data_8AAD
#
_entry.id 8AAD
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.384
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 8AAD pdb_00008aad 10.2210/pdb8aad/pdb
WWPDB D_1292123896 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2022-12-07
2 'Structure model' 1 1 2024-01-31
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Data collection'
2 2 'Structure model' 'Refinement description'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 2 'Structure model' chem_comp_atom
2 2 'Structure model' chem_comp_bond
3 2 'Structure model' pdbx_initial_refinement_model
#
_pdbx_database_status.status_code REL
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.entry_id 8AAD
_pdbx_database_status.recvd_initial_deposition_date 2022-07-01
_pdbx_database_status.SG_entry N
_pdbx_database_status.deposit_site PDBE
_pdbx_database_status.process_site PDBE
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.pdb_format_compatible Y
#
loop_
_pdbx_database_related.db_name
_pdbx_database_related.details
_pdbx_database_related.db_id
_pdbx_database_related.content_type
PDB . 6S15 unspecified
PDB . 7ZUR unspecified
#
loop_
_pdbx_contact_author.id
_pdbx_contact_author.email
_pdbx_contact_author.name_first
_pdbx_contact_author.name_last
_pdbx_contact_author.name_mi
_pdbx_contact_author.role
_pdbx_contact_author.identifier_ORCID
2 carla.bazzicalupi@unifi.it Carla Bazzicalupi ? 'principal investigator/group leader' 0000-0003-4602-0405
3 marta.ferraroni@unifi.it Marta Ferraroni ? 'principal investigator/group leader' 0000-0001-7258-738X
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
_audit_author.identifier_ORCID
'Ferraroni, M.' 1 ?
'Bazzicalupi, C.' 2 ?
'Gratteri, P.' 3 ?
'Papi, F.' 4 ?
#
_citation.abstract ?
_citation.abstract_id_CAS ?
_citation.book_id_ISBN ?
_citation.book_publisher ?
_citation.book_publisher_city ?
_citation.book_title ?
_citation.coordinate_linkage ?
_citation.country CH
_citation.database_id_Medline ?
_citation.details ?
_citation.id primary
_citation.journal_abbrev 'Int J Mol Sci'
_citation.journal_id_ASTM ?
_citation.journal_id_CSD ?
_citation.journal_id_ISSN 1422-0067
_citation.journal_full ?
_citation.journal_issue ?
_citation.journal_volume 23
_citation.language ?
_citation.page_first ?
_citation.page_last ?
_citation.title
;Probing the Efficiency of 13-Pyridylalkyl Berberine Derivatives to Human Telomeric G-Quadruplexes Binding: Spectroscopic, Solid State and In Silico Analysis.
;
_citation.year 2022
_citation.database_id_CSD ?
_citation.pdbx_database_id_DOI 10.3390/ijms232214061
_citation.pdbx_database_id_PubMed 36430540
_citation.pdbx_database_id_patent ?
_citation.unpublished_flag ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Bazzicalupi, C.' 1 0000-0003-4602-0405
primary 'Bonardi, A.' 2 0000-0002-5520-740X
primary 'Biver, T.' 3 0000-0001-8512-8422
primary 'Ferraroni, M.' 4 0000-0001-7258-738X
primary 'Papi, F.' 5 ?
primary 'Savastano, M.' 6 0000-0002-9780-7542
primary 'Lombardi, P.' 7 0000-0002-7971-7404
primary 'Gratteri, P.' 8 0000-0002-9137-2509
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn 'DNA TAGGGTTAGGGT' 3773.462 1 ? ? ? ?
2 non-polymer syn 'POTASSIUM ION' 39.098 2 ? ? ? ?
3 non-polymer syn
;16,17-dimethoxy-21-(2-pyridin-4-ylethyl)-5,7-dioxa-13$l^{4}-azapentacyclo[11.8.0.0^{2,10}.0^{4,8}.0^{15,20}]henicosa-1(13),2,4(8),9,14,16,18,20-octaene
;
441.498 1 ? ? ? ?
4 water nat water 18.015 5 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type polydeoxyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code '(DT)(DA)(DG)(DG)(DG)(DT)(DT)(DA)(DG)(DG)(DG)(DT)'
_entity_poly.pdbx_seq_one_letter_code_can TAGGGTTAGGGT
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2 'POTASSIUM ION' K
3
;16,17-dimethoxy-21-(2-pyridin-4-ylethyl)-5,7-dioxa-13$l^{4}-azapentacyclo[11.8.0.0^{2,10}.0^{4,8}.0^{15,20}]henicosa-1(13),2,4(8),9,14,16,18,20-octaene
;
LKO
4 water HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 DT n
1 2 DA n
1 3 DG n
1 4 DG n
1 5 DG n
1 6 DT n
1 7 DT n
1 8 DA n
1 9 DG n
1 10 DG n
1 11 DG n
1 12 DT n
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num 1
_pdbx_entity_src_syn.pdbx_end_seq_num 12
_pdbx_entity_src_syn.organism_scientific 'Homo sapiens'
_pdbx_entity_src_syn.organism_common_name ?
_pdbx_entity_src_syn.ncbi_taxonomy_id 9606
_pdbx_entity_src_syn.details ?
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221
DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208
HOH non-polymer . WATER ? 'H2 O' 18.015
K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098
LKO non-polymer .
;16,17-dimethoxy-21-(2-pyridin-4-ylethyl)-5,7-dioxa-13$l^{4}-azapentacyclo[11.8.0.0^{2,10}.0^{4,8}.0^{15,20}]henicosa-1(13),2,4(8),9,14,16,18,20-octaene
;
? 'C27 H25 N2 O4 1' 441.498
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 DT 1 1 1 DT DT A . n
A 1 2 DA 2 2 2 DA DA A . n
A 1 3 DG 3 3 3 DG DG A . n
A 1 4 DG 4 4 4 DG DG A . n
A 1 5 DG 5 5 5 DG DG A . n
A 1 6 DT 6 6 6 DT DT A . n
A 1 7 DT 7 7 7 DT DT A . n
A 1 8 DA 8 8 8 DA DA A . n
A 1 9 DG 9 9 9 DG DG A . n
A 1 10 DG 10 10 10 DG DG A . n
A 1 11 DG 11 11 11 DG DG A . n
A 1 12 DT 12 12 12 DT DT A . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 K 1 101 1 K K A .
C 2 K 1 102 2 K K A .
D 3 LKO 1 103 1 LKO BNX A .
E 4 HOH 1 201 1 HOH HOH A .
E 4 HOH 2 202 6 HOH HOH A .
E 4 HOH 3 203 5 HOH HOH A .
E 4 HOH 4 204 4 HOH HOH A .
E 4 HOH 5 205 3 HOH HOH A .
#
loop_
_pdbx_unobs_or_zero_occ_atoms.id
_pdbx_unobs_or_zero_occ_atoms.PDB_model_num
_pdbx_unobs_or_zero_occ_atoms.polymer_flag
_pdbx_unobs_or_zero_occ_atoms.occupancy_flag
_pdbx_unobs_or_zero_occ_atoms.auth_asym_id
_pdbx_unobs_or_zero_occ_atoms.auth_comp_id
_pdbx_unobs_or_zero_occ_atoms.auth_seq_id
_pdbx_unobs_or_zero_occ_atoms.PDB_ins_code
_pdbx_unobs_or_zero_occ_atoms.auth_atom_id
_pdbx_unobs_or_zero_occ_atoms.label_alt_id
_pdbx_unobs_or_zero_occ_atoms.label_asym_id
_pdbx_unobs_or_zero_occ_atoms.label_comp_id
_pdbx_unobs_or_zero_occ_atoms.label_seq_id
_pdbx_unobs_or_zero_occ_atoms.label_atom_id
1 1 Y 1 A DT 1 ? "O5'" ? A DT 1 "O5'"
2 1 Y 1 A DT 1 ? C7 ? A DT 1 C7
3 1 Y 1 A DT 12 ? "C5'" ? A DT 12 "C5'"
4 1 Y 1 A DT 12 ? "C4'" ? A DT 12 "C4'"
5 1 Y 1 A DT 12 ? "O4'" ? A DT 12 "O4'"
6 1 Y 1 A DT 12 ? "C3'" ? A DT 12 "C3'"
7 1 Y 1 A DT 12 ? "O3'" ? A DT 12 "O3'"
8 1 Y 1 A DT 12 ? "C2'" ? A DT 12 "C2'"
9 1 Y 1 A DT 12 ? "C1'" ? A DT 12 "C1'"
10 1 Y 1 A DT 12 ? N1 ? A DT 12 N1
11 1 Y 1 A DT 12 ? C2 ? A DT 12 C2
12 1 Y 1 A DT 12 ? O2 ? A DT 12 O2
13 1 Y 1 A DT 12 ? N3 ? A DT 12 N3
14 1 Y 1 A DT 12 ? C4 ? A DT 12 C4
15 1 Y 1 A DT 12 ? O4 ? A DT 12 O4
16 1 Y 1 A DT 12 ? C5 ? A DT 12 C5
17 1 Y 1 A DT 12 ? C7 ? A DT 12 C7
18 1 Y 1 A DT 12 ? C6 ? A DT 12 C6
#
loop_
_software.citation_id
_software.classification
_software.compiler_name
_software.compiler_version
_software.contact_author
_software.contact_author_email
_software.date
_software.description
_software.dependencies
_software.hardware
_software.language
_software.location
_software.mods
_software.name
_software.os
_software.os_version
_software.type
_software.version
_software.pdbx_ordinal
? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0189 1
? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2
? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 3
? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.27 4
? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5
#
_cell.angle_alpha 90.000
_cell.angle_alpha_esd ?
