data_9GJ3
#
_entry.id 9GJ3
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.404
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 9GJ3 pdb_00009gj3 10.2210/pdb9gj3/pdb
WWPDB D_1292141093 ? ?
#
_pdbx_audit_revision_history.ordinal 1
_pdbx_audit_revision_history.data_content_type 'Structure model'
_pdbx_audit_revision_history.major_revision 1
_pdbx_audit_revision_history.minor_revision 0
_pdbx_audit_revision_history.revision_date 2025-07-09
_pdbx_audit_revision_history.part_number ?
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
_pdbx_database_status.status_code REL
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.entry_id 9GJ3
_pdbx_database_status.recvd_initial_deposition_date 2024-08-21
_pdbx_database_status.SG_entry N
_pdbx_database_status.deposit_site PDBE
_pdbx_database_status.process_site PDBE
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.pdb_format_compatible Y
#
_pdbx_contact_author.id 2
_pdbx_contact_author.email perczel.andras@ttk.elte.hu
_pdbx_contact_author.name_first Andras
_pdbx_contact_author.name_last Perczel
_pdbx_contact_author.name_mi ?
_pdbx_contact_author.role 'principal investigator/group leader'
_pdbx_contact_author.identifier_ORCID 0000-0003-1252-6416
#
_audit_author.name 'Durvanger, Z.'
_audit_author.pdbx_ordinal 1
_audit_author.identifier_ORCID 0000-0002-2652-4916
#
_citation.abstract ?
_citation.abstract_id_CAS ?
_citation.book_id_ISBN ?
_citation.book_publisher ?
_citation.book_publisher_city ?
_citation.book_title ?
_citation.coordinate_linkage ?
_citation.country GE
_citation.database_id_Medline ?
_citation.details ?
_citation.id primary
_citation.journal_abbrev Chemistry
_citation.journal_id_ASTM ?
_citation.journal_id_CSD ?
_citation.journal_id_ISSN 0947-6539
_citation.journal_full ?
_citation.journal_issue ?
_citation.journal_volume 31
_citation.language ?
_citation.page_first e202404669
_citation.page_last e202404669
_citation.title
'Chemical Evolution of Early Macromolecules: From Prebiotic Oligopeptides to Self-Organizing Biosystems via Amyloid Formation.'
_citation.year 2025
_citation.database_id_CSD ?
_citation.pdbx_database_id_DOI 10.1002/chem.202404669
_citation.pdbx_database_id_PubMed 40197673
_citation.pdbx_database_id_patent ?
_citation.unpublished_flag ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Bencs, F.' 1 0009-0003-9246-2228
primary 'Taricska, N.' 2 0000-0002-9721-953X
primary 'Durvanger, Z.' 3 0000-0002-2652-4916
primary 'Horvath, D.' 4 0000-0001-8239-3933
primary 'Fazekas, Z.' 5 0000-0001-5007-4807
primary 'Grolmusz, V.' 6 0000-0001-9456-8876
primary 'Farkas, V.' 7 0000-0002-8815-2783
primary 'Perczel, A.' 8 0000-0003-1252-6416
#
_entity.id 1
_entity.type polymer
_entity.src_method syn
_entity.pdbx_description 'Peptide LYIQNY'
_entity.formula_weight 812.910
_entity.pdbx_number_of_molecules 1
_entity.pdbx_ec ?
_entity.pdbx_mutation ?
_entity.pdbx_fragment ?
_entity.details ?
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code LYIQNY
_entity_poly.pdbx_seq_one_letter_code_can LYIQNY
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 LEU n
1 2 TYR n
1 3 ILE n
1 4 GLN n
1 5 ASN n
1 6 TYR n
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num 1
_pdbx_entity_src_syn.pdbx_end_seq_num 6
_pdbx_entity_src_syn.organism_scientific 'synthetic construct'
_pdbx_entity_src_syn.organism_common_name ?
_pdbx_entity_src_syn.ncbi_taxonomy_id 32630
_pdbx_entity_src_syn.details ?
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118
GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144
ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173
LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173
TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 LEU 1 1 1 LEU LEU A . n
A 1 2 TYR 2 2 2 TYR TYR A . n
A 1 3 ILE 3 3 3 ILE ILE A . n
A 1 4 GLN 4 4 4 GLN GLN A . n
A 1 5 ASN 5 5 5 ASN ASN A . n
A 1 6 TYR 6 6 6 TYR TYR A . n
#
loop_
_software.citation_id
_software.classification
_software.compiler_name
_software.compiler_version
_software.contact_author
_software.contact_author_email
_software.date
_software.description
_software.dependencies
_software.hardware
_software.language
_software.location
_software.mods
_software.name
_software.os
_software.os_version
_software.type
_software.version
_software.pdbx_ordinal
? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 1
? refinement ? ? ? ? ? ? ? ? ? ? ? BUSTER ? ? ? . 2
? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? CrysalisPro ? ? ? . 3
? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? CrysalisPro ? ? ? . 4
? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5
#
_cell.angle_alpha 90.000
_cell.angle_alpha_esd ?
_cell.angle_beta 90.000
_cell.angle_beta_esd ?
_cell.angle_gamma 90.000
_cell.angle_gamma_esd ?
_cell.entry_id 9GJ3
_cell.details ?
_cell.formula_units_Z ?
_cell.length_a 4.850
_cell.length_a_esd ?
_cell.length_b 20.538
_cell.length_b_esd ?
_cell.length_c 42.326
_cell.length_c_esd ?
_cell.volume 4216.063
_cell.volume_esd ?
_cell.Z_PDB 4
_cell.reciprocal_angle_alpha ?
_cell.reciprocal_angle_beta ?
_cell.reciprocal_angle_gamma ?
_cell.reciprocal_angle_alpha_esd ?
_cell.reciprocal_angle_beta_esd ?
_cell.reciprocal_angle_gamma_esd ?
_cell.reciprocal_length_a ?
_cell.reciprocal_length_b ?
_cell.reciprocal_length_c ?
_cell.reciprocal_length_a_esd ?
_cell.reciprocal_length_b_esd ?
_cell.reciprocal_length_c_esd ?
_cell.pdbx_unique_axis ?
_cell.pdbx_esd_method ?
#
_symmetry.entry_id 9GJ3
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 19
_symmetry.space_group_name_Hall 'P 2ac 2ab'
_symmetry.space_group_name_H-M 'P 21 21 21'
_symmetry.pdbx_full_space_group_name_H-M ?
#
_exptl.absorpt_coefficient_mu ?
_exptl.absorpt_correction_T_max ?
_exptl.absorpt_correction_T_min ?
_exptl.absorpt_correction_type ?
_exptl.absorpt_process_details ?
_exptl.entry_id 9GJ3
_exptl.crystals_number 1
_exptl.details ?
