159 . . 0.155 . . . . . 0.177 . . . . . 20 . 0.985 0.966 0.240
'X-RAY DIFFRACTION' 2.952 3.299 259 . 10 248 99.6139 . 0.131 . . 0.130 . . . . . 0.172 . . . . . 20 . 0.991 0.986 0.155
'X-RAY DIFFRACTION' 3.299 3.805 233 . 9 224 100.0000 . 0.130 . . 0.130 . . . . . 0.167 . . . . . 20 . 0.991 0.993 0.129
'X-RAY DIFFRACTION' 3.805 4.650 204 . 12 192 100.0000 . 0.123 . . 0.120 . . . . . 0.167 . . . . . 20 . 0.992 0.983 0.164
'X-RAY DIFFRACTION' 4.650 6.536 163 . 9 154 100.0000 . 0.148 . . 0.146 . . . . . 0.206 . . . . . 20 . 0.988 0.980 0.186
'X-RAY DIFFRACTION' 6.536 41.521 107 . 6 101 100.0000 . 0.160 . . 0.163 . . . . . 0.254 . . . . . 20 . 0.981 0.995 0.116
#
_struct.entry_id 9OKU
_struct.title '16mer self-complementary duplex RNA with dA:s(2)U pair sequence 1'
_struct.pdbx_model_details ?
_struct.pdbx_formula_weight ?
_struct.pdbx_formula_weight_method ?
_struct.pdbx_model_type_details ?
_struct.pdbx_CASP_flag N
#
_struct_keywords.entry_id 9OKU
_struct_keywords.text 'Deoxyribo-purine, 2-thiouridine, RNA duplex, Origin of Life, RNA'
_struct_keywords.pdbx_keywords RNA
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 3 ?
#
_struct_ref.id 1
_struct_ref.db_name PDB
_struct_ref.db_code 9OKU
_struct_ref.pdbx_db_accession 9OKU
_struct_ref.pdbx_db_isoform ?
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_align_begin 1
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 9OKU
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 16
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession 9OKU
_struct_ref_seq.db_align_beg 1
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 16
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 16
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_and_software_defined_assembly
_pdbx_struct_assembly.method_details PISA
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
loop_
_pdbx_struct_assembly_prop.biol_id
_pdbx_struct_assembly_prop.type
_pdbx_struct_assembly_prop.value
_pdbx_struct_assembly_prop.details
1 'ABSA (A^2)' 2680 ?
1 MORE -12 ?
1 'SSA (A^2)' 5690 ?
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1,2
_pdbx_struct_assembly_gen.asym_id_list A,B,C
#
_pdbx_struct_assembly_auth_evidence.id 1
_pdbx_struct_assembly_auth_evidence.assembly_id 1
_pdbx_struct_assembly_auth_evidence.experimental_support none
_pdbx_struct_assembly_auth_evidence.details ?
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 4_555 y,x,-z -0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 0.5000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
covale1 covale both ? A U 11 "O3'" ? ? ? 1_555 A SUR 12 P ? ? A U 11 A SUR 12 1_555 ? ? ? ? ? ? ? 1.618 ? ?
covale2 covale both ? A SUR 12 "O3'" ? ? ? 1_555 A C 13 P ? ? A SUR 12 A C 13 1_555 ? ? ? ? ? ? ? 1.592 ? ?
metalc1 metalc ? ? A U 16 OP1 ? ? ? 1_555 B MG . MG ? ? A U 16 A MG 101 1_555 ? ? ? ? ? ? ? 1.963 ? ?
metalc2 metalc ? ? B MG . MG ? ? ? 1_555 C HOH . O ? ? A MG 101 A HOH 205 14_654 ? ? ? ? ? ? ? 2.206 ? ?
metalc3 metalc ? ? B MG . MG ? ? ? 1_555 C HOH . O ? ? A MG 101 A HOH 235 1_555 ? ? ? ? ? ? ? 1.959 ? ?
metalc4 metalc ? ? B MG . MG ? ? ? 1_555 C HOH . O ? ? A MG 101 A HOH 271 1_555 ? ? ? ? ? ? ? 2.170 ? ?
metalc5 metalc ? ? B MG . MG ? ? ? 1_555 C HOH . O ? ? A MG 101 A HOH 273 1_555 ? ? ? ? ? ? ? 2.254 ? ?
metalc6 metalc ? ? B MG . MG ? ? ? 1_555 C HOH . O ? ? A MG 101 A HOH 279 1_555 ? ? ? ? ? ? ? 2.412 ? ?
hydrog1 hydrog ? ? A A 1 N1 ? ? ? 1_555 A U 16 N3 ? ? A A 1 A U 16 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog2 hydrog ? ? A A 1 N6 ? ? ? 1_555 A U 16 O4 ? ? A A 1 A U 16 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog3 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 15 N3 ? ? A G 2 A C 15 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog4 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 15 O2 ? ? A G 2 A C 15 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog5 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 15 N4 ? ? A G 2 A C 15 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog6 hydrog ? ? A A 3 N1 ? ? ? 1_555 A U 14 N3 ? ? A A 3 A U 14 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog7 hydrog ? ? A A 3 N6 ? ? ? 1_555 A U 14 O4 ? ? A A 3 A U 14 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog8 hydrog ? ? A G 4 N1 ? ? ? 1_555 A C 13 N3 ? ? A G 4 A C 13 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog9 hydrog ? ? A G 4 N2 ? ? ? 1_555 A C 13 O2 ? ? A G 4 A C 13 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog10 hydrog ? ? A G 4 O6 ? ? ? 1_555 A C 13 N4 ? ? A G 4 A C 13 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog11 hydrog ? ? A DA 5 N1 ? ? ? 1_555 A SUR 12 N3 ? ? A DA 5 A SUR 12 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog12 hydrog ? ? A DA 5 N6 ? ? ? 1_555 A SUR 12 O4 ? ? A DA 5 A SUR 12 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog13 hydrog ? ? A A 6 N1 ? ? ? 1_555 A U 11 N3 ? ? A A 6 A U 11 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog14 hydrog ? ? A A 6 N6 ? ? ? 1_555 A U 11 O4 ? ? A A 6 A U 11 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog15 hydrog ? ? A G 7 N1 ? ? ? 1_555 A C 10 N3 ? ? A G 7 A C 10 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog16 hydrog ? ? A G 7 N2 ? ? ? 1_555 A C 10 O2 ? ? A G 7 A C 10 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog17 hydrog ? ? A G 7 O6 ? ? ? 1_555 A C 10 N4 ? ? A G 7 A C 10 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog18 hydrog ? ? A A 8 N1 ? ? ? 1_555 A U 9 N3 ? ? A A 8 A U 9 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog19 hydrog ? ? A A 8 N6 ? ? ? 1_555 A U 9 O4 ? ? A A 8 A U 9 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog20 hydrog ? ? A U 9 N3 ? ? ? 1_555 A A 8 N1 ? ? A U 9 A A 8 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog21 hydrog ? ? A U 9 O4 ? ? ? 1_555 A A 8 N6 ? ? A U 9 A A 8 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog22 hydrog ? ? A C 10 N3 ? ? ? 1_555 A G 7 N1 ? ? A C 10 A G 7 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog23 hydrog ? ? A C 10 N4 ? ? ? 1_555 A G 7 O6 ? ? A C 10 A G 7 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog24 hydrog ? ? A C 10 O2 ? ? ? 1_555 A G 7 N2 ? ? A C 10 A G 7 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog25 hydrog ? ? A U 11 N3 ? ? ? 1_555 A A 6 N1 ? ? A U 11 A A 6 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog26 hydrog ? ? A U 11 O4 ? ? ? 1_555 A A 6 N6 ? ? A U 11 A A 6 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog27 hydrog ? ? A SUR 12 N3 ? ? ? 1_555 A DA 5 N1 ? ? A SUR 12 A DA 5 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog28 hydrog ? ? A SUR 12 O4 ? ? ? 1_555 A DA 5 N6 ? ? A SUR 12 A DA 5 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog29 hydrog ? ? A C 13 N3 ? ? ? 1_555 A G 4 N1 ? ? A C 13 A G 4 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog30 hydrog ? ? A C 13 N4 ? ? ? 1_555 A G 4 O6 ? ? A C 13 A G 4 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog31 hydrog ? ? A C 13 O2 ? ? ? 1_555 A G 4 N2 ? ? A C 13 A G 4 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog32 hydrog ? ? A U 14 N3 ? ? ? 1_555 A A 3 N1 ? ? A U 14 A A 3 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog33 hydrog ? ? A U 14 O4 ? ? ? 1_555 A A 3 N6 ? ? A U 14 A A 3 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog34 hydrog ? ? A C 15 N3 ? ? ? 1_555 A G 2 N1 ? ? A C 15 A G 2 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog35 hydrog ? ? A C 15 N4 ? ? ? 1_555 A G 2 O6 ? ? A C 15 A G 2 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog36 hydrog ? ? A C 15 O2 ? ? ? 1_555 A G 2 N2 ? ? A C 15 A G 2 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog37 hydrog ? ? A U 16 N3 ? ? ? 1_555 A A 1 N1 ? ? A U 16 A A 1 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog38 hydrog ? ? A U 16 O4 ? ? ? 1_555 A A 1 N6 ? ? A U 16 A A 1 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
covale ? ?
metalc ? ?
hydrog ? ?
#
loop_
_pdbx_struct_conn_angle.id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_alt_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_auth_atom_id
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_alt_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr2_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_atom_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code
_pdbx_struct_conn_angle.ptnr2_symmetry
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_alt_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_atom_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_pdbx_struct_conn_angle.value_esd
1 OP1 ? A U 16 ? A U 16 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? C HOH . ? A HOH 205 ? 14_654 163.3 ?
2 OP1 ? A U 16 ? A U 16 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? C HOH . ? A HOH 235 ? 1_555 88.1 ?
3 O ? C HOH . ? A HOH 205 ? 14_654 MG ? B MG . ? A MG 101 ? 1_555 O ? C HOH . ? A HOH 235 ? 1_555 107.7 ?
4 OP1 ? A U 16 ? A U 16 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? C HOH . ? A HOH 271 ? 1_555 92.6 ?
5 O ? C HOH . ? A HOH 205 ? 14_654 MG ? B MG . ? A MG 101 ? 1_555 O ? C HOH . ? A HOH 271 ? 1_555 89.7 ?
6 O ? C HOH . ? A HOH 235 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? C HOH . ? A HOH 271 ? 1_555 101.0 ?
7 OP1 ? A U 16 ? A U 16 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? C HOH . ? A HOH 273 ? 1_555 90.7 ?
8 O ? C HOH . ? A HOH 205 ? 14_654 MG ? B MG . ? A MG 101 ? 1_555 O ? C HOH . ? A HOH 273 ? 1_555 86.4 ?
9 O ? C HOH . ? A HOH 235 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? C HOH . ? A HOH 273 ? 1_555 81.9 ?
10 O ? C HOH . ? A HOH 271 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? C HOH . ? A HOH 273 ? 1_555 175.6 ?
11 OP1 ? A U 16 ? A U 16 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? C HOH . ? A HOH 279 ? 1_555 88.6 ?
12 O ? C HOH . ? A HOH 205 ? 14_654 MG ? B MG . ? A MG 101 ? 1_555 O ? C HOH . ? A HOH 279 ? 1_555 75.4 ?
13 O ? C HOH . ? A HOH 235 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? C HOH . ? A HOH 279 ? 1_555 175.6 ?
14 O ? C HOH . ? A HOH 271 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? C HOH . ? A HOH 279 ? 1_555 81.9 ?
15 O ? C HOH . ? A HOH 273 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? C HOH . ? A HOH 279 ? 1_555 95.3 ?
#
_pdbx_entry_details.entry_id 9OKU
_pdbx_entry_details.nonpolymer_details ?
_pdbx_entry_details.sequence_details ?
_pdbx_entry_details.compound_details ?
_pdbx_entry_details.source_details ?
_pdbx_entry_details.has_ligand_of_interest Y
_pdbx_entry_details.has_protein_modification N
#
loop_
_pdbx_validate_close_contact.id
_pdbx_validate_close_contact.PDB_model_num
_pdbx_validate_close_contact.auth_atom_id_1
_pdbx_validate_close_contact.auth_asym_id_1
_pdbx_validate_close_contact.auth_comp_id_1
_pdbx_validate_close_contact.auth_seq_id_1
_pdbx_validate_close_contact.PDB_ins_code_1
_pdbx_validate_close_contact.label_alt_id_1
_pdbx_validate_close_contact.auth_atom_id_2
_pdbx_validate_close_contact.auth_asym_id_2
_pdbx_validate_close_contact.auth_comp_id_2
_pdbx_validate_close_contact.auth_seq_id_2
_pdbx_validate_close_contact.PDB_ins_code_2
_pdbx_validate_close_contact.label_alt_id_2
_pdbx_validate_close_contact.dist
1 1 N3 A A 6 ? ? O A HOH 201 ? ? 2.08
2 1 O A HOH 204 ? ? O A HOH 293 ? ? 2.09
3 1 O A HOH 221 ? ? O A HOH 293 ? ? 2.16
4 1 O A HOH 217 ? ? O A HOH 293 ? ? 2.16
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 "O4'" A DA 5 ? ? "C1'" A DA 5 ? ? N9 A DA 5 ? ? 110.16 108.30 1.86 0.30 N
2 1 "O5'" A A 6 ? ? P A A 6 ? ? OP2 A A 6 ? ? 98.42 105.70 -7.28 0.90 N
#
loop_
_pdbx_struct_special_symmetry.id
_pdbx_struct_special_symmetry.PDB_model_num
_pdbx_struct_special_symmetry.auth_asym_id
_pdbx_struct_special_symmetry.auth_comp_id
_pdbx_struct_special_symmetry.auth_seq_id
_pdbx_struct_special_symmetry.PDB_ins_code
_pdbx_struct_special_symmetry.label_asym_id
_pdbx_struct_special_symmetry.label_comp_id
_pdbx_struct_special_symmetry.label_seq_id
1 1 A HOH 218 ? C HOH .