_cell.angle_beta 90.000
_cell.angle_beta_esd ?
_cell.angle_gamma 90.000
_cell.angle_gamma_esd ?
_cell.entry_id 8AAD
_cell.details ?
_cell.formula_units_Z ?
_cell.length_a 41.680
_cell.length_a_esd ?
_cell.length_b 41.680
_cell.length_b_esd ?
_cell.length_c 34.310
_cell.length_c_esd ?
_cell.volume ?
_cell.volume_esd ?
_cell.Z_PDB 8
_cell.reciprocal_angle_alpha ?
_cell.reciprocal_angle_beta ?
_cell.reciprocal_angle_gamma ?
_cell.reciprocal_angle_alpha_esd ?
_cell.reciprocal_angle_beta_esd ?
_cell.reciprocal_angle_gamma_esd ?
_cell.reciprocal_length_a ?
_cell.reciprocal_length_b ?
_cell.reciprocal_length_c ?
_cell.reciprocal_length_a_esd ?
_cell.reciprocal_length_b_esd ?
_cell.reciprocal_length_c_esd ?
_cell.pdbx_unique_axis ?
_cell.pdbx_esd_method ?
#
_symmetry.entry_id 8AAD
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 94
_symmetry.space_group_name_Hall ?
_symmetry.space_group_name_H-M 'P 42 21 2'
_symmetry.pdbx_full_space_group_name_H-M ?
#
_exptl.absorpt_coefficient_mu ?
_exptl.absorpt_correction_T_max ?
_exptl.absorpt_correction_T_min ?
_exptl.absorpt_correction_type ?
_exptl.absorpt_process_details ?
_exptl.entry_id 8AAD
_exptl.crystals_number 1
_exptl.details ?
_exptl.method 'X-RAY DIFFRACTION'
_exptl.method_details ?
#
_exptl_crystal.colour ?
_exptl_crystal.density_diffrn ?
_exptl_crystal.density_Matthews 1.90
_exptl_crystal.density_method ?
_exptl_crystal.density_percent_sol 56.40
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.id 1
_exptl_crystal.preparation ?
_exptl_crystal.size_max ?
_exptl_crystal.size_mid ?
_exptl_crystal.size_min ?
_exptl_crystal.size_rad ?
_exptl_crystal.colour_lustre ?
_exptl_crystal.colour_modifier ?
_exptl_crystal.colour_primary ?
_exptl_crystal.density_meas ?
_exptl_crystal.density_meas_esd ?
_exptl_crystal.density_meas_gt ?
_exptl_crystal.density_meas_lt ?
_exptl_crystal.density_meas_temp ?
_exptl_crystal.density_meas_temp_esd ?
_exptl_crystal.density_meas_temp_gt ?
_exptl_crystal.density_meas_temp_lt ?
_exptl_crystal.pdbx_crystal_image_url ?
_exptl_crystal.pdbx_crystal_image_format ?
_exptl_crystal.pdbx_mosaicity ?
_exptl_crystal.pdbx_mosaicity_esd ?
_exptl_crystal.pdbx_mosaic_method ?
_exptl_crystal.pdbx_mosaic_block_size ?
_exptl_crystal.pdbx_mosaic_block_size_esd ?
#
_exptl_crystal_grow.apparatus ?
_exptl_crystal_grow.atmosphere ?
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.details ?
_exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP'
_exptl_crystal_grow.method_ref ?
_exptl_crystal_grow.pH 6.5
_exptl_crystal_grow.pressure ?
_exptl_crystal_grow.pressure_esd ?
_exptl_crystal_grow.seeding ?
_exptl_crystal_grow.seeding_ref ?
_exptl_crystal_grow.temp 296
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.temp_esd ?
_exptl_crystal_grow.time ?
_exptl_crystal_grow.pdbx_details 'NaCacodylate, NaI, MPD'
_exptl_crystal_grow.pdbx_pH_range ?
#
_diffrn.ambient_environment ?
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.ambient_temp_esd ?
_diffrn.crystal_id 1
_diffrn.crystal_support ?
_diffrn.crystal_treatment ?
_diffrn.details ?
_diffrn.id 1
_diffrn.ambient_pressure ?
_diffrn.ambient_pressure_esd ?
_diffrn.ambient_pressure_gt ?
_diffrn.ambient_pressure_lt ?
_diffrn.ambient_temp_gt ?
_diffrn.ambient_temp_lt ?
_diffrn.pdbx_serial_crystal_experiment N
#
_diffrn_detector.details ?
_diffrn_detector.detector PIXEL
_diffrn_detector.diffrn_id 1
_diffrn_detector.type 'DECTRIS PILATUS3 6M'
_diffrn_detector.area_resol_mean ?
_diffrn_detector.dtime ?
_diffrn_detector.pdbx_frames_total ?
_diffrn_detector.pdbx_collection_time_total ?
_diffrn_detector.pdbx_collection_date 2016-12-12
_diffrn_detector.pdbx_frequency ?
#
_diffrn_radiation.collimation ?
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.filter_edge ?
_diffrn_radiation.inhomogeneity ?
_diffrn_radiation.monochromator ?
_diffrn_radiation.polarisn_norm ?
_diffrn_radiation.polarisn_ratio ?
_diffrn_radiation.probe ?
_diffrn_radiation.type ?
_diffrn_radiation.xray_symbol ?
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.pdbx_wavelength_list ?
_diffrn_radiation.pdbx_wavelength ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_analyzer ?
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 0.97264
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.current ?
_diffrn_source.details ?
_diffrn_source.diffrn_id 1
_diffrn_source.power ?
_diffrn_source.size ?
_diffrn_source.source SYNCHROTRON
_diffrn_source.target ?
_diffrn_source.type 'ESRF BEAMLINE ID30B'
_diffrn_source.voltage ?
_diffrn_source.take-off_angle ?
_diffrn_source.pdbx_wavelength_list 0.97264
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_synchrotron_beamline ID30B
_diffrn_source.pdbx_synchrotron_site ESRF
#
_reflns.B_iso_Wilson_estimate ?
_reflns.entry_id 8AAD
_reflns.data_reduction_details ?
_reflns.data_reduction_method ?
_reflns.d_resolution_high 2.04
_reflns.d_resolution_low 29.470
_reflns.details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.number_all ?
_reflns.number_obs 2137
_reflns.observed_criterion ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.observed_criterion_I_max ?
_reflns.observed_criterion_I_min ?
_reflns.observed_criterion_sigma_F ?
_reflns.observed_criterion_sigma_I ?
_reflns.percent_possible_obs 99.8
_reflns.R_free_details ?
_reflns.Rmerge_F_all ?
_reflns.Rmerge_F_obs ?
_reflns.Friedel_coverage ?
_reflns.number_gt ?
_reflns.threshold_expression ?
_reflns.pdbx_redundancy 22.8
_reflns.pdbx_Rmerge_I_obs ?
_reflns.pdbx_Rmerge_I_all ?
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_av_sigmaI ?
_reflns.pdbx_netI_over_sigmaI 25.99
_reflns.pdbx_res_netI_over_av_sigmaI_2 ?
