data_8F5C
#
_entry.id 8F5C
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.379
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 8F5C pdb_00008f5c 10.2210/pdb8f5c/pdb
WWPDB D_1000270027 ? ?
#
_pdbx_database_status.status_code REL
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.entry_id 8F5C
_pdbx_database_status.recvd_initial_deposition_date 2022-11-13
_pdbx_database_status.SG_entry N
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.pdb_format_compatible Y
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
_audit_author.identifier_ORCID
'Zhang, W.' 1 ?
'Dantsu, Y.' 2 ?
#
_citation.abstract ?
_citation.abstract_id_CAS ?
_citation.book_id_ISBN ?
_citation.book_publisher ?
_citation.book_publisher_city ?
_citation.book_title ?
_citation.coordinate_linkage ?
_citation.country DE
_citation.database_id_Medline ?
_citation.details ?
_citation.id primary
_citation.journal_abbrev Chemistryselect
_citation.journal_id_ASTM ?
_citation.journal_id_CSD ?
_citation.journal_id_ISSN 2365-6549
_citation.journal_full ?
_citation.journal_issue ?
_citation.journal_volume ?
_citation.language ?
_citation.page_first ?
_citation.page_last ?
_citation.title
;Synthesis and Structural Characterization of 2'-Deoxy-2'-Methoxy-L-Cytidine Nucleic Acids
;
_citation.year 2023
_citation.database_id_CSD ?
_citation.pdbx_database_id_DOI 10.1002/slct.202301966
_citation.pdbx_database_id_PubMed ?
_citation.pdbx_database_id_patent ?
_citation.unpublished_flag ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Dantsu, Y.' 1 ?
primary 'Zhang, W.' 2 ?
#
_cell.angle_alpha 90.00
_cell.angle_alpha_esd ?
_cell.angle_beta 90.00
_cell.angle_beta_esd ?
_cell.angle_gamma 90.00
_cell.angle_gamma_esd ?
_cell.entry_id 8F5C
_cell.details ?
_cell.formula_units_Z ?
_cell.length_a 41.900
_cell.length_a_esd ?
_cell.length_b 41.900
_cell.length_b_esd ?
_cell.length_c 23.820
_cell.length_c_esd ?
_cell.volume ?
_cell.volume_esd ?
_cell.Z_PDB 8
_cell.reciprocal_angle_alpha ?
_cell.reciprocal_angle_beta ?
_cell.reciprocal_angle_gamma ?
_cell.reciprocal_angle_alpha_esd ?
_cell.reciprocal_angle_beta_esd ?
_cell.reciprocal_angle_gamma_esd ?
_cell.reciprocal_length_a ?
_cell.reciprocal_length_b ?
_cell.reciprocal_length_c ?
_cell.reciprocal_length_a_esd ?
_cell.reciprocal_length_b_esd ?
_cell.reciprocal_length_c_esd ?
_cell.pdbx_unique_axis ?
_cell.pdbx_esd_method ?
#
_symmetry.entry_id 8F5C
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 92
_symmetry.space_group_name_Hall ?
_symmetry.space_group_name_H-M 'P 41 21 2'
_symmetry.pdbx_full_space_group_name_H-M ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn
;DNA (5'-D(*(0DG))-R(P*(XE6))-D(P*(0DG)P*(0DT)P*(0DA)P*(0DC)P*(0DG)P*(0DC))-3')
;
2457.631 1 ? ? ? ?
2 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ?
3 water nat water 18.015 53 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type polydeoxyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer yes
_entity_poly.pdbx_seq_one_letter_code '(0DG)(XE6)(0DG)(0DT)(0DA)(0DC)(0DG)(0DC)'
_entity_poly.pdbx_seq_one_letter_code_can GXGTACGC
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 0DG n
1 2 XE6 n
1 3 0DG n
1 4 0DT n
1 5 0DA n
1 6 0DC n
1 7 0DG n
1 8 0DC n
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num 1
_pdbx_entity_src_syn.pdbx_end_seq_num 8
_pdbx_entity_src_syn.organism_scientific 'synthetic construct'
_pdbx_entity_src_syn.organism_common_name ?
_pdbx_entity_src_syn.ncbi_taxonomy_id 32630
_pdbx_entity_src_syn.details ?
#
_struct_ref.id 1
_struct_ref.db_name PDB
_struct_ref.db_code 8F5C
_struct_ref.pdbx_db_accession 8F5C
_struct_ref.pdbx_db_isoform ?
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_align_begin 1
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 8F5C
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 8
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession 8F5C
_struct_ref_seq.db_align_beg 1
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 8
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 8
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
0DA 'L-DNA linking' .
;2'-DEOXY-L-RIBO-FURANOSYL ADENOSINE-5'-MONOPHOSPHATE
;
? 'C10 H14 N5 O6 P' 331.222
0DC 'L-DNA linking' .
;2'-DEOXY-L-RIBO-FURANOSYL CYTOSINE-5'-MONOPHOSPHATE
;
? 'C9 H14 N3 O7 P' 307.197
0DG 'L-DNA linking' .
;2'-DEOXY-L-RIBO-FURANOSYL GUANINE-5'-MONOPHOSPHATE
;
? 'C10 H14 N5 O7 P' 347.221
0DT 'L-DNA linking' .
;2'-DEOXY-L-RIBO-FURANOSYL THYMIDINE-5'-MONOPHOSPHATE
;
? 'C10 H15 N2 O8 P' 322.208
HOH non-polymer . WATER ? 'H2 O' 18.015
MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305
XE6 'RNA linking' . '4-amino-1-(2-O-methyl-5-O-phosphono-beta-L-ribofuranosyl)pyrimidin-2(1H)-one' ? 'C10 H16 N3 O8 P' 337.223
#
_exptl.absorpt_coefficient_mu ?
_exptl.absorpt_correction_T_max ?
_exptl.absorpt_correction_T_min ?
_exptl.absorpt_correction_type ?
_exptl.absorpt_process_details ?
_exptl.entry_id 8F5C
_exptl.crystals_number 1
_exptl.details ?
_exptl.method 'X-RAY DIFFRACTION'
_exptl.method_details ?
#
_exptl_crystal.colour ?
_exptl_crystal.density_diffrn ?
_exptl_crystal.density_Matthews 2.18
_exptl_crystal.density_method ?
_exptl_crystal.density_percent_sol 42.17
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.id 1
_exptl_crystal.preparation ?
_exptl_crystal.size_max ?
_exptl_crystal.size_mid ?
_exptl_crystal.size_min ?
_exptl_crystal.size_rad ?
_exptl_crystal.colour_lustre ?
_exptl_crystal.colour_modifier ?
_exptl_crystal.colour_primary ?
_exptl_crystal.density_meas ?
_exptl_crystal.density_meas_esd ?
_exptl_crystal.density_meas_gt ?
_exptl_crystal.density_meas_lt ?
_exptl_crystal.density_meas_temp ?
_exptl_crystal.density_meas_temp_esd ?
_exptl_crystal.density_meas_temp_gt ?
_exptl_crystal.density_meas_temp_lt ?
_exptl_crystal.pdbx_crystal_image_url ?
_exptl_crystal.pdbx_crystal_image_format ?
_exptl_crystal.pdbx_mosaicity ?
_exptl_crystal.pdbx_mosaicity_esd ?
_exptl_crystal.pdbx_mosaic_method ?
_exptl_crystal.pdbx_mosaic_block_size ?
_exptl_crystal.pdbx_mosaic_block_size_esd ?
#
_exptl_crystal_grow.apparatus ?
_exptl_crystal_grow.atmosphere ?
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.details ?
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.method_ref ?
_exptl_crystal_grow.pH 7.5
_exptl_crystal_grow.pressure ?
_exptl_crystal_grow.pressure_esd ?
_exptl_crystal_grow.seeding ?
_exptl_crystal_grow.seeding_ref ?
_exptl_crystal_grow.temp 293
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.temp_esd ?
_exptl_crystal_grow.time ?
_exptl_crystal_grow.pdbx_details '0.1M Magnesium chloride, 0.1 M HEPES sodium pH 7.5, 20% v/v (+/-)-2-Methyl-2,4-pentanediol'
_exptl_crystal_grow.pdbx_pH_range ?
#
_diffrn.ambient_environment ?
_diffrn.ambient_temp 99
_diffrn.ambient_temp_details ?
_diffrn.ambient_temp_esd ?
_diffrn.crystal_id 1
_diffrn.crystal_support ?
_diffrn.crystal_treatment ?
_diffrn.details ?
_diffrn.id 1
_diffrn.ambient_pressure ?
_diffrn.ambient_pressure_esd ?
_diffrn.ambient_pressure_gt ?
_diffrn.ambient_pressure_lt ?
_diffrn.ambient_temp_gt ?
_diffrn.ambient_temp_lt ?
_diffrn.pdbx_serial_crystal_experiment N
#
_diffrn_detector.details ?
_diffrn_detector.detector CCD
_diffrn_detector.diffrn_id 1
_diffrn_detector.type 'RAYONIX MX-300'
_diffrn_detector.area_resol_mean ?
_diffrn_detector.dtime ?
_diffrn_detector.pdbx_frames_total ?
_diffrn_detector.pdbx_collection_time_total ?
_diffrn_detector.pdbx_collection_date 2022-10-15
_diffrn_detector.pdbx_frequency ?
#
_diffrn_radiation.collimation ?
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.filter_edge ?
_diffrn_radiation.inhomogeneity ?
_diffrn_radiation.monochromator ?
_diffrn_radiation.polarisn_norm ?
_diffrn_radiation.polarisn_ratio ?
_diffrn_radiation.probe ?
_diffrn_radiation.type ?
_diffrn_radiation.xray_symbol ?
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.pdbx_wavelength_list ?
_diffrn_radiation.pdbx_wavelength ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_analyzer ?
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 0.9787
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.current ?
_diffrn_source.details ?
_diffrn_source.diffrn_id 1
_diffrn_source.power ?
_diffrn_source.size ?
_diffrn_source.source SYNCHROTRON
_diffrn_source.target ?
_diffrn_source.type 'APS BEAMLINE 21-ID-F'
_diffrn_source.voltage ?
_diffrn_source.take-off_angle ?
_diffrn_source.pdbx_wavelength_list 0.9787
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_synchrotron_beamline 21-ID-F
_diffrn_source.pdbx_synchrotron_site APS
#
_reflns.B_iso_Wilson_estimate ?
_reflns.entry_id 8F5C
_reflns.data_reduction_details ?
_reflns.data_reduction_method ?
_reflns.d_resolution_high 1.15
_reflns.d_resolution_low 23.82
_reflns.details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.number_all ?
_reflns.number_obs 7947
_reflns.observed_criterion ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.observed_criterion_I_max ?
_reflns.observed_criterion_I_min ?
_reflns.observed_criterion_sigma_F ?
_reflns.observed_criterion_sigma_I ?
_reflns.percent_possible_obs 99.8
_reflns.R_free_details ?
_reflns.Rmerge_F_all ?
_reflns.Rmerge_F_obs ?
_reflns.Friedel_coverage ?
_reflns.number_gt ?
_reflns.threshold_expression ?
_reflns.pdbx_redundancy 13
_reflns.pdbx_Rmerge_I_obs 0.04
_reflns.pdbx_Rmerge_I_all ?
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_av_sigmaI ?
_reflns.pdbx_netI_over_sigmaI 28.1
_reflns.pdbx_res_netI_over_av_sigmaI_2 ?
_reflns.pdbx_res_netI_over_sigmaI_2 ?
_reflns.pdbx_chi_squared 0.98
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_d_res_high_opt ?
_reflns.pdbx_d_res_low_opt ?
_reflns.pdbx_d_res_opt_method ?
_reflns.phase_calculation_details ?
_reflns.pdbx_Rrim_I_all 0.043
_reflns.pdbx_Rpim_I_all 0.016
_reflns.pdbx_d_opt ?
_reflns.pdbx_number_measured_all ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
_reflns.pdbx_CC_half ?
_reflns.pdbx_CC_star ?
_reflns.pdbx_R_split ?
_reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ?
_reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ?
_reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ?
_reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ?
_reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ?
_reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ?
_reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ?
_reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ?
_reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ?
_reflns.pdbx_aniso_diffraction_limit_1 ?