_exptl.method 'X-RAY DIFFRACTION'
_exptl.method_details ?
#
_exptl_crystal.colour ?
_exptl_crystal.density_diffrn ?
_exptl_crystal.density_Matthews ?
_exptl_crystal.density_method ?
_exptl_crystal.density_percent_sol ?
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.id 1
_exptl_crystal.preparation ?
_exptl_crystal.size_max ?
_exptl_crystal.size_mid ?
_exptl_crystal.size_min ?
_exptl_crystal.size_rad ?
_exptl_crystal.colour_lustre ?
_exptl_crystal.colour_modifier ?
_exptl_crystal.colour_primary ?
_exptl_crystal.density_meas ?
_exptl_crystal.density_meas_esd ?
_exptl_crystal.density_meas_gt ?
_exptl_crystal.density_meas_lt ?
_exptl_crystal.density_meas_temp ?
_exptl_crystal.density_meas_temp_esd ?
_exptl_crystal.density_meas_temp_gt ?
_exptl_crystal.density_meas_temp_lt ?
_exptl_crystal.pdbx_crystal_image_url ?
_exptl_crystal.pdbx_crystal_image_format ?
_exptl_crystal.pdbx_mosaicity ?
_exptl_crystal.pdbx_mosaicity_esd ?
_exptl_crystal.pdbx_mosaic_method ?
_exptl_crystal.pdbx_mosaic_block_size ?
_exptl_crystal.pdbx_mosaic_block_size_esd ?
#
_exptl_crystal_grow.apparatus ?
_exptl_crystal_grow.atmosphere ?
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.details ?
_exptl_crystal_grow.method 'EVAPORATION, RECRYSTALLIZATION'
_exptl_crystal_grow.method_ref ?
_exptl_crystal_grow.pH ?
_exptl_crystal_grow.pressure ?
_exptl_crystal_grow.pressure_esd ?
_exptl_crystal_grow.seeding ?
_exptl_crystal_grow.seeding_ref ?
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.temp_esd ?
_exptl_crystal_grow.time ?
_exptl_crystal_grow.pdbx_details 'water (containing 0.1% TFA), 310K'
_exptl_crystal_grow.pdbx_pH_range ?
_exptl_crystal_grow.temp 310
#
_diffrn.ambient_environment ?
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.ambient_temp_esd ?
_diffrn.crystal_id 1
_diffrn.crystal_support ?
_diffrn.crystal_treatment ?
_diffrn.details ?
_diffrn.id 1
_diffrn.ambient_pressure ?
_diffrn.ambient_pressure_esd ?
_diffrn.ambient_pressure_gt ?
_diffrn.ambient_pressure_lt ?
_diffrn.ambient_temp_gt ?
_diffrn.ambient_temp_lt ?
_diffrn.pdbx_serial_crystal_experiment N
#
_diffrn_detector.details ?
_diffrn_detector.detector PIXEL
_diffrn_detector.diffrn_id 1
_diffrn_detector.type 'RIGAKU HyPix-6000HE'
_diffrn_detector.area_resol_mean ?
_diffrn_detector.dtime ?
_diffrn_detector.pdbx_frames_total ?
_diffrn_detector.pdbx_collection_time_total ?
_diffrn_detector.pdbx_collection_date 2021-10-07
_diffrn_detector.pdbx_frequency ?
_diffrn_detector.id ?
_diffrn_detector.number_of_axes ?
#
_diffrn_radiation.collimation ?
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.filter_edge ?
_diffrn_radiation.inhomogeneity ?
_diffrn_radiation.monochromator ?
_diffrn_radiation.polarisn_norm ?
_diffrn_radiation.polarisn_ratio ?
_diffrn_radiation.probe ?
_diffrn_radiation.type ?
_diffrn_radiation.xray_symbol ?
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.pdbx_wavelength_list ?
_diffrn_radiation.pdbx_wavelength ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_analyzer ?
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 1.54184
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.current ?
_diffrn_source.details ?
_diffrn_source.diffrn_id 1
_diffrn_source.power ?
_diffrn_source.size ?
_diffrn_source.source 'ROTATING ANODE'
_diffrn_source.target ?
_diffrn_source.type 'RIGAKU PhotonJet-R'
_diffrn_source.voltage ?
_diffrn_source.take-off_angle ?
_diffrn_source.pdbx_wavelength_list 1.54184
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_synchrotron_beamline ?
_diffrn_source.pdbx_synchrotron_site ?
#
_reflns.B_iso_Wilson_estimate 7.26
_reflns.entry_id 9GJ3
_reflns.data_reduction_details ?
_reflns.data_reduction_method ?
_reflns.d_resolution_high 1.50
_reflns.d_resolution_low 21.17
_reflns.details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.number_all ?
_reflns.number_obs 849
_reflns.observed_criterion ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.observed_criterion_I_max ?
_reflns.observed_criterion_I_min ?
_reflns.observed_criterion_sigma_F ?
_reflns.observed_criterion_sigma_I ?
_reflns.percent_possible_obs 100
_reflns.R_free_details ?
_reflns.Rmerge_F_all ?
_reflns.Rmerge_F_obs ?
_reflns.Friedel_coverage ?
_reflns.number_gt ?
_reflns.threshold_expression ?
_reflns.pdbx_redundancy 4.49
_reflns.pdbx_netI_over_av_sigmaI ?
_reflns.pdbx_netI_over_sigmaI 8.4
_reflns.pdbx_res_netI_over_av_sigmaI_2 ?
_reflns.pdbx_res_netI_over_sigmaI_2 ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_d_res_high_opt ?
_reflns.pdbx_d_res_low_opt ?
_reflns.pdbx_d_res_opt_method ?
_reflns.phase_calculation_details ?
_reflns.pdbx_Rrim_I_all 0.120
_reflns.pdbx_Rpim_I_all ?
_reflns.pdbx_d_opt ?
_reflns.pdbx_number_measured_all ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
_reflns.pdbx_CC_half 0.995
_reflns.pdbx_CC_star ?
_reflns.pdbx_R_split ?
_reflns.pdbx_Rmerge_I_obs ?
_reflns.pdbx_Rmerge_I_all ?
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_CC_split_method ?
_reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ?
_reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ?
_reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ?
_reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ?
_reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ?
_reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ?
_reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ?
_reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ?
_reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ?
_reflns.pdbx_aniso_diffraction_limit_1 ?
_reflns.pdbx_aniso_diffraction_limit_2 ?
_reflns.pdbx_aniso_diffraction_limit_3 ?
_reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ?
_reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ?
_reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ?
_reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ?
_reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ?
_reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ?
_reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ?
_reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ?
_reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ?
_reflns.pdbx_aniso_B_tensor_eigenvalue_1 ?
_reflns.pdbx_aniso_B_tensor_eigenvalue_2 ?