2 1 A HOH 250 ? C HOH .
3 1 A HOH 268 ? C HOH .
4 1 A HOH 276 ? C HOH .
5 1 A HOH 286 ? C HOH .
6 1 A HOH 288 ? C HOH .
7 1 A HOH 292 ? C HOH .
8 1 A HOH 301 ? C HOH .
#
_pdbx_distant_solvent_atoms.id 1
_pdbx_distant_solvent_atoms.PDB_model_num 1
_pdbx_distant_solvent_atoms.auth_atom_id O
_pdbx_distant_solvent_atoms.label_alt_id ?
_pdbx_distant_solvent_atoms.auth_asym_id A
_pdbx_distant_solvent_atoms.auth_comp_id HOH
_pdbx_distant_solvent_atoms.auth_seq_id 301
_pdbx_distant_solvent_atoms.PDB_ins_code ?
_pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.04
_pdbx_distant_solvent_atoms.neighbor_ligand_distance .
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
A OP3 O N N 1
A P P N N 2
A OP1 O N N 3
A OP2 O N N 4
A "O5'" O N N 5
A "C5'" C N N 6
A "C4'" C N R 7
A "O4'" O N N 8
A "C3'" C N S 9
A "O3'" O N N 10
A "C2'" C N R 11
A "O2'" O N N 12
A "C1'" C N R 13
A N9 N Y N 14
A C8 C Y N 15
A N7 N Y N 16
A C5 C Y N 17
A C6 C Y N 18
A N6 N N N 19
A N1 N Y N 20
A C2 C Y N 21
A N3 N Y N 22
A C4 C Y N 23
A HOP3 H N N 24
A HOP2 H N N 25
A "H5'" H N N 26
A "H5''" H N N 27
A "H4'" H N N 28
A "H3'" H N N 29
A "HO3'" H N N 30
A "H2'" H N N 31
A "HO2'" H N N 32
A "H1'" H N N 33
A H8 H N N 34
A H61 H N N 35
A H62 H N N 36
A H2 H N N 37
C OP3 O N N 38
C P P N N 39
C OP1 O N N 40
C OP2 O N N 41
C "O5'" O N N 42
C "C5'" C N N 43
C "C4'" C N R 44
C "O4'" O N N 45
C "C3'" C N S 46
C "O3'" O N N 47
C "C2'" C N R 48
C "O2'" O N N 49
C "C1'" C N R 50
C N1 N N N 51
C C2 C N N 52
C O2 O N N 53
C N3 N N N 54
C C4 C N N 55
C N4 N N N 56
C C5 C N N 57
C C6 C N N 58
C HOP3 H N N 59
C HOP2 H N N 60
C "H5'" H N N 61
C "H5''" H N N 62
C "H4'" H N N 63
C "H3'" H N N 64
C "HO3'" H N N 65
C "H2'" H N N 66
C "HO2'" H N N 67
C "H1'" H N N 68
C H41 H N N 69
C H42 H N N 70
C H5 H N N 71
C H6 H N N 72
DA OP3 O N N 73
DA P P N N 74
DA OP1 O N N 75
DA OP2 O N N 76
DA "O5'" O N N 77
DA "C5'" C N N 78
DA "C4'" C N R 79
DA "O4'" O N N 80
DA "C3'" C N S 81
DA "O3'" O N N 82
DA "C2'" C N N 83
DA "C1'" C N R 84
DA N9 N Y N 85
DA C8 C Y N 86
DA N7 N Y N 87
DA C5 C Y N 88
DA C6 C Y N 89
DA N6 N N N 90
DA N1 N Y N 91
DA C2 C Y N 92
DA N3 N Y N 93
DA C4 C Y N 94
DA HOP3 H N N 95
DA HOP2 H N N 96
DA "H5'" H N N 97
DA "H5''" H N N 98
DA "H4'" H N N 99
DA "H3'" H N N 100
DA "HO3'" H N N 101
DA "H2'" H N N 102
DA "H2''" H N N 103
DA "H1'" H N N 104
DA H8 H N N 105
DA H61 H N N 106
DA H62 H N N 107
DA H2 H N N 108
G OP3 O N N 109
G P P N N 110
G OP1 O N N 111
G OP2 O N N 112
G "O5'" O N N 113
G "C5'" C N N 114
G "C4'" C N R 115
G "O4'" O N N 116
G "C3'" C N S 117
G "O3'" O N N 118
G "C2'" C N R 119
G "O2'" O N N 120
G "C1'" C N R 121
G N9 N Y N 122
G C8 C Y N 123
G N7 N Y N 124
G C5 C Y N 125
G C6 C N N 126
G O6 O N N 127
G N1 N N N 128
G C2 C N N 129
G N2 N N N 130
G N3 N N N 131
G C4 C Y N 132
G HOP3 H N N 133
G HOP2 H N N 134
G "H5'" H N N 135
G "H5''" H N N 136
G "H4'" H N N 137
G "H3'" H N N 138
G "HO3'" H N N 139
G "H2'" H N N 140
G "HO2'" H N N 141
G "H1'" H N N 142
G H8 H N N 143
G H1 H N N 144
G H21 H N N 145
G H22 H N N 146
HOH O O N N 147
HOH H1 H N N 148
HOH H2 H N N 149
MG MG MG N N 150
SUR P P N N 151
SUR OP1 O N N 152
SUR OP2 O N N 153
SUR OP3 O N N 154
SUR "O5'" O N N 155
SUR "C5'" C N N 156
SUR "C4'" C N R 157
SUR "O4'" O N N 158
SUR "C3'" C N S 159
SUR "C1'" C N R 160
SUR N1 N N N 161
SUR "C2'" C N R 162
SUR C6 C N N 163
SUR C2 C N N 164
SUR C5 C N N 165
SUR S2 S N N 166
SUR N3 N N N 167
SUR C4 C N N 168
SUR O4 O N N 169
SUR "O2'" O N N 170
SUR "O3'" O N N 171
SUR HOP1 H N N 172
SUR HOP3 H N N 173
SUR "H5'1" H N N 174
SUR "H5'2" H N N 175
SUR "H4'" H N N 176
SUR "H3'" H N N 177
SUR "H1'" H N N 178
SUR "H2'" H N N 179
SUR HC6 H N N 180
SUR HC5 H N N 181
SUR HN3 H N N 182
SUR HO2 H N N 183
SUR HO3 H N N 184
U OP3 O N N 185
U P P N N 186
U OP1 O N N 187
U OP2 O N N 188
U "O5'" O N N 189
U "C5'" C N N 190
U "C4'" C N R 191
U "O4'" O N N 192
U "C3'" C N S 193
U "O3'" O N N 194
U "C2'" C N R 195
U "O2'" O N N 196
U "C1'" C N R 197
U N1 N N N 198
U C2 C N N 199
U O2 O N N 200
U N3 N N N 201
U C4 C N N 202
U O4 O N N 203
U C5 C N N 204
U C6 C N N 205
U HOP3 H N N 206
U HOP2 H N N 207
U "H5'" H N N 208
U "H5''" H N N 209
U "H4'" H N N 210
U "H3'" H N N 211
U "HO3'" H N N 212
U "H2'" H N N 213
U "HO2'" H N N 214
U "H1'" H N N 215
U H3 H N N 216
U H5 H N N 217
U H6 H N N 218
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
A OP3 P sing N N 1
A OP3 HOP3 sing N N 2
A P OP1 doub N N 3
A P OP2 sing N N 4
A P "O5'" sing N N 5
A OP2 HOP2 sing N N 6
A "O5'" "C5'" sing N N 7
A "C5'" "C4'" sing N N 8
A "C5'" "H5'" sing N N 9
A "C5'" "H5''" sing N N 10
A "C4'" "O4'" sing N N 11
A "C4'" "C3'" sing N N 12
A "C4'" "H4'" sing N N 13
A "O4'" "C1'" sing N N 14
A "C3'" "O3'" sing N N 15
A "C3'" "C2'" sing N N 16
A "C3'" "H3'" sing N N 17
A "O3'" "HO3'" sing N N 18
A "C2'" "O2'" sing N N 19
A "C2'" "C1'" sing N N 20
A "C2'" "H2'" sing N N 21
A "O2'" "HO2'" sing N N 22
A "C1'" N9 sing N N 23
A "C1'" "H1'" sing N N 24
A N9 C8 sing Y N 25
A N9 C4 sing Y N 26
A C8 N7 doub Y N 27
A C8 H8 sing N N 28
A N7 C5 sing Y N 29
A C5 C6 sing Y N 30
A C5 C4 doub Y N 31
A C6 N6 sing N N 32
A C6 N1 doub Y N 33
A N6 H61 sing N N 34
A N6 H62 sing N N 35
A N1 C2 sing Y N 36
A C2 N3 doub Y N 37
A C2 H2 sing N N 38
A N3 C4 sing Y N 39
C OP3 P sing N N 40
C OP3 HOP3 sing N N 41
C P OP1 doub N N 42
C P OP2 sing N N 43
C P "O5'" sing N N 44
C OP2 HOP2 sing N N 45
C "O5'" "C5'" sing N N 46
C "C5'" "C4'" sing N N 47
C "C5'" "H5'" sing N N 48
C "C5'" "H5''" sing N N 49
C "C4'" "O4'" sing N N 50
C "C4'" "C3'" sing N N 51
C "C4'" "H4'" sing N N 52
C "O4'" "C1'" sing N N 53
C "C3'" "O3'" sing N N 54
C "C3'" "C2'" sing N N 55
C "C3'" "H3'" sing N N 56
C "O3'" "HO3'" sing N N 57
C "C2'" "O2'" sing N N 58
C "C2'" "C1'" sing N N 59
C "C2'" "H2'" sing N N 60
C "O2'" "HO2'" sing N N 61
C "C1'" N1 sing N N 62
C "C1'" "H1'" sing N N 63
C N1 C2 sing N N 64
C N1 C6 sing N N 65
C C2 O2 doub N N 66
C C2 N3 sing N N 67
C N3 C4 doub N N 68
C C4 N4 sing N N 69
C C4 C5 sing N N 70
C N4 H41 sing N N 71
C N4 H42 sing N N 72
C C5 C6 doub N N 73
C C5 H5 sing N N 74
C C6 H6 sing N N 75
DA OP3 P sing N N 76
DA OP3 HOP3 sing N N 77
DA P OP1 doub N N 78
DA P OP2 sing N N 79
DA P "O5'" sing N N 80
DA OP2 HOP2 sing N N 81
DA "O5'" "C5'" sing N N 82
DA "C5'" "C4'" sing N N 83
DA "C5'" "H5'" sing N N 84
DA "C5'" "H5''" sing N N 85
DA "C4'" "O4'" sing N N 86
DA "C4'" "C3'" sing N N 87
DA "C4'" "H4'" sing N N 88
DA "O4'" "C1'" sing N N 89
DA "C3'" "O3'" sing N N 90
DA "C3'" "C2'" sing N N 91
DA "C3'" "H3'" sing N N 92
DA "O3'" "HO3'" sing N N 93
DA "C2'" "C1'" sing N N 94
DA "C2'" "H2'" sing N N 95
DA "C2'" "H2''" sing N N 96
DA "C1'" N9 sing N N 97
DA "C1'" "H1'" sing N N 98
DA N9 C8 sing Y N 99
DA N9 C4 sing Y N 100
DA C8 N7 doub Y N 101
DA C8 H8 sing N N 102
DA N7 C5 sing Y N 103
DA C5 C6 sing Y N 104
DA C5 C4 doub Y N 105
DA C6 N6 sing N N 106
DA C6 N1 doub Y N 107
DA N6 H61 sing N N 108
DA N6 H62 sing N N 109
DA N1 C2 sing Y N 110
DA C2 N3 doub Y N 111
DA C2 H2 sing N N 112
DA N3 C4 sing Y N 113
G OP3 P sing N N 114
G OP3 HOP3 sing N N 115
G P OP1 doub N N 116
G P OP2 sing N N 117
G P "O5'" sing N N 118
G OP2 HOP2 sing N N 119
G "O5'" "C5'" sing N N 120
G "C5'" "C4'" sing N N 121
G "C5'" "H5'" sing N N 122
G "C5'" "H5''" sing N N 123
G "C4'" "O4'" sing N N 124
G "C4'" "C3'" sing N N 125
G "C4'" "H4'" sing N N 126
G "O4'" "C1'" sing N N 127
G "C3'" "O3'" sing N N 128
G "C3'" "C2'" sing N N 129