_reflns.pdbx_aniso_diffraction_limit_2 ?
_reflns.pdbx_aniso_diffraction_limit_3 ?
_reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ?
_reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ?
_reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ?
_reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ?
_reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ?
_reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ?
_reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ?
_reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ?
_reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ?
_reflns.pdbx_aniso_B_tensor_eigenvalue_1 ?
_reflns.pdbx_aniso_B_tensor_eigenvalue_2 ?
_reflns.pdbx_aniso_B_tensor_eigenvalue_3 ?
_reflns.pdbx_orthogonalization_convention ?
_reflns.pdbx_percent_possible_ellipsoidal ?
_reflns.pdbx_percent_possible_spherical ?
_reflns.pdbx_percent_possible_ellipsoidal_anomalous ?
_reflns.pdbx_percent_possible_spherical_anomalous ?
_reflns.pdbx_redundancy_anomalous ?
_reflns.pdbx_CC_half_anomalous ?
_reflns.pdbx_absDiff_over_sigma_anomalous ?
_reflns.pdbx_percent_possible_anomalous ?
_reflns.pdbx_observed_signal_threshold ?
_reflns.pdbx_signal_type ?
_reflns.pdbx_signal_details ?
_reflns.pdbx_signal_software_id ?
_reflns.pdbx_CC_split_method ?
#
_reflns_shell.d_res_high 1.15
_reflns_shell.d_res_low 1.18
_reflns_shell.meanI_over_sigI_all ?
_reflns_shell.meanI_over_sigI_obs 3.0
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_possible ?
_reflns_shell.number_unique_all ?
_reflns_shell.number_unique_obs 558
_reflns_shell.percent_possible_all 97.4
_reflns_shell.percent_possible_obs ?
_reflns_shell.Rmerge_F_all ?
_reflns_shell.Rmerge_F_obs ?
_reflns_shell.Rmerge_I_all ?
_reflns_shell.Rmerge_I_obs 0.723
_reflns_shell.meanI_over_sigI_gt ?
_reflns_shell.meanI_over_uI_all ?
_reflns_shell.meanI_over_uI_gt ?
_reflns_shell.number_measured_gt ?
_reflns_shell.number_unique_gt ?
_reflns_shell.percent_possible_gt ?
_reflns_shell.Rmerge_F_gt ?
_reflns_shell.Rmerge_I_gt ?
_reflns_shell.pdbx_redundancy 10.6
_reflns_shell.pdbx_Rsym_value ?
_reflns_shell.pdbx_chi_squared 0.78
_reflns_shell.pdbx_netI_over_sigmaI_all ?
_reflns_shell.pdbx_netI_over_sigmaI_obs ?
_reflns_shell.pdbx_Rrim_I_all 0.795
_reflns_shell.pdbx_Rpim_I_all 0.325
_reflns_shell.pdbx_rejects ?
_reflns_shell.pdbx_ordinal 1
_reflns_shell.pdbx_diffrn_id 1
_reflns_shell.pdbx_CC_half ?
_reflns_shell.pdbx_CC_star ?
_reflns_shell.pdbx_R_split ?
_reflns_shell.pdbx_percent_possible_ellipsoidal ?
_reflns_shell.pdbx_percent_possible_spherical ?
_reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ?
_reflns_shell.pdbx_percent_possible_spherical_anomalous ?
_reflns_shell.pdbx_redundancy_anomalous ?
_reflns_shell.pdbx_CC_half_anomalous ?
_reflns_shell.pdbx_absDiff_over_sigma_anomalous ?
_reflns_shell.pdbx_percent_possible_anomalous ?
#
_refine.aniso_B[1][1] 0.00
_refine.aniso_B[1][2] -0.00
_refine.aniso_B[1][3] -0.00
_refine.aniso_B[2][2] 0.00
_refine.aniso_B[2][3] -0.00
_refine.aniso_B[3][3] -0.01
_refine.B_iso_max ?
_refine.B_iso_mean 18.957
_refine.B_iso_min ?
_refine.correlation_coeff_Fo_to_Fc 0.975
_refine.correlation_coeff_Fo_to_Fc_free 0.982
_refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS'
_refine.diff_density_max ?
_refine.diff_density_max_esd ?
_refine.diff_density_min ?
_refine.diff_density_min_esd ?
_refine.diff_density_rms ?
_refine.diff_density_rms_esd ?
_refine.entry_id 8F5C
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.ls_abs_structure_details ?
_refine.ls_abs_structure_Flack ?
_refine.ls_abs_structure_Flack_esd ?
_refine.ls_abs_structure_Rogers ?
_refine.ls_abs_structure_Rogers_esd ?
_refine.ls_d_res_high 1.15
_refine.ls_d_res_low 20.71
_refine.ls_extinction_coef ?
_refine.ls_extinction_coef_esd ?
_refine.ls_extinction_expression ?
_refine.ls_extinction_method ?
_refine.ls_goodness_of_fit_all ?
_refine.ls_goodness_of_fit_all_esd ?
_refine.ls_goodness_of_fit_obs ?
_refine.ls_goodness_of_fit_obs_esd ?
_refine.ls_hydrogen_treatment ?
_refine.ls_matrix_type ?
_refine.ls_number_constraints ?
_refine.ls_number_parameters ?
_refine.ls_number_reflns_all ?
_refine.ls_number_reflns_obs 7547
_refine.ls_number_reflns_R_free 367
_refine.ls_number_reflns_R_work ?
_refine.ls_number_restraints ?
_refine.ls_percent_reflns_obs 99.71
_refine.ls_percent_reflns_R_free 4.6
_refine.ls_R_factor_all ?
_refine.ls_R_factor_obs 0.19318
_refine.ls_R_factor_R_free 0.20362
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_R_factor_R_work 0.19266
_refine.ls_R_Fsqd_factor_obs ?
_refine.ls_R_I_factor_obs ?
_refine.ls_redundancy_reflns_all ?
_refine.ls_redundancy_reflns_obs ?
_refine.ls_restrained_S_all ?
_refine.ls_restrained_S_obs ?
_refine.ls_shift_over_esd_max ?
_refine.ls_shift_over_esd_mean ?
_refine.ls_structure_factor_coef ?
_refine.ls_weighting_details ?
_refine.ls_weighting_scheme ?
_refine.ls_wR_factor_all ?
_refine.ls_wR_factor_obs ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.occupancy_max ?
_refine.occupancy_min ?
_refine.solvent_model_details MASK
_refine.solvent_model_param_bsol ?
_refine.solvent_model_param_ksol ?
_refine.pdbx_R_complete ?
_refine.ls_R_factor_gt ?
_refine.ls_goodness_of_fit_gt ?
_refine.ls_goodness_of_fit_ref ?
_refine.ls_shift_over_su_max ?
_refine.ls_shift_over_su_max_lt ?
_refine.ls_shift_over_su_mean ?
_refine.ls_shift_over_su_mean_lt ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F ?
_refine.pdbx_ls_sigma_Fsqd ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_starting_model 7MOO
_refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD'
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_overall_ESU_R 0.041
_refine.pdbx_overall_ESU_R_Free 0.041
_refine.pdbx_solvent_vdw_probe_radii 1.20
_refine.pdbx_solvent_ion_probe_radii 0.80
_refine.pdbx_solvent_shrinkage_radii 0.80
_refine.pdbx_real_space_R ?
_refine.pdbx_density_correlation ?
_refine.pdbx_pd_number_of_powder_patterns ?
_refine.pdbx_pd_number_of_points ?
_refine.pdbx_pd_meas_number_of_points ?
_refine.pdbx_pd_proc_ls_prof_R_factor ?
_refine.pdbx_pd_proc_ls_prof_wR_factor ?
_refine.pdbx_pd_Marquardt_correlation_coeff ?
_refine.pdbx_pd_Fsqrd_R_factor ?
_refine.pdbx_pd_ls_matrix_band_width ?
_refine.pdbx_overall_phase_error ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_diffrn_id 1
_refine.overall_SU_B 0.860
_refine.overall_SU_ML 0.038
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_average_fsc_overall ?
_refine.pdbx_average_fsc_work ?
_refine.pdbx_average_fsc_free ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id 1
_refine_hist.details ?
_refine_hist.d_res_high 1.15
_refine_hist.d_res_low 20.71
_refine_hist.number_atoms_solvent 53
_refine_hist.number_atoms_total 218
_refine_hist.number_reflns_all ?
_refine_hist.number_reflns_obs ?
_refine_hist.number_reflns_R_free ?
_refine_hist.number_reflns_R_work ?
_refine_hist.R_factor_all ?
_refine_hist.R_factor_obs ?
_refine_hist.R_factor_R_free ?
_refine_hist.R_factor_R_work ?
_refine_hist.pdbx_number_residues_total ?
_refine_hist.pdbx_B_iso_mean_ligand ?
_refine_hist.pdbx_B_iso_mean_solvent ?
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 163
_refine_hist.pdbx_number_atoms_ligand 2
_refine_hist.pdbx_number_atoms_lipid ?
_refine_hist.pdbx_number_atoms_carb ?
_refine_hist.pdbx_pseudo_atom_details ?
#
loop_
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.criterion
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.number
_refine_ls_restr.rejects
_refine_ls_restr.type
_refine_ls_restr.weight
_refine_ls_restr.pdbx_restraint_function
'X-RAY DIFFRACTION' ? 0.037 0.026 175 ? r_bond_refined_d ? ?
'X-RAY DIFFRACTION' ? 0.099 0.031 94 ? r_bond_other_d ? ?
'X-RAY DIFFRACTION' ? 3.357 3.102 251 ? r_angle_refined_deg ? ?
'X-RAY DIFFRACTION' ? 4.300 3.514 230 ? r_angle_other_deg ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_1_deg ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_2_deg ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_3_deg ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_4_deg ? ?
'X-RAY DIFFRACTION' ? 0.197 0.200 31 ? r_chiral_restr ? ?
'X-RAY DIFFRACTION' ? 0.030 0.021 94 ? r_gen_planes_refined ? ?
'X-RAY DIFFRACTION' ? 0.002 0.023 29 ? r_gen_planes_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_mcbond_it ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_mcbond_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_mcangle_it ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_mcangle_other ? ?
'X-RAY DIFFRACTION' ? 1.675 1.726 175 ? r_scbond_it ? ?
'X-RAY DIFFRACTION' ? 1.671 1.727 176 ? r_scbond_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ?
'X-RAY DIFFRACTION' ? 2.454 2.580 252 ? r_scangle_other ? ?
'X-RAY DIFFRACTION' ? 3.831 18.752 307 ? r_long_range_B_refined ? ?
'X-RAY DIFFRACTION' ? 3.634 18.201 301 ? r_long_range_B_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ?
#
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_ls_shell.d_res_high 1.151
_refine_ls_shell.d_res_low 1.181
_refine_ls_shell.number_reflns_all ?
_refine_ls_shell.number_reflns_obs ?
_refine_ls_shell.number_reflns_R_free 23
_refine_ls_shell.number_reflns_R_work 531
_refine_ls_shell.percent_reflns_obs 96.68
_refine_ls_shell.percent_reflns_R_free ?
_refine_ls_shell.R_factor_all ?
_refine_ls_shell.R_factor_obs ?
_refine_ls_shell.R_factor_R_free 0.398
_refine_ls_shell.R_factor_R_free_error ?
_refine_ls_shell.R_factor_R_work 0.360
_refine_ls_shell.redundancy_reflns_all ?
_refine_ls_shell.redundancy_reflns_obs ?
_refine_ls_shell.wR_factor_all ?
_refine_ls_shell.wR_factor_obs ?
_refine_ls_shell.wR_factor_R_free ?
_refine_ls_shell.wR_factor_R_work ?
_refine_ls_shell.pdbx_R_complete ?
_refine_ls_shell.pdbx_total_number_of_bins_used 20
_refine_ls_shell.pdbx_phase_error ?
_refine_ls_shell.pdbx_fsc_work ?
_refine_ls_shell.pdbx_fsc_free ?
#
_struct.entry_id 8F5C
_struct.title
;Mirror-image DNA containing 2'-OMe-L-dC modification
;
_struct.pdbx_model_details ?
_struct.pdbx_formula_weight ?
_struct.pdbx_formula_weight_method ?
_struct.pdbx_model_type_details ?