_reflns.pdbx_aniso_B_tensor_eigenvalue_3 ?
_reflns.pdbx_orthogonalization_convention ?
_reflns.pdbx_percent_possible_ellipsoidal ?
_reflns.pdbx_percent_possible_spherical ?
_reflns.pdbx_percent_possible_ellipsoidal_anomalous ?
_reflns.pdbx_percent_possible_spherical_anomalous ?
_reflns.pdbx_redundancy_anomalous ?
_reflns.pdbx_CC_half_anomalous ?
_reflns.pdbx_absDiff_over_sigma_anomalous ?
_reflns.pdbx_percent_possible_anomalous ?
_reflns.pdbx_observed_signal_threshold ?
_reflns.pdbx_signal_type ?
_reflns.pdbx_signal_details ?
_reflns.pdbx_signal_software_id ?
#
_reflns_shell.d_res_high 1.50
_reflns_shell.d_res_low 1.55
_reflns_shell.meanI_over_sigI_all ?
_reflns_shell.meanI_over_sigI_obs 2.4
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_possible ?
_reflns_shell.number_unique_all ?
_reflns_shell.number_unique_obs 86
_reflns_shell.percent_possible_obs ?
_reflns_shell.Rmerge_F_all ?
_reflns_shell.Rmerge_F_obs ?
_reflns_shell.meanI_over_sigI_gt ?
_reflns_shell.meanI_over_uI_all ?
_reflns_shell.meanI_over_uI_gt ?
_reflns_shell.number_measured_gt ?
_reflns_shell.number_unique_gt ?
_reflns_shell.percent_possible_gt ?
_reflns_shell.Rmerge_F_gt ?
_reflns_shell.Rmerge_I_gt ?
_reflns_shell.pdbx_redundancy ?
_reflns_shell.pdbx_chi_squared ?
_reflns_shell.pdbx_netI_over_sigmaI_all ?
_reflns_shell.pdbx_netI_over_sigmaI_obs ?
_reflns_shell.pdbx_Rrim_I_all 0.432
_reflns_shell.pdbx_Rpim_I_all ?
_reflns_shell.pdbx_rejects ?
_reflns_shell.pdbx_ordinal 1
_reflns_shell.pdbx_diffrn_id 1
_reflns_shell.pdbx_CC_half 0.864
_reflns_shell.pdbx_CC_star ?
_reflns_shell.pdbx_R_split ?
_reflns_shell.percent_possible_all ?
_reflns_shell.Rmerge_I_all ?
_reflns_shell.Rmerge_I_obs ?
_reflns_shell.pdbx_Rsym_value ?
_reflns_shell.pdbx_percent_possible_ellipsoidal ?
_reflns_shell.pdbx_percent_possible_spherical ?
_reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ?
_reflns_shell.pdbx_percent_possible_spherical_anomalous ?
_reflns_shell.pdbx_redundancy_anomalous ?
_reflns_shell.pdbx_CC_half_anomalous ?
_reflns_shell.pdbx_absDiff_over_sigma_anomalous ?
_reflns_shell.pdbx_percent_possible_anomalous ?
#
_refine.aniso_B[1][1] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[2][3] ?
_refine.aniso_B[3][3] ?
_refine.B_iso_max ?
_refine.B_iso_mean 5.41
_refine.B_iso_min ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.details ?
_refine.diff_density_max ?
_refine.diff_density_max_esd ?
_refine.diff_density_min ?
_refine.diff_density_min_esd ?
_refine.diff_density_rms ?
_refine.diff_density_rms_esd ?
_refine.entry_id 9GJ3
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.ls_abs_structure_details ?
_refine.ls_abs_structure_Flack ?
_refine.ls_abs_structure_Flack_esd ?
_refine.ls_abs_structure_Rogers ?
_refine.ls_abs_structure_Rogers_esd ?
_refine.ls_d_res_high 1.50
_refine.ls_d_res_low 21.16
_refine.ls_extinction_coef ?
_refine.ls_extinction_coef_esd ?
_refine.ls_extinction_expression ?
_refine.ls_extinction_method ?
_refine.ls_goodness_of_fit_all ?
_refine.ls_goodness_of_fit_all_esd ?
_refine.ls_goodness_of_fit_obs ?
_refine.ls_goodness_of_fit_obs_esd ?
_refine.ls_hydrogen_treatment ?
_refine.ls_matrix_type ?
_refine.ls_number_constraints ?
_refine.ls_number_parameters ?
_refine.ls_number_reflns_all ?
_refine.ls_number_reflns_obs 849
_refine.ls_number_reflns_R_free 87
_refine.ls_number_reflns_R_work 762
_refine.ls_number_restraints ?
_refine.ls_percent_reflns_obs 100.00
_refine.ls_percent_reflns_R_free 10.25
_refine.ls_R_factor_all ?
_refine.ls_R_factor_obs 0.1014
_refine.ls_R_factor_R_free 0.1097
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_R_factor_R_work 0.1004
_refine.ls_R_Fsqd_factor_obs ?
_refine.ls_R_I_factor_obs ?
_refine.ls_redundancy_reflns_all ?
_refine.ls_redundancy_reflns_obs ?
_refine.ls_restrained_S_all ?
_refine.ls_restrained_S_obs ?
_refine.ls_shift_over_esd_max ?
_refine.ls_shift_over_esd_mean ?
_refine.ls_structure_factor_coef ?
_refine.ls_weighting_details ?
_refine.ls_weighting_scheme ?
_refine.ls_wR_factor_all ?
_refine.ls_wR_factor_obs ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.occupancy_max ?
_refine.occupancy_min ?
_refine.solvent_model_details 'FLAT BULK SOLVENT MODEL'
_refine.solvent_model_param_bsol ?
_refine.solvent_model_param_ksol ?
_refine.pdbx_R_complete ?
_refine.ls_R_factor_gt ?
_refine.ls_goodness_of_fit_gt ?
_refine.ls_goodness_of_fit_ref ?
_refine.ls_shift_over_su_max ?
_refine.ls_shift_over_su_max_lt ?
_refine.ls_shift_over_su_mean ?
_refine.ls_shift_over_su_mean_lt ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 1.36
_refine.pdbx_ls_sigma_Fsqd ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_ls_cross_valid_method 'FREE R-VALUE'
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_starting_model ?
_refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2'
_refine.pdbx_R_Free_selection_details ?
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.pdbx_solvent_vdw_probe_radii 1.1100
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii 0.9000
_refine.pdbx_real_space_R ?
_refine.pdbx_density_correlation ?
_refine.pdbx_pd_number_of_powder_patterns ?
_refine.pdbx_pd_number_of_points ?
_refine.pdbx_pd_meas_number_of_points ?
_refine.pdbx_pd_proc_ls_prof_R_factor ?