_reflns.pdbx_res_netI_over_sigmaI_2 ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_d_res_high_opt ?
_reflns.pdbx_d_res_low_opt ?
_reflns.pdbx_d_res_opt_method ?
_reflns.phase_calculation_details ?
_reflns.pdbx_Rrim_I_all ?
_reflns.pdbx_Rpim_I_all ?
_reflns.pdbx_d_opt ?
_reflns.pdbx_number_measured_all ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
_reflns.pdbx_CC_half 1.0
_reflns.pdbx_CC_star ?
_reflns.pdbx_R_split ?
_reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ?
_reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ?
_reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ?
_reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ?
_reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ?
_reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ?
_reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ?
_reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ?
_reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ?
_reflns.pdbx_aniso_diffraction_limit_1 ?
_reflns.pdbx_aniso_diffraction_limit_2 ?
_reflns.pdbx_aniso_diffraction_limit_3 ?
_reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ?
_reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ?
_reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ?
_reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ?
_reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ?
_reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ?
_reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ?
_reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ?
_reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ?
_reflns.pdbx_aniso_B_tensor_eigenvalue_1 ?
_reflns.pdbx_aniso_B_tensor_eigenvalue_2 ?
_reflns.pdbx_aniso_B_tensor_eigenvalue_3 ?
_reflns.pdbx_orthogonalization_convention ?
_reflns.pdbx_percent_possible_ellipsoidal ?
_reflns.pdbx_percent_possible_spherical ?
_reflns.pdbx_percent_possible_ellipsoidal_anomalous ?
_reflns.pdbx_percent_possible_spherical_anomalous ?
_reflns.pdbx_redundancy_anomalous ?
_reflns.pdbx_CC_half_anomalous ?
_reflns.pdbx_absDiff_over_sigma_anomalous ?
_reflns.pdbx_percent_possible_anomalous ?
_reflns.pdbx_observed_signal_threshold ?
_reflns.pdbx_signal_type ?
_reflns.pdbx_signal_details ?
_reflns.pdbx_signal_software_id ?
_reflns.pdbx_CC_split_method ?
#
loop_
_reflns_shell.d_res_high
_reflns_shell.d_res_low
_reflns_shell.meanI_over_sigI_all
_reflns_shell.meanI_over_sigI_obs
_reflns_shell.number_measured_all
_reflns_shell.number_measured_obs
_reflns_shell.number_possible
_reflns_shell.number_unique_all
_reflns_shell.number_unique_obs
_reflns_shell.percent_possible_all
_reflns_shell.percent_possible_obs
_reflns_shell.Rmerge_F_all
_reflns_shell.Rmerge_F_obs
_reflns_shell.Rmerge_I_all
_reflns_shell.Rmerge_I_obs
_reflns_shell.meanI_over_sigI_gt
_reflns_shell.meanI_over_uI_all
_reflns_shell.meanI_over_uI_gt
_reflns_shell.number_measured_gt
_reflns_shell.number_unique_gt
_reflns_shell.percent_possible_gt
_reflns_shell.Rmerge_F_gt
_reflns_shell.Rmerge_I_gt
_reflns_shell.pdbx_redundancy
_reflns_shell.pdbx_Rsym_value
_reflns_shell.pdbx_chi_squared
_reflns_shell.pdbx_netI_over_sigmaI_all
_reflns_shell.pdbx_netI_over_sigmaI_obs
_reflns_shell.pdbx_Rrim_I_all
_reflns_shell.pdbx_Rpim_I_all
_reflns_shell.pdbx_rejects
_reflns_shell.pdbx_ordinal
_reflns_shell.pdbx_diffrn_id
_reflns_shell.pdbx_CC_half
_reflns_shell.pdbx_CC_star
_reflns_shell.pdbx_R_split
_reflns_shell.pdbx_percent_possible_ellipsoidal
_reflns_shell.pdbx_percent_possible_spherical
_reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous
_reflns_shell.pdbx_percent_possible_spherical_anomalous
_reflns_shell.pdbx_redundancy_anomalous
_reflns_shell.pdbx_CC_half_anomalous
_reflns_shell.pdbx_absDiff_over_sigma_anomalous
_reflns_shell.pdbx_percent_possible_anomalous
2.04 2.17 ? 12.9 ? ? ? ? 336 99.4 ? ? ? ? ? ? ? ? ? ? ? ? ? 23.6 ? ? ? ? ? ? ? 1 1 0.994 ? ? ? ? ? ? ? ? ? ?
2.17 2.32 ? 16.38 ? ? ? ? 312 100.000 ? ? ? ? ? ? ? ? ? ? ? ? ? 23.2 ? ? ? ? ? ? ? 2 1 0.998 ? ? ? ? ? ? ? ? ? ?
2.32 2.50 ? 20.26 ? ? ? ? 288 100.000 ? ? ? ? ? ? ? ? ? ? ? ? ? 24.6 ? ? ? ? ? ? ? 3 1 0.997 ? ? ? ? ? ? ? ? ? ?
2.50 2.74 ? 26.88 ? ? ? ? 270 100.0 ? ? ? ? ? ? ? ? ? ? ? ? ? 24.3 ? ? ? ? ? ? ? 4 1 0.998 ? ? ? ? ? ? ? ? ? ?
2.74 3.06 ? 30.5 ? ? ? ? 247 100.000 ? ? ? ? ? ? ? ? ? ? ? ? ? 21.8 ? ? ? ? ? ? ? 5 1 0.998 ? ? ? ? ? ? ? ? ? ?
3.06 3.52 ? 36.01 ? ? ? ? 227 100.000 ? ? ? ? ? ? ? ? ? ? ? ? ? 22.8 ? ? ? ? ? ? ? 6 1 0.998 ? ? ? ? ? ? ? ? ? ?
3.52 4.30 ? 37.03 ? ? ? ? 198 99.5 ? ? ? ? ? ? ? ? ? ? ? ? ? 20.79 ? ? ? ? ? ? ? 7 1 0.999 ? ? ? ? ? ? ? ? ? ?
4.30 6.02 ? 40.01 ? ? ? ? 157 100.000 ? ? ? ? ? ? ? ? ? ? ? ? ? 21.22 ? ? ? ? ? ? ? 8 1 0.993 ? ? ? ? ? ? ? ? ? ?
6.02 29.470 ? 36.07 ? ? ? ? 102 98.1 ? ? ? ? ? ? ? ? ? ? ? ? ? 17.33 ? ? ? ? ? ? ? 9 1 0.999 ? ? ? ? ? ? ? ? ? ?
#
_refine.aniso_B[1][1] 0.8400
_refine.aniso_B[1][2] -0.0000
_refine.aniso_B[1][3] -0.0000
_refine.aniso_B[2][2] 0.8400
_refine.aniso_B[2][3] -0.0000
_refine.aniso_B[3][3] -1.6900
_refine.B_iso_max 99.720
_refine.B_iso_mean 36.3860
_refine.B_iso_min 8.460
_refine.correlation_coeff_Fo_to_Fc 0.9690
_refine.correlation_coeff_Fo_to_Fc_free 0.9360
_refine.details 'U VALUES : REFINED INDIVIDUALLY'
_refine.diff_density_max ?
_refine.diff_density_max_esd ?
_refine.diff_density_min ?
_refine.diff_density_min_esd ?
_refine.diff_density_rms ?
_refine.diff_density_rms_esd ?
_refine.entry_id 8AAD
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.ls_abs_structure_details ?
_refine.ls_abs_structure_Flack ?
_refine.ls_abs_structure_Flack_esd ?
_refine.ls_abs_structure_Rogers ?
_refine.ls_abs_structure_Rogers_esd ?
_refine.ls_d_res_high 2.0400
_refine.ls_d_res_low 29.4700
_refine.ls_extinction_coef ?
_refine.ls_extinction_coef_esd ?
_refine.ls_extinction_expression ?
_refine.ls_extinction_method ?
_refine.ls_goodness_of_fit_all ?
_refine.ls_goodness_of_fit_all_esd ?
_refine.ls_goodness_of_fit_obs ?
_refine.ls_goodness_of_fit_obs_esd ?
_refine.ls_hydrogen_treatment ?
_refine.ls_matrix_type ?
_refine.ls_number_constraints ?
_refine.ls_number_parameters ?
_refine.ls_number_reflns_all ?
_refine.ls_number_reflns_obs 1909
_refine.ls_number_reflns_R_free 225
_refine.ls_number_reflns_R_work ?