_struct.pdbx_CASP_flag N
#
_struct_keywords.entry_id 8F5C
_struct_keywords.text
;Mirror-image DNA, 2'-OMe modification, DNA
;
_struct_keywords.pdbx_keywords DNA
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 2 ?
D N N 3 ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
covale1 covale both ? A 0DG 1 "O3'" ? ? ? 1_555 A XE6 2 P ? ? A 0DG 1 A XE6 2 1_555 ? ? ? ? ? ? ? 1.673 ? ?
covale2 covale one ? A XE6 2 "O3'" ? ? ? 1_555 A 0DG 3 P ? ? A XE6 2 A 0DG 3 1_555 ? ? ? ? ? ? ? 1.697 ? ?
covale3 covale both ? A 0DG 3 "O3'" ? ? ? 1_555 A 0DT 4 P ? ? A 0DG 3 A 0DT 4 1_555 ? ? ? ? ? ? ? 1.685 ? ?
covale4 covale both ? A 0DT 4 "O3'" ? ? ? 1_555 A 0DA 5 P ? ? A 0DT 4 A 0DA 5 1_555 ? ? ? ? ? ? ? 1.660 ? ?
covale5 covale both ? A 0DA 5 "O3'" ? ? ? 1_555 A 0DC 6 P ? ? A 0DA 5 A 0DC 6 1_555 ? ? ? ? ? ? ? 1.691 ? ?
covale6 covale both ? A 0DC 6 "O3'" ? ? ? 1_555 A 0DG 7 P ? ? A 0DC 6 A 0DG 7 1_555 ? ? ? ? ? ? ? 1.734 ? ?
covale7 covale both ? A 0DG 7 "O3'" ? ? ? 1_555 A 0DC 8 P ? ? A 0DG 7 A 0DC 8 1_555 ? ? ? ? ? ? ? 1.658 ? ?
metalc1 metalc ? ? A 0DG 3 OP2 ? ? ? 1_555 C MG . MG ? ? A 0DG 3 A MG 102 1_555 ? ? ? ? ? ? ? 2.183 ? ?
metalc2 metalc ? ? B MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 101 A HOH 211 7_545 ? ? ? ? ? ? ? 2.149 ? ?
metalc3 metalc ? ? B MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 101 A HOH 219 6_444 ? ? ? ? ? ? ? 1.971 ? ?
metalc4 metalc ? ? B MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 101 A HOH 223 6_444 ? ? ? ? ? ? ? 2.135 ? ?
metalc5 metalc ? ? B MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 101 A HOH 236 7_545 ? ? ? ? ? ? ? 2.187 ? ?
metalc6 metalc ? ? B MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 101 A HOH 249 7_545 ? ? ? ? ? ? ? 2.265 ? ?
metalc7 metalc ? ? B MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 101 A HOH 250 6_444 ? ? ? ? ? ? ? 2.162 ? ?
metalc8 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 102 A HOH 231 1_555 ? ? ? ? ? ? ? 2.188 ? ?
metalc9 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 102 A HOH 232 6_444 ? ? ? ? ? ? ? 2.114 ? ?
metalc10 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 102 A HOH 237 1_555 ? ? ? ? ? ? ? 2.218 ? ?
metalc11 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 102 A HOH 239 1_555 ? ? ? ? ? ? ? 2.128 ? ?
metalc12 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 102 A HOH 242 6_444 ? ? ? ? ? ? ? 2.133 ? ?
hydrog1 hydrog ? ? A 0DG 1 N1 ? ? ? 1_555 A 0DC 8 N3 ? ? A 0DG 1 A 0DC 8 8_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog2 hydrog ? ? A 0DG 1 N2 ? ? ? 1_555 A 0DC 8 O2 ? ? A 0DG 1 A 0DC 8 8_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog3 hydrog ? ? A 0DG 1 O6 ? ? ? 1_555 A 0DC 8 N4 ? ? A 0DG 1 A 0DC 8 8_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog4 hydrog ? ? A 0DG 3 N1 ? ? ? 1_555 A 0DC 6 N3 ? ? A 0DG 3 A 0DC 6 8_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog5 hydrog ? ? A 0DG 3 N2 ? ? ? 1_555 A 0DC 6 O2 ? ? A 0DG 3 A 0DC 6 8_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog6 hydrog ? ? A 0DG 3 O6 ? ? ? 1_555 A 0DC 6 N4 ? ? A 0DG 3 A 0DC 6 8_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog7 hydrog ? ? A 0DC 6 N3 ? ? ? 1_555 A 0DG 3 N1 ? ? A 0DC 6 A 0DG 3 8_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog8 hydrog ? ? A 0DC 6 N4 ? ? ? 1_555 A 0DG 3 O6 ? ? A 0DC 6 A 0DG 3 8_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog9 hydrog ? ? A 0DC 6 O2 ? ? ? 1_555 A 0DG 3 N2 ? ? A 0DC 6 A 0DG 3 8_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog10 hydrog ? ? A 0DC 8 N3 ? ? ? 1_555 A 0DG 1 N1 ? ? A 0DC 8 A 0DG 1 8_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog11 hydrog ? ? A 0DC 8 N4 ? ? ? 1_555 A 0DG 1 O6 ? ? A 0DC 8 A 0DG 1 8_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog12 hydrog ? ? A 0DC 8 O2 ? ? ? 1_555 A 0DG 1 N2 ? ? A 0DC 8 A 0DG 1 8_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
covale ? ?
metalc ? ?
hydrog ? ?
#
_atom_sites.entry_id 8F5C
_atom_sites.Cartn_transf_matrix[1][1] ?
_atom_sites.Cartn_transf_matrix[1][2] ?
_atom_sites.Cartn_transf_matrix[1][3] ?
_atom_sites.Cartn_transf_matrix[2][1] ?
_atom_sites.Cartn_transf_matrix[2][2] ?
_atom_sites.Cartn_transf_matrix[2][3] ?
_atom_sites.Cartn_transf_matrix[3][1] ?
_atom_sites.Cartn_transf_matrix[3][2] ?
_atom_sites.Cartn_transf_matrix[3][3] ?
_atom_sites.Cartn_transf_vector[1] ?
_atom_sites.Cartn_transf_vector[2] ?
_atom_sites.Cartn_transf_vector[3] ?
_atom_sites.fract_transf_matrix[1][1] 0.023866
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.023866
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.041982
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
_atom_sites.solution_primary ?
_atom_sites.solution_secondary ?
_atom_sites.solution_hydrogens ?
_atom_sites.special_details ?
#
loop_
_atom_type.symbol
C
MG
N
O
P
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O "O5'" . 0DG A 1 1 ? -1.411 -6.955 11.449 1.00 19.16 ? 1 0DG A "O5'" 1
HETATM 2 C "C5'" . 0DG A 1 1 ? -2.833 -6.733 11.206 1.00 18.96 ? 1 0DG A "C5'" 1
HETATM 3 C "C4'" . 0DG A 1 1 ? -3.360 -7.934 10.405 1.00 17.58 ? 1 0DG A "C4'" 1
HETATM 4 O "O4'" . 0DG A 1 1 ? -3.304 -9.094 11.272 1.00 15.67 ? 1 0DG A "O4'" 1
HETATM 5 C "C3'" . 0DG A 1 1 ? -2.646 -8.405 9.221 1.00 16.22 ? 1 0DG A "C3'" 1
HETATM 6 O "O3'" . 0DG A 1 1 ? -3.114 -7.637 8.067 1.00 17.57 ? 1 0DG A "O3'" 1
HETATM 7 C "C2'" . 0DG A 1 1 ? -3.081 -9.877 9.102 1.00 15.17 ? 1 0DG A "C2'" 1
HETATM 8 C "C1'" . 0DG A 1 1 ? -3.038 -10.267 10.502 1.00 15.42 ? 1 0DG A "C1'" 1
HETATM 9 N N9 . 0DG A 1 1 ? -1.690 -10.773 10.938 1.00 15.51 ? 1 0DG A N9 1
HETATM 10 C C8 . 0DG A 1 1 ? -0.738 -10.062 11.565 1.00 15.11 ? 1 0DG A C8 1
HETATM 11 N N7 . 0DG A 1 1 ? 0.340 -10.807 11.789 1.00 15.97 ? 1 0DG A N7 1
HETATM 12 C C5 . 0DG A 1 1 ? 0.051 -12.002 11.244 1.00 14.33 ? 1 0DG A C5 1
HETATM 13 C C6 . 0DG A 1 1 ? 0.803 -13.160 11.149 1.00 15.05 ? 1 0DG A C6 1
HETATM 14 O O6 . 0DG A 1 1 ? 1.955 -13.348 11.628 1.00 15.23 ? 1 0DG A O6 1
HETATM 15 N N1 . 0DG A 1 1 ? 0.171 -14.201 10.523 1.00 14.90 ? 1 0DG A N1 1
HETATM 16 C C2 . 0DG A 1 1 ? -1.074 -14.077 9.957 1.00 15.16 ? 1 0DG A C2 1
HETATM 17 N N2 . 0DG A 1 1 ? -1.529 -15.151 9.383 1.00 17.57 ? 1 0DG A N2 1
HETATM 18 N N3 . 0DG A 1 1 ? -1.842 -12.986 10.070 1.00 15.08 ? 1 0DG A N3 1
HETATM 19 C C4 . 0DG A 1 1 ? -1.202 -11.999 10.690 1.00 14.54 ? 1 0DG A C4 1
HETATM 20 O O2 . XE6 A 1 2 ? 0.619 -14.321 6.439 1.00 15.61 ? 2 XE6 A O2 1
HETATM 21 C C2 . XE6 A 1 2 ? 0.812 -13.240 6.991 1.00 15.90 ? 2 XE6 A C2 1
HETATM 22 N N3 . XE6 A 1 2 ? 1.894 -13.023 7.815 1.00 15.14 ? 2 XE6 A N3 1
HETATM 23 C C4 . XE6 A 1 2 ? 2.133 -11.850 8.411 1.00 14.96 ? 2 XE6 A C4 1
HETATM 24 N N4 . XE6 A 1 2 ? 3.198 -11.744 9.141 1.00 15.17 ? 2 XE6 A N4 1
HETATM 25 C C5 . XE6 A 1 2 ? 1.259 -10.791 8.203 1.00 15.29 ? 2 XE6 A C5 1
HETATM 26 C C6 . XE6 A 1 2 ? 0.137 -11.005 7.438 1.00 15.78 ? 2 XE6 A C6 1
HETATM 27 N N1 . XE6 A 1 2 ? -0.062 -12.212 6.811 1.00 15.14 ? 2 XE6 A N1 1
HETATM 28 C "C1'" . XE6 A 1 2 ? -1.208 -12.491 5.919 1.00 15.92 ? 2 XE6 A "C1'" 1
HETATM 29 O "O4'" . XE6 A 1 2 ? -2.261 -11.512 6.200 1.00 17.66 ? 2 XE6 A "O4'" 1
HETATM 30 C "C4'" . XE6 A 1 2 ? -2.473 -10.722 5.013 1.00 17.31 ? 2 XE6 A "C4'" 1
HETATM 31 C "C5'" . XE6 A 1 2 ? -2.846 -9.303 5.350 1.00 17.33 ? 2 XE6 A "C5'" 1
HETATM 32 O "O5'" . XE6 A 1 2 ? -1.810 -8.691 6.066 1.00 18.67 ? 2 XE6 A "O5'" 1
HETATM 33 P P . XE6 A 1 2 ? -2.072 -7.292 6.805 1.00 18.96 ? 2 XE6 A P 1