_refine.pdbx_pd_proc_ls_prof_wR_factor ?
_refine.pdbx_pd_Marquardt_correlation_coeff ?
_refine.pdbx_pd_Fsqrd_R_factor ?
_refine.pdbx_pd_ls_matrix_band_width ?
_refine.pdbx_overall_phase_error 5.7338
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_diffrn_id 1
_refine.overall_SU_B ?
_refine.overall_SU_ML 0.0000
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_average_fsc_overall ?
_refine.pdbx_average_fsc_work ?
_refine.pdbx_average_fsc_free ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.details ?
_refine_hist.d_res_high 1.50
_refine_hist.d_res_low 21.16
_refine_hist.number_atoms_solvent 0
_refine_hist.number_atoms_total 58
_refine_hist.number_reflns_all ?
_refine_hist.number_reflns_obs ?
_refine_hist.number_reflns_R_free ?
_refine_hist.number_reflns_R_work ?
_refine_hist.R_factor_all ?
_refine_hist.R_factor_obs ?
_refine_hist.R_factor_R_free ?
_refine_hist.R_factor_R_work ?
_refine_hist.pdbx_number_residues_total ?
_refine_hist.pdbx_B_iso_mean_ligand ?
_refine_hist.pdbx_B_iso_mean_solvent ?
_refine_hist.pdbx_number_atoms_protein 58
_refine_hist.pdbx_number_atoms_nucleic_acid 0
_refine_hist.pdbx_number_atoms_ligand 0
_refine_hist.pdbx_number_atoms_lipid ?
_refine_hist.pdbx_number_atoms_carb ?
_refine_hist.pdbx_pseudo_atom_details ?
#
loop_
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.criterion
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.number
_refine_ls_restr.rejects
_refine_ls_restr.type
_refine_ls_restr.weight
_refine_ls_restr.pdbx_restraint_function
'X-RAY DIFFRACTION' ? 0.0120 ? 59 ? f_bond_d ? ?
'X-RAY DIFFRACTION' ? 1.3870 ? 80 ? f_angle_d ? ?
'X-RAY DIFFRACTION' ? 0.0800 ? 8 ? f_chiral_restr ? ?
'X-RAY DIFFRACTION' ? 0.0098 ? 10 ? f_plane_restr ? ?
'X-RAY DIFFRACTION' ? 16.4419 ? 21 ? f_dihedral_angle_d ? ?
#
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_ls_shell.d_res_high 1.50
_refine_ls_shell.d_res_low 21.16
_refine_ls_shell.number_reflns_all ?
_refine_ls_shell.number_reflns_obs ?
_refine_ls_shell.number_reflns_R_free 87
_refine_ls_shell.number_reflns_R_work 762
_refine_ls_shell.percent_reflns_obs 100.00
_refine_ls_shell.percent_reflns_R_free ?
_refine_ls_shell.R_factor_all ?
_refine_ls_shell.R_factor_obs ?
_refine_ls_shell.R_factor_R_free_error ?
_refine_ls_shell.R_factor_R_work 0.1004
_refine_ls_shell.redundancy_reflns_all ?
_refine_ls_shell.redundancy_reflns_obs ?
_refine_ls_shell.wR_factor_all ?
_refine_ls_shell.wR_factor_obs ?
_refine_ls_shell.wR_factor_R_free ?
_refine_ls_shell.wR_factor_R_work ?
_refine_ls_shell.pdbx_R_complete ?
_refine_ls_shell.pdbx_total_number_of_bins_used ?
_refine_ls_shell.pdbx_phase_error ?
_refine_ls_shell.pdbx_fsc_work ?
_refine_ls_shell.pdbx_fsc_free ?
_refine_ls_shell.R_factor_R_free 0.1097
#
_struct.entry_id 9GJ3
_struct.title 'Structure of the amyloid-forming peptide LYIQNY'
_struct.pdbx_model_details ?
_struct.pdbx_formula_weight ?
_struct.pdbx_formula_weight_method ?
_struct.pdbx_model_type_details ?
_struct.pdbx_CASP_flag N
#
_struct_keywords.entry_id 9GJ3
_struct_keywords.text 'amyloid, PROTEIN FIBRIL'
_struct_keywords.pdbx_keywords 'PROTEIN FIBRIL'
#
_struct_asym.id A
_struct_asym.pdbx_blank_PDB_chainid_flag N
_struct_asym.pdbx_modified N
_struct_asym.entity_id 1
_struct_asym.details ?
#
_struct_ref.id 1
_struct_ref.db_name PDB
_struct_ref.db_code 9GJ3
_struct_ref.pdbx_db_accession 9GJ3
_struct_ref.pdbx_db_isoform ?
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_align_begin 1
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 9GJ3
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 6
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession 9GJ3
_struct_ref_seq.db_align_beg 1
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 6
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 6
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details monomeric
_pdbx_struct_assembly.oligomeric_count 1
#
loop_
_pdbx_struct_assembly_prop.biol_id
_pdbx_struct_assembly_prop.type
_pdbx_struct_assembly_prop.value
_pdbx_struct_assembly_prop.details
1 'ABSA (A^2)' 0 ?
1 MORE 0 ?
1 'SSA (A^2)' 1040 ?
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A
#
_pdbx_struct_assembly_auth_evidence.id 1
_pdbx_struct_assembly_auth_evidence.assembly_id 1
_pdbx_struct_assembly_auth_evidence.experimental_support none
_pdbx_struct_assembly_auth_evidence.details ?
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
_pdbx_entry_details.entry_id 9GJ3
_pdbx_entry_details.compound_details ?
_pdbx_entry_details.source_details ?
_pdbx_entry_details.nonpolymer_details ?
_pdbx_entry_details.sequence_details ?
_pdbx_entry_details.has_ligand_of_interest ?