_refine.ls_number_restraints ?
_refine.ls_percent_reflns_obs 99.8600
_refine.ls_percent_reflns_R_free 10.5000
_refine.ls_R_factor_all ?
_refine.ls_R_factor_obs 0.2636
_refine.ls_R_factor_R_free 0.3056
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_R_factor_R_work 0.2586
_refine.ls_R_Fsqd_factor_obs ?
_refine.ls_R_I_factor_obs ?
_refine.ls_redundancy_reflns_all ?
_refine.ls_redundancy_reflns_obs ?
_refine.ls_restrained_S_all ?
_refine.ls_restrained_S_obs ?
_refine.ls_shift_over_esd_max ?
_refine.ls_shift_over_esd_mean ?
_refine.ls_structure_factor_coef ?
_refine.ls_weighting_details ?
_refine.ls_weighting_scheme ?
_refine.ls_wR_factor_all ?
_refine.ls_wR_factor_obs ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.occupancy_max ?
_refine.occupancy_min ?
_refine.solvent_model_details MASK
_refine.solvent_model_param_bsol ?
_refine.solvent_model_param_ksol ?
_refine.pdbx_R_complete ?
_refine.ls_R_factor_gt ?
_refine.ls_goodness_of_fit_gt ?
_refine.ls_goodness_of_fit_ref ?
_refine.ls_shift_over_su_max ?
_refine.ls_shift_over_su_max_lt ?
_refine.ls_shift_over_su_mean ?
_refine.ls_shift_over_su_mean_lt ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 0.000
_refine.pdbx_ls_sigma_Fsqd ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_starting_model 5CDB
_refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD'
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_overall_ESU_R 0.3480
_refine.pdbx_overall_ESU_R_Free 0.2550
_refine.pdbx_solvent_vdw_probe_radii 1.2000
_refine.pdbx_solvent_ion_probe_radii 0.8000
_refine.pdbx_solvent_shrinkage_radii 0.8000
_refine.pdbx_real_space_R ?
_refine.pdbx_density_correlation ?
_refine.pdbx_pd_number_of_powder_patterns ?
_refine.pdbx_pd_number_of_points ?
_refine.pdbx_pd_meas_number_of_points ?
_refine.pdbx_pd_proc_ls_prof_R_factor ?
_refine.pdbx_pd_proc_ls_prof_wR_factor ?
_refine.pdbx_pd_Marquardt_correlation_coeff ?
_refine.pdbx_pd_Fsqrd_R_factor ?
_refine.pdbx_pd_ls_matrix_band_width ?
_refine.pdbx_overall_phase_error ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_diffrn_id 1
_refine.overall_SU_B 6.3320
_refine.overall_SU_ML 0.1720
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_average_fsc_overall ?
_refine.pdbx_average_fsc_work ?
_refine.pdbx_average_fsc_free ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id final
_refine_hist.details ?
_refine_hist.d_res_high 2.0400
_refine_hist.d_res_low 29.4700
_refine_hist.number_atoms_solvent 5
_refine_hist.number_atoms_total 273
_refine_hist.number_reflns_all ?
_refine_hist.number_reflns_obs ?
_refine_hist.number_reflns_R_free ?
_refine_hist.number_reflns_R_work ?
_refine_hist.R_factor_all ?
_refine_hist.R_factor_obs ?
_refine_hist.R_factor_R_free ?
_refine_hist.R_factor_R_work ?
_refine_hist.pdbx_number_residues_total 12
_refine_hist.pdbx_B_iso_mean_ligand 39.86
_refine_hist.pdbx_B_iso_mean_solvent 45.45
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 233
_refine_hist.pdbx_number_atoms_ligand 35
_refine_hist.pdbx_number_atoms_lipid ?
_refine_hist.pdbx_number_atoms_carb ?
_refine_hist.pdbx_pseudo_atom_details ?
#
loop_
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.criterion
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.number
_refine_ls_restr.rejects
_refine_ls_restr.type
_refine_ls_restr.weight
_refine_ls_restr.pdbx_restraint_function
'X-RAY DIFFRACTION' ? 0.007 0.011 325 ? r_bond_refined_d ? ?
'X-RAY DIFFRACTION' ? 1.762 1.180 502 ? r_angle_refined_deg ? ?
'X-RAY DIFFRACTION' ? 0.128 0.200 36 ? r_chiral_restr ? ?
'X-RAY DIFFRACTION' ? 0.016 0.020 286 ? r_gen_planes_refined ? ?
#
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_ls_shell.d_res_high 2.0450
_refine_ls_shell.d_res_low 2.0980
_refine_ls_shell.number_reflns_all 154
_refine_ls_shell.number_reflns_obs ?
_refine_ls_shell.number_reflns_R_free 16
_refine_ls_shell.number_reflns_R_work 138
_refine_ls_shell.percent_reflns_obs 100.0000
_refine_ls_shell.percent_reflns_R_free ?
_refine_ls_shell.R_factor_all ?
_refine_ls_shell.R_factor_obs ?
_refine_ls_shell.R_factor_R_free 0.5110
_refine_ls_shell.R_factor_R_free_error 0.0000
_refine_ls_shell.R_factor_R_work 0.4690
_refine_ls_shell.redundancy_reflns_all ?
_refine_ls_shell.redundancy_reflns_obs ?
_refine_ls_shell.wR_factor_all ?
_refine_ls_shell.wR_factor_obs ?
_refine_ls_shell.wR_factor_R_free ?
_refine_ls_shell.wR_factor_R_work ?
_refine_ls_shell.pdbx_R_complete ?
_refine_ls_shell.pdbx_total_number_of_bins_used 20
_refine_ls_shell.pdbx_phase_error ?
_refine_ls_shell.pdbx_fsc_work ?
_refine_ls_shell.pdbx_fsc_free ?
#
_struct.entry_id 8AAD
_struct.title
'Two carbons pendant pyridine derivative of the natural alkaloid Berberine as Human Telomeric G-quadruplex Binder'
_struct.pdbx_model_details ?
_struct.pdbx_formula_weight ?
_struct.pdbx_formula_weight_method ?
_struct.pdbx_model_type_details ?
_struct.pdbx_CASP_flag N
#
_struct_keywords.entry_id 8AAD
_struct_keywords.text 'DRUG-DNA COMPLEX, telomeric G-quadruplex, DNA'
_struct_keywords.pdbx_keywords DNA
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 2 ?
D N N 3 ?
E N N 4 ?
#
_struct_ref.id 1
_struct_ref.db_name PDB
_struct_ref.db_code 8AAD
_struct_ref.pdbx_db_accession 8AAD
_struct_ref.pdbx_db_isoform ?
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_align_begin 1
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 8AAD
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 12
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession 8AAD
_struct_ref_seq.db_align_beg 1
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 12
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 12
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
loop_
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
_pdbx_struct_assembly_gen.asym_id_list
1 1 A,B,C,D,E
1 2 A,B,C,D,E
#
_pdbx_struct_assembly_auth_evidence.id 1
_pdbx_struct_assembly_auth_evidence.assembly_id 1
_pdbx_struct_assembly_auth_evidence.experimental_support none
_pdbx_struct_assembly_auth_evidence.details ?