HETATM 34 O OP1 . XE6 A 1 2 ? -0.768 -6.854 7.270 1.00 20.23 ? 2 XE6 A OP1 1
HETATM 35 O OP2 . XE6 A 1 2 ? -2.886 -6.340 5.926 1.00 19.23 ? 2 XE6 A OP2 1
HETATM 36 C "C3'" . XE6 A 1 2 ? -1.138 -10.898 4.323 1.00 18.98 ? 2 XE6 A "C3'" 1
HETATM 37 O "O3'" . XE6 A 1 2 ? -1.301 -10.548 2.898 1.00 20.06 ? 2 XE6 A "O3'" 1
HETATM 38 C "C2'" . XE6 A 1 2 ? -0.815 -12.347 4.469 1.00 17.43 ? 2 XE6 A "C2'" 1
HETATM 39 O "O2'" . XE6 A 1 2 ? -1.732 -13.075 3.614 1.00 19.25 ? 2 XE6 A "O2'" 1
HETATM 40 C C22 . XE6 A 1 2 ? -1.555 -14.494 3.559 1.00 20.45 ? 2 XE6 A C22 1
HETATM 41 P P . 0DG A 1 3 ? 0.033 -9.798 2.165 1.00 21.95 ? 3 0DG A P 1
HETATM 42 O OP1 . 0DG A 1 3 ? 0.641 -8.887 2.971 1.00 22.18 ? 3 0DG A OP1 1
HETATM 43 O OP2 . 0DG A 1 3 ? -0.587 -9.414 0.847 1.00 24.71 ? 3 0DG A OP2 1
HETATM 44 O "O5'" . 0DG A 1 3 ? 1.048 -11.004 1.926 1.00 19.99 ? 3 0DG A "O5'" 1
HETATM 45 C "C5'" . 0DG A 1 3 ? 0.684 -12.078 1.108 1.00 19.49 ? 3 0DG A "C5'" 1
HETATM 46 C "C4'" . 0DG A 1 3 ? 1.644 -13.254 1.247 1.00 19.67 ? 3 0DG A "C4'" 1
HETATM 47 O "O4'" . 0DG A 1 3 ? 1.608 -13.638 2.615 1.00 18.81 ? 3 0DG A "O4'" 1
HETATM 48 C "C3'" . 0DG A 1 3 ? 3.058 -12.928 0.948 1.00 19.12 ? 3 0DG A "C3'" 1
HETATM 49 O "O3'" . 0DG A 1 3 ? 3.203 -13.091 -0.499 1.00 20.75 ? 3 0DG A "O3'" 1
HETATM 50 C "C2'" . 0DG A 1 3 ? 3.705 -14.106 1.637 1.00 19.29 ? 3 0DG A "C2'" 1
HETATM 51 C "C1'" . 0DG A 1 3 ? 2.941 -14.138 2.928 1.00 19.81 ? 3 0DG A "C1'" 1
HETATM 52 N N9 . 0DG A 1 3 ? 3.498 -13.319 4.041 1.00 16.57 ? 3 0DG A N9 1
HETATM 53 C C8 . 0DG A 1 3 ? 3.135 -12.130 4.487 1.00 16.06 ? 3 0DG A C8 1
HETATM 54 N N7 . 0DG A 1 3 ? 3.869 -11.705 5.510 1.00 14.82 ? 3 0DG A N7 1
HETATM 55 C C5 . 0DG A 1 3 ? 4.778 -12.735 5.662 1.00 15.43 ? 3 0DG A C5 1
HETATM 56 C C6 . 0DG A 1 3 ? 5.841 -12.948 6.553 1.00 14.30 ? 3 0DG A C6 1
HETATM 57 O O6 . 0DG A 1 3 ? 6.184 -12.187 7.489 1.00 15.08 ? 3 0DG A O6 1
HETATM 58 N N1 . 0DG A 1 3 ? 6.557 -14.125 6.374 1.00 14.36 ? 3 0DG A N1 1
HETATM 59 C C2 . 0DG A 1 3 ? 6.285 -15.046 5.445 1.00 14.10 ? 3 0DG A C2 1
HETATM 60 N N2 . 0DG A 1 3 ? 7.033 -16.080 5.398 1.00 15.61 ? 3 0DG A N2 1
HETATM 61 N N3 . 0DG A 1 3 ? 5.297 -14.829 4.591 1.00 16.54 ? 3 0DG A N3 1
HETATM 62 C C4 . 0DG A 1 3 ? 4.572 -13.700 4.758 1.00 14.95 ? 3 0DG A C4 1
HETATM 63 P P . 0DT A 1 4 ? 4.571 -12.511 -1.293 1.00 21.35 ? 4 0DT A P 1
HETATM 64 O OP1 . 0DT A 1 4 ? 4.835 -11.254 -0.778 1.00 20.57 ? 4 0DT A OP1 1
HETATM 65 O OP2 . 0DT A 1 4 ? 4.188 -12.754 -2.773 1.00 24.16 ? 4 0DT A OP2 1
HETATM 66 O "O5'" . 0DT A 1 4 ? 5.700 -13.554 -0.842 1.00 20.52 ? 4 0DT A "O5'" 1
HETATM 67 C "C5'" . 0DT A 1 4 ? 5.771 -14.929 -1.174 1.00 21.63 ? 4 0DT A "C5'" 1
HETATM 68 C "C4'" . 0DT A 1 4 ? 7.007 -15.529 -0.507 1.00 24.88 ? 4 0DT A "C4'" 1
HETATM 69 O "O4'" . 0DT A 1 4 ? 6.874 -15.415 0.908 1.00 24.25 ? 4 0DT A "O4'" 1
HETATM 70 C "C3'" . 0DT A 1 4 ? 8.271 -14.794 -0.798 1.00 25.29 ? 4 0DT A "C3'" 1
HETATM 71 O "O3'" . 0DT A 1 4 ? 8.804 -15.436 -2.002 1.00 22.40 ? 4 0DT A "O3'" 1
HETATM 72 C "C2'" . 0DT A 1 4 ? 9.104 -15.166 0.389 1.00 23.55 ? 4 0DT A "C2'" 1
HETATM 73 C "C1'" . 0DT A 1 4 ? 8.194 -15.171 1.480 1.00 24.13 ? 4 0DT A "C1'" 1
HETATM 74 N N1 . 0DT A 1 4 ? 8.198 -13.969 2.337 1.00 20.15 ? 4 0DT A N1 1
HETATM 75 C C2 . 0DT A 1 4 ? 8.987 -13.950 3.410 1.00 15.10 ? 4 0DT A C2 1
HETATM 76 O O2 . 0DT A 1 4 ? 9.875 -14.834 3.590 1.00 17.64 ? 4 0DT A O2 1
HETATM 77 N N3 . 0DT A 1 4 ? 8.879 -12.928 4.241 1.00 14.95 ? 4 0DT A N3 1
HETATM 78 C C4 . 0DT A 1 4 ? 7.984 -11.900 4.050 1.00 14.35 ? 4 0DT A C4 1
HETATM 79 O O4 . 0DT A 1 4 ? 7.964 -11.034 4.885 1.00 16.19 ? 4 0DT A O4 1
HETATM 80 C C5 . 0DT A 1 4 ? 7.147 -11.886 2.921 1.00 16.66 ? 4 0DT A C5 1
HETATM 81 C C5M . 0DT A 1 4 ? 6.187 -10.920 2.622 1.00 18.98 ? 4 0DT A C5M 1
HETATM 82 C C6 . 0DT A 1 4 ? 7.255 -12.950 2.095 1.00 18.03 ? 4 0DT A C6 1
HETATM 83 C C8A . 0DA A 1 5 ? 11.511 -12.360 1.568 1.00 15.06 ? 5 0DA A C8A 1
HETATM 84 N N9A . 0DA A 1 5 ? 12.507 -13.006 2.215 1.00 15.24 ? 5 0DA A N9A 1
HETATM 85 C C4A . 0DA A 1 5 ? 12.779 -12.326 3.330 1.00 14.08 ? 5 0DA A C4A 1
HETATM 86 C C5A . 0DA A 1 5 ? 11.861 -11.266 3.350 1.00 13.94 ? 5 0DA A C5A 1
HETATM 87 N N7A . 0DA A 1 5 ? 11.079 -11.306 2.268 1.00 14.80 ? 5 0DA A N7A 1
HETATM 88 N N3A . 0DA A 1 5 ? 13.708 -12.523 4.288 1.00 13.79 ? 5 0DA A N3A 1
HETATM 89 C C2A . 0DA A 1 5 ? 13.710 -11.662 5.281 1.00 13.94 ? 5 0DA A C2A 1
HETATM 90 N N1A . 0DA A 1 5 ? 12.807 -10.615 5.369 1.00 13.61 ? 5 0DA A N1A 1
HETATM 91 C C6A . 0DA A 1 5 ? 11.922 -10.451 4.418 1.00 13.61 ? 5 0DA A C6A 1
HETATM 92 N N6A . 0DA A 1 5 ? 11.070 -9.452 4.598 1.00 15.20 ? 5 0DA A N6A 1
HETATM 93 C "C4'" . 0DA A 1 5 ? 13.165 -14.810 -0.540 1.00 17.46 ? 5 0DA A "C4'" 1
HETATM 94 O "O4'" . 0DA A 1 5 ? 12.331 -14.791 0.659 1.00 17.46 ? 5 0DA A "O4'" 1
HETATM 95 C "C3'" . 0DA A 1 5 ? 14.331 -13.942 -0.165 1.00 17.44 ? 5 0DA A "C3'" 1
HETATM 96 C "C2'" . 0DA A 1 5 ? 14.575 -14.254 1.228 1.00 16.34 ? 5 0DA A "C2'" 1
HETATM 97 C "C1'" . 0DA A 1 5 ? 13.120 -14.353 1.709 1.00 15.63 ? 5 0DA A "C1'" 1
HETATM 98 O "O3'" . 0DA A 1 5 ? 15.444 -14.395 -0.976 1.00 18.26 ? 5 0DA A "O3'" 1
HETATM 99 C "C5'" . 0DA A 1 5 ? 12.375 -14.282 -1.698 1.00 20.05 ? 5 0DA A "C5'" 1
HETATM 100 O "O5'" . 0DA A 1 5 ? 11.302 -15.182 -1.796 1.00 23.11 ? 5 0DA A "O5'" 1
HETATM 101 P P . 0DA A 1 5 ? 10.106 -14.779 -2.795 1.00 25.74 ? 5 0DA A P 1
HETATM 102 O OP2 . 0DA A 1 5 ? 10.290 -15.633 -3.949 1.00 26.54 ? 5 0DA A OP2 1
HETATM 103 O OP1 . 0DA A 1 5 ? 9.964 -13.295 -2.894 1.00 31.14 ? 5 0DA A OP1 1
HETATM 104 P P . 0DC A 1 6 ? 16.591 -13.258 -1.477 1.00 18.11 ? 6 0DC A P 1
HETATM 105 O OP1 . 0DC A 1 6 ? 15.911 -12.220 -2.116 1.00 19.72 ? 6 0DC A OP1 1
HETATM 106 O OP2 . 0DC A 1 6 ? 17.571 -14.061 -2.211 1.00 19.95 ? 6 0DC A OP2 1
HETATM 107 O "O5'" . 0DC A 1 6 ? 17.227 -12.625 -0.202 1.00 17.51 ? 6 0DC A "O5'" 1
HETATM 108 C "C5'" . 0DC A 1 6 ? 18.135 -13.393 0.599 1.00 17.81 ? 6 0DC A "C5'" 1
HETATM 109 C "C4'" . 0DC A 1 6 ? 18.366 -12.655 1.899 1.00 17.12 ? 6 0DC A "C4'" 1
HETATM 110 O "O4'" . 0DC A 1 6 ? 17.139 -12.486 2.612 1.00 15.82 ? 6 0DC A "O4'" 1
HETATM 111 C "C3'" . 0DC A 1 6 ? 18.794 -11.255 1.715 1.00 15.70 ? 6 0DC A "C3'" 1
HETATM 112 O "O3'" . 0DC A 1 6 ? 20.212 -11.251 1.341 1.00 20.41 ? 6 0DC A "O3'" 1
HETATM 113 C "C2'" . 0DC A 1 6 ? 18.567 -10.648 3.063 1.00 17.09 ? 6 0DC A "C2'" 1
HETATM 114 C "C1'" . 0DC A 1 6 ? 17.227 -11.272 3.329 1.00 15.39 ? 6 0DC A "C1'" 1
HETATM 115 N N1 . 0DC A 1 6 ? 16.092 -10.367 2.913 1.00 14.49 ? 6 0DC A N1 1
HETATM 116 C C2 . 0DC A 1 6 ? 15.757 -9.375 3.829 1.00 13.52 ? 6 0DC A C2 1
HETATM 117 O O2 . 0DC A 1 6 ? 16.436 -9.192 4.827 1.00 14.89 ? 6 0DC A O2 1
HETATM 118 N N3 . 0DC A 1 6 ? 14.677 -8.575 3.541 1.00 13.23 ? 6 0DC A N3 1
HETATM 119 C C4 . 0DC A 1 6 ? 13.988 -8.729 2.374 1.00 13.93 ? 6 0DC A C4 1
HETATM 120 N N4 . 0DC A 1 6 ? 13.002 -7.928 2.135 1.00 14.51 ? 6 0DC A N4 1
HETATM 121 C C5 . 0DC A 1 6 ? 14.387 -9.731 1.468 1.00 14.47 ? 6 0DC A C5 1
HETATM 122 C C6 . 0DC A 1 6 ? 15.403 -10.512 1.782 1.00 14.59 ? 6 0DC A C6 1
HETATM 123 P P . 0DG A 1 7 ? 20.733 -9.974 0.290 1.00 20.92 ? 7 0DG A P 1
HETATM 124 O OP1 . 0DG A 1 7 ? 19.763 -9.622 -0.764 1.00 21.59 ? 7 0DG A OP1 1
HETATM 125 O OP2 . 0DG A 1 7 ? 22.150 -10.451 0.015 1.00 26.72 ? 7 0DG A OP2 1
HETATM 126 O "O5'" . 0DG A 1 7 ? 20.794 -8.749 1.313 1.00 17.38 ? 7 0DG A "O5'" 1
HETATM 127 C "C5'" . 0DG A 1 7 ? 21.704 -8.780 2.446 1.00 15.74 ? 7 0DG A "C5'" 1
HETATM 128 C "C4'" . 0DG A 1 7 ? 21.402 -7.516 3.261 1.00 15.21 ? 7 0DG A "C4'" 1