_pdbx_entry_details.has_protein_modification N
#
loop_
_space_group_symop.id
_space_group_symop.operation_xyz
1 x,y,z
2 x+1/2,-y+1/2,-z
3 -x,y+1/2,-z+1/2
4 -x+1/2,-y,z+1/2
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
ASN N N N N 1
ASN CA C N S 2
ASN C C N N 3
ASN O O N N 4
ASN CB C N N 5
ASN CG C N N 6
ASN OD1 O N N 7
ASN ND2 N N N 8
ASN OXT O N N 9
ASN H H N N 10
ASN H2 H N N 11
ASN HA H N N 12
ASN HB2 H N N 13
ASN HB3 H N N 14
ASN HD21 H N N 15
ASN HD22 H N N 16
ASN HXT H N N 17
GLN N N N N 18
GLN CA C N S 19
GLN C C N N 20
GLN O O N N 21
GLN CB C N N 22
GLN CG C N N 23
GLN CD C N N 24
GLN OE1 O N N 25
GLN NE2 N N N 26
GLN OXT O N N 27
GLN H H N N 28
GLN H2 H N N 29
GLN HA H N N 30
GLN HB2 H N N 31
GLN HB3 H N N 32
GLN HG2 H N N 33
GLN HG3 H N N 34
GLN HE21 H N N 35
GLN HE22 H N N 36
GLN HXT H N N 37
ILE N N N N 38
ILE CA C N S 39
ILE C C N N 40
ILE O O N N 41
ILE CB C N S 42
ILE CG1 C N N 43
ILE CG2 C N N 44
ILE CD1 C N N 45
ILE OXT O N N 46
ILE H H N N 47
ILE H2 H N N 48
ILE HA H N N 49
ILE HB H N N 50
ILE HG12 H N N 51
ILE HG13 H N N 52
ILE HG21 H N N 53
ILE HG22 H N N 54
ILE HG23 H N N 55
ILE HD11 H N N 56
ILE HD12 H N N 57
ILE HD13 H N N 58
ILE HXT H N N 59
LEU N N N N 60
LEU CA C N S 61
LEU C C N N 62
LEU O O N N 63
LEU CB C N N 64
LEU CG C N N 65
LEU CD1 C N N 66
LEU CD2 C N N 67
LEU OXT O N N 68
LEU H H N N 69
LEU H2 H N N 70
LEU HA H N N 71
LEU HB2 H N N 72
LEU HB3 H N N 73
LEU HG H N N 74
LEU HD11 H N N 75
LEU HD12 H N N 76
LEU HD13 H N N 77
LEU HD21 H N N 78
LEU HD22 H N N 79
LEU HD23 H N N 80
LEU HXT H N N 81
TYR N N N N 82
TYR CA C N S 83
TYR C C N N 84
TYR O O N N 85
TYR CB C N N 86
TYR CG C Y N 87
TYR CD1 C Y N 88
TYR CD2 C Y N 89
TYR CE1 C Y N 90
TYR CE2 C Y N 91
TYR CZ C Y N 92
TYR OH O N N 93
TYR OXT O N N 94
TYR H H N N 95
TYR H2 H N N 96
TYR HA H N N 97
TYR HB2 H N N 98
TYR HB3 H N N 99
TYR HD1 H N N 100
TYR HD2 H N N 101
TYR HE1 H N N 102
TYR HE2 H N N 103
TYR HH H N N 104
TYR HXT H N N 105
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ASN N CA sing N N 1
ASN N H sing N N 2
ASN N H2 sing N N 3
ASN CA C sing N N 4
ASN CA CB sing N N 5
ASN CA HA sing N N 6
ASN C O doub N N 7
ASN C OXT sing N N 8
ASN CB CG sing N N 9
ASN CB HB2 sing N N 10
ASN CB HB3 sing N N 11
ASN CG OD1 doub N N 12
ASN CG ND2 sing N N 13
ASN ND2 HD21 sing N N 14
ASN ND2 HD22 sing N N 15
ASN OXT HXT sing N N 16
GLN N CA sing N N 17
GLN N H sing N N 18
GLN N H2 sing N N 19
GLN CA C sing N N 20
GLN CA CB sing N N 21
GLN CA HA sing N N 22
GLN C O doub N N 23
GLN C OXT sing N N 24
GLN CB CG sing N N 25
GLN CB HB2 sing N N 26
GLN CB HB3 sing N N 27
GLN CG CD sing N N 28
GLN CG HG2 sing N N 29
GLN CG HG3 sing N N 30
GLN CD OE1 doub N N 31
GLN CD NE2 sing N N 32
GLN NE2 HE21 sing N N 33
GLN NE2 HE22 sing N N 34
GLN OXT HXT sing N N 35
ILE N CA sing N N 36
ILE N H sing N N 37
ILE N H2 sing N N 38
ILE CA C sing N N 39
ILE CA CB sing N N 40
ILE CA HA sing N N 41
ILE C O doub N N 42
ILE C OXT sing N N 43
ILE CB CG1 sing N N 44
ILE CB CG2 sing N N 45
ILE CB HB sing N N 46
ILE CG1 CD1 sing N N 47
ILE CG1 HG12 sing N N 48
ILE CG1 HG13 sing N N 49
ILE CG2 HG21 sing N N 50
ILE CG2 HG22 sing N N 51
ILE CG2 HG23 sing N N 52
ILE CD1 HD11 sing N N 53
ILE CD1 HD12 sing N N 54
ILE CD1 HD13 sing N N 55
ILE OXT HXT sing N N 56
LEU N CA sing N N 57
LEU N H sing N N 58
LEU N H2 sing N N 59
LEU CA C sing N N 60
LEU CA CB sing N N 61
LEU CA HA sing N N 62
LEU C O doub N N 63
LEU C OXT sing N N 64
LEU CB CG sing N N 65
LEU CB HB2 sing N N 66
LEU CB HB3 sing N N 67
LEU CG CD1 sing N N 68
LEU CG CD2 sing N N 69
LEU CG HG sing N N 70
LEU CD1 HD11 sing N N 71
LEU CD1 HD12 sing N N 72
LEU CD1 HD13 sing N N 73
LEU CD2 HD21 sing N N 74
LEU CD2 HD22 sing N N 75
LEU CD2 HD23 sing N N 76
LEU OXT HXT sing N N 77
TYR N CA sing N N 78
TYR N H sing N N 79
TYR N H2 sing N N 80
TYR CA C sing N N 81
TYR CA CB sing N N 82
TYR CA HA sing N N 83
TYR C O doub N N 84
TYR C OXT sing N N 85
TYR CB CG sing N N 86
TYR CB HB2 sing N N 87
TYR CB HB3 sing N N 88
TYR CG CD1 doub Y N 89
TYR CG CD2 sing Y N 90
TYR CD1 CE1 sing Y N 91
TYR CD1 HD1 sing N N 92
TYR CD2 CE2 doub Y N 93
TYR CD2 HD2 sing N N 94
TYR CE1 CZ doub Y N 95
TYR CE1 HE1 sing N N 96
TYR CE2 CZ sing Y N 97
TYR CE2 HE2 sing N N 98
TYR CZ OH sing N N 99
TYR OH HH sing N N 100
TYR OXT HXT sing N N 101
#
loop_
_pdbx_audit_support.funding_organization
_pdbx_audit_support.country
_pdbx_audit_support.grant_number
_pdbx_audit_support.ordinal
'Hungarian National Research, Development and Innovation Office' Hungary 2018-1.2.1-NKP-2018-00005 1
'European Regional Development Fund' 'European Union'
'VEKOP-2.3.2-16-2017-00014, VEKOP-2.3.3-15-2017-00018' 2
'Hungarian National Research, Development and Innovation Office' Hungary 'Thematic Excellence Program Synth+' 3
#
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'in silico model'
_pdbx_initial_refinement_model.source_name Other
_pdbx_initial_refinement_model.accession_code ?