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 2_545 -x,-y-1,z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000
0.0000000000 -41.6800000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
metalc1 metalc ? ? A DG 3 O6 ? ? ? 1_555 C K . K ? ? A DG 3 A K 102 1_555 ? ? ? ? ? ? ? 2.638 ? ?
metalc2 metalc ? ? A DG 3 O6 ? ? ? 1_555 C K . K ? ? A DG 3 A K 102 2_545 ? ? ? ? ? ? ? 2.738 ? ?
metalc3 metalc ? ? A DG 4 O6 ? ? ? 1_555 B K . K ? ? A DG 4 A K 101 1_555 ? ? ? ? ? ? ? 2.915 ? ?
metalc4 metalc ? ? A DG 4 O6 ? ? ? 1_555 B K . K ? ? A DG 4 A K 101 2_545 ? ? ? ? ? ? ? 2.985 ? ?
metalc5 metalc ? ? A DG 4 O6 ? ? ? 1_555 C K . K ? ? A DG 4 A K 102 1_555 ? ? ? ? ? ? ? 2.950 ? ?
metalc6 metalc ? ? A DG 4 O6 ? ? ? 1_555 C K . K ? ? A DG 4 A K 102 2_545 ? ? ? ? ? ? ? 2.757 ? ?
metalc7 metalc ? ? A DG 5 O6 ? ? ? 1_555 B K . K ? ? A DG 5 A K 101 1_555 ? ? ? ? ? ? ? 2.782 ? ?
metalc8 metalc ? ? A DG 5 O6 ? ? ? 1_555 B K . K ? ? A DG 5 A K 101 2_545 ? ? ? ? ? ? ? 2.527 ? ?
metalc9 metalc ? ? A DG 9 O6 ? ? ? 1_555 C K . K ? ? A DG 9 A K 102 1_555 ? ? ? ? ? ? ? 3.001 ? ?
metalc10 metalc ? ? A DG 9 O6 ? ? ? 1_555 C K . K ? ? A DG 9 A K 102 2_545 ? ? ? ? ? ? ? 2.529 ? ?
metalc11 metalc ? ? A DG 10 O6 ? ? ? 1_555 B K . K ? ? A DG 10 A K 101 1_555 ? ? ? ? ? ? ? 3.200 ? ?
metalc12 metalc ? ? A DG 10 O6 ? ? ? 1_555 B K . K ? ? A DG 10 A K 101 2_545 ? ? ? ? ? ? ? 2.559 ? ?
metalc13 metalc ? ? A DG 10 O6 ? ? ? 1_555 C K . K ? ? A DG 10 A K 102 1_555 ? ? ? ? ? ? ? 3.054 ? ?
metalc14 metalc ? ? A DG 10 O6 ? ? ? 1_555 C K . K ? ? A DG 10 A K 102 2_545 ? ? ? ? ? ? ? 2.646 ? ?
metalc15 metalc ? ? A DG 11 O6 ? ? ? 1_555 B K . K ? ? A DG 11 A K 101 1_555 ? ? ? ? ? ? ? 3.022 ? ?
metalc16 metalc ? ? A DG 11 O6 ? ? ? 1_555 B K . K ? ? A DG 11 A K 101 2_545 ? ? ? ? ? ? ? 2.336 ? ?
hydrog1 hydrog ? ? A DT 1 N3 ? ? ? 1_555 A DA 2 N1 ? ? A DT 1 A DA 2 2_545 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ?
hydrog2 hydrog ? ? A DT 1 O2 ? ? ? 1_555 A DA 2 N6 ? ? A DT 1 A DA 2 2_545 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ?
hydrog3 hydrog ? ? A DA 2 N1 ? ? ? 1_555 A DT 1 N3 ? ? A DA 2 A DT 1 2_545 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ?
hydrog4 hydrog ? ? A DA 2 N6 ? ? ? 1_555 A DT 1 O2 ? ? A DA 2 A DT 1 2_545 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ?
hydrog5 hydrog ? ? A DG 3 N1 ? ? ? 1_555 A DG 9 O6 ? ? A DG 3 A DG 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ?
hydrog6 hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DG 9 N7 ? ? A DG 3 A DG 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ?
hydrog7 hydrog ? ? A DG 3 N7 ? ? ? 1_555 A DG 9 N2 ? ? A DG 3 A DG 9 2_545 ? ? ? ? ? ? TYPE_6_PAIR ? ? ?
hydrog8 hydrog ? ? A DG 3 O6 ? ? ? 1_555 A DG 9 N1 ? ? A DG 3 A DG 9 2_545 ? ? ? ? ? ? TYPE_6_PAIR ? ? ?
hydrog9 hydrog ? ? A DG 4 N1 ? ? ? 1_555 A DG 10 O6 ? ? A DG 4 A DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ?
hydrog10 hydrog ? ? A DG 4 N2 ? ? ? 1_555 A DG 10 N7 ? ? A DG 4 A DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ?
hydrog11 hydrog ? ? A DG 4 N7 ? ? ? 1_555 A DG 10 N2 ? ? A DG 4 A DG 10 2_545 ? ? ? ? ? ? TYPE_6_PAIR ? ? ?
hydrog12 hydrog ? ? A DG 4 O6 ? ? ? 1_555 A DG 10 N1 ? ? A DG 4 A DG 10 2_545 ? ? ? ? ? ? TYPE_6_PAIR ? ? ?
hydrog13 hydrog ? ? A DG 5 N1 ? ? ? 1_555 A DG 11 O6 ? ? A DG 5 A DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ?
hydrog14 hydrog ? ? A DG 5 N2 ? ? ? 1_555 A DG 11 N7 ? ? A DG 5 A DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ?
hydrog15 hydrog ? ? A DG 5 N7 ? ? ? 1_555 A DG 11 N2 ? ? A DG 5 A DG 11 2_545 ? ? ? ? ? ? TYPE_6_PAIR ? ? ?
hydrog16 hydrog ? ? A DG 5 O6 ? ? ? 1_555 A DG 11 N1 ? ? A DG 5 A DG 11 2_545 ? ? ? ? ? ? TYPE_6_PAIR ? ? ?
hydrog17 hydrog ? ? A DG 9 N1 ? ? ? 1_555 A DG 3 O6 ? ? A DG 9 A DG 3 2_545 ? ? ? ? ? ? TYPE_6_PAIR ? ? ?
hydrog18 hydrog ? ? A DG 9 N2 ? ? ? 1_555 A DG 3 N7 ? ? A DG 9 A DG 3 2_545 ? ? ? ? ? ? TYPE_6_PAIR ? ? ?
hydrog19 hydrog ? ? A DG 10 N1 ? ? ? 1_555 A DG 4 O6 ? ? A DG 10 A DG 4 2_545 ? ? ? ? ? ? TYPE_6_PAIR ? ? ?
hydrog20 hydrog ? ? A DG 10 N2 ? ? ? 1_555 A DG 4 N7 ? ? A DG 10 A DG 4 2_545 ? ? ? ? ? ? TYPE_6_PAIR ? ? ?
hydrog21 hydrog ? ? A DG 11 N1 ? ? ? 1_555 A DG 5 O6 ? ? A DG 11 A DG 5 2_545 ? ? ? ? ? ? TYPE_6_PAIR ? ? ?
hydrog22 hydrog ? ? A DG 11 N2 ? ? ? 1_555 A DG 5 N7 ? ? A DG 11 A DG 5 2_545 ? ? ? ? ? ? TYPE_6_PAIR ? ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
metalc ? ?
hydrog ? ?
#
loop_
_pdbx_struct_conn_angle.id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_alt_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_auth_atom_id
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_alt_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr2_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_atom_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code
_pdbx_struct_conn_angle.ptnr2_symmetry
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_alt_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_atom_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_pdbx_struct_conn_angle.value_esd
1 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 3 ? A DG 3 ? 1_555 0.0 ?
2 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 4 ? A DG 4 ? 1_555 75.6 ?
3 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 4 ? A DG 4 ? 1_555 75.6 ?
4 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 4 ? A DG 4 ? 1_555 75.6 ?
5 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 4 ? A DG 4 ? 1_555 75.6 ?
6 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 4 ? A DG 4 ? 1_555 0.0 ?
7 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 72.0 ?
8 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 72.0 ?
9 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 81.7 ?
10 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 81.7 ?
11 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 72.0 ?
12 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 72.0 ?
13 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 81.7 ?
14 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 81.7 ?
15 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 0.0 ?
16 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 127.4 ?
17 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 127.4 ?
18 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 62.5 ?
19 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 62.5 ?
20 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 71.8 ?
21 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 71.8 ?
22 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 127.4 ?
23 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 127.4 ?
24 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 62.5 ?
25 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 62.5 ?
26 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 71.8 ?
27 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 71.8 ?
28 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 0.0 ?
29 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 4 ? A DG 4 ? 1_555 0.0 ?
30 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 5 ? A DG 5 ? 1_555 70.6 ?
31 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 5 ? A DG 5 ? 1_555 70.6 ?
32 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 5 ? A DG 5 ? 1_555 70.6 ?
33 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 5 ? A DG 5 ? 1_555 70.6 ?
34 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 5 ? A DG 5 ? 1_555 0.0 ?
35 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 61.1 ?
36 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 61.1 ?
37 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 80.1 ?
38 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 80.1 ?
39 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 61.1 ?
40 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 61.1 ?
41 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 80.1 ?
42 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 80.1 ?
43 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 0.0 ?
44 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 114.9 ?
45 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 114.9 ?