HETATM 129 O "O4'" . 0DG A 1 7 ? 20.117 -7.618 3.828 1.00 14.98 ? 7 0DG A "O4'" 1
HETATM 130 C "C3'" . 0DG A 1 7 ? 21.430 -6.204 2.634 1.00 15.28 ? 7 0DG A "C3'" 1
HETATM 131 O "O3'" . 0DG A 1 7 ? 22.843 -5.826 2.545 1.00 16.85 ? 7 0DG A "O3'" 1
HETATM 132 C "C2'" . 0DG A 1 7 ? 20.684 -5.329 3.664 1.00 14.78 ? 7 0DG A "C2'" 1
HETATM 133 C "C1'" . 0DG A 1 7 ? 19.619 -6.293 4.055 1.00 15.06 ? 7 0DG A "C1'" 1
HETATM 134 N N9 . 0DG A 1 7 ? 18.343 -6.164 3.273 1.00 13.57 ? 7 0DG A N9 1
HETATM 135 C C8 . 0DG A 1 7 ? 17.926 -6.851 2.230 1.00 13.48 ? 7 0DG A C8 1
HETATM 136 N N7 . 0DG A 1 7 ? 16.754 -6.459 1.829 1.00 13.42 ? 7 0DG A N7 1
HETATM 137 C C5 . 0DG A 1 7 ? 16.358 -5.477 2.726 1.00 13.49 ? 7 0DG A C5 1
HETATM 138 C C6 . 0DG A 1 7 ? 15.225 -4.677 2.851 1.00 13.68 ? 7 0DG A C6 1
HETATM 139 O O6 . 0DG A 1 7 ? 14.185 -4.753 2.127 1.00 14.22 ? 7 0DG A O6 1
HETATM 140 N N1 . 0DG A 1 7 ? 15.302 -3.764 3.838 1.00 14.27 ? 7 0DG A N1 1
HETATM 141 C C2 . 0DG A 1 7 ? 16.324 -3.617 4.697 1.00 14.23 ? 7 0DG A C2 1
HETATM 142 N N2 . 0DG A 1 7 ? 16.238 -2.682 5.607 1.00 15.03 ? 7 0DG A N2 1
HETATM 143 N N3 . 0DG A 1 7 ? 17.414 -4.371 4.621 1.00 14.07 ? 7 0DG A N3 1
HETATM 144 C C4 . 0DG A 1 7 ? 17.368 -5.280 3.638 1.00 13.31 ? 7 0DG A C4 1
HETATM 145 P P . 0DC A 1 8 ? 23.332 -4.719 1.411 1.00 19.66 ? 8 0DC A P 1
HETATM 146 O OP1 . 0DC A 1 8 ? 22.728 -5.106 0.127 1.00 22.75 ? 8 0DC A OP1 1
HETATM 147 O OP2 . 0DC A 1 8 ? 24.875 -4.675 1.536 1.00 21.40 ? 8 0DC A OP2 1
HETATM 148 O "O5'" . 0DC A 1 8 ? 22.622 -3.400 1.829 1.00 18.87 ? 8 0DC A "O5'" 1
HETATM 149 C "C5'" . 0DC A 1 8 ? 23.040 -2.770 3.043 1.00 19.61 ? 8 0DC A "C5'" 1
HETATM 150 C "C4'" . 0DC A 1 8 ? 22.266 -1.507 3.336 1.00 19.69 ? 8 0DC A "C4'" 1
HETATM 151 O "O4'" . 0DC A 1 8 ? 20.915 -1.820 3.347 1.00 21.01 ? 8 0DC A "O4'" 1
HETATM 152 C "C3'" . 0DC A 1 8 ? 22.471 -0.424 2.233 1.00 24.95 ? 8 0DC A "C3'" 1
HETATM 153 O "O3'" . 0DC A 1 8 ? 22.730 0.919 2.819 1.00 32.80 ? 8 0DC A "O3'" 1
HETATM 154 C "C2'" . 0DC A 1 8 ? 21.138 -0.372 1.572 1.00 23.49 ? 8 0DC A "C2'" 1
HETATM 155 C "C1'" . 0DC A 1 8 ? 20.169 -0.887 2.660 1.00 20.48 ? 8 0DC A "C1'" 1
HETATM 156 N N1 . 0DC A 1 8 ? 19.037 -1.598 1.990 1.00 17.54 ? 8 0DC A N1 1
HETATM 157 C C2 . 0DC A 1 8 ? 17.759 -1.080 2.158 1.00 17.14 ? 8 0DC A C2 1
HETATM 158 O O2 . 0DC A 1 8 ? 17.540 -0.123 2.883 1.00 19.59 ? 8 0DC A O2 1
HETATM 159 N N3 . 0DC A 1 8 ? 16.773 -1.668 1.479 1.00 15.64 ? 8 0DC A N3 1
HETATM 160 C C4 . 0DC A 1 8 ? 16.982 -2.698 0.675 1.00 15.17 ? 8 0DC A C4 1
HETATM 161 N N4 . 0DC A 1 8 ? 15.987 -3.207 0.014 1.00 14.16 ? 8 0DC A N4 1
HETATM 162 C C5 . 0DC A 1 8 ? 18.292 -3.254 0.512 1.00 16.06 ? 8 0DC A C5 1
HETATM 163 C C6 . 0DC A 1 8 ? 19.304 -2.679 1.190 1.00 16.84 ? 8 0DC A C6 1
HETATM 164 MG MG . MG B 2 . ? -6.092 -14.297 -3.897 0.50 15.85 ? 101 MG A MG 1
HETATM 165 MG MG . MG C 2 . ? -0.767 -9.077 -1.302 0.60 22.63 ? 102 MG A MG 1
HETATM 166 O O . HOH D 3 . ? 20.856 -4.463 -1.483 1.00 35.52 ? 201 HOH A O 1
HETATM 167 O O . HOH D 3 . ? 7.207 -8.591 5.027 1.00 28.78 ? 202 HOH A O 1
HETATM 168 O O . HOH D 3 . ? 3.605 -9.089 -0.128 1.00 33.73 ? 203 HOH A O 1
HETATM 169 O O . HOH D 3 . ? 0.008 -5.820 9.523 1.00 36.18 ? 204 HOH A O 1
HETATM 170 O O . HOH D 3 . ? 5.650 -9.843 8.515 1.00 28.64 ? 205 HOH A O 1
HETATM 171 O O . HOH D 3 . ? -3.639 -3.984 6.872 1.00 21.27 ? 206 HOH A O 1
HETATM 172 O O . HOH D 3 . ? 18.460 -16.394 -1.326 1.00 27.13 ? 207 HOH A O 1
HETATM 173 O O . HOH D 3 . ? 3.775 -11.934 12.944 1.00 23.30 ? 208 HOH A O 1
HETATM 174 O O . HOH D 3 . ? -3.005 -6.202 3.274 1.00 32.09 ? 209 HOH A O 1
HETATM 175 O O . HOH D 3 . ? 5.010 -16.778 2.805 1.00 26.00 ? 210 HOH A O 1
HETATM 176 O O . HOH D 3 . ? 26.265 -4.413 3.811 1.00 19.80 ? 211 HOH A O 1
HETATM 177 O O . HOH D 3 . ? 3.762 -9.171 6.375 1.00 21.74 ? 212 HOH A O 1
HETATM 178 O O . HOH D 3 . ? 3.337 -8.748 2.741 1.00 31.27 ? 213 HOH A O 1
HETATM 179 O O . HOH D 3 . ? 12.472 -17.150 -4.483 0.50 31.63 ? 214 HOH A O 1
HETATM 180 O O . HOH D 3 . ? 17.149 -9.696 -1.482 1.00 22.33 ? 215 HOH A O 1
HETATM 181 O O . HOH D 3 . ? 7.315 -10.155 -0.793 1.00 28.10 ? 216 HOH A O 1
HETATM 182 O O . HOH D 3 . ? -3.224 -12.544 1.394 1.00 27.85 ? 217 HOH A O 1
HETATM 183 O O . HOH D 3 . ? 9.359 -9.518 1.130 1.00 28.75 ? 218 HOH A O 1
HETATM 184 O O . HOH D 3 . ? 15.794 -7.476 -0.531 1.00 19.43 ? 219 HOH A O 1
HETATM 185 O O . HOH D 3 . ? -0.272 -6.363 2.302 0.50 25.45 ? 220 HOH A O 1
HETATM 186 O O . HOH D 3 . ? 0.455 -4.618 6.168 0.50 26.61 ? 221 HOH A O 1
HETATM 187 O O . HOH D 3 . ? -1.056 -5.878 13.985 1.00 26.32 ? 222 HOH A O 1
HETATM 188 O O . HOH D 3 . ? 13.781 -5.736 -0.459 1.00 20.94 ? 223 HOH A O 1
HETATM 189 O O . HOH D 3 . ? 6.111 -13.368 -4.715 0.50 25.45 ? 224 HOH A O 1
HETATM 190 O O . HOH D 3 . ? 16.875 0.673 5.489 1.00 24.26 ? 225 HOH A O 1
HETATM 191 O O . HOH D 3 . ? 2.329 -9.288 13.084 1.00 40.49 ? 226 HOH A O 1
HETATM 192 O O . HOH D 3 . ? 15.215 -14.925 4.631 1.00 17.20 ? 227 HOH A O 1
HETATM 193 O O . HOH D 3 . ? 1.300 -7.981 5.599 1.00 24.55 ? 228 HOH A O 1
HETATM 194 O O . HOH D 3 . ? 13.495 -10.685 -1.931 1.00 26.42 ? 229 HOH A O 1
HETATM 195 O O . HOH D 3 . ? 21.922 -13.082 -1.139 0.50 26.63 ? 230 HOH A O 1
HETATM 196 O O . HOH D 3 . ? 0.002 -7.098 -0.772 0.60 33.21 ? 231 HOH A O 1
HETATM 197 O O . HOH D 3 . ? 20.035 -12.564 -2.661 0.60 21.03 ? 232 HOH A O 1
HETATM 198 O O . HOH D 3 . ? 11.359 -7.966 -0.283 1.00 28.53 ? 233 HOH A O 1
HETATM 199 O O . HOH D 3 . ? 19.708 -3.056 5.885 1.00 20.35 ? 234 HOH A O 1
HETATM 200 O O . HOH D 3 . ? 21.133 -8.545 -3.223 0.50 31.36 ? 235 HOH A O 1
HETATM 201 O O . HOH D 3 . ? 26.212 -7.166 2.596 1.00 33.49 ? 236 HOH A O 1
HETATM 202 O O . HOH D 3 . ? -2.628 -7.938 -0.905 0.60 33.98 ? 237 HOH A O 1
HETATM 203 O O . HOH D 3 . ? 18.143 -2.468 8.019 1.00 23.11 ? 238 HOH A O 1
HETATM 204 O O . HOH D 3 . ? 1.281 -9.568 -1.609 0.60 23.02 ? 239 HOH A O 1
HETATM 205 O O . HOH D 3 . ? 9.603 -14.309 -6.700 0.50 24.40 ? 240 HOH A O 1
HETATM 206 O O . HOH D 3 . ? 16.282 -15.925 -4.386 1.00 47.44 ? 241 HOH A O 1
HETATM 207 O O . HOH D 3 . ? 19.410 -10.036 -3.894 0.60 37.59 ? 242 HOH A O 1
HETATM 208 O O . HOH D 3 . ? 8.600 -7.952 2.892 1.00 40.84 ? 243 HOH A O 1
HETATM 209 O O . HOH D 3 . ? 19.079 -6.419 -1.510 1.00 39.50 ? 244 HOH A O 1
HETATM 210 O O . HOH D 3 . ? 26.110 -1.619 0.417 0.50 32.82 ? 245 HOH A O 1
HETATM 211 O O . HOH D 3 . ? 4.152 -17.524 0.159 1.00 35.00 ? 246 HOH A O 1
HETATM 212 O O . HOH D 3 . ? 5.698 -10.397 11.492 1.00 37.19 ? 247 HOH A O 1
HETATM 213 O O . HOH D 3 . ? 17.334 -16.116 3.376 1.00 20.86 ? 248 HOH A O 1
HETATM 214 O O . HOH D 3 . ? 28.830 -5.122 2.259 1.00 30.32 ? 249 HOH A O 1
HETATM 215 O O . HOH D 3 . ? 13.152 -7.978 -2.142 1.00 31.78 ? 250 HOH A O 1
HETATM 216 O O . HOH D 3 . ? 4.834 -7.510 4.709 1.00 65.42 ? 251 HOH A O 1
HETATM 217 O O . HOH D 3 . ? 28.892 -2.701 1.210 1.00 36.40 ? 252 HOH A O 1
HETATM 218 O O . HOH D 3 . ? 13.968 -13.968 -5.955 0.50 54.58 ? 253 HOH A O 1
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 0DG 1 1 1 0DG 0DG A . n
A 1 2 XE6 2 2 2 XE6 0MC A . n
A 1 3 0DG 3 3 3 0DG 0DG A . n
A 1 4 0DT 4 4 4 0DT 0DT A . n
A 1 5 0DA 5 5 5 0DA 0DA A . n
A 1 6 0DC 6 6 6 0DC 0DC A . n
A 1 7 0DG 7 7 7 0DG 0DG A . n
A 1 8 0DC 8 8 8 0DC 0DC A . n
#
_pdbx_contact_author.id 2
_pdbx_contact_author.email wz15@iu.edu
_pdbx_contact_author.name_first Wen
_pdbx_contact_author.name_last Zhang
_pdbx_contact_author.name_mi ?