_pdbx_initial_refinement_model.details 'ideal 5 residue beta strand'
#
_space_group.name_H-M_alt 'P 21 21 21'
_space_group.name_Hall 'P 2ac 2ab'
_space_group.IT_number 19
_space_group.crystal_system orthorhombic
_space_group.id 1
#
_atom_sites.entry_id 9GJ3
_atom_sites.Cartn_transf_matrix[1][1] ?
_atom_sites.Cartn_transf_matrix[1][2] ?
_atom_sites.Cartn_transf_matrix[1][3] ?
_atom_sites.Cartn_transf_matrix[2][1] ?
_atom_sites.Cartn_transf_matrix[2][2] ?
_atom_sites.Cartn_transf_matrix[2][3] ?
_atom_sites.Cartn_transf_matrix[3][1] ?
_atom_sites.Cartn_transf_matrix[3][2] ?
_atom_sites.Cartn_transf_matrix[3][3] ?
_atom_sites.Cartn_transf_vector[1] ?
_atom_sites.Cartn_transf_vector[2] ?
_atom_sites.Cartn_transf_vector[3] ?
_atom_sites.Cartn_transform_axes ?
_atom_sites.fract_transf_matrix[1][1] 0.206186
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.048690
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.023626
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
_atom_sites.solution_primary ?
_atom_sites.solution_secondary ?
_atom_sites.solution_hydrogens ?
_atom_sites.special_details ?
#
loop_
_atom_type.symbol
_atom_type.scat_dispersion_real
_atom_type.scat_dispersion_imag
_atom_type.scat_Cromer_Mann_a1
_atom_type.scat_Cromer_Mann_a2
_atom_type.scat_Cromer_Mann_a3
_atom_type.scat_Cromer_Mann_a4
_atom_type.scat_Cromer_Mann_b1
_atom_type.scat_Cromer_Mann_b2
_atom_type.scat_Cromer_Mann_b3
_atom_type.scat_Cromer_Mann_b4
_atom_type.scat_Cromer_Mann_c
_atom_type.scat_source
_atom_type.scat_dispersion_source
C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0
;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31.
;
?
H ? ? 0.51345 0.48472 ? ? 24.73122 6.32584 ? ? 0.0
;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31.
;
?
N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0
;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31.
;
?
O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0
;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31.
;
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loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 N N . LEU A 1 1 ? 0.38321 0.19541 -3.44539 1.000 8.60202 ? 1 LEU A N 1
ATOM 2 C CA . LEU A 1 1 ? 0.20616 -0.49868 -2.14361 1.000 6.60660 ? 1 LEU A CA 1
ATOM 3 C C . LEU A 1 1 ? 0.94551 0.30236 -1.05887 1.000 5.37775 ? 1 LEU A C 1
ATOM 4 O O . LEU A 1 1 ? 2.15189 0.50962 -1.11363 1.000 4.85309 ? 1 LEU A O 1
ATOM 5 C CB . LEU A 1 1 ? 0.70453 -1.93256 -2.25659 1.000 8.34007 ? 1 LEU A CB 1
ATOM 6 C CG . LEU A 1 1 ? 0.14593 -2.94086 -1.26915 1.000 16.61737 ? 1 LEU A CG 1
ATOM 7 C CD1 . LEU A 1 1 ? 0.54954 -4.33358 -1.70638 1.000 18.61049 ? 1 LEU A CD1 1
ATOM 8 C CD2 . LEU A 1 1 ? 0.70601 -2.66381 0.06036 1.000 17.25893 ? 1 LEU A CD2 1
ATOM 9 H H1 . LEU A 1 1 ? 0.81493 -0.33967 -4.01056 1.000 10.32735 ? 1 LEU A H1 1
ATOM 10 H H2 . LEU A 1 1 ? -0.41424 0.40157 -3.78252 1.000 10.32735 ? 1 LEU A H2 1
ATOM 11 H H3 . LEU A 1 1 ? 0.85500 0.94005 -3.32279 1.000 10.32735 ? 1 LEU A H3 1
ATOM 12 H HA . LEU A 1 1 ? -0.72649 -0.55824 -1.88377 1.000 7.93285 ? 1 LEU A HA 1
ATOM 13 H HB2 . LEU A 1 1 ? 0.48405 -2.25527 -3.14436 1.000 10.01301 ? 1 LEU A HB2 1
ATOM 14 H HB3 . LEU A 1 1 ? 1.66701 -1.92354 -2.13641 1.000 10.01301 ? 1 LEU A HB3 1
ATOM 15 H HG . LEU A 1 1 ? -0.82162 -2.88400 -1.23038 1.000 19.94577 ? 1 LEU A HG 1
ATOM 16 H HD11 . LEU A 1 1 ? 0.20014 -4.97775 -1.07088 1.000 22.33753 ? 1 LEU A HD11 1
ATOM 17 H HD12 . LEU A 1 1 ? 0.18331 -4.50641 -2.58780 1.000 22.33753 ? 1 LEU A HD12 1
ATOM 18 H HD13 . LEU A 1 1 ? 1.51763 -4.38779 -1.73397 1.000 22.33753 ? 1 LEU A HD13 1
ATOM 19 H HD21 . LEU A 1 1 ? 0.57459 -3.44042 0.62649 1.000 20.71565 ? 1 LEU A HD21 1
ATOM 20 H HD22 . LEU A 1 1 ? 1.65347 -2.47609 -0.02895 1.000 20.71565 ? 1 LEU A HD22 1
ATOM 21 H HD23 . LEU A 1 1 ? 0.25117 -1.89624 0.44096 1.000 20.71565 ? 1 LEU A HD23 1