G "C3'" "H3'" sing N N 130
G "O3'" "HO3'" sing N N 131
G "C2'" "O2'" sing N N 132
G "C2'" "C1'" sing N N 133
G "C2'" "H2'" sing N N 134
G "O2'" "HO2'" sing N N 135
G "C1'" N9 sing N N 136
G "C1'" "H1'" sing N N 137
G N9 C8 sing Y N 138
G N9 C4 sing Y N 139
G C8 N7 doub Y N 140
G C8 H8 sing N N 141
G N7 C5 sing Y N 142
G C5 C6 sing N N 143
G C5 C4 doub Y N 144
G C6 O6 doub N N 145
G C6 N1 sing N N 146
G N1 C2 sing N N 147
G N1 H1 sing N N 148
G C2 N2 sing N N 149
G C2 N3 doub N N 150
G N2 H21 sing N N 151
G N2 H22 sing N N 152
G N3 C4 sing N N 153
HOH O H1 sing N N 154
HOH O H2 sing N N 155
SUR P OP1 sing N N 156
SUR P OP2 doub N N 157
SUR P OP3 sing N N 158
SUR P "O5'" sing N N 159
SUR OP1 HOP1 sing N N 160
SUR OP3 HOP3 sing N N 161
SUR "O5'" "C5'" sing N N 162
SUR "C5'" "C4'" sing N N 163
SUR "C5'" "H5'1" sing N N 164
SUR "C5'" "H5'2" sing N N 165
SUR "C4'" "O4'" sing N N 166
SUR "C4'" "C3'" sing N N 167
SUR "C4'" "H4'" sing N N 168
SUR "O4'" "C1'" sing N N 169
SUR "C3'" "C2'" sing N N 170
SUR "C3'" "O3'" sing N N 171
SUR "C3'" "H3'" sing N N 172
SUR "C1'" N1 sing N N 173
SUR "C1'" "C2'" sing N N 174
SUR "C1'" "H1'" sing N N 175
SUR N1 C6 sing N N 176
SUR N1 C2 sing N N 177
SUR "C2'" "O2'" sing N N 178
SUR "C2'" "H2'" sing N N 179
SUR C6 C5 doub N N 180
SUR C6 HC6 sing N N 181
SUR C2 S2 doub N N 182
SUR C2 N3 sing N N 183
SUR C5 C4 sing N N 184
SUR C5 HC5 sing N N 185
SUR N3 C4 sing N N 186
SUR N3 HN3 sing N N 187
SUR C4 O4 doub N N 188
SUR "O2'" HO2 sing N N 189
SUR "O3'" HO3 sing N N 190
U OP3 P sing N N 191
U OP3 HOP3 sing N N 192
U P OP1 doub N N 193
U P OP2 sing N N 194
U P "O5'" sing N N 195
U OP2 HOP2 sing N N 196
U "O5'" "C5'" sing N N 197
U "C5'" "C4'" sing N N 198
U "C5'" "H5'" sing N N 199
U "C5'" "H5''" sing N N 200
U "C4'" "O4'" sing N N 201
U "C4'" "C3'" sing N N 202
U "C4'" "H4'" sing N N 203
U "O4'" "C1'" sing N N 204
U "C3'" "O3'" sing N N 205
U "C3'" "C2'" sing N N 206
U "C3'" "H3'" sing N N 207
U "O3'" "HO3'" sing N N 208
U "C2'" "O2'" sing N N 209
U "C2'" "C1'" sing N N 210
U "C2'" "H2'" sing N N 211
U "O2'" "HO2'" sing N N 212
U "C1'" N1 sing N N 213
U "C1'" "H1'" sing N N 214
U N1 C2 sing N N 215
U N1 C6 sing N N 216
U C2 O2 doub N N 217
U C2 N3 sing N N 218
U N3 C4 sing N N 219
U N3 H3 sing N N 220
U C4 O4 doub N N 221
U C4 C5 sing N N 222
U C5 C6 doub N N 223
U C5 H5 sing N N 224
U C6 H6 sing N N 225
#
loop_
_ndb_struct_conf_na.entry_id
_ndb_struct_conf_na.feature
9OKU 'a-form double helix'
9OKU 'mismatched base pair'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A A 1 1_555 A U 16 4_555 -0.034 -0.135 0.036 0.126 -9.033 0.757 1 A_A1:U16_A A 1 ? A 16 ? 20 1
1 A G 2 1_555 A C 15 4_555 -0.208 -0.206 -0.109 -4.293 -15.798 -1.849 2 A_G2:C15_A A 2 ? A 15 ? 19 1
1 A A 3 1_555 A U 14 4_555 0.089 -0.141 0.051 -3.046 -12.490 1.845 3 A_A3:U14_A A 3 ? A 14 ? 20 1
1 A G 4 1_555 A C 13 4_555 -0.354 -0.166 -0.102 -2.341 -11.386 -1.425 4 A_G4:C13_A A 4 ? A 13 ? 19 1
1 A DA 5 1_555 A SUR 12 4_555 0.131 -0.161 -0.033 -1.111 -8.735 -1.306 5 A_DA5:SUR12_A A 5 ? A 12 ? 20 1
1 A A 6 1_555 A U 11 4_555 0.006 -0.075 -0.050 -8.522 -13.762 3.646 6 A_A6:U11_A A 6 ? A 11 ? 20 1
1 A G 7 1_555 A C 10 4_555 -0.184 -0.063 0.032 -3.780 -8.414 0.864 7 A_G7:C10_A A 7 ? A 10 ? 19 1
1 A A 8 1_555 A U 9 4_555 0.006 -0.191 -0.076 -1.742 -12.526 0.385 8 A_A8:U9_A A 8 ? A 9 ? 20 1
1 A U 9 1_555 A A 8 4_555 -0.006 -0.191 -0.076 1.742 -12.526 0.385 9 A_U9:A8_A A 9 ? A 8 ? 20 1
1 A C 10 1_555 A G 7 4_555 0.184 -0.063 0.032 3.780 -8.414 0.864 10 A_C10:G7_A A 10 ? A 7 ? 19 1
1 A U 11 1_555 A A 6 4_555 -0.006 -0.075 -0.050 8.522 -13.762 3.646 11 A_U11:A6_A A 11 ? A 6 ? 20 1
1 A SUR 12 1_555 A DA 5 4_555 -0.131 -0.161 -0.033 1.111 -8.735 -1.306 12 A_SUR12:DA5_A A 12 ? A 5 ? 20 1
1 A C 13 1_555 A G 4 4_555 0.354 -0.166 -0.102 2.341 -11.386 -1.425 13 A_C13:G4_A A 13 ? A 4 ? 19 1
1 A U 14 1_555 A A 3 4_555 -0.089 -0.141 0.051 3.046 -12.490 1.845 14 A_U14:A3_A A 14 ? A 3 ? 20 1
1 A C 15 1_555 A G 2 4_555 0.208 -0.206 -0.109 4.293 -15.798 -1.849 15 A_C15:G2_A A 15 ? A 2 ? 19 1
1 A U 16 1_555 A A 1 4_555 0.034 -0.135 0.036 -0.126 -9.033 0.757 16 A_U16:A1_A A 16 ? A 1 ? 20 1
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A A 1 1_555 A U 16 4_555 A G 2 1_555 A C 15 4_555 -0.635 -1.147 3.285 -0.636 8.130 34.030 -3.096 0.964 2.952 13.650
1.068 34.965 1 AA_A1G2:C15U16_AA A 1 ? A 16 ? A 2 ? A 15 ?
1 A G 2 1_555 A C 15 4_555 A A 3 1_555 A U 14 4_555 0.690 -1.213 3.156 -0.047 4.676 33.705 -2.775 -1.186 2.965 8.016
0.081 34.018 2 AA_G2A3:U14C15_AA A 2 ? A 15 ? A 3 ? A 14 ?
1 A A 3 1_555 A U 14 4_555 A G 4 1_555 A C 13 4_555 -0.469 -1.422 3.181 -0.829 10.868 32.062 -4.037 0.685 2.587 19.003
1.450 33.818 3 AA_A3G4:C13U14_AA A 3 ? A 14 ? A 4 ? A 13 ?
1 A G 4 1_555 A C 13 4_555 A DA 5 1_555 A SUR 12 4_555 0.298 -1.492 3.261 -0.529 9.293 29.874 -4.405 -0.647 2.681 17.500
0.996 31.259 4 AA_G4DA5:SUR12C13_AA A 4 ? A 13 ? A 5 ? A 12 ?
1 A DA 5 1_555 A SUR 12 4_555 A A 6 1_555 A U 11 4_555 1.026 -2.038 3.351 3.565 15.255 32.355 -5.301 -1.200 2.289 25.589
-5.979 35.857 5 AA_DA5A6:U11SUR12_AA A 5 ? A 12 ? A 6 ? A 11 ?
1 A A 6 1_555 A U 11 4_555 A G 7 1_555 A C 10 4_555 -0.229 -1.983 3.045 -0.127 8.429 26.454 -5.843 0.451 2.316 17.851
0.270 27.741 6 AA_A6G7:C10U11_AA A 6 ? A 11 ? A 7 ? A 10 ?
1 A G 7 1_555 A C 10 4_555 A A 8 1_555 A U 9 4_555 -0.458 -1.525 3.203 0.790 5.295 32.908 -3.489 0.922 2.918 9.271
-1.384 33.329 7 AA_G7A8:U9C10_AA A 7 ? A 10 ? A 8 ? A 9 ?
1 A A 8 1_555 A U 9 4_555 A U 9 1_555 A A 8 4_555 0.000 -1.088 3.142 0.000 8.451 30.709 -3.401 0.000 2.753 15.589
0.000 31.824 8 AA_A8U9:A8U9_AA A 8 ? A 9 ? A 9 ? A 8 ?
1 A U 9 1_555 A A 8 4_555 A C 10 1_555 A G 7 4_555 0.458 -1.525 3.203 -0.790 5.295 32.908 -3.489 -0.922 2.918 9.271
1.384 33.329 9 AA_U9C10:G7A8_AA A 9 ? A 8 ? A 10 ? A 7 ?
1 A C 10 1_555 A G 7 4_555 A U 11 1_555 A A 6 4_555 0.229 -1.983 3.045 0.127 8.429 26.454 -5.843 -0.451 2.316 17.851
-0.270 27.741 10 AA_C10U11:A6G7_AA A 10 ? A 7 ? A 11 ? A 6 ?
1 A U 11 1_555 A A 6 4_555 A SUR 12 1_555 A DA 5 4_555 -1.026 -2.038 3.351 -3.565 15.255 32.355 -5.301 1.200 2.289 25.589
5.979 35.857 11 AA_U11SUR12:DA5A6_AA A 11 ? A 6 ? A 12 ? A 5 ?
1 A SUR 12 1_555 A DA 5 4_555 A C 13 1_555 A G 4 4_555 -0.298 -1.492 3.261 0.529 9.293 29.874 -4.405 0.647 2.681 17.500
-0.996 31.259 12 AA_SUR12C13:G4DA5_AA A 12 ? A 5 ? A 13 ? A 4 ?
1 A C 13 1_555 A G 4 4_555 A U 14 1_555 A A 3 4_555 0.469 -1.422 3.181 0.829 10.868 32.062 -4.037 -0.685 2.587 19.003
-1.450 33.818 13 AA_C13U14:A3G4_AA A 13 ? A 4 ? A 14 ? A 3 ?
1 A U 14 1_555 A A 3 4_555 A C 15 1_555 A G 2 4_555 -0.690 -1.213 3.156 0.047 4.676 33.705 -2.775 1.186 2.965 8.016
-0.081 34.018 14 AA_U14C15:G2A3_AA A 14 ? A 3 ? A 15 ? A 2 ?
1 A C 15 1_555 A G 2 4_555 A U 16 1_555 A A 1 4_555 0.635 -1.147 3.285 0.636 8.130 34.030 -3.096 -0.964 2.952 13.650
-1.068 34.965 15 AA_C15U16:A1G2_AA A 15 ? A 2 ? A 16 ? A 1 ?
#
loop_
_pdbx_audit_support.funding_organization
_pdbx_audit_support.country
_pdbx_audit_support.grant_number
_pdbx_audit_support.ordinal
'National Science Foundation (NSF, United States)' 'United States' 2104708 1
'Howard Hughes Medical Institute (HHMI)' 'United States' ? 2
#
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'experimental model'
_pdbx_initial_refinement_model.source_name PDB
_pdbx_initial_refinement_model.accession_code 9MDX
_pdbx_initial_refinement_model.details ?
#
_atom_sites.entry_id 9OKU
_atom_sites.Cartn_transf_matrix[1][1] ?