_pdbx_contact_author.role 'principal investigator/group leader'
_pdbx_contact_author.identifier_ORCID 0000-0003-4811-4384
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MG 1 101 1 MG MG A .
C 2 MG 1 102 2 MG MG A .
D 3 HOH 1 201 42 HOH HOH A .
D 3 HOH 2 202 8 HOH HOH A .
D 3 HOH 3 203 29 HOH HOH A .
D 3 HOH 4 204 38 HOH HOH A .
D 3 HOH 5 205 9 HOH HOH A .
D 3 HOH 6 206 4 HOH HOH A .
D 3 HOH 7 207 24 HOH HOH A .
D 3 HOH 8 208 10 HOH HOH A .
D 3 HOH 9 209 23 HOH HOH A .
D 3 HOH 10 210 27 HOH HOH A .
D 3 HOH 11 211 13 HOH HOH A .
D 3 HOH 12 212 2 HOH HOH A .
D 3 HOH 13 213 45 HOH HOH A .
D 3 HOH 14 214 46 HOH HOH A .
D 3 HOH 15 215 17 HOH HOH A .
D 3 HOH 16 216 3 HOH HOH A .
D 3 HOH 17 217 25 HOH HOH A .
D 3 HOH 18 218 7 HOH HOH A .
D 3 HOH 19 219 1 HOH HOH A .
D 3 HOH 20 220 48 HOH HOH A .
D 3 HOH 21 221 49 HOH HOH A .
D 3 HOH 22 222 18 HOH HOH A .
D 3 HOH 23 223 11 HOH HOH A .
D 3 HOH 24 224 43 HOH HOH A .
D 3 HOH 25 225 20 HOH HOH A .
D 3 HOH 26 226 47 HOH HOH A .
D 3 HOH 27 227 5 HOH HOH A .
D 3 HOH 28 228 22 HOH HOH A .
D 3 HOH 29 229 16 HOH HOH A .
D 3 HOH 30 230 54 HOH HOH A .
D 3 HOH 31 231 40 HOH HOH A .
D 3 HOH 32 232 31 HOH HOH A .
D 3 HOH 33 233 35 HOH HOH A .
D 3 HOH 34 234 19 HOH HOH A .
D 3 HOH 35 235 50 HOH HOH A .
D 3 HOH 36 236 12 HOH HOH A .
D 3 HOH 37 237 41 HOH HOH A .
D 3 HOH 38 238 21 HOH HOH A .
D 3 HOH 39 239 32 HOH HOH A .
D 3 HOH 40 240 51 HOH HOH A .
D 3 HOH 41 241 44 HOH HOH A .
D 3 HOH 42 242 39 HOH HOH A .
D 3 HOH 43 243 53 HOH HOH A .
D 3 HOH 44 244 14 HOH HOH A .
D 3 HOH 45 245 52 HOH HOH A .
D 3 HOH 46 246 28 HOH HOH A .
D 3 HOH 47 247 37 HOH HOH A .
D 3 HOH 48 248 6 HOH HOH A .
D 3 HOH 49 249 33 HOH HOH A .
D 3 HOH 50 250 36 HOH HOH A .
D 3 HOH 51 251 55 HOH HOH A .
D 3 HOH 52 252 15 HOH HOH A .
D 3 HOH 53 253 26 HOH HOH A .
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
loop_
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
_pdbx_struct_assembly_gen.asym_id_list
1 1 A,B,C,D
1 2 A,B,C,D
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 8_555 -y,-x,-z+1/2 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 11.9100000000
#
_pdbx_struct_special_symmetry.id 1
_pdbx_struct_special_symmetry.PDB_model_num 1
_pdbx_struct_special_symmetry.auth_asym_id A
_pdbx_struct_special_symmetry.auth_comp_id HOH
_pdbx_struct_special_symmetry.auth_seq_id 253
_pdbx_struct_special_symmetry.PDB_ins_code ?
_pdbx_struct_special_symmetry.label_asym_id D
_pdbx_struct_special_symmetry.label_comp_id HOH
_pdbx_struct_special_symmetry.label_seq_id .
#
loop_
_pdbx_struct_conn_angle.id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_alt_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_auth_atom_id
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_alt_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr2_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_atom_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code
_pdbx_struct_conn_angle.ptnr2_symmetry
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_alt_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_atom_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_pdbx_struct_conn_angle.value_esd
1 OP2 ? A 0DG 3 ? A 0DG 3 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? D HOH . ? A HOH 231 ? 1_555 82.7 ?
2 OP2 ? A 0DG 3 ? A 0DG 3 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? D HOH . ? A HOH 232 ? 6_444 169.8 ?
3 O ? D HOH . ? A HOH 231 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? D HOH . ? A HOH 232 ? 6_444 87.5 ?
4 OP2 ? A 0DG 3 ? A 0DG 3 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? D HOH . ? A HOH 237 ? 1_555 88.4 ?
5 O ? D HOH . ? A HOH 231 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? D HOH . ? A HOH 237 ? 1_555 77.7 ?
6 O ? D HOH . ? A HOH 232 ? 6_444 MG ? C MG . ? A MG 102 ? 1_555 O ? D HOH . ? A HOH 237 ? 1_555 86.7 ?
7 OP2 ? A 0DG 3 ? A 0DG 3 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? D HOH . ? A HOH 239 ? 1_555 91.5 ?
8 O ? D HOH . ? A HOH 231 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? D HOH . ? A HOH 239 ? 1_555 84.6 ?
9 O ? D HOH . ? A HOH 232 ? 6_444 MG ? C MG . ? A MG 102 ? 1_555 O ? D HOH . ? A HOH 239 ? 1_555 90.4 ?
10 O ? D HOH . ? A HOH 237 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? D HOH . ? A HOH 239 ? 1_555 162.1 ?
11 OP2 ? A 0DG 3 ? A 0DG 3 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? D HOH . ? A HOH 242 ? 6_444 104.3 ?
12 O ? D HOH . ? A HOH 231 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? D HOH . ? A HOH 242 ? 6_444 173.0 ?
13 O ? D HOH . ? A HOH 232 ? 6_444 MG ? C MG . ? A MG 102 ? 1_555 O ? D HOH . ? A HOH 242 ? 6_444 85.5 ?
14 O ? D HOH . ? A HOH 237 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? D HOH . ? A HOH 242 ? 6_444 101.7 ?
15 O ? D HOH . ? A HOH 239 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? D HOH . ? A HOH 242 ? 6_444 95.7 ?
16 O ? D HOH . ? A HOH 211 ? 7_545 MG ? B MG . ? A MG 101 ? 1_555 O ? D HOH . ? A HOH 219 ? 6_444 85.4 ?
17 O ? D HOH . ? A HOH 211 ? 7_545 MG ? B MG . ? A MG 101 ? 1_555 O ? D HOH . ? A HOH 223 ? 6_444 99.0 ?
18 O ? D HOH . ? A HOH 219 ? 6_444 MG ? B MG . ? A MG 101 ? 1_555 O ? D HOH . ? A HOH 223 ? 6_444 80.7 ?
19 O ? D HOH . ? A HOH 211 ? 7_545 MG ? B MG . ? A MG 101 ? 1_555 O ? D HOH . ? A HOH 236 ? 7_545 87.9 ?
20 O ? D HOH . ? A HOH 219 ? 6_444 MG ? B MG . ? A MG 101 ? 1_555 O ? D HOH . ? A HOH 236 ? 7_545 163.7 ?
21 O ? D HOH . ? A HOH 223 ? 6_444 MG ? B MG . ? A MG 101 ? 1_555 O ? D HOH . ? A HOH 236 ? 7_545 85.7 ?
22 O ? D HOH . ? A HOH 211 ? 7_545 MG ? B MG . ? A MG 101 ? 1_555 O ? D HOH . ? A HOH 249 ? 7_545 88.5 ?
23 O ? D HOH . ? A HOH 219 ? 6_444 MG ? B MG . ? A MG 101 ? 1_555 O ? D HOH . ? A HOH 249 ? 7_545 97.5 ?
24 O ? D HOH . ? A HOH 223 ? 6_444 MG ? B MG . ? A MG 101 ? 1_555 O ? D HOH . ? A HOH 249 ? 7_545 172.1 ?
25 O ? D HOH . ? A HOH 236 ? 7_545 MG ? B MG . ? A MG 101 ? 1_555 O ? D HOH . ? A HOH 249 ? 7_545 97.2 ?
26 O ? D HOH . ? A HOH 211 ? 7_545 MG ? B MG . ? A MG 101 ? 1_555 O ? D HOH . ? A HOH 250 ? 6_444 175.4 ?
27 O ? D HOH . ? A HOH 219 ? 6_444 MG ? B MG . ? A MG 101 ? 1_555 O ? D HOH . ? A HOH 250 ? 6_444 98.6 ?
28 O ? D HOH . ? A HOH 223 ? 6_444 MG ? B MG . ? A MG 101 ? 1_555 O ? D HOH . ? A HOH 250 ? 6_444 83.9 ?
29 O ? D HOH . ? A HOH 236 ? 7_545 MG ? B MG . ? A MG 101 ? 1_555 O ? D HOH . ? A HOH 250 ? 6_444 88.8 ?
30 O ? D HOH . ? A HOH 249 ? 7_545 MG ? B MG . ? A MG 101 ? 1_555 O ? D HOH . ? A HOH 250 ? 6_444 88.7 ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2023-09-20
2 'Structure model' 1 1 2023-09-27
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Derived calculations'
2 2 'Structure model' 'Experimental preparation'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 2 'Structure model' exptl_crystal
2 2 'Structure model' pdbx_struct_assembly
3 2 'Structure model' pdbx_struct_assembly_gen
4 2 'Structure model' pdbx_struct_oper_list
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 2 'Structure model' '_exptl_crystal.density_percent_sol'
2 2 'Structure model' '_pdbx_struct_assembly.oligomeric_count'
3 2 'Structure model' '_pdbx_struct_assembly.oligomeric_details'
#
loop_
_software.citation_id
_software.classification
_software.compiler_name
_software.compiler_version
_software.contact_author
_software.contact_author_email
_software.date
_software.description
_software.dependencies
_software.hardware
_software.language
_software.location
_software.mods
_software.name
_software.os
_software.os_version
_software.type
_software.version
_software.pdbx_ordinal
? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0267 1
? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2
? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3
? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4
#
_pdbx_entry_details.entry_id 8F5C
_pdbx_entry_details.nonpolymer_details ?