46 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 67.2 ?
47 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 67.2 ?
48 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 64.6 ?
49 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 64.6 ?
50 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 114.9 ?
51 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 114.9 ?
52 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 67.2 ?
53 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 67.2 ?
54 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 64.6 ?
55 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 64.6 ?
56 O6 ? A DG 11 ? A DG 11 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 0.0 ?
#
loop_
_pdbx_validate_symm_contact.id
_pdbx_validate_symm_contact.PDB_model_num
_pdbx_validate_symm_contact.auth_atom_id_1
_pdbx_validate_symm_contact.auth_asym_id_1
_pdbx_validate_symm_contact.auth_comp_id_1
_pdbx_validate_symm_contact.auth_seq_id_1
_pdbx_validate_symm_contact.PDB_ins_code_1
_pdbx_validate_symm_contact.label_alt_id_1
_pdbx_validate_symm_contact.site_symmetry_1
_pdbx_validate_symm_contact.auth_atom_id_2
_pdbx_validate_symm_contact.auth_asym_id_2
_pdbx_validate_symm_contact.auth_comp_id_2
_pdbx_validate_symm_contact.auth_seq_id_2
_pdbx_validate_symm_contact.PDB_ins_code_2
_pdbx_validate_symm_contact.label_alt_id_2
_pdbx_validate_symm_contact.site_symmetry_2
_pdbx_validate_symm_contact.dist
1 1 O2 A DT 7 ? ? 1_555 C2 A DA 8 ? B 7_645 1.48
2 1 N3 A DT 7 ? ? 1_555 N3 A DT 7 ? ? 2_645 2.16
#
_pdbx_entry_details.entry_id 8AAD
_pdbx_entry_details.has_ligand_of_interest Y
_pdbx_entry_details.compound_details ?
_pdbx_entry_details.source_details ?
_pdbx_entry_details.nonpolymer_details ?
_pdbx_entry_details.sequence_details ?
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
DA OP3 O N N 1
DA P P N N 2
DA OP1 O N N 3
DA OP2 O N N 4
DA "O5'" O N N 5
DA "C5'" C N N 6
DA "C4'" C N R 7
DA "O4'" O N N 8
DA "C3'" C N S 9
DA "O3'" O N N 10
DA "C2'" C N N 11
DA "C1'" C N R 12
DA N9 N Y N 13
DA C8 C Y N 14
DA N7 N Y N 15
DA C5 C Y N 16
DA C6 C Y N 17
DA N6 N N N 18
DA N1 N Y N 19
DA C2 C Y N 20
DA N3 N Y N 21
DA C4 C Y N 22
DA HOP3 H N N 23
DA HOP2 H N N 24
DA "H5'" H N N 25
DA "H5''" H N N 26
DA "H4'" H N N 27
DA "H3'" H N N 28
DA "HO3'" H N N 29
DA "H2'" H N N 30
DA "H2''" H N N 31
DA "H1'" H N N 32
DA H8 H N N 33
DA H61 H N N 34
DA H62 H N N 35
DA H2 H N N 36
DG OP3 O N N 37
DG P P N N 38
DG OP1 O N N 39
DG OP2 O N N 40
DG "O5'" O N N 41
DG "C5'" C N N 42
DG "C4'" C N R 43
DG "O4'" O N N 44
DG "C3'" C N S 45
DG "O3'" O N N 46
DG "C2'" C N N 47
DG "C1'" C N R 48
DG N9 N Y N 49
DG C8 C Y N 50
DG N7 N Y N 51
DG C5 C Y N 52
DG C6 C N N 53
DG O6 O N N 54
DG N1 N N N 55
DG C2 C N N 56
DG N2 N N N 57
DG N3 N N N 58
DG C4 C Y N 59
DG HOP3 H N N 60
DG HOP2 H N N 61
DG "H5'" H N N 62
DG "H5''" H N N 63
DG "H4'" H N N 64
DG "H3'" H N N 65
DG "HO3'" H N N 66
DG "H2'" H N N 67
DG "H2''" H N N 68
DG "H1'" H N N 69
DG H8 H N N 70
DG H1 H N N 71
DG H21 H N N 72
DG H22 H N N 73
DT OP3 O N N 74
DT P P N N 75
DT OP1 O N N 76
DT OP2 O N N 77
DT "O5'" O N N 78
DT "C5'" C N N 79
DT "C4'" C N R 80
DT "O4'" O N N 81
DT "C3'" C N S 82
DT "O3'" O N N 83
DT "C2'" C N N 84
DT "C1'" C N R 85
DT N1 N N N 86
DT C2 C N N 87
DT O2 O N N 88
DT N3 N N N 89
DT C4 C N N 90
DT O4 O N N 91
DT C5 C N N 92
DT C7 C N N 93
DT C6 C N N 94
DT HOP3 H N N 95
DT HOP2 H N N 96
DT "H5'" H N N 97
DT "H5''" H N N 98
DT "H4'" H N N 99
DT "H3'" H N N 100
DT "HO3'" H N N 101
DT "H2'" H N N 102
DT "H2''" H N N 103
DT "H1'" H N N 104
DT H3 H N N 105
DT H71 H N N 106
DT H72 H N N 107
DT H73 H N N 108
DT H6 H N N 109
HOH O O N N 110
HOH H1 H N N 111
HOH H2 H N N 112
K K K N N 113
LKO O2 O N N 114
LKO C2 C Y N 115
LKO C3 C Y N 116
LKO O3 O N N 117
LKO C4 C Y N 118
LKO O4 O N N 119
LKO C5 C Y N 120
LKO C6 C Y N 121
LKO C1 C N N 122
LKO O1 O N N 123
LKO C19 C N N 124
LKO C18 C Y N 125
LKO C13 C Y N 126
LKO C12 C Y N 127
LKO C15 C Y N 128
LKO C16 C Y N 129
LKO C17 C Y N 130
LKO C20 C N N 131
LKO C11 C Y N 132
LKO C10 C Y N 133
LKO N1 N Y N 134
LKO C14 C Y N 135
LKO C7 C Y N 136
LKO C8 C N N 137
LKO C9 C N N 138
LKO C21 C N N 139
LKO C22 C N N 140
LKO C25 C Y N 141
LKO C26 C Y N 142
LKO C27 C Y N 143
LKO N2 N Y N 144
LKO C29 C Y N 145
LKO C30 C Y N 146
LKO H1 H N N 147
LKO H2 H N N 148
LKO H3 H N N 149
LKO H4 H N N 150
LKO H5 H N N 151
LKO H6 H N N 152
LKO H7 H N N 153
LKO H8 H N N 154
LKO H9 H N N 155
LKO H10 H N N 156
LKO H11 H N N 157
LKO H12 H N N 158
LKO H13 H N N 159
LKO H14 H N N 160
LKO H15 H N N 161
LKO H16 H N N 162
LKO H17 H N N 163
LKO H18 H N N 164
LKO H19 H N N 165
LKO H20 H N N 166
LKO H21 H N N 167
LKO H22 H N N 168
LKO H23 H N N 169
LKO H24 H N N 170
LKO H25 H N N 171
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DA OP3 P sing N N 1
DA OP3 HOP3 sing N N 2
DA P OP1 doub N N 3
DA P OP2 sing N N 4
DA P "O5'" sing N N 5
DA OP2 HOP2 sing N N 6
DA "O5'" "C5'" sing N N 7
DA "C5'" "C4'" sing N N 8
DA "C5'" "H5'" sing N N 9
DA "C5'" "H5''" sing N N 10
DA "C4'" "O4'" sing N N 11
DA "C4'" "C3'" sing N N 12
DA "C4'" "H4'" sing N N 13
DA "O4'" "C1'" sing N N 14
DA "C3'" "O3'" sing N N 15
DA "C3'" "C2'" sing N N 16