_atom_sites.Cartn_transf_matrix[1][2] ?
_atom_sites.Cartn_transf_matrix[1][3] ?
_atom_sites.Cartn_transf_matrix[2][1] ?
_atom_sites.Cartn_transf_matrix[2][2] ?
_atom_sites.Cartn_transf_matrix[2][3] ?
_atom_sites.Cartn_transf_matrix[3][1] ?
_atom_sites.Cartn_transf_matrix[3][2] ?
_atom_sites.Cartn_transf_matrix[3][3] ?
_atom_sites.Cartn_transf_vector[1] ?
_atom_sites.Cartn_transf_vector[2] ?
_atom_sites.Cartn_transf_vector[3] ?
_atom_sites.Cartn_transform_axes ?
_atom_sites.fract_transf_matrix[1][1] 0.024291
_atom_sites.fract_transf_matrix[1][2] 0.014025
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.028049
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.008028
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
_atom_sites.solution_primary ?
_atom_sites.solution_secondary ?
_atom_sites.solution_hydrogens ?
_atom_sites.special_details ?
#
loop_
_atom_type.symbol
_atom_type.pdbx_scat_Z
_atom_type.pdbx_N_electrons
_atom_type.scat_Cromer_Mann_a1
_atom_type.scat_Cromer_Mann_b1
_atom_type.scat_Cromer_Mann_a2
_atom_type.scat_Cromer_Mann_b2
_atom_type.scat_Cromer_Mann_a3
_atom_type.scat_Cromer_Mann_b3
_atom_type.scat_Cromer_Mann_a4
_atom_type.scat_Cromer_Mann_b4
_atom_type.scat_Cromer_Mann_c
C 6 6 2.3103 20.8439 1.0201 10.2075 1.5888 0.5687 0.8651 51.6512 0.2156
H 1 1 0.4930 10.5109 0.3229 26.1257 0.1402 3.1424 0.0408 57.7997 0.0030
MG 12 12 5.4265 2.8275 2.1759 79.2611 1.2283 0.3808 2.3099 7.1937 0.8594
N 7 7 12.2220 0.0057 3.1346 9.8933 2.0141 28.9975 1.1672 0.5826 -11.5379
O 8 8 3.0487 13.2771 2.2870 5.7011 1.5464 0.3239 0.8671 32.9089 0.2508
P 15 15 6.4348 1.9067 4.1793 27.1570 1.7801 0.5260 1.4909 68.1645 1.1150
S 16 16 6.9054 1.4679 5.2035 22.2151 1.4379 0.2536 1.5863 56.1720 0.8669
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
_atom_site.calc_flag
ATOM 1 O "O5'" . A A 1 1 ? 1.097 12.828 15.927 1.000 18.745 0 1 A A "O5'" 1 ?
ATOM 2 C "C5'" . A A 1 1 ? -0.171 13.485 15.792 1.000 14.940 0 1 A A "C5'" 1 ?
ATOM 3 C "C4'" . A A 1 1 ? -0.145 14.879 16.363 1.000 12.419 0 1 A A "C4'" 1 ?
ATOM 4 O "O4'" . A A 1 1 ? 0.364 14.860 17.721 1.000 10.437 0 1 A A "O4'" 1 ?
ATOM 5 C "C3'" . A A 1 1 ? 0.789 15.857 15.682 1.000 11.717 0 1 A A "C3'" 1 ?
ATOM 6 O "O3'" . A A 1 1 ? 0.082 16.395 14.599 1.000 12.676 0 1 A A "O3'" 1 ?
ATOM 7 C "C2'" . A A 1 1 ? 0.966 16.904 16.768 1.000 10.940 0 1 A A "C2'" 1 ?
ATOM 8 O "O2'" . A A 1 1 ? -0.187 17.676 16.978 1.000 10.580 0 1 A A "O2'" 1 ?
ATOM 9 C "C1'" . A A 1 1 ? 1.188 15.990 17.955 1.000 9.946 0 1 A A "C1'" 1 ?
ATOM 10 N N9 . A A 1 1 ? 2.556 15.534 18.170 1.000 8.902 0 1 A A N9 1 ?
ATOM 11 C C8 . A A 1 1 ? 3.039 14.246 18.060 1.000 8.937 0 1 A A C8 1 ?
ATOM 12 N N7 . A A 1 1 ? 4.281 14.106 18.436 1.000 9.640 0 1 A A N7 1 ?
ATOM 13 C C5 . A A 1 1 ? 4.640 15.387 18.857 1.000 7.825 0 1 A A C5 1 ?
ATOM 14 C C6 . A A 1 1 ? 5.822 15.894 19.445 1.000 7.722 0 1 A A C6 1 ?
ATOM 15 N N6 . A A 1 1 ? 6.899 15.177 19.684 1.000 8.804 0 1 A A N6 1 ?
ATOM 16 N N1 . A A 1 1 ? 5.873 17.213 19.722 1.000 8.007 0 1 A A N1 1 ?
ATOM 17 C C2 . A A 1 1 ? 4.773 17.944 19.489 1.000 7.536 0 1 A A C2 1 ?
ATOM 18 N N3 . A A 1 1 ? 3.604 17.583 18.976 1.000 7.904 0 1 A A N3 1 ?
ATOM 19 C C4 . A A 1 1 ? 3.583 16.267 18.705 1.000 7.958 0 1 A A C4 1 ?
ATOM 20 P P . G A 1 2 ? 0.837 16.797 13.252 1.000 12.745 0 2 G A P 1 ?
ATOM 21 O OP1 . G A 1 2 ? -0.195 17.104 12.229 1.000 16.076 0 2 G A OP1 1 ?
ATOM 22 O OP2 . G A 1 2 ? 1.905 15.828 12.982 1.000 13.185 0 2 G A OP2 1 ?
ATOM 23 O "O5'" . G A 1 2 ? 1.529 18.168 13.609 1.000 12.072 0 2 G A "O5'" 1 ?
ATOM 24 C "C5'" . G A 1 2 ? 0.803 19.331 13.896 1.000 11.602 0 2 G A "C5'" 1 ?
ATOM 25 C "C4'" . G A 1 2 ? 1.771 20.399 14.353 1.000 11.356 0 2 G A "C4'" 1 ?
ATOM 26 O "O4'" . G A 1 2 ? 2.250 20.067 15.682 1.000 11.281 0 2 G A "O4'" 1 ?
ATOM 27 C "C3'" . G A 1 2 ? 3.051 20.567 13.549 1.000 10.680 0 2 G A "C3'" 1 ?
ATOM 28 O "O3'" . G A 1 2 ? 2.782 21.331 12.396 1.000 11.720 0 2 G A "O3'" 1 ?
ATOM 29 C "C2'" . G A 1 2 ? 3.879 21.357 14.550 1.000 10.008 0 2 G A "C2'" 1 ?
ATOM 30 O "O2'" . G A 1 2 ? 3.497 22.692 14.739 1.000 11.378 0 2 G A "O2'" 1 ?
ATOM 31 C "C1'" . G A 1 2 ? 3.586 20.532 15.800 1.000 9.478 0 2 G A "C1'" 1 ?
ATOM 32 N N9 . G A 1 2 ? 4.465 19.391 15.895 1.000 9.601 0 2 G A N9 1 ?
ATOM 33 C C8 . G A 1 2 ? 4.189 18.073 15.585 1.000 9.049 0 2 G A C8 1 ?
ATOM 34 N N7 . G A 1 2 ? 5.181 17.247 15.820 1.000 8.854 0 2 G A N7 1 ?
ATOM 35 C C5 . G A 1 2 ? 6.151 18.073 16.378 1.000 8.108 0 2 G A C5 1 ?
ATOM 36 C C6 . G A 1 2 ? 7.434 17.727 16.863 1.000 7.488 0 2 G A C6 1 ?
ATOM 37 O O6 . G A 1 2 ? 7.953 16.609 16.927 1.000 7.762 0 2 G A O6 1 ?
ATOM 38 N N1 . G A 1 2 ? 8.147 18.861 17.272 1.000 8.023 0 2 G A N1 1 ?
ATOM 39 C C2 . G A 1 2 ? 7.638 20.136 17.273 1.000 8.281 0 2 G A C2 1 ?
ATOM 40 N N2 . G A 1 2 ? 8.491 21.101 17.663 1.000 8.782 0 2 G A N2 1 ?
ATOM 41 N N3 . G A 1 2 ? 6.412 20.467 16.834 1.000 8.014 0 2 G A N3 1 ?
ATOM 42 C C4 . G A 1 2 ? 5.739 19.382 16.398 1.000 8.039 0 2 G A C4 1 ?
ATOM 43 P P . A A 1 3 ? 3.646 21.122 11.073 1.000 12.890 0 3 A A P 1 ?
ATOM 44 O OP1 . A A 1 3 ? 3.123 22.066 10.034 1.000 15.798 0 3 A A OP1 1 ?
ATOM 45 O OP2 . A A 1 3 ? 3.894 19.716 10.724 1.000 13.796 0 3 A A OP2 1 ?
ATOM 46 O "O5'" . A A 1 3 ? 5.084 21.672 11.532 1.000 11.503 0 3 A A "O5'" 1 ?
ATOM 47 C "C5'" . A A 1 3 ? 5.284 23.060 11.875 1.000 11.081 0 3 A A "C5'" 1 ?
ATOM 48 C "C4'" . A A 1 3 ? 6.670 23.204 12.448 1.000 10.290 0 3 A A "C4'" 1 ?
ATOM 49 O "O4'" . A A 1 3 ? 6.773 22.410 13.650 1.000 9.171 0 3 A A "O4'" 1 ?
ATOM 50 C "C3'" . A A 1 3 ? 7.823 22.707 11.597 1.000 10.198 0 3 A A "C3'" 1 ?
ATOM 51 O "O3'" . A A 1 3 ? 8.118 23.664 10.588 1.000 11.566 0 3 A A "O3'" 1 ?
ATOM 52 C "C2'" . A A 1 3 ? 8.910 22.602 12.666 1.000 9.094 0 3 A A "C2'" 1 ?
ATOM 53 O "O2'" . A A 1 3 ? 9.369 23.866 13.052 1.000 10.502 0 3 A A "O2'" 1 ?
ATOM 54 C "C1'" . A A 1 3 ? 8.111 21.943 13.792 1.000 8.552 0 3 A A "C1'" 1 ?
ATOM 55 N N9 . A A 1 3 ? 8.119 20.491 13.739 1.000 8.545 0 3 A A N9 1 ?
ATOM 56 C C8 . A A 1 3 ? 7.165 19.640 13.231 1.000 8.101 0 3 A A C8 1 ?
ATOM 57 N N7 . A A 1 3 ? 7.482 18.367 13.332 1.000 8.112 0 3 A A N7 1 ?
ATOM 58 C C5 . A A 1 3 ? 8.733 18.389 13.933 1.000 7.431 0 3 A A C5 1 ?
ATOM 59 C C6 . A A 1 3 ? 9.617 17.360 14.313 1.000 7.653 0 3 A A C6 1 ?
ATOM 60 N N6 . A A 1 3 ? 9.349 16.063 14.198 1.000 8.732 0 3 A A N6 1 ?
ATOM 61 N N1 . A A 1 3 ? 10.793 17.723 14.877 1.000 7.888 0 3 A A N1 1 ?
ATOM 62 C C2 . A A 1 3 ? 11.074 19.026 15.014 1.000 7.488 0 3 A A C2 1 ?
ATOM 63 N N3 . A A 1 3 ? 10.310 20.082 14.714 1.000 7.178 0 3 A A N3 1 ?
ATOM 64 C C4 . A A 1 3 ? 9.155 19.684 14.147 1.000 7.616 0 3 A A C4 1 ?
ATOM 65 P P . G A 1 4 ? 8.879 23.202 9.275 1.000 14.442 0 4 G A P 1 ?
ATOM 66 O OP1 . G A 1 4 ? 8.783 24.411 8.375 1.000 16.527 0 4 G A OP1 1 ?
ATOM 67 O OP2 . G A 1 4 ? 8.353 21.919 8.767 1.000 15.516 0 4 G A OP2 1 ?
ATOM 68 O "O5'" . G A 1 4 ? 10.375 22.976 9.778 1.000 12.351 0 4 G A "O5'" 1 ?
ATOM 69 C "C5'" . G A 1 4 ? 11.233 24.059 10.147 1.000 12.777 0 4 G A "C5'" 1 ?
ATOM 70 C "C4'" . G A 1 4 ? 12.551 23.497 10.610 1.000 12.116 0 4 G A "C4'" 1 ?
ATOM 71 O "O4'" . G A 1 4 ? 12.414 22.689 11.807 1.000 11.837 0 4 G A "O4'" 1 ?
ATOM 72 C "C3'" . G A 1 4 ? 13.220 22.553 9.623 1.000 12.978 0 4 G A "C3'" 1 ?
ATOM 73 O "O3'" . G A 1 4 ? 13.816 23.265 8.556 1.000 15.041 0 4 G A "O3'" 1 ?