_pdbx_entry_details.sequence_details ?
_pdbx_entry_details.compound_details ?
_pdbx_entry_details.source_details ?
_pdbx_entry_details.has_ligand_of_interest Y
#
loop_
_pdbx_validate_rmsd_bond.id
_pdbx_validate_rmsd_bond.PDB_model_num
_pdbx_validate_rmsd_bond.auth_atom_id_1
_pdbx_validate_rmsd_bond.auth_asym_id_1
_pdbx_validate_rmsd_bond.auth_comp_id_1
_pdbx_validate_rmsd_bond.auth_seq_id_1
_pdbx_validate_rmsd_bond.PDB_ins_code_1
_pdbx_validate_rmsd_bond.label_alt_id_1
_pdbx_validate_rmsd_bond.auth_atom_id_2
_pdbx_validate_rmsd_bond.auth_asym_id_2
_pdbx_validate_rmsd_bond.auth_comp_id_2
_pdbx_validate_rmsd_bond.auth_seq_id_2
_pdbx_validate_rmsd_bond.PDB_ins_code_2
_pdbx_validate_rmsd_bond.label_alt_id_2
_pdbx_validate_rmsd_bond.bond_value
_pdbx_validate_rmsd_bond.bond_target_value
_pdbx_validate_rmsd_bond.bond_deviation
_pdbx_validate_rmsd_bond.bond_standard_deviation
_pdbx_validate_rmsd_bond.linker_flag
1 1 "C4'" A 0DG 1 ? ? "C3'" A 0DG 1 ? ? 1.461 1.521 -0.060 0.010 N
2 1 "C2'" A 0DG 1 ? ? "C1'" A 0DG 1 ? ? 1.454 1.518 -0.064 0.010 N
3 1 C5 A 0DG 1 ? ? N7 A 0DG 1 ? ? 1.345 1.388 -0.043 0.006 N
4 1 "O3'" A XE6 2 ? ? P A 0DG 3 ? ? 1.697 1.607 0.090 0.012 Y
5 1 P A 0DG 3 ? ? OP1 A 0DG 3 ? ? 1.360 1.485 -0.125 0.017 N
6 1 C8 A 0DG 3 ? ? N9 A 0DG 3 ? ? 1.321 1.374 -0.053 0.007 N
7 1 C2 A 0DG 3 ? ? N2 A 0DG 3 ? ? 1.277 1.341 -0.064 0.010 N
8 1 "O3'" A 0DG 3 ? ? P A 0DT 4 ? ? 1.685 1.607 0.078 0.012 Y
9 1 "C2'" A 0DT 4 ? ? "C1'" A 0DT 4 ? ? 1.421 1.518 -0.097 0.010 N
10 1 C2 A 0DT 4 ? ? N3 A 0DT 4 ? ? 1.322 1.373 -0.051 0.008 N
11 1 "C3'" A 0DA 5 ? ? "C2'" A 0DA 5 ? ? 1.448 1.516 -0.068 0.008 N
12 1 "O3'" A 0DA 5 ? ? P A 0DC 6 ? ? 1.691 1.607 0.084 0.012 Y
13 1 "O3'" A 0DC 6 ? ? P A 0DG 7 ? ? 1.734 1.607 0.127 0.012 Y
14 1 "C4'" A 0DG 7 ? ? "C3'" A 0DG 7 ? ? 1.454 1.521 -0.067 0.010 N
15 1 C6 A 0DG 7 ? ? N1 A 0DG 7 ? ? 1.347 1.391 -0.044 0.007 N
16 1 C8 A 0DG 7 ? ? N9 A 0DG 7 ? ? 1.317 1.374 -0.057 0.007 N
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 "O4'" A 0DG 1 ? ? "C4'" A 0DG 1 ? ? "C3'" A 0DG 1 ? ? 102.00 104.50 -2.50 0.40 N
2 1 C5 A 0DG 1 ? ? C6 A 0DG 1 ? ? N1 A 0DG 1 ? ? 114.63 111.50 3.13 0.50 N
3 1 N1 A 0DG 3 ? ? C2 A 0DG 3 ? ? N3 A 0DG 3 ? ? 119.17 123.90 -4.73 0.60 N
4 1 C2 A 0DG 3 ? ? N3 A 0DG 3 ? ? C4 A 0DG 3 ? ? 117.22 111.90 5.32 0.50 N
5 1 C5 A 0DG 3 ? ? C6 A 0DG 3 ? ? N1 A 0DG 3 ? ? 115.92 111.50 4.42 0.50 N
6 1 "O4'" A 0DT 4 ? ? "C1'" A 0DT 4 ? ? N1 A 0DT 4 ? ? 111.48 108.30 3.18 0.30 N
7 1 C2 A 0DT 4 ? ? N3 A 0DT 4 ? ? C4 A 0DT 4 ? ? 122.92 127.20 -4.28 0.60 N
8 1 N3 A 0DT 4 ? ? C4 A 0DT 4 ? ? C5 A 0DT 4 ? ? 120.41 115.20 5.21 0.60 N
9 1 "O5'" A 0DA 5 ? ? "C5'" A 0DA 5 ? ? "C4'" A 0DA 5 ? ? 103.36 109.40 -6.04 0.80 N
10 1 "O4'" A 0DC 6 ? ? "C4'" A 0DC 6 ? ? "C3'" A 0DC 6 ? ? 101.48 104.50 -3.02 0.40 N
11 1 "C3'" A 0DC 6 ? ? "C2'" A 0DC 6 ? ? "C1'" A 0DC 6 ? ? 97.26 102.40 -5.14 0.80 N
12 1 N3 A 0DC 6 ? ? C4 A 0DC 6 ? ? C5 A 0DC 6 ? ? 119.18 121.90 -2.72 0.40 N
13 1 C8 A 0DG 7 ? ? N9 A 0DG 7 ? ? C4 A 0DG 7 ? ? 108.86 106.40 2.46 0.40 N
14 1 C6 A 0DG 7 ? ? C5 A 0DG 7 ? ? N7 A 0DG 7 ? ? 134.16 130.40 3.76 0.60 N
15 1 C6 A 0DC 8 ? ? N1 A 0DC 8 ? ? C2 A 0DC 8 ? ? 122.94 120.30 2.64 0.40 N
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
0DA C8A C Y N 1
0DA N9A N Y N 2
0DA C4A C Y N 3
0DA C5A C Y N 4
0DA N7A N Y N 5
0DA N3A N Y N 6
0DA C2A C Y N 7
0DA N1A N Y N 8
0DA C6A C Y N 9
0DA N6A N N N 10
0DA "C4'" C N S 11
0DA "O4'" O N N 12
0DA "C3'" C N R 13
0DA "C2'" C N N 14
0DA "C1'" C N S 15
0DA "O3'" O N N 16
0DA "C5'" C N N 17
0DA "O5'" O N N 18
0DA P P N N 19
0DA OP2 O N N 20
0DA OP3 O N N 21
0DA OP1 O N N 22
0DA H8A H N N 23
0DA H2A H N N 24
0DA HN61 H N N 25
0DA HN62 H N N 26
0DA "H4'" H N N 27
0DA "H3'" H N N 28
0DA "H2'" H N N 29
0DA "H2''" H N N 30
0DA "H1'" H N N 31
0DA "HO3'" H N N 32
0DA "H5'" H N N 33
0DA "H5''" H N N 34
0DA H2P H N N 35
0DA HOP3 H N N 36
0DC OP3 O N N 37
0DC P P N N 38
0DC OP1 O N N 39
0DC OP2 O N N 40
0DC "O5'" O N N 41
0DC "C5'" C N N 42
0DC "C4'" C N S 43
0DC "O4'" O N N 44
0DC "C3'" C N R 45
0DC "O3'" O N N 46
0DC "C2'" C N N 47
0DC "C1'" C N S 48
0DC N1 N N N 49
0DC C2 C N N 50
0DC O2 O N N 51
0DC N3 N N N 52
0DC C4 C N N 53
0DC N4 N N N 54
0DC C5 C N N 55
0DC C6 C N N 56
0DC HOP3 H N N 57
0DC HOP2 H N N 58
0DC "H5'" H N N 59
0DC "H5''" H N N 60
0DC "H4'" H N N 61
0DC "H3'" H N N 62
0DC "HO3'" H N N 63
0DC "H2'" H N N 64
0DC "H2''" H N N 65
0DC "H1'" H N N 66
0DC H41 H N N 67
0DC H42 H N N 68
0DC H5 H N N 69
0DC H6 H N N 70
0DG OP3 O N N 71
0DG P P N N 72
0DG OP1 O N N 73
0DG OP2 O N N 74
0DG "O5'" O N N 75
0DG "C5'" C N N 76
0DG "C4'" C N S 77
0DG "O4'" O N N 78
0DG "C3'" C N R 79
0DG "O3'" O N N 80
0DG "C2'" C N N 81
0DG "C1'" C N S 82
0DG N9 N Y N 83
0DG C8 C Y N 84
0DG N7 N Y N 85
0DG C5 C Y N 86
0DG C6 C N N 87
0DG O6 O N N 88
0DG N1 N N N 89
0DG C2 C N N 90
0DG N2 N N N 91
0DG N3 N N N 92
0DG C4 C Y N 93
0DG HOP3 H N N 94
0DG HOP2 H N N 95
0DG "H5'" H N N 96
0DG "H5''" H N N 97
0DG "H4'" H N N 98
0DG "H3'" H N N 99
0DG "HO3'" H N N 100
0DG "H2'" H N N 101
0DG "H2''" H N N 102
0DG "H1'" H N N 103
0DG H8 H N N 104
0DG H1 H N N 105
0DG H21 H N N 106
0DG H22 H N N 107
0DT OP3 O N N 108
0DT P P N N 109
0DT OP1 O N N 110
0DT OP2 O N N 111
0DT "O5'" O N N 112
0DT "C5'" C N N 113
0DT "C4'" C N S 114
0DT "O4'" O N N 115
0DT "C3'" C N R 116
0DT "O3'" O N N 117
0DT "C2'" C N N 118
0DT "C1'" C N S 119
0DT N1 N N N 120
0DT C2 C N N 121
0DT O2 O N N 122
0DT N3 N N N 123
0DT C4 C N N 124
0DT O4 O N N 125
0DT C5 C N N 126
0DT C5M C N N 127
0DT C6 C N N 128
0DT HOP3 H N N 129
0DT HOP2 H N N 130
0DT "H5'" H N N 131
0DT "H5''" H N N 132
0DT "H4'" H N N 133
0DT "H3'" H N N 134
0DT "HO3'" H N N 135
0DT "H2'" H N N 136
0DT "H2''" H N N 137
0DT "H1'" H N N 138
0DT H3 H N N 139
0DT H71 H N N 140
0DT H72 H N N 141
0DT H73 H N N 142
0DT H6 H N N 143
HOH O O N N 144
HOH H1 H N N 145
HOH H2 H N N 146
MG MG MG N N 147
XE6 O2 O N N 148
XE6 C2 C N N 149
XE6 N3 N N N 150
XE6 C4 C N N 151
XE6 N4 N N N 152
XE6 C5 C N N 153
XE6 C6 C N N 154
XE6 N1 N N N 155
XE6 "C1'" C N S 156
XE6 "O4'" O N N 157
XE6 "C4'" C N S 158
XE6 "C5'" C N N 159
XE6 "O5'" O N N 160
XE6 P P N N 161
XE6 OP1 O N N 162
XE6 OP2 O N N 163
XE6 "C3'" C N S 164
XE6 "O3'" O N N 165
XE6 "C2'" C N S 166
XE6 "O2'" O N N 167
XE6 C22 C N N 168
XE6 H1 H N N 169
XE6 H2 H N N 170
XE6 H3 H N N 171
XE6 H4 H N N 172
XE6 H5 H N N 173
XE6 H6 H N N 174
XE6 H7 H N N 175
XE6 H8 H N N 176
XE6 H10 H N N 177
XE6 H11 H N N 178
XE6 H12 H N N 179
XE6 H13 H N N 180
XE6 H14 H N N 181
XE6 H15 H N N 182
XE6 H16 H N N 183
XE6 OP3 O N N 184
XE6 H9 H N N 185
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
0DA C8A N9A sing Y N 1