DA "C3'" "H3'" sing N N 17
DA "O3'" "HO3'" sing N N 18
DA "C2'" "C1'" sing N N 19
DA "C2'" "H2'" sing N N 20
DA "C2'" "H2''" sing N N 21
DA "C1'" N9 sing N N 22
DA "C1'" "H1'" sing N N 23
DA N9 C8 sing Y N 24
DA N9 C4 sing Y N 25
DA C8 N7 doub Y N 26
DA C8 H8 sing N N 27
DA N7 C5 sing Y N 28
DA C5 C6 sing Y N 29
DA C5 C4 doub Y N 30
DA C6 N6 sing N N 31
DA C6 N1 doub Y N 32
DA N6 H61 sing N N 33
DA N6 H62 sing N N 34
DA N1 C2 sing Y N 35
DA C2 N3 doub Y N 36
DA C2 H2 sing N N 37
DA N3 C4 sing Y N 38
DG OP3 P sing N N 39
DG OP3 HOP3 sing N N 40
DG P OP1 doub N N 41
DG P OP2 sing N N 42
DG P "O5'" sing N N 43
DG OP2 HOP2 sing N N 44
DG "O5'" "C5'" sing N N 45
DG "C5'" "C4'" sing N N 46
DG "C5'" "H5'" sing N N 47
DG "C5'" "H5''" sing N N 48
DG "C4'" "O4'" sing N N 49
DG "C4'" "C3'" sing N N 50
DG "C4'" "H4'" sing N N 51
DG "O4'" "C1'" sing N N 52
DG "C3'" "O3'" sing N N 53
DG "C3'" "C2'" sing N N 54
DG "C3'" "H3'" sing N N 55
DG "O3'" "HO3'" sing N N 56
DG "C2'" "C1'" sing N N 57
DG "C2'" "H2'" sing N N 58
DG "C2'" "H2''" sing N N 59
DG "C1'" N9 sing N N 60
DG "C1'" "H1'" sing N N 61
DG N9 C8 sing Y N 62
DG N9 C4 sing Y N 63
DG C8 N7 doub Y N 64
DG C8 H8 sing N N 65
DG N7 C5 sing Y N 66
DG C5 C6 sing N N 67
DG C5 C4 doub Y N 68
DG C6 O6 doub N N 69
DG C6 N1 sing N N 70
DG N1 C2 sing N N 71
DG N1 H1 sing N N 72
DG C2 N2 sing N N 73
DG C2 N3 doub N N 74
DG N2 H21 sing N N 75
DG N2 H22 sing N N 76
DG N3 C4 sing N N 77
DT OP3 P sing N N 78
DT OP3 HOP3 sing N N 79
DT P OP1 doub N N 80
DT P OP2 sing N N 81
DT P "O5'" sing N N 82
DT OP2 HOP2 sing N N 83
DT "O5'" "C5'" sing N N 84
DT "C5'" "C4'" sing N N 85
DT "C5'" "H5'" sing N N 86
DT "C5'" "H5''" sing N N 87
DT "C4'" "O4'" sing N N 88
DT "C4'" "C3'" sing N N 89
DT "C4'" "H4'" sing N N 90
DT "O4'" "C1'" sing N N 91
DT "C3'" "O3'" sing N N 92
DT "C3'" "C2'" sing N N 93
DT "C3'" "H3'" sing N N 94
DT "O3'" "HO3'" sing N N 95
DT "C2'" "C1'" sing N N 96
DT "C2'" "H2'" sing N N 97
DT "C2'" "H2''" sing N N 98
DT "C1'" N1 sing N N 99
DT "C1'" "H1'" sing N N 100
DT N1 C2 sing N N 101
DT N1 C6 sing N N 102
DT C2 O2 doub N N 103
DT C2 N3 sing N N 104
DT N3 C4 sing N N 105
DT N3 H3 sing N N 106
DT C4 O4 doub N N 107
DT C4 C5 sing N N 108
DT C5 C7 sing N N 109
DT C5 C6 doub N N 110
DT C7 H71 sing N N 111
DT C7 H72 sing N N 112
DT C7 H73 sing N N 113
DT C6 H6 sing N N 114
HOH O H1 sing N N 115
HOH O H2 sing N N 116
LKO O2 C1 sing N N 117
LKO O2 C2 sing N N 118
LKO N2 C29 doub Y N 119
LKO N2 C27 sing Y N 120
LKO C1 O1 sing N N 121
LKO C21 C11 sing N N 122
LKO C21 C22 sing N N 123
LKO C29 C30 sing Y N 124
LKO C20 O4 sing N N 125
LKO C16 C15 doub Y N 126
LKO C16 C17 sing Y N 127
LKO C15 C12 sing Y N 128
LKO C2 C3 doub Y N 129
LKO C2 C4 sing Y N 130
LKO C19 O3 sing N N 131
LKO C27 C26 doub Y N 132
LKO C3 O1 sing N N 133
LKO C3 C7 sing Y N 134
LKO C4 C5 doub Y N 135
LKO C30 C25 doub Y N 136
LKO C17 O4 sing N N 137
LKO C17 C18 doub Y N 138
LKO C11 C12 doub Y N 139
LKO C11 C10 sing Y N 140
LKO C12 C13 sing Y N 141
LKO C7 C6 doub Y N 142
LKO C9 N1 sing N N 143
LKO C9 C8 sing N N 144
LKO C26 C25 sing Y N 145
LKO C25 C22 sing N N 146
LKO C6 C5 sing Y N 147
LKO C6 C10 sing N N 148
LKO C5 C8 sing N N 149
LKO C10 N1 doub Y N 150
LKO C18 C13 sing Y N 151
LKO C18 O3 sing N N 152
LKO C13 C14 doub Y N 153
LKO N1 C14 sing Y N 154
LKO C4 H1 sing N N 155
LKO C1 H2 sing N N 156
LKO C19 H3 sing N N 157
LKO C19 H4 sing N N 158
LKO C19 H5 sing N N 159
LKO C15 H6 sing N N 160
LKO C16 H7 sing N N 161
LKO C20 H8 sing N N 162
LKO C20 H9 sing N N 163
LKO C20 H10 sing N N 164
LKO C14 H11 sing N N 165
LKO C7 H12 sing N N 166
LKO C8 H13 sing N N 167
LKO C8 H14 sing N N 168
LKO C9 H15 sing N N 169
LKO C9 H16 sing N N 170
LKO C21 H17 sing N N 171
LKO C21 H18 sing N N 172
LKO C22 H19 sing N N 173
LKO C22 H20 sing N N 174
LKO C26 H21 sing N N 175
LKO C27 H22 sing N N 176
LKO C29 H23 sing N N 177
LKO C30 H24 sing N N 178
LKO C1 H25 sing N N 179
#
loop_
_ndb_struct_conf_na.entry_id
_ndb_struct_conf_na.feature
8AAD 'double helix'
8AAD 'quadruple helix'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A DG 3 1_555 A DG 9 1_555 1.815 3.221 -0.085 4.564 -8.022 -89.860 1 A_DG3:DG9_A A 3 ? A 9 ? 6 3
1 A DG 4 1_555 A DG 10 1_555 1.486 3.497 -0.077 5.186 -5.017 -90.208 2 A_DG4:DG10_A A 4 ? A 10 ? 6 3
1 A DG 5 1_555 A DG 11 1_555 1.552 3.528 -0.431 10.572 -8.880 -91.568 3 A_DG5:DG11_A A 5 ? A 11 ? 6 3
1 A DT 1 1_555 A DA 2 2_545 -0.292 -1.000 -0.012 -11.038 1.601 -173.278 4 A_DT1:DA2_A A 1 ? A 2 ? 21 2
1 A DG 9 1_555 A DG 3 2_545 1.663 3.178 -0.144 0.356 -2.782 -89.931 5 A_DG9:DG3_A A 9 ? A 3 ? 6 3
1 A DG 3 1_555 A DG 9 2_545 -1.663 -3.178 0.144 -0.356 2.782 89.931 6 A_DG3:DG9_A A 3 ? A 9 ? 6 3
1 A DT 1 2_545 A DA 2 1_555 -0.292 -1.000 -0.012 -11.038 1.601 -173.278 7 A_DT1:DA2_A A 1 ? A 2 ? 21 2
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A DG 3 1_555 A DG 9 1_555 A DG 4 1_555 A DG 10 1_555 -0.623 -0.794 3.287 -0.091 3.647 28.925 -2.366 1.218 3.167 7.264 0.180
29.149 1 AA_DG3DG4:DG10DG9_AA A 3 ? A 9 ? A 4 ? A 10 ?
1 A DG 4 1_555 A DG 10 1_555 A DG 5 1_555 A DG 11 1_555 -0.578 -0.507 3.195 2.791 1.494 26.204 -1.494 1.984 3.084 3.280
-6.128 26.391 2 AA_DG4DG5:DG11DG10_AA A 4 ? A 10 ? A 5 ? A 11 ?