ATOM 74 C "C2'" . G A 1 4 ? 14.246 21.915 10.555 1.000 12.159 0 4 G A "C2'" 1 ?
ATOM 75 O "O2'" . G A 1 4 ? 15.296 22.746 10.929 1.000 13.952 0 4 G A "O2'" 1 ?
ATOM 76 C "C1'" . G A 1 4 ? 13.376 21.653 11.775 1.000 11.705 0 4 G A "C1'" 1 ?
ATOM 77 N N9 . G A 1 4 ? 12.669 20.391 11.692 1.000 9.957 0 4 G A N9 1 ?
ATOM 78 C C8 . G A 1 4 ? 11.390 20.199 11.264 1.000 9.346 0 4 G A C8 1 ?
ATOM 79 N N7 . G A 1 4 ? 10.993 18.961 11.269 1.000 9.622 0 4 G A N7 1 ?
ATOM 80 C C5 . G A 1 4 ? 12.087 18.276 11.782 1.000 8.824 0 4 G A C5 1 ?
ATOM 81 C C6 . G A 1 4 ? 12.235 16.887 12.042 1.000 8.154 0 4 G A C6 1 ?
ATOM 82 O O6 . G A 1 4 ? 11.385 15.989 11.854 1.000 9.321 0 4 G A O6 1 ?
ATOM 83 N N1 . G A 1 4 ? 13.543 16.626 12.452 1.000 8.909 0 4 G A N1 1 ?
ATOM 84 C C2 . G A 1 4 ? 14.542 17.541 12.678 1.000 9.770 0 4 G A C2 1 ?
ATOM 85 N N2 . G A 1 4 ? 15.735 17.086 13.062 1.000 9.726 0 4 G A N2 1 ?
ATOM 86 N N3 . G A 1 4 ? 14.398 18.851 12.458 1.000 10.065 0 4 G A N3 1 ?
ATOM 87 C C4 . G A 1 4 ? 13.151 19.125 12.006 1.000 9.735 0 4 G A C4 1 ?
ATOM 88 P P . DA A 1 5 ? 13.781 22.575 7.111 1.000 18.195 0 5 DA A P 1 ?
ATOM 89 O OP1 . DA A 1 5 ? 14.333 23.641 6.223 1.000 22.112 0 5 DA A OP1 1 ?
ATOM 90 O OP2 . DA A 1 5 ? 12.524 21.881 6.735 1.000 18.226 0 5 DA A OP2 1 ?
ATOM 91 O "O5'" . DA A 1 5 ? 14.856 21.397 7.236 1.000 16.386 0 5 DA A "O5'" 1 ?
ATOM 92 C "C5'" . DA A 1 5 ? 16.211 21.697 7.586 1.000 15.818 0 5 DA A "C5'" 1 ?
ATOM 93 C "C4'" . DA A 1 5 ? 16.929 20.400 7.879 1.000 15.963 0 5 DA A "C4'" 1 ?
ATOM 94 O "O4'" . DA A 1 5 ? 16.424 19.800 9.097 1.000 14.388 0 5 DA A "O4'" 1 ?
ATOM 95 C "C3'" . DA A 1 5 ? 16.768 19.292 6.849 1.000 17.390 0 5 DA A "C3'" 1 ?
ATOM 96 O "O3'" . DA A 1 5 ? 17.547 19.541 5.689 1.000 18.456 0 5 DA A "O3'" 1 ?
ATOM 97 C "C2'" . DA A 1 5 ? 17.240 18.101 7.668 1.000 15.160 0 5 DA A "C2'" 1 ?
ATOM 98 C "C1'" . DA A 1 5 ? 16.522 18.380 8.981 1.000 14.286 0 5 DA A "C1'" 1 ?
ATOM 99 N N9 . DA A 1 5 ? 15.194 17.785 8.969 1.000 14.685 0 5 DA A N9 1 ?
ATOM 100 C C8 . DA A 1 5 ? 13.972 18.319 8.635 1.000 14.207 0 5 DA A C8 1 ?
ATOM 101 N N7 . DA A 1 5 ? 12.993 17.449 8.671 1.000 12.798 0 5 DA A N7 1 ?
ATOM 102 C C5 . DA A 1 5 ? 13.617 16.268 8.998 1.000 13.072 0 5 DA A C5 1 ?
ATOM 103 C C6 . DA A 1 5 ? 13.109 14.983 9.200 1.000 13.703 0 5 DA A C6 1 ?
ATOM 104 N N6 . DA A 1 5 ? 11.822 14.673 9.079 1.000 13.497 0 5 DA A N6 1 ?
ATOM 105 N N1 . DA A 1 5 ? 13.975 14.006 9.535 1.000 14.328 0 5 DA A N1 1 ?
ATOM 106 C C2 . DA A 1 5 ? 15.263 14.324 9.656 1.000 15.258 0 5 DA A C2 1 ?
ATOM 107 N N3 . DA A 1 5 ? 15.861 15.500 9.494 1.000 15.860 0 5 DA A N3 1 ?
ATOM 108 C C4 . DA A 1 5 ? 14.965 16.452 9.181 1.000 14.509 0 5 DA A C4 1 ?
ATOM 109 P P . A A 1 6 ? 17.042 19.002 4.261 1.000 19.030 0 6 A A P 1 ?
ATOM 110 O OP1 . A A 1 6 ? 17.977 19.675 3.315 1.000 20.244 0 6 A A OP1 1 ?
ATOM 111 O OP2 . A A 1 6 ? 15.583 19.195 4.031 1.000 20.052 0 6 A A OP2 1 ?
ATOM 112 O "O5'" . A A 1 6 ? 17.079 17.383 4.204 1.000 17.778 0 6 A A "O5'" 1 ?
ATOM 113 C "C5'" . A A 1 6 ? 18.355 16.726 4.329 1.000 18.622 0 6 A A "C5'" 1 ?
ATOM 114 C "C4'" . A A 1 6 ? 18.193 15.251 4.604 1.000 16.799 0 6 A A "C4'" 1 ?
ATOM 115 O "O4'" . A A 1 6 ? 17.462 15.058 5.838 1.000 15.080 0 6 A A "O4'" 1 ?
ATOM 116 C "C3'" . A A 1 6 ? 17.392 14.407 3.615 1.000 15.583 0 6 A A "C3'" 1 ?
ATOM 117 O "O3'" . A A 1 6 ? 18.111 14.175 2.416 1.000 14.675 0 6 A A "O3'" 1 ?
ATOM 118 C "C2'" . A A 1 6 ? 17.191 13.159 4.482 1.000 16.336 0 6 A A "C2'" 1 ?
ATOM 119 O "O2'" . A A 1 6 ? 18.358 12.395 4.621 1.000 17.708 0 6 A A "O2'" 1 ?
ATOM 120 C "C1'" . A A 1 6 ? 16.797 13.803 5.822 1.000 14.786 0 6 A A "C1'" 1 ?
ATOM 121 N N9 . A A 1 6 ? 15.353 13.994 5.954 1.000 15.598 0 6 A A N9 1 ?
ATOM 122 C C8 . A A 1 6 ? 14.660 15.161 5.786 1.000 15.531 0 6 A A C8 1 ?
ATOM 123 N N7 . A A 1 6 ? 13.353 15.045 5.890 1.000 17.973 0 6 A A N7 1 ?
ATOM 124 C C5 . A A 1 6 ? 13.164 13.697 6.109 1.000 16.159 0 6 A A C5 1 ?
ATOM 125 C C6 . A A 1 6 ? 11.985 12.930 6.327 1.000 16.004 0 6 A A C6 1 ?
ATOM 126 N N6 . A A 1 6 ? 10.750 13.435 6.321 1.000 18.530 0 6 A A N6 1 ?
ATOM 127 N N1 . A A 1 6 ? 12.137 11.606 6.520 1.000 13.530 0 6 A A N1 1 ?
ATOM 128 C C2 . A A 1 6 ? 13.372 11.102 6.525 1.000 15.833 0 6 A A C2 1 ?
ATOM 129 N N3 . A A 1 6 ? 14.533 11.726 6.369 1.000 17.483 0 6 A A N3 1 ?
ATOM 130 C C4 . A A 1 6 ? 14.375 13.043 6.179 1.000 15.855 0 6 A A C4 1 ?
ATOM 131 P P . G A 1 7 ? 17.318 13.980 1.050 1.000 15.911 0 7 G A P 1 ?
ATOM 132 O OP1 . G A 1 7 ? 18.292 13.872 -0.077 1.000 19.022 0 7 G A OP1 1 ?
ATOM 133 O OP2 . G A 1 7 ? 16.132 14.835 0.940 1.000 16.690 0 7 G A OP2 1 ?
ATOM 134 O "O5'" . G A 1 7 ? 16.651 12.516 1.164 1.000 15.628 0 7 G A "O5'" 1 ?
ATOM 135 C "C5'" . G A 1 7 ? 17.481 11.369 1.094 1.000 15.006 0 7 G A "C5'" 1 ?
ATOM 136 C "C4'" . G A 1 7 ? 16.664 10.151 1.442 1.000 14.375 0 7 G A "C4'" 1 ?
ATOM 137 O "O4'" . G A 1 7 ? 16.053 10.300 2.741 1.000 13.449 0 7 G A "O4'" 1 ?
ATOM 138 C "C3'" . G A 1 7 ? 15.470 9.795 0.564 1.000 13.809 0 7 G A "C3'" 1 ?
ATOM 139 O "O3'" . G A 1 7 ? 15.946 9.209 -0.623 1.000 14.214 0 7 G A "O3'" 1 ?
ATOM 140 C "C2'" . G A 1 7 ? 14.814 8.751 1.465 1.000 12.844 0 7 G A "C2'" 1 ?
ATOM 141 O "O2'" . G A 1 7 ? 15.563 7.557 1.508 1.000 12.869 0 7 G A "O2'" 1 ?
ATOM 142 C "C1'" . G A 1 7 ? 14.871 9.527 2.775 1.000 13.104 0 7 G A "C1'" 1 ?
ATOM 143 N N9 . G A 1 7 ? 13.729 10.411 2.962 1.000 12.981 0 7 G A N9 1 ?
ATOM 144 C C8 . G A 1 7 ? 13.665 11.780 2.879 1.000 12.271 0 7 G A C8 1 ?
ATOM 145 N N7 . G A 1 7 ? 12.474 12.264 3.107 1.000 12.832 0 7 G A N7 1 ?
ATOM 146 C C5 . G A 1 7 ? 11.703 11.134 3.365 1.000 11.981 0 7 G A C5 1 ?
ATOM 147 C C6 . G A 1 7 ? 10.317 11.012 3.661 1.000 11.859 0 7 G A C6 1 ?
ATOM 148 O O6 . G A 1 7 ? 9.474 11.901 3.829 1.000 13.952 0 7 G A O6 1 ?
ATOM 149 N N1 . G A 1 7 ? 9.967 9.686 3.865 1.000 11.094 0 7 G A N1 1 ?
ATOM 150 C C2 . G A 1 7 ? 10.786 8.600 3.735 1.000 11.190 0 7 G A C2 1 ?
ATOM 151 N N2 . G A 1 7 ? 10.251 7.387 3.930 1.000 12.168 0 7 G A N2 1 ?
ATOM 152 N N3 . G A 1 7 ? 12.078 8.709 3.437 1.000 11.766 0 7 G A N3 1 ?
ATOM 153 C C4 . G A 1 7 ? 12.464 9.996 3.280 1.000 12.134 0 7 G A C4 1 ?
ATOM 154 P P . A A 1 8 ? 15.049 9.098 -1.961 1.000 16.157 0 8 A A P 1 ?
ATOM 155 O OP1 . A A 1 8 ? 15.955 8.635 -3.072 1.000 17.875 0 8 A A OP1 1 ?
ATOM 156 O OP2 . A A 1 8 ? 14.270 10.357 -2.124 1.000 17.809 0 8 A A OP2 1 ?
ATOM 157 O "O5'" . A A 1 8 ? 13.958 8.005 -1.589 1.000 17.308 0 8 A A "O5'" 1 ?
ATOM 158 C "C5'" . A A 1 8 ? 14.355 6.644 -1.406 1.000 17.549 0 8 A A "C5'" 1 ?
ATOM 159 C "C4'" . A A 1 8 ? 13.147 5.836 -1.029 1.000 17.431 0 8 A A "C4'" 1 ?
ATOM 160 O "O4'" . A A 1 8 ? 12.581 6.312 0.218 1.000 15.260 0 8 A A "O4'" 1 ?
ATOM 161 C "C3'" . A A 1 8 ? 11.963 5.879 -1.995 1.000 17.937 0 8 A A "C3'" 1 ?
ATOM 162 O "O3'" . A A 1 8 ? 12.156 4.974 -3.080 1.000 18.172 0 8 A A "O3'" 1 ?
ATOM 163 C "C2'" . A A 1 8 ? 10.856 5.384 -1.066 1.000 17.411 0 8 A A "C2'" 1 ?
ATOM 164 O "O2'" . A A 1 8 ? 10.957 3.998 -0.809 1.000 21.121 0 8 A A "O2'" 1 ?
ATOM 165 C "C1'" . A A 1 8 ? 11.177 6.180 0.190 1.000 16.816 0 8 A A "C1'" 1 ?
ATOM 166 N N9 . A A 1 8 ? 10.612 7.521 0.246 1.000 13.564 0 8 A A N9 1 ?
ATOM 167 C C8 . A A 1 8 ? 11.261 8.705 0.022 1.000 13.149 0 8 A A C8 1 ?
ATOM 168 N N7 . A A 1 8 ? 10.525 9.781 0.214 1.000 12.659 0 8 A A N7 1 ?
ATOM 169 C C5 . A A 1 8 ? 9.314 9.252 0.625 1.000 11.311 0 8 A A C5 1 ?
ATOM 170 C C6 . A A 1 8 ? 8.093 9.862 0.969 1.000 10.895 0 8 A A C6 1 ?
ATOM 171 N N6 . A A 1 8 ? 7.959 11.169 1.035 1.000 12.989 0 8 A A N6 1 ?
ATOM 172 N N1 . A A 1 8 ? 7.076 9.054 1.319 1.000 12.841 0 8 A A N1 1 ?
ATOM 173 C C2 . A A 1 8 ? 7.257 7.731 1.299 1.000 14.414 0 8 A A C2 1 ?
ATOM 174 N N3 . A A 1 8 ? 8.344 7.031 0.985 1.000 13.493 0 8 A A N3 1 ?
ATOM 175 C C4 . A A 1 8 ? 9.346 7.866 0.654 1.000 13.672 0 8 A A C4 1 ?
ATOM 176 P P . U A 1 9 ? 11.704 5.395 -4.562 1.000 21.084 0 9 U A P 1 ?
ATOM 177 O OP1 . U A 1 9 ? 12.291 4.454 -5.570 1.000 23.474 0 9 U A OP1 1 ?
ATOM 178 O OP2 . U A 1 9 ? 11.929 6.843 -4.739 1.000 19.326 0 9 U A OP2 1 ?
ATOM 179 O "O5'" . U A 1 9 ? 10.142 5.129 -4.507 1.000 19.113 0 9 U A "O5'" 1 ?
ATOM 180 C "C5'" . U A 1 9 ? 9.657 3.815 -4.202 1.000 20.824 0 9 U A "C5'" 1 ?
ATOM 181 C "C4'" . U A 1 9 ? 8.208 3.920 -3.819 1.000 20.665 0 9 U A "C4'" 1 ?
ATOM 182 O "O4'" . U A 1 9 ? 8.054 4.668 -2.580 1.000 18.560 0 9 U A "O4'" 1 ?
ATOM 183 C "C3'" . U A 1 9 ? 7.311 4.694 -4.795 1.000 21.011 0 9 U A "C3'" 1 ?
ATOM 184 O "O3'" . U A 1 9 ? 6.942 3.928 -5.931 1.000 21.330 0 9 U A "O3'" 1 ?
ATOM 185 C "C2'" . U A 1 9 ? 6.117 4.975 -3.897 1.000 19.762 0 9 U A "C2'" 1 ?
ATOM 186 O "O2'" . U A 1 9 ? 5.347 3.843 -3.580 1.000 21.462 0 9 U A "O2'" 1 ?
ATOM 187 C "C1'" . U A 1 9 ? 6.829 5.378 -2.611 1.000 18.347 0 9 U A "C1'" 1 ?
ATOM 188 N N1 . U A 1 9 ? 7.106 6.830 -2.539 1.000 15.689 0 9 U A N1 1 ?
ATOM 189 C C2 . U A 1 9 ? 6.080 7.644 -2.092 1.000 14.177 0 9 U A C2 1 ?
ATOM 190 O O2 . U A 1 9 ? 4.969 7.200 -1.849 1.000 18.468 0 9 U A O2 1 ?
ATOM 191 N N3 . U A 1 9 ? 6.401 8.978 -2.003 1.000 15.066 0 9 U A N3 1 ?
ATOM 192 C C4 . U A 1 9 ? 7.620 9.565 -2.291 1.000 14.183 0 9 U A C4 1 ?
ATOM 193 O O4 . U A 1 9 ? 7.784 10.780 -2.175 1.000 16.521 0 9 U A O4 1 ?
ATOM 194 C C5 . U A 1 9 ? 8.624 8.656 -2.753 1.000 15.009 0 9 U A C5 1 ?
ATOM 195 C C6 . U A 1 9 ? 8.333 7.350 -2.865 1.000 14.212 0 9 U A C6 1 ?
ATOM 196 P P . C A 1 10 ? 6.700 4.651 -7.334 1.000 23.539 0 10 C A P 1 ?
ATOM 197 O OP1 . C A 1 10 ? 6.523 3.573 -8.358 1.000 28.126 0 10 C A OP1 1 ?
ATOM 198 O OP2 . C A 1 10 ? 7.702 5.718 -7.594 1.000 21.465 0 10 C A OP2 1 ?
ATOM 199 O "O5'" . C A 1 10 ? 5.300 5.395 -7.114 1.000 20.973 0 10 C A "O5'" 1 ?
ATOM 200 C "C5'" . C A 1 10 ? 4.115 4.629 -6.857 1.000 19.233 0 10 C A "C5'" 1 ?
ATOM 201 C "C4'" . C A 1 10 ? 3.013 5.571 -6.438 1.000 18.791 0 10 C A "C4'" 1 ?
ATOM 202 O "O4'" . C A 1 10 ? 3.349 6.228 -5.179 1.000 17.166 0 10 C A "O4'" 1 ?
ATOM 203 C "C3'" . C A 1 10 ? 2.713 6.735 -7.394 1.000 18.975 0 10 C A "C3'" 1 ?
ATOM 204 O "O3'" . C A 1 10 ? 1.886 6.321 -8.474 1.000 21.133 0 10 C A "O3'" 1 ?
ATOM 205 C "C2'" . C A 1 10 ? 1.924 7.618 -6.446 1.000 17.253 0 10 C A "C2'" 1 ?
ATOM 206 O "O2'" . C A 1 10 ? 0.664 7.105 -6.107 1.000 18.517 0 10 C A "O2'" 1 ?
ATOM 207 C "C1'" . C A 1 10 ? 2.765 7.506 -5.177 1.000 17.753 0 10 C A "C1'" 1 ?
ATOM 208 N N1 . C A 1 10 ? 3.829 8.530 -5.140 1.000 14.591 0 10 C A N1 1 ?
ATOM 209 C C2 . C A 1 10 ? 3.416 9.795 -4.727 1.000 13.858 0 10 C A C2 1 ?
ATOM 210 O O2 . C A 1 10 ? 2.202 9.968 -4.475 1.000 14.327 0 10 C A O2 1 ?
ATOM 211 N N3 . C A 1 10 ? 4.358 10.767 -4.648 1.000 13.113 0 10 C A N3 1 ?
ATOM 212 C C4 . C A 1 10 ? 5.624 10.529 -4.983 1.000 12.896 0 10 C A C4 1 ?
ATOM 213 N N4 . C A 1 10 ? 6.471 11.528 -4.929 1.000 13.274 0 10 C A N4 1 ?
ATOM 214 C C5 . C A 1 10 ? 6.045 9.246 -5.442 1.000 13.656 0 10 C A C5 1 ?
ATOM 215 C C6 . C A 1 10 ? 5.122 8.280 -5.486 1.000 13.475 0 10 C A C6 1 ?
ATOM 216 P P . U A 1 11 ? 2.019 7.009 -9.902 1.000 22.287 0 11 U A P 1 ?
ATOM 217 O OP1 . U A 1 11 ? 1.219 6.294 -10.948 1.000 23.579 0 11 U A OP1 1 ?
ATOM 218 O OP2 . U A 1 11 ? 3.416 7.368 -10.241 1.000 22.637 0 11 U A OP2 1 ?
ATOM 219 O "O5'" . U A 1 11 ? 1.396 8.467 -9.625 1.000 19.066 0 11 U A "O5'" 1 ?
ATOM 220 C "C5'" . U A 1 11 ? 0.004 8.540 -9.331 1.000 17.309 0 11 U A "C5'" 1 ?
ATOM 221 C "C4'" . U A 1 11 ? -0.343 9.916 -8.814 1.000 17.727 0 11 U A "C4'" 1 ?
ATOM 222 O "O4'" . U A 1 11 ? 0.447 10.237 -7.644 1.000 18.313 0 11 U A "O4'" 1 ?
ATOM 223 C "C3'" . U A 1 11 ? -0.039 11.104 -9.736 1.000 17.252 0 11 U A "C3'" 1 ?
ATOM 224 O "O3'" . U A 1 11 ? -0.962 11.188 -10.804 1.000 17.316 0 11 U A "O3'" 1 ?
ATOM 225 C "C2'" . U A 1 11 ? -0.239 12.254 -8.756 1.000 18.294 0 11 U A "C2'" 1 ?
ATOM 226 O "O2'" . U A 1 11 ? -1.592 12.493 -8.444 1.000 22.136 0 11 U A "O2'" 1 ?
ATOM 227 C "C1'" . U A 1 11 ? 0.485 11.644 -7.561 1.000 17.307 0 11 U A "C1'" 1 ?
ATOM 228 N N1 . U A 1 11 ? 1.853 12.003 -7.571 1.000 16.452 0 11 U A N1 1 ?
ATOM 229 C C2 . U A 1 11 ? 2.109 13.306 -7.178 1.000 15.619 0 11 U A C2 1 ?
ATOM 230 O O2 . U A 1 11 ? 1.219 14.079 -6.863 1.000 19.858 0 11 U A O2 1 ?
ATOM 231 N N3 . U A 1 11 ? 3.420 13.605 -7.151 1.000 14.379 0 11 U A N3 1 ?
ATOM 232 C C4 . U A 1 11 ? 4.484 12.803 -7.494 1.000 15.433 0 11 U A C4 1 ?
ATOM 233 O O4 . U A 1 11 ? 5.625 13.252 -7.438 1.000 18.756 0 11 U A O4 1 ?
ATOM 234 C C5 . U A 1 11 ? 4.128 11.509 -7.974 1.000 17.205 0 11 U A C5 1 ?
ATOM 235 C C6 . U A 1 11 ? 2.847 11.163 -7.981 1.000 14.246 0 11 U A C6 1 ?
HETATM 236 P P . SUR A 1 12 ? -0.633 11.913 -12.213 1.000 15.826 0 12 SUR A P 1 ?
HETATM 237 O OP1 . SUR A 1 12 ? -1.800 11.427 -12.889 1.000 17.278 0 12 SUR A OP1 1 ?
HETATM 238 O OP2 . SUR A 1 12 ? 0.798 11.754 -12.517 1.000 15.425 0 12 SUR A OP2 1 ?
HETATM 239 O "O5'" . SUR A 1 12 ? -0.852 13.465 -11.806 1.000 12.924 0 12 SUR A "O5'" 1 ?
HETATM 240 C "C5'" . SUR A 1 12 ? -2.125 13.994 -11.591 1.000 12.307 0 12 SUR A "C5'" 1 ?
HETATM 241 C "C4'" . SUR A 1 12 ? -1.998 15.486 -11.401 1.000 12.134 0 12 SUR A "C4'" 1 ?
HETATM 242 O "O4'" . SUR A 1 12 ? -1.234 15.807 -10.226 1.000 11.676 0 12 SUR A "O4'" 1 ?
HETATM 243 C "C3'" . SUR A 1 12 ? -1.209 16.196 -12.502 1.000 11.810 0 12 SUR A "C3'" 1 ?
HETATM 244 C "C1'" . SUR A 1 12 ? -0.473 17.002 -10.502 1.000 11.822 0 12 SUR A "C1'" 1 ?
HETATM 245 N N1 . SUR A 1 12 ? 0.954 16.596 -10.340 1.000 12.216 0 12 SUR A N1 1 ?
HETATM 246 C "C2'" . SUR A 1 12 ? -0.855 17.479 -11.896 1.000 11.725 0 12 SUR A "C2'" 1 ?
HETATM 247 C C6 . SUR A 1 12 ? 1.354 15.256 -10.429 1.000 13.754 0 12 SUR A C6 1 ?
HETATM 248 C C2 . SUR A 1 12 ? 1.871 17.540 -10.113 1.000 13.593 0 12 SUR A C2 1 ?
HETATM 249 C C5 . SUR A 1 12 ? 2.672 14.898 -10.245 1.000 13.534 0 12 SUR A C5 1 ?
HETATM 250 S S2 . SUR A 1 12 ? 1.454 19.215 -10.068 1.000 14.132 0 12 SUR A S2 1 ?
HETATM 251 N N3 . SUR A 1 12 ? 3.201 17.168 -9.919 1.000 12.451 0 12 SUR A N3 1 ?
HETATM 252 C C4 . SUR A 1 12 ? 3.609 15.855 -9.972 1.000 14.021 0 12 SUR A C4 1 ?
HETATM 253 O O4 . SUR A 1 12 ? 4.794 15.590 -9.785 1.000 14.806 0 12 SUR A O4 1 ?
HETATM 254 O "O2'" . SUR A 1 12 ? -2.023 18.314 -11.665 1.000 12.546 0 12 SUR A "O2'" 1 ?
HETATM 255 O "O3'" . SUR A 1 12 ? -2.035 16.409 -13.651 1.000 11.024 0 12 SUR A "O3'" 1 ?
ATOM 256 P P . C A 1 13 ? -1.404 16.356 -15.112 1.000 12.523 0 13 C A P 1 ?
ATOM 257 O OP1 . C A 1 13 ? -2.548 16.421 -16.134 1.000 13.443 0 13 C A OP1 1 ?
ATOM 258 O OP2 . C A 1 13 ? -0.377 15.335 -15.356 1.000 13.572 0 13 C A OP2 1 ?
ATOM 259 O "O5'" . C A 1 13 ? -0.556 17.700 -15.297 1.000 12.153 0 13 C A "O5'" 1 ?
ATOM 260 C "C5'" . C A 1 13 ? -1.225 18.955 -15.215 1.000 11.622 0 13 C A "C5'" 1 ?
ATOM 261 C "C4'" . C A 1 13 ? -0.225 20.067 -15.067 1.000 11.318 0 13 C A "C4'" 1 ?
ATOM 262 O "O4'" . C A 1 13 ? 0.427 19.948 -13.781 1.000 11.200 0 13 C A "O4'" 1 ?
ATOM 263 C "C3'" . C A 1 13 ? 0.943 20.119 -16.059 1.000 10.396 0 13 C A "C3'" 1 ?
ATOM 264 O "O3'" . C A 1 13 ? 0.558 20.698 -17.287 1.000 9.954 0 13 C A "O3'" 1 ?
ATOM 265 C "C2'" . C A 1 13 ? 1.877 21.057 -15.302 1.000 9.453 0 13 C A "C2'" 1 ?
ATOM 266 O "O2'" . C A 1 13 ? 1.419 22.389 -15.267 1.000 11.229 0 13 C A "O2'" 1 ?
ATOM 267 C "C1'" . C A 1 13 ? 1.730 20.492 -13.893 1.000 10.019 0 13 C A "C1'" 1 ?
ATOM 268 N N1 . C A 1 13 ? 2.721 19.433 -13.600 1.000 9.724 0 13 C A N1 1 ?
ATOM 269 C C2 . C A 1 13 ? 4.011 19.872 -13.229 1.000 10.320 0 13 C A C2 1 ?
ATOM 270 O O2 . C A 1 13 ? 4.263 21.084 -13.234 1.000 11.081 0 13 C A O2 1 ?
ATOM 271 N N3 . C A 1 13 ? 4.944 18.938 -12.960 1.000 9.967 0 13 C A N3 1 ?
ATOM 272 C C4 . C A 1 13 ? 4.658 17.634 -13.007 1.000 10.365 0 13 C A C4 1 ?
ATOM 273 N N4 . C A 1 13 ? 5.606 16.772 -12.676 1.000 10.692 0 13 C A N4 1 ?
ATOM 274 C C5 . C A 1 13 ? 3.357 17.170 -13.407 1.000 10.059 0 13 C A C5 1 ?
ATOM 275 C C6 . C A 1 13 ? 2.439 18.104 -13.683 1.000 9.922 0 13 C A C6 1 ?
ATOM 276 P P . U A 1 14 ? 1.260 20.293 -18.664 1.000 10.567 0 14 U A P 1 ?
ATOM 277 O OP1 . U A 1 14 ? 0.486 20.907 -19.787 1.000 12.665 0 14 U A OP1 1 ?
ATOM 278 O OP2 . U A 1 14 ? 1.494 18.850 -18.634 1.000 12.556 0 14 U A OP2 1 ?
ATOM 279 O "O5'" . U A 1 14 ? 2.708 20.957 -18.611 1.000 9.038 0 14 U A "O5'" 1 ?
ATOM 280 C "C5'" . U A 1 14 ? 2.792 22.382 -18.740 1.000 9.460 0 14 U A "C5'" 1 ?
ATOM 281 C "C4'" . U A 1 14 ? 4.171 22.841 -18.341 1.000 8.910 0 14 U A "C4'" 1 ?
ATOM 282 O "O4'" . U A 1 14 ? 4.497 22.430 -17.004 1.000 8.557 0 14 U A "O4'" 1 ?
ATOM 283 C "C3'" . U A 1 14 ? 5.360 22.349 -19.172 1.000 8.251 0 14 U A "C3'" 1 ?
ATOM 284 O "O3'" . U A 1 14 ? 5.459 23.099 -20.365 1.000 8.509 0 14 U A "O3'" 1 ?
ATOM 285 C "C2'" . U A 1 14 ? 6.497 22.664 -18.200 1.000 8.355 0 14 U A "C2'" 1 ?
ATOM 286 O "O2'" . U A 1 14 ? 6.701 24.058 -18.102 1.000 8.778 0 14 U A "O2'" 1 ?
ATOM 287 C "C1'" . U A 1 14 ? 5.895 22.165 -16.911 1.000 8.052 0 14 U A "C1'" 1 ?
ATOM 288 N N1 . U A 1 14 ? 6.122 20.724 -16.678 1.000 7.208 0 14 U A N1 1 ?
ATOM 289 C C2 . U A 1 14 ? 7.340 20.362 -16.139 1.000 7.549 0 14 U A C2 1 ?
ATOM 290 O O2 . U A 1 14 ? 8.257 21.140 -16.010 1.000 7.638 0 14 U A O2 1 ?
ATOM 291 N N3 . U A 1 14 ? 7.464 19.031 -15.834 1.000 7.314 0 14 U A N3 1 ?
ATOM 292 C C4 . U A 1 14 ? 6.506 18.044 -15.924 1.000 7.706 0 14 U A C4 1 ?
ATOM 293 O O4 . U A 1 14 ? 6.759 16.867 -15.624 1.000 9.588 0 14 U A O4 1 ?
ATOM 294 C C5 . U A 1 14 ? 5.263 18.508 -16.477 1.000 7.702 0 14 U A C5 1 ?
ATOM 295 C C6 . U A 1 14 ? 5.116 19.799 -16.827 1.000 7.656 0 14 U A C6 1 ?
ATOM 296 P P . C A 1 15 ? 6.164 22.537 -21.683 1.000 9.883 0 15 C A P 1 ?
ATOM 297 O OP1 . C A 1 15 ? 5.850 23.485 -22.788 1.000 11.131 0 15 C A OP1 1 ?
ATOM 298 O OP2 . C A 1 15 ? 5.852 21.094 -21.872 1.000 12.068 0 15 C A OP2 1 ?
ATOM 299 O "O5'" . C A 1 15 ? 7.731 22.567 -21.392 1.000 9.745 0 15 C A "O5'" 1 ?
ATOM 300 C "C5'" . C A 1 15 ? 8.385 23.834 -21.169 1.000 9.182 0 15 C A "C5'" 1 ?
ATOM 301 C "C4'" . C A 1 15 ? 9.778 23.614 -20.607 1.000 8.689 0 15 C A "C4'" 1 ?
ATOM 302 O "O4'" . C A 1 15 ? 9.710 22.967 -19.326 1.000 8.458 0 15 C A "O4'" 1 ?
ATOM 303 C "C3'" . C A 1 15 ? 10.663 22.679 -21.428 1.000 9.027 0 15 C A "C3'" 1 ?
ATOM 304 O "O3'" . C A 1 15 ? 11.253 23.377 -22.527 1.000 9.294 0 15 C A "O3'" 1 ?
ATOM 305 C "C2'" . C A 1 15 ? 11.710 22.298 -20.406 1.000 9.294 0 15 C A "C2'" 1 ?
ATOM 306 O "O2'" . C A 1 15 ? 12.570 23.355 -20.021 1.000 10.394 0 15 C A "O2'" 1 ?
ATOM 307 C "C1'" . C A 1 15 ? 10.790 22.062 -19.210 1.000 8.393 0 15 C A "C1'" 1 ?
ATOM 308 N N1 . C A 1 15 ? 10.215 20.685 -19.112 1.000 7.760 0 15 C A N1 1 ?
ATOM 309 C C2 . C A 1 15 ? 11.013 19.716 -18.491 1.000 7.999 0 15 C A C2 1 ?
ATOM 310 O O2 . C A 1 15 ? 12.191 20.004 -18.204 1.000 7.977 0 15 C A O2 1 ?
ATOM 311 N N3 . C A 1 15 ? 10.490 18.477 -18.268 1.000 7.668 0 15 C A N3 1 ?
ATOM 312 C C4 . C A 1 15 ? 9.237 18.204 -18.610 1.000 8.581 0 15 C A C4 1 ?
ATOM 313 N N4 . C A 1 15 ? 8.757 17.014 -18.306 1.000 8.881 0 15 C A N4 1 ?
ATOM 314 C C5 . C A 1 15 ? 8.409 19.150 -19.283 1.000 7.871 0 15 C A C5 1 ?
ATOM 315 C C6 . C A 1 15 ? 8.940 20.366 -19.514 1.000 7.884 0 15 C A C6 1 ?
ATOM 316 P P . U A 1 16 ? 11.482 22.609 -23.893 1.000 10.592 0 16 U A P 1 ?
ATOM 317 O OP1 . U A 1 16 ? 12.044 23.649 -24.813 1.000 12.340 0 16 U A OP1 1 ?
ATOM 318 O OP2 . U A 1 16 ? 10.307 21.816 -24.304 1.000 10.810 0 16 U A OP2 1 ?
ATOM 319 O "O5'" . U A 1 16 ? 12.574 21.480 -23.591 1.000 9.287 0 16 U A "O5'" 1 ?
ATOM 320 C "C5'" . U A 1 16 ? 13.912 21.916 -23.319 1.000 9.015 0 16 U A "C5'" 1 ?
ATOM 321 C "C4'" . U A 1 16 ? 14.726 20.740 -22.853 1.000 9.101 0 16 U A "C4'" 1 ?
ATOM 322 O "O4'" . U A 1 16 ? 14.201 20.248 -21.605 1.000 8.808 0 16 U A "O4'" 1 ?
ATOM 323 C "C3'" . U A 1 16 ? 14.770 19.504 -23.752 1.000 9.075 0 16 U A "C3'" 1 ?
ATOM 324 O "O3'" . U A 1 16 ? 15.694 19.680 -24.837 1.000 9.539 0 16 U A "O3'" 1 ?
ATOM 325 C "C2'" . U A 1 16 ? 15.226 18.446 -22.753 1.000 9.276 0 16 U A "C2'" 1 ?
ATOM 326 O "O2'" . U A 1 16 ? 16.635 18.571 -22.539 1.000 10.680 0 16 U A "O2'" 1 ?
ATOM 327 C "C1'" . U A 1 16 ? 14.421 18.858 -21.517 1.000 8.717 0 16 U A "C1'" 1 ?
ATOM 328 N N1 . U A 1 16 ? 13.114 18.153 -21.431 1.000 7.673 0 16 U A N1 1 ?
ATOM 329 C C2 . U A 1 16 ? 13.126 16.883 -20.878 1.000 8.391 0 16 U A C2 1 ?
ATOM 330 O O2 . U A 1 16 ? 14.142 16.313 -20.537 1.000 9.249 0 16 U A O2 1 ?
ATOM 331 N N3 . U A 1 16 ? 11.901 16.299 -20.796 1.000 8.557 0 16 U A N3 1 ?
ATOM 332 C C4 . U A 1 16 ? 10.691 16.785 -21.224 1.000 7.969 0 16 U A C4 1 ?
ATOM 333 O O4 . U A 1 16 ? 9.685 16.068 -21.154 1.000 8.721 0 16 U A O4 1 ?
ATOM 334 C C5 . U A 1 16 ? 10.752 18.104 -21.788 1.000 7.866 0 16 U A C5 1 ?
ATOM 335 C C6 . U A 1 16 ? 11.946 18.726 -21.869 1.000 7.222 0 16 U A C6 1 ?
HETATM 336 MG MG . MG B 2 . ? 12.336 24.816 -26.364 1.000 27.924 0 101 MG A MG 1 ?
HETATM 337 O O . HOH C 3 . ? 16.242 10.553 6.545 1.000 33.861 0 201 HOH A O 1 ?
HETATM 338 O O . HOH C 3 . ? 7.170 11.854 -8.476 1.000 38.775 0 202 HOH A O 1 ?
HETATM 339 O O . HOH C 3 . ? -0.340 15.919 -7.010 1.000 46.238 0 203 HOH A O 1 ?
HETATM 340 O O . HOH C 3 . ? 11.237 16.228 5.356 1.000 28.762 0 204 HOH A O 1 ?
HETATM 341 O O . HOH C 3 . ? 15.837 23.824 13.103 1.000 34.791 0 205 HOH A O 1 ?
HETATM 342 O O . HOH C 3 . ? -0.579 20.555 -22.024 1.000 30.757 0 206 HOH A O 1 ?
HETATM 343 O O . HOH C 3 . ? 8.948 24.923 5.922 1.000 33.766 0 207 HOH A O 1 ?