0DA C8A N7A doub Y N 2
0DA N9A C4A sing Y N 3
0DA N9A "C1'" sing N N 4
0DA C4A C5A doub Y N 5
0DA C4A N3A sing Y N 6
0DA C5A N7A sing Y N 7
0DA C5A C6A sing Y N 8
0DA N3A C2A doub Y N 9
0DA C2A N1A sing Y N 10
0DA N1A C6A doub Y N 11
0DA C6A N6A sing N N 12
0DA "C4'" "O4'" sing N N 13
0DA "C4'" "C3'" sing N N 14
0DA "O4'" "C1'" sing N N 15
0DA "C3'" "C2'" sing N N 16
0DA "C2'" "C1'" sing N N 17
0DA "C3'" "O3'" sing N N 18
0DA "C4'" "C5'" sing N N 19
0DA "C5'" "O5'" sing N N 20
0DA "O5'" P sing N N 21
0DA P OP2 sing N N 22
0DA P OP3 sing N N 23
0DA P OP1 doub N N 24
0DA C8A H8A sing N N 25
0DA C2A H2A sing N N 26
0DA N6A HN61 sing N N 27
0DA N6A HN62 sing N N 28
0DA "C4'" "H4'" sing N N 29
0DA "C3'" "H3'" sing N N 30
0DA "C2'" "H2'" sing N N 31
0DA "C2'" "H2''" sing N N 32
0DA "C1'" "H1'" sing N N 33
0DA "O3'" "HO3'" sing N N 34
0DA "C5'" "H5'" sing N N 35
0DA "C5'" "H5''" sing N N 36
0DA OP2 H2P sing N N 37
0DA OP3 HOP3 sing N N 38
0DC OP3 P sing N N 39
0DC OP3 HOP3 sing N N 40
0DC P OP1 doub N N 41
0DC P OP2 sing N N 42
0DC P "O5'" sing N N 43
0DC OP2 HOP2 sing N N 44
0DC "O5'" "C5'" sing N N 45
0DC "C5'" "C4'" sing N N 46
0DC "C5'" "H5'" sing N N 47
0DC "C5'" "H5''" sing N N 48
0DC "C4'" "O4'" sing N N 49
0DC "C4'" "C3'" sing N N 50
0DC "C4'" "H4'" sing N N 51
0DC "O4'" "C1'" sing N N 52
0DC "C3'" "O3'" sing N N 53
0DC "C3'" "C2'" sing N N 54
0DC "C3'" "H3'" sing N N 55
0DC "O3'" "HO3'" sing N N 56
0DC "C2'" "C1'" sing N N 57
0DC "C2'" "H2'" sing N N 58
0DC "C2'" "H2''" sing N N 59
0DC "C1'" N1 sing N N 60
0DC "C1'" "H1'" sing N N 61
0DC N1 C2 sing N N 62
0DC N1 C6 sing N N 63
0DC C2 O2 doub N N 64
0DC C2 N3 sing N N 65
0DC N3 C4 doub N N 66
0DC C4 N4 sing N N 67
0DC C4 C5 sing N N 68
0DC N4 H41 sing N N 69
0DC N4 H42 sing N N 70
0DC C5 C6 doub N N 71
0DC C5 H5 sing N N 72
0DC C6 H6 sing N N 73
0DG OP3 P sing N N 74
0DG OP3 HOP3 sing N N 75
0DG P OP1 doub N N 76
0DG P OP2 sing N N 77
0DG P "O5'" sing N N 78
0DG OP2 HOP2 sing N N 79
0DG "O5'" "C5'" sing N N 80
0DG "C5'" "C4'" sing N N 81
0DG "C5'" "H5'" sing N N 82
0DG "C5'" "H5''" sing N N 83
0DG "C4'" "O4'" sing N N 84
0DG "C4'" "C3'" sing N N 85
0DG "C4'" "H4'" sing N N 86
0DG "O4'" "C1'" sing N N 87
0DG "C3'" "O3'" sing N N 88
0DG "C3'" "C2'" sing N N 89
0DG "C3'" "H3'" sing N N 90
0DG "O3'" "HO3'" sing N N 91
0DG "C2'" "C1'" sing N N 92
0DG "C2'" "H2'" sing N N 93
0DG "C2'" "H2''" sing N N 94
0DG "C1'" N9 sing N N 95
0DG "C1'" "H1'" sing N N 96
0DG N9 C8 sing Y N 97
0DG N9 C4 sing Y N 98
0DG C8 N7 doub Y N 99
0DG C8 H8 sing N N 100
0DG N7 C5 sing Y N 101
0DG C5 C6 sing N N 102
0DG C5 C4 doub Y N 103
0DG C6 O6 doub N N 104
0DG C6 N1 sing N N 105
0DG N1 C2 sing N N 106
0DG N1 H1 sing N N 107
0DG C2 N2 sing N N 108
0DG C2 N3 doub N N 109
0DG N2 H21 sing N N 110
0DG N2 H22 sing N N 111
0DG N3 C4 sing N N 112
0DT OP3 P sing N N 113
0DT OP3 HOP3 sing N N 114
0DT P OP1 doub N N 115
0DT P OP2 sing N N 116
0DT P "O5'" sing N N 117
0DT OP2 HOP2 sing N N 118
0DT "O5'" "C5'" sing N N 119
0DT "C5'" "C4'" sing N N 120
0DT "C5'" "H5'" sing N N 121
0DT "C5'" "H5''" sing N N 122
0DT "C4'" "O4'" sing N N 123
0DT "C4'" "C3'" sing N N 124
0DT "C4'" "H4'" sing N N 125
0DT "O4'" "C1'" sing N N 126
0DT "C3'" "O3'" sing N N 127
0DT "C3'" "C2'" sing N N 128
0DT "C3'" "H3'" sing N N 129
0DT "O3'" "HO3'" sing N N 130
0DT "C2'" "C1'" sing N N 131
0DT "C2'" "H2'" sing N N 132
0DT "C2'" "H2''" sing N N 133
0DT "C1'" N1 sing N N 134
0DT "C1'" "H1'" sing N N 135
0DT N1 C2 sing N N 136
0DT N1 C6 sing N N 137
0DT C2 O2 doub N N 138
0DT C2 N3 sing N N 139
0DT N3 C4 sing N N 140
0DT N3 H3 sing N N 141
0DT C4 O4 doub N N 142
0DT C4 C5 sing N N 143
0DT C5 C5M sing N N 144
0DT C5 C6 doub N N 145
0DT C5M H71 sing N N 146
0DT C5M H72 sing N N 147
0DT C5M H73 sing N N 148
0DT C6 H6 sing N N 149
HOH O H1 sing N N 150
HOH O H2 sing N N 151
XE6 "O3'" "C3'" sing N N 152
XE6 C22 "O2'" sing N N 153
XE6 "O2'" "C2'" sing N N 154
XE6 "C3'" "C2'" sing N N 155
XE6 "C3'" "C4'" sing N N 156
XE6 "C2'" "C1'" sing N N 157
XE6 "C4'" "C5'" sing N N 158
XE6 "C4'" "O4'" sing N N 159
XE6 "C5'" "O5'" sing N N 160
XE6 OP2 P sing N N 161
XE6 "C1'" "O4'" sing N N 162
XE6 "C1'" N1 sing N N 163
XE6 "O5'" P sing N N 164
XE6 O2 C2 doub N N 165
XE6 N1 C2 sing N N 166
XE6 N1 C6 sing N N 167
XE6 P OP1 doub N N 168
XE6 C2 N3 sing N N 169
XE6 C6 C5 doub N N 170
XE6 N3 C4 doub N N 171
XE6 C5 C4 sing N N 172
XE6 C4 N4 sing N N 173
XE6 N4 H1 sing N N 174
XE6 N4 H2 sing N N 175
XE6 C5 H3 sing N N 176
XE6 C6 H4 sing N N 177
XE6 "C1'" H5 sing N N 178
XE6 "C4'" H6 sing N N 179
XE6 "C5'" H7 sing N N 180
XE6 "C5'" H8 sing N N 181
XE6 OP2 H10 sing N N 182
XE6 "C3'" H11 sing N N 183
XE6 "O3'" H12 sing N N 184
XE6 "C2'" H13 sing N N 185
XE6 C22 H14 sing N N 186
XE6 C22 H15 sing N N 187
XE6 C22 H16 sing N N 188
XE6 P OP3 sing N N 189
XE6 OP3 H9 sing N N 190
#
_ndb_struct_conf_na.entry_id 8F5C
_ndb_struct_conf_na.feature 'z-form double helix'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A 0DG 1 1_555 A 0DC 8 8_555 0.277 -0.097 -0.267 -12.221 12.325 1.955 1 A_0DG1:0DC8_A A 1 ? A 8 ? 19 1
1 A 0DG 3 1_555 A 0DC 6 8_555 0.274 -0.160 0.197 -3.857 13.106 -0.309 2 A_0DG3:0DC6_A A 3 ? A 6 ? 19 1
1 A 0DG 1 8_555 A 0DC 8 1_555 0.277 -0.097 -0.267 -12.221 12.325 1.955 3 A_0DG1:0DC8_A A 1 ? A 8 ? 19 1
1 A 0DG 3 8_555 A 0DC 6 1_555 0.274 -0.160 0.197 -3.857 13.106 -0.309 4 A_0DG3:0DC6_A A 3 ? A 6 ? 19 1
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A 0DG 1 1_555 A 0DC 8 8_555 A 0DG 3 1_555 A 0DC 6 8_555 -0.555 -2.756 6.138 -4.184 -24.694 -59.923 4.413 -0.830 4.756 23.640
-4.005 -64.495 1 AA_0DG10DG3:0DC60DC8_AA A 1 ? A 8 ? A 3 ? A 6 ?
1 A 0DG 1 8_555 A 0DC 8 1_555 A 0DG 3 8_555 A 0DC 6 1_555 -0.555 -2.756 6.138 -4.184 -24.694 -59.923 4.413 -0.830 4.756 23.640
-4.005 -64.495 2 AA_0DG10DG3:0DC60DC8_AA A 1 ? A 8 ? A 3 ? A 6 ?
#
_pdbx_audit_support.funding_organization 'Not funded'
_pdbx_audit_support.country ?
_pdbx_audit_support.grant_number ?
_pdbx_audit_support.ordinal 1
#
_pdbx_entity_instance_feature.ordinal 1
_pdbx_entity_instance_feature.comp_id XE6
_pdbx_entity_instance_feature.asym_id ?
_pdbx_entity_instance_feature.seq_num ?
_pdbx_entity_instance_feature.auth_comp_id XE6
_pdbx_entity_instance_feature.auth_asym_id ?
_pdbx_entity_instance_feature.auth_seq_num ?
_pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION'
_pdbx_entity_instance_feature.details ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2 'MAGNESIUM ION' MG
3 water HOH
#
_pdbx_struct_assembly_auth_evidence.id 1
_pdbx_struct_assembly_auth_evidence.assembly_id 1
_pdbx_struct_assembly_auth_evidence.experimental_support none
_pdbx_struct_assembly_auth_evidence.details ?
#