ATOM 22 N N . TYR A 1 2 ? 0.18198 0.76845 -0.07409 1.000 4.28907 ? 2 TYR A N 1
ATOM 23 C CA . TYR A 1 2 ? 0.68515 1.57955 1.02977 1.000 3.08646 ? 2 TYR A CA 1
ATOM 24 C C . TYR A 1 2 ? 0.06607 1.03308 2.30265 1.000 5.24875 ? 2 TYR A C 1
ATOM 25 O O . TYR A 1 2 ? -1.16546 0.93600 2.39741 1.000 3.56655 ? 2 TYR A O 1
ATOM 26 C CB . TYR A 1 2 ? 0.26533 3.03727 0.86590 1.000 3.34119 ? 2 TYR A CB 1
ATOM 27 C CG . TYR A 1 2 ? 0.94738 4.11554 1.66530 1.000 2.14856 ? 2 TYR A CG 1
ATOM 28 C CD1 . TYR A 1 2 ? 1.96513 3.84893 2.55323 1.000 2.57985 ? 2 TYR A CD1 1
ATOM 29 C CD2 . TYR A 1 2 ? 0.55644 5.42692 1.50727 1.000 3.28148 ? 2 TYR A CD2 1
ATOM 30 C CE1 . TYR A 1 2 ? 2.60203 4.88185 3.24862 1.000 4.14927 ? 2 TYR A CE1 1
ATOM 31 C CE2 . TYR A 1 2 ? 1.19746 6.46424 2.17190 1.000 2.89787 ? 2 TYR A CE2 1
ATOM 32 C CZ . TYR A 1 2 ? 2.19864 6.19231 3.04826 1.000 2.78734 ? 2 TYR A CZ 1
ATOM 33 O OH . TYR A 1 2 ? 2.87007 7.22154 3.68213 1.000 6.15920 ? 2 TYR A OH 1
ATOM 34 H H . TYR A 1 2 ? -0.66389 0.62246 -0.02130 1.000 5.15182 ? 2 TYR A H 1
ATOM 35 H HA . TYR A 1 2 ? 1.65301 1.53339 1.07458 1.000 3.70869 ? 2 TYR A HA 1
ATOM 36 H HB2 . TYR A 1 2 ? 0.39723 3.27052 -0.06635 1.000 4.01436 ? 2 TYR A HB2 1
ATOM 37 H HB3 . TYR A 1 2 ? -0.67655 3.09142 1.09138 1.000 4.01436 ? 2 TYR A HB3 1
ATOM 38 H HD1 . TYR A 1 2 ? 2.23301 2.96932 2.69266 1.000 3.10075 ? 2 TYR A HD1 1
ATOM 39 H HD2 . TYR A 1 2 ? -0.15491 5.62262 0.94106 1.000 3.94271 ? 2 TYR A HD2 1
ATOM 40 H HE1 . TYR A 1 2 ? 3.29212 4.69034 3.84191 1.000 4.98405 ? 2 TYR A HE1 1
ATOM 41 H HE2 . TYR A 1 2 ? 0.94124 7.34472 2.01691 1.000 3.48238 ? 2 TYR A HE2 1
ATOM 42 H HH . TYR A 1 2 ? 2.41456 7.92643 3.64680 1.000 7.39597 ? 2 TYR A HH 1
ATOM 43 N N . ILE A 1 3 ? 0.89679 0.67733 3.27219 1.000 3.90442 ? 3 ILE A N 1
ATOM 44 C CA . ILE A 1 3 ? 0.43902 0.25661 4.59627 1.000 2.40421 ? 3 ILE A CA 1
ATOM 45 C C . ILE A 1 3 ? 1.02051 1.20820 5.61990 1.000 3.15324 ? 3 ILE A C 1
ATOM 46 O O . ILE A 1 3 ? 2.24628 1.36915 5.69318 1.000 3.14933 ? 3 ILE A O 1
ATOM 47 C CB . ILE A 1 3 ? 0.85642 -1.18381 4.93752 1.000 1.79646 ? 3 ILE A CB 1
ATOM 48 C CG1 . ILE A 1 3 ? 0.22049 -2.16578 3.95778 1.000 5.17748 ? 3 ILE A CG1 1
ATOM 49 C CG2 . ILE A 1 3 ? 0.43665 -1.53656 6.38377 1.000 3.98227 ? 3 ILE A CG2 1
ATOM 50 C CD1 . ILE A 1 3 ? 0.81547 -3.56734 4.04157 1.000 7.24622 ? 3 ILE A CD1 1
ATOM 51 H H . ILE A 1 3 ? 1.75265 0.67021 3.18818 1.000 4.69024 ? 3 ILE A H 1
ATOM 52 H HA . ILE A 1 3 ? -0.52912 0.31410 4.61365 1.000 2.88999 ? 3 ILE A HA 1
ATOM 53 H HB . ILE A 1 3 ? 1.82161 -1.24662 4.86427 1.000 2.16069 ? 3 ILE A HB 1
ATOM 54 H HG12 . ILE A 1 3 ? -0.72786 -2.23206 4.15050 1.000 6.21791 ? 3 ILE A HG12 1
ATOM 55 H HG13 . ILE A 1 3 ? 0.35336 -1.83859 3.05434 1.000 6.21791 ? 3 ILE A HG13 1
ATOM 56 H HG21 . ILE A 1 3 ? 0.50061 -2.49672 6.50587 1.000 4.78365 ? 3 ILE A HG21 1
ATOM 57 H HG22 . ILE A 1 3 ? 1.02950 -1.08402 7.00395 1.000 4.78365 ? 3 ILE A HG22 1
ATOM 58 H HG23 . ILE A 1 3 ? -0.47729 -1.24501 6.52734 1.000 4.78365 ? 3 ILE A HG23 1
ATOM 59 H HD11 . ILE A 1 3 ? 0.59682 -4.05225 3.23042 1.000 8.70040 ? 3 ILE A HD11 1
ATOM 60 H HD12 . ILE A 1 3 ? 1.77834 -3.49658 4.13528 1.000 8.70040 ? 3 ILE A HD12 1
ATOM 61 H HD13 . ILE A 1 3 ? 0.44090 -4.02395 4.81105 1.000 8.70040 ? 3 ILE A HD13 1
ATOM 62 N N . GLN A 1 4 ? 0.16174 1.81702 6.43784 1.000 2.91973 ? 4 GLN A N 1
ATOM 63 C CA . GLN A 1 4 ? 0.57524 2.59406 7.60234 1.000 2.06873 ? 4 GLN A CA 1
ATOM 64 C C . GLN A 1 4 ? -0.03138 1.90016 8.81600 1.000 3.78353 ? 4 GLN A C 1
ATOM 65 O O . GLN A 1 4 ? -1.26171 1.83894 8.94844 1.000 5.17695 ? 4 GLN A O 1
ATOM 66 C CB . GLN A 1 4 ? 0.13413 4.05347 7.51278 1.000 3.80705 ? 4 GLN A CB 1
ATOM 67 C CG . GLN A 1 4 ? 0.79116 4.74800 6.32127 1.000 2.42742 ? 4 GLN A CG 1
ATOM 68 C CD . GLN A 1 4 ? 0.41895 6.21715 6.18293 1.000 5.23381 ? 4 GLN A CD 1