1 A DT 1 1_555 A DA 2 2_545 A DG 9 1_555 A DG 3 2_545 0.293 2.477 3.099 1.795 2.698 75.361 1.946 -0.188 3.179 2.206
-1.468 75.420 3 AA_DT1DG9:DG3DA2_AA A 1 ? A 2 ? A 9 ? A 3 ?
1 A DG 9 1_555 A DG 3 2_545 A DG 3 1_555 A DG 9 2_545 -0.040 0.248 0.000 8.565 -3.446 -180.000 -1.611 0.907 0.000 4.012 2.282
-180.000 4 AA_DG9DG3:DG9DG3_AA A 9 ? A 3 ? A 3 ? A 9 ?
#
loop_
_pdbx_audit_support.funding_organization
_pdbx_audit_support.country
_pdbx_audit_support.grant_number
_pdbx_audit_support.ordinal
'Other private' ? 'ISP B/2021/0168' 1
'Other private' ? 'ECR 23942_2019' 2
#
_pdbx_entity_instance_feature.ordinal 1
_pdbx_entity_instance_feature.comp_id LKO
_pdbx_entity_instance_feature.asym_id ?
_pdbx_entity_instance_feature.seq_num ?
_pdbx_entity_instance_feature.auth_comp_id LKO
_pdbx_entity_instance_feature.auth_asym_id ?
_pdbx_entity_instance_feature.auth_seq_num ?
_pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION'
_pdbx_entity_instance_feature.details ?
#
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'experimental model'
_pdbx_initial_refinement_model.source_name PDB
_pdbx_initial_refinement_model.accession_code 5CDB
_pdbx_initial_refinement_model.details ?
#
_atom_sites.entry_id 8AAD
_atom_sites.Cartn_transf_matrix[1][1] ?
_atom_sites.Cartn_transf_matrix[1][2] ?
_atom_sites.Cartn_transf_matrix[1][3] ?
_atom_sites.Cartn_transf_matrix[2][1] ?
_atom_sites.Cartn_transf_matrix[2][2] ?
_atom_sites.Cartn_transf_matrix[2][3] ?
_atom_sites.Cartn_transf_matrix[3][1] ?
_atom_sites.Cartn_transf_matrix[3][2] ?
_atom_sites.Cartn_transf_matrix[3][3] ?
_atom_sites.Cartn_transf_vector[1] ?
_atom_sites.Cartn_transf_vector[2] ?
_atom_sites.Cartn_transf_vector[3] ?
_atom_sites.fract_transf_matrix[1][1] 0.023992
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] -0.000000
_atom_sites.fract_transf_matrix[2][2] 0.023992
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] -0.000000
_atom_sites.fract_transf_matrix[3][3] 0.029146
_atom_sites.fract_transf_vector[1] 0.000000
_atom_sites.fract_transf_vector[2] 0.000000
_atom_sites.fract_transf_vector[3] 0.000000
_atom_sites.solution_primary ?
_atom_sites.solution_secondary ?
_atom_sites.solution_hydrogens ?
_atom_sites.special_details ?
#
loop_
_atom_type.symbol
C
K
N
O
P
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 C "C5'" . DT A 1 1 ? -6.472 -16.637 3.827 1.00 62.45 ? 1 DT A "C5'" 1
ATOM 2 C "C4'" . DT A 1 1 ? -5.040 -16.251 3.511 1.00 58.39 ? 1 DT A "C4'" 1
ATOM 3 O "O4'" . DT A 1 1 ? -4.181 -17.406 3.356 1.00 51.12 ? 1 DT A "O4'" 1
ATOM 4 C "C3'" . DT A 1 1 ? -4.858 -15.461 2.222 1.00 58.10 ? 1 DT A "C3'" 1
ATOM 5 O "O3'" . DT A 1 1 ? -3.773 -14.542 2.409 1.00 62.22 ? 1 DT A "O3'" 1
ATOM 6 C "C2'" . DT A 1 1 ? -4.577 -16.541 1.181 1.00 51.12 ? 1 DT A "C2'" 1
ATOM 7 C "C1'" . DT A 1 1 ? -3.945 -17.689 1.973 1.00 43.68 ? 1 DT A "C1'" 1
ATOM 8 N N1 . DT A 1 1 ? -4.460 -19.054 1.711 1.00 35.20 ? 1 DT A N1 1
ATOM 9 C C2 . DT A 1 1 ? -3.558 -20.096 1.672 1.00 34.09 ? 1 DT A C2 1
ATOM 10 O O2 . DT A 1 1 ? -2.350 -19.942 1.746 1.00 35.82 ? 1 DT A O2 1
ATOM 11 N N3 . DT A 1 1 ? -4.123 -21.331 1.501 1.00 29.17 ? 1 DT A N3 1
ATOM 12 C C4 . DT A 1 1 ? -5.466 -21.632 1.406 1.00 28.72 ? 1 DT A C4 1
ATOM 13 O O4 . DT A 1 1 ? -5.818 -22.795 1.230 1.00 34.35 ? 1 DT A O4 1
ATOM 14 C C5 . DT A 1 1 ? -6.354 -20.495 1.424 1.00 31.15 ? 1 DT A C5 1
ATOM 15 C C6 . DT A 1 1 ? -5.816 -19.280 1.597 1.00 32.91 ? 1 DT A C6 1
ATOM 16 P P . DA A 1 2 ? -4.010 -12.995 2.155 1.00 57.91 ? 2 DA A P 1
ATOM 17 O OP1 . DA A 1 2 ? -4.556 -12.403 3.404 1.00 65.25 ? 2 DA A OP1 1
ATOM 18 O OP2 . DA A 1 2 ? -4.747 -12.849 0.886 1.00 66.20 ? 2 DA A OP2 1
ATOM 19 O "O5'" . DA A 1 2 ? -2.541 -12.452 1.866 1.00 56.20 ? 2 DA A "O5'" 1
ATOM 20 C "C5'" . DA A 1 2 ? -1.869 -11.570 2.780 1.00 46.68 ? 2 DA A "C5'" 1
ATOM 21 C "C4'" . DA A 1 2 ? -0.394 -11.511 2.462 1.00 43.87 ? 2 DA A "C4'" 1
ATOM 22 O "O4'" . DA A 1 2 ? 0.220 -12.797 2.705 1.00 41.29 ? 2 DA A "O4'" 1
ATOM 23 C "C3'" . DA A 1 2 ? -0.043 -11.135 1.020 1.00 47.22 ? 2 DA A "C3'" 1
ATOM 24 O "O3'" . DA A 1 2 ? 1.088 -10.255 1.064 1.00 54.13 ? 2 DA A "O3'" 1
ATOM 25 C "C2'" . DA A 1 2 ? 0.283 -12.471 0.369 1.00 41.45 ? 2 DA A "C2'" 1
ATOM 26 C "C1'" . DA A 1 2 ? 0.822 -13.315 1.521 1.00 39.83 ? 2 DA A "C1'" 1
ATOM 27 N N9 . DA A 1 2 ? 0.486 -14.745 1.433 1.00 33.62 ? 2 DA A N9 1
ATOM 28 C C8 . DA A 1 2 ? -0.771 -15.291 1.331 1.00 27.58 ? 2 DA A C8 1
ATOM 29 N N7 . DA A 1 2 ? -0.774 -16.600 1.268 1.00 32.83 ? 2 DA A N7 1
ATOM 30 C C5 . DA A 1 2 ? 0.569 -16.945 1.355 1.00 29.12 ? 2 DA A C5 1
ATOM 31 C C6 . DA A 1 2 ? 1.235 -18.190 1.343 1.00 27.46 ? 2 DA A C6 1
ATOM 32 N N6 . DA A 1 2 ? 0.619 -19.365 1.211 1.00 28.84 ? 2 DA A N6 1
ATOM 33 N N1 . DA A 1 2 ? 2.579 -18.183 1.435 1.00 28.70 ? 2 DA A N1 1
ATOM 34 C C2 . DA A 1 2 ? 3.207 -17.001 1.527 1.00 32.72 ? 2 DA A C2 1
ATOM 35 N N3 . DA A 1 2 ? 2.694 -15.769 1.542 1.00 29.10 ? 2 DA A N3 1
ATOM 36 C C4 . DA A 1 2 ? 1.356 -15.811 1.458 1.00 29.11 ? 2 DA A C4 1
ATOM 37 P P . DG A