HETATM 344 O O . HOH C 3 . ? 1.282 10.399 16.567 1.000 31.403 0 208 HOH A O 1 ?
HETATM 345 O O . HOH C 3 . ? 15.331 7.933 -5.410 1.000 39.912 0 209 HOH A O 1 ?
HETATM 346 O O . HOH C 3 . ? 18.798 15.078 -2.261 1.000 32.343 0 210 HOH A O 1 ?
HETATM 347 O O . HOH C 3 . ? -0.182 18.368 10.008 1.000 23.699 0 211 HOH A O 1 ?
HETATM 348 O O . HOH C 3 . ? -2.989 14.432 -17.685 1.000 28.285 0 212 HOH A O 1 ?
HETATM 349 O O . HOH C 3 . ? 5.613 14.617 -16.078 1.000 24.513 0 213 HOH A O 1 ?
HETATM 350 O O . HOH C 3 . ? 16.054 17.507 -26.228 1.000 22.010 0 214 HOH A O 1 ?
HETATM 351 O O . HOH C 3 . ? 9.530 12.713 -2.317 1.000 24.579 0 215 HOH A O 1 ?
HETATM 352 O O . HOH C 3 . ? 8.059 4.491 1.623 1.000 35.509 0 216 HOH A O 1 ?
HETATM 353 O O . HOH C 3 . ? 9.087 14.494 3.503 1.000 28.618 0 217 HOH A O 1 ?
HETATM 354 O O . HOH C 3 . ? 0.002 23.766 -17.041 0.330 12.924 0 218 HOH A O 1 ?
HETATM 355 O O . HOH C 3 . ? 16.701 24.480 9.460 1.000 25.993 0 219 HOH A O 1 ?
HETATM 356 O O . HOH C 3 . ? 2.340 24.607 10.335 1.000 38.178 0 220 HOH A O 1 ?
HETATM 357 O O . HOH C 3 . ? 11.879 14.865 2.802 1.000 17.412 0 221 HOH A O 1 ?
HETATM 358 O O . HOH C 3 . ? 3.454 17.507 -19.887 1.000 28.910 0 222 HOH A O 1 ?
HETATM 359 O O . HOH C 3 . ? 7.203 16.656 -22.028 1.000 19.119 0 223 HOH A O 1 ?
HETATM 360 O O . HOH C 3 . ? 8.905 15.671 10.839 1.000 21.438 0 224 HOH A O 1 ?
HETATM 361 O O . HOH C 3 . ? 18.524 15.193 9.811 1.000 29.955 0 225 HOH A O 1 ?
HETATM 362 O O . HOH C 3 . ? 11.849 9.312 -3.645 1.000 24.670 0 226 HOH A O 1 ?
HETATM 363 O O . HOH C 3 . ? 10.729 22.700 4.881 1.000 37.368 0 227 HOH A O 1 ?
HETATM 364 O O . HOH C 3 . ? 1.037 22.279 8.321 1.000 44.542 0 228 HOH A O 1 ?
HETATM 365 O O . HOH C 3 . ? 4.078 17.171 11.650 1.000 29.261 0 229 HOH A O 1 ?
HETATM 366 O O . HOH C 3 . ? 5.510 18.661 -20.710 1.000 34.724 0 230 HOH A O 1 ?
HETATM 367 O O . HOH C 3 . ? 1.858 19.656 19.189 1.000 26.141 0 231 HOH A O 1 ?
HETATM 368 O O . HOH C 3 . ? 8.588 19.141 10.008 1.000 25.321 0 232 HOH A O 1 ?
HETATM 369 O O . HOH C 3 . ? 11.970 25.403 -18.330 1.000 21.686 0 233 HOH A O 1 ?
HETATM 370 O O . HOH C 3 . ? 6.506 16.141 12.104 1.000 17.872 0 234 HOH A O 1 ?
HETATM 371 O O . HOH C 3 . ? 11.817 26.333 -25.238 1.000 30.570 0 235 HOH A O 1 ?
HETATM 372 O O . HOH C 3 . ? 4.292 23.562 8.067 1.000 39.788 0 236 HOH A O 1 ?
HETATM 373 O O . HOH C 3 . ? 6.706 13.818 -10.617 1.000 27.218 0 237 HOH A O 1 ?
HETATM 374 O O . HOH C 3 . ? 8.345 27.072 8.840 1.000 39.548 0 238 HOH A O 1 ?
HETATM 375 O O . HOH C 3 . ? 5.126 14.645 14.955 1.000 28.323 0 239 HOH A O 1 ?
HETATM 376 O O . HOH C 3 . ? 7.361 13.987 16.379 1.000 17.404 0 240 HOH A O 1 ?
HETATM 377 O O . HOH C 3 . ? 10.436 17.839 7.727 1.000 20.575 0 241 HOH A O 1 ?
HETATM 378 O O . HOH C 3 . ? 10.169 20.499 7.257 1.000 25.425 0 242 HOH A O 1 ?
HETATM 379 O O . HOH C 3 . ? 16.594 15.063 -20.718 1.000 23.927 0 243 HOH A O 1 ?
HETATM 380 O O . HOH C 3 . ? 12.857 25.233 4.508 1.000 33.819 0 244 HOH A O 1 ?
HETATM 381 O O . HOH C 3 . ? 9.313 7.699 -6.464 1.000 32.846 0 245 HOH A O 1 ?
HETATM 382 O O . HOH C 3 . ? 12.401 11.790 -0.278 1.000 28.609 0 246 HOH A O 1 ?
HETATM 383 O O . HOH C 3 . ? -1.907 21.086 -12.001 1.000 21.698 0 247 HOH A O 1 ?
HETATM 384 O O . HOH C 3 . ? 1.732 14.068 -14.020 1.000 17.745 0 248 HOH A O 1 ?
HETATM 385 O O . HOH C 3 . ? 14.123 16.019 2.495 1.000 29.235 0 249 HOH A O 1 ?
HETATM 386 O O . HOH C 3 . ? 20.583 11.884 2.975 0.330 13.408 0 250 HOH A O 1 ?
HETATM 387 O O . HOH C 3 . ? 5.514 23.133 16.734 1.000 21.264 0 251 HOH A O 1 ?
HETATM 388 O O . HOH C 3 . ? 11.144 22.756 15.043 1.000 18.439 0 252 HOH A O 1 ?
HETATM 389 O O . HOH C 3 . ? -0.691 17.341 -19.593 1.000 13.666 0 253 HOH A O 1 ?
HETATM 390 O O . HOH C 3 . ? 3.435 12.008 -11.537 1.000 20.057 0 254 HOH A O 1 ?
HETATM 391 O O . HOH C 3 . ? 15.167 18.952 1.244 1.000 38.306 0 255 HOH A O 1 ?
HETATM 392 O O . HOH C 3 . ? 5.610 26.230 -22.089 1.000 39.029 0 256 HOH A O 1 ?
HETATM 393 O O . HOH C 3 . ? 8.766 26.521 12.224 1.000 22.920 0 257 HOH A O 1 ?
HETATM 394 O O . HOH C 3 . ? 17.055 17.380 0.047 1.000 21.912 0 258 HOH A O 1 ?
HETATM 395 O O . HOH C 3 . ? 2.129 16.628 -16.960 1.000 22.403 0 259 HOH A O 1 ?
HETATM 396 O O . HOH C 3 . ? 8.291 20.051 -23.298 1.000 20.210 0 260 HOH A O 1 ?
HETATM 397 O O . HOH C 3 . ? 7.859 23.163 -24.930 1.000 37.735 0 261 HOH A O 1 ?
HETATM 398 O O . HOH C 3 . ? 5.699 11.618 18.466 1.000 37.617 0 262 HOH A O 1 ?
HETATM 399 O O . HOH C 3 . ? 1.559 23.926 13.016 1.000 32.925 0 263 HOH A O 1 ?
HETATM 400 O O . HOH C 3 . ? 2.249 18.003 9.076 1.000 32.902 0 264 HOH A O 1 ?
HETATM 401 O O . HOH C 3 . ? 12.043 5.104 3.593 1.000 28.378 0 265 HOH A O 1 ?
HETATM 402 O O . HOH C 3 . ? 12.958 19.146 5.331 1.000 31.497 0 266 HOH A O 1 ?
HETATM 403 O O . HOH C 3 . ? -1.649 12.565 -15.586 1.000 32.653 0 267 HOH A O 1 ?
HETATM 404 O O . HOH C 3 . ? -0.000 23.768 -20.242 0.330 16.991 0 268 HOH A O 1 ?
HETATM 405 O O . HOH C 3 . ? -0.656 9.239 -4.563 1.000 26.546 0 269 HOH A O 1 ?
HETATM 406 O O . HOH C 3 . ? 6.272 18.247 9.789 1.000 30.710 0 270 HOH A O 1 ?
HETATM 407 O O . HOH C 3 . ? 14.488 24.810 -26.086 1.000 24.777 0 271 HOH A O 1 ?
HETATM 408 O O . HOH C 3 . ? 15.456 20.415 14.779 1.000 30.645 0 272 HOH A O 1 ?
HETATM 409 O O . HOH C 3 . ? 10.129 24.809 -26.821 1.000 35.705 0 273 HOH A O 1 ?
HETATM 410 O O . HOH C 3 . ? 9.237 10.869 -5.933 1.000 28.098 0 274 HOH A O 1 ?
HETATM 411 O O . HOH C 3 . ? 6.002 16.403 -19.386 1.000 15.595 0 275 HOH A O 1 ?
HETATM 412 O O . HOH C 3 . ? 20.583 11.884 -0.175 0.330 32.950 0 276 HOH A O 1 ?
HETATM 413 O O . HOH C 3 . ? 5.955 25.390 7.854 1.000 32.198 0 277 HOH A O 1 ?
HETATM 414 O O . HOH C 3 . ? 16.759 25.200 7.204 1.000 38.389 0 278 HOH A O 1 ?
HETATM 415 O O . HOH C 3 . ? 12.840 22.852 -27.671 1.000 30.716 0 279 HOH A O 1 ?
HETATM 416 O O . HOH C 3 . ? 13.429 14.163 -0.388 1.000 32.608 0 280 HOH A O 1 ?
HETATM 417 O O . HOH C 3 . ? 4.743 13.850 -13.182 1.000 22.261 0 281 HOH A O 1 ?
HETATM 418 O O . HOH C 3 . ? 7.665 13.577 13.165 1.000 29.027 0 282 HOH A O 1 ?
HETATM 419 O O . HOH C 3 . ? 10.046 13.512 0.231 1.000 30.584 0 283 HOH A O 1 ?
HETATM 420 O O . HOH C 3 . ? -2.104 11.326 -5.464 1.000 38.536 0 284 HOH A O 1 ?
HETATM 421 O O . HOH C 3 . ? 8.366 12.392 18.768 1.000 32.394 0 285 HOH A O 1 ?
HETATM 422 O O . HOH C 3 . ? -0.000 23.768 -12.527 0.330 17.059 0 286 HOH A O 1 ?
HETATM 423 O O . HOH C 3 . ? 20.177 14.402 7.772 1.000 35.743 0 287 HOH A O 1 ?
HETATM 424 O O . HOH C 3 . ? 6.824 11.949 20.761 0.500 34.260 0 288 HOH A O 1 ?
HETATM 425 O O . HOH C 3 . ? 2.148 21.949 18.612 1.000 43.467 0 289 HOH A O 1 ?
HETATM 426 O O . HOH C 3 . ? -4.162 9.195 -11.065 1.000 42.983 0 290 HOH A O 1 ?
HETATM 427 O O . HOH C 3 . ? 13.205 27.108 8.730 1.000 37.070 0 291 HOH A O 1 ?
HETATM 428 O O . HOH C 3 . ? 20.556 11.861 7.840 0.330 35.946 0 292 HOH A O 1 ?
HETATM 429 O O . HOH C 3 . ? 10.356 16.246 3.462 1.000 21.877 0 293 HOH A O 1 ?
HETATM 430 O O . HOH C 3 . ? 1.473 23.132 -23.060 1.000 42.000 0 294 HOH A O 1 ?
HETATM 431 O O . HOH C 3 . ? 9.794 27.147 -21.786 1.000 35.011 0 295 HOH A O 1 ?
HETATM 432 O O . HOH C 3 . ? -0.760 14.454 -19.372 1.000 29.931 0 296 HOH A O 1 ?
HETATM 433 O O . HOH C 3 . ? 8.600 20.147 5.005 1.000 37.721 0 297 HOH A O 1 ?
HETATM 434 O O . HOH C 3 . ? 1.939 15.856 8.460 1.000 39.993 0 298 HOH A O 1 ?
HETATM 435 O O . HOH C 3 . ? 9.898 13.082 -9.664 1.000 40.989 0 299 HOH A O 1 ?
HETATM 436 O O . HOH C 3 . ? 8.354 17.398 4.283 1.000 40.387 0 300 HOH A O 1 ?
HETATM 437 O O . HOH C 3 . ? 0.000 23.768 -25.089 0.330 37.214 0 301 HOH A O 1 ?
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