ATOM 69 O OE1 . GLN A 1 4 ? 1.27621 7.11792 6.20211 1.000 8.54211 ? 4 GLN A OE1 1
ATOM 70 N NE2 . GLN A 1 4 ? -0.84677 6.46434 6.02528 1.000 2.91560 ? 4 GLN A NE2 1
ATOM 71 H H . GLN A 1 4 ? -0.69159 1.79237 6.33380 1.000 3.50861 ? 4 GLN A H 1
ATOM 72 H HA . GLN A 1 4 ? 1.54270 2.60109 7.67211 1.000 2.48741 ? 4 GLN A HA 1
ATOM 73 H HB2 . GLN A 1 4 ? -0.82854 4.09360 7.40074 1.000 4.57339 ? 4 GLN A HB2 1
ATOM 74 H HB3 . GLN A 1 4 ? 0.39355 4.51957 8.32294 1.000 4.57339 ? 4 GLN A HB3 1
ATOM 75 H HG2 . GLN A 1 4 ? 1.75448 4.69575 6.42222 1.000 2.91784 ? 4 GLN A HG2 1
ATOM 76 H HG3 . GLN A 1 4 ? 0.51789 4.29633 5.50750 1.000 2.91784 ? 4 GLN A HG3 1
ATOM 77 H HE21 . GLN A 1 4 ? -1.41211 5.81660 6.00480 1.000 3.50366 ? 4 GLN A HE21 1
ATOM 78 H HE22 . GLN A 1 4 ? -1.11925 7.27571 5.94141 1.000 3.50366 ? 4 GLN A HE22 1
ATOM 79 N N . ASN A 1 5 ? 0.82423 1.36483 9.68577 1.000 2.88173 ? 5 ASN A N 1
ATOM 80 C CA . ASN A 1 5 ? 0.40385 0.49879 10.77903 1.000 2.53504 ? 5 ASN A CA 1
ATOM 81 C C . ASN A 1 5 ? 0.84650 1.05522 12.12342 1.000 4.76526 ? 5 ASN A C 1
ATOM 82 O O . ASN A 1 5 ? 2.02798 1.34742 12.34059 1.000 5.54853 ? 5 ASN A O 1
ATOM 83 C CB . ASN A 1 5 ? 0.97548 -0.89896 10.59449 1.000 4.65647 ? 5 ASN A CB 1
ATOM 84 C CG . ASN A 1 5 ? 0.53970 -1.83574 11.66740 1.000 7.08245 ? 5 ASN A CG 1
ATOM 85 O OD1 . ASN A 1 5 ? -0.58616 -2.29076 11.68706 1.000 5.77765 ? 5 ASN A OD1 1
ATOM 86 N ND2 . ASN A 1 5 ? 1.44070 -2.10451 12.59785 1.000 8.88110 ? 5 ASN A ND2 1
ATOM 87 H H . ASN A 1 5 ? 1.67410 1.49388 9.65977 1.000 3.46301 ? 5 ASN A H 1
ATOM 88 H HA . ASN A 1 5 ? -0.56545 0.46315 10.78802 1.000 3.04698 ? 5 ASN A HA 1
ATOM 89 H HB2 . ASN A 1 5 ? 0.67580 -1.25483 9.74335 1.000 5.59269 ? 5 ASN A HB2 1
ATOM 90 H HB3 . ASN A 1 5 ? 1.94414 -0.85072 10.61136 1.000 5.59269 ? 5 ASN A HB3 1
ATOM 91 H HD21 . ASN A 1 5 ? 1.24637 -2.63900 13.24296 1.000 10.66225 ? 5 ASN A HD21 1
ATOM 92 H HD22 . ASN A 1 5 ? 2.22081 -1.74476 12.55767 1.000 10.66225 ? 5 ASN A HD22 1
ATOM 93 N N . TYR A 1 6 ? -0.11919 1.19889 13.02008 1.000 3.88663 ? 6 TYR A N 1
ATOM 94 C CA . TYR A 1 6 ? 0.11160 1.58428 14.39713 1.000 3.43751 ? 6 TYR A CA 1
ATOM 95 C C . TYR A 1 6 ? -0.54172 0.56019 15.32736 1.000 8.01901 ? 6 TYR A C 1
ATOM 96 O O . TYR A 1 6 ? -1.33071 -0.31119 14.90222 1.000 9.70451 ? 6 TYR A O 1
ATOM 97 C CB . TYR A 1 6 ? -0.48524 2.96349 14.69447 1.000 5.05545 ? 6 TYR A CB 1
ATOM 98 C CG . TYR A 1 6 ? 0.10203 4.10465 13.91320 1.000 3.88241 ? 6 TYR A CG 1
ATOM 99 C CD1 . TYR A 1 6 ? -0.36444 4.41697 12.64113 1.000 4.41264 ? 6 TYR A CD1 1
ATOM 100 C CD2 . TYR A 1 6 ? 1.09883 4.87978 14.45070 1.000 3.63340 ? 6 TYR A CD2 1
ATOM 101 C CE1 . TYR A 1 6 ? 0.17163 5.46787 11.91819 1.000 4.92063 ? 6 TYR A CE1 1
ATOM 102 C CE2 . TYR A 1 6 ? 1.65587 5.92328 13.72951 1.000 5.87501 ? 6 TYR A CE2 1
ATOM 103 C CZ . TYR A 1 6 ? 1.18183 6.22234 12.47401 1.000 3.96826 ? 6 TYR A CZ 1
ATOM 104 O OH . TYR A 1 6 ? 1.76339 7.29248 11.81552 1.000 7.66493 ? 6 TYR A OH 1
ATOM 105 O OXT . TYR A 1 6 ? -0.32801 0.66525 16.53639 1.000 9.61915 ? 6 TYR A OXT 1
ATOM 106 H H . TYR A 1 6 ? -0.95172 1.07275 12.84522 1.000 4.66889 ? 6 TYR A H 1
ATOM 107 H HA . TYR A 1 6 ? 1.06709 1.62817 14.55844 1.000 4.12994 ? 6 TYR A HA 1
ATOM 108 H HB2 . TYR A 1 6 ? -1.43398 2.93487 14.49452 1.000 6.07148 ? 6 TYR A HB2 1
ATOM 109 H HB3 . TYR A 1 6 ? -0.35016 3.15799 15.63512 1.000 6.07148 ? 6 TYR A HB3 1
ATOM 110 H HD1 . TYR A 1 6 ? -1.04966 3.90996 12.26921 1.000 5.30010 ? 6 TYR A HD1 1
ATOM 111 H HD2 . TYR A 1 6 ? 1.40458 4.70213 15.31085 1.000 4.36501 ? 6 TYR A HD2 1
ATOM 112 H HE1 . TYR A 1 6 ? -0.14643 5.66292 11.06631 1.000 5.90968 ? 6 TYR A HE1 1
ATOM 113 H HE2 . TYR A 1 6 ? 2.35083 6.42177 14.09481 1.000 7.05495 ? 6 TYR A HE2 1
ATOM 114 H HH . TYR A 1 6 ? 1.55749 7.27508 11.00133 1.000 9.20284 ? 6 TYR A HH 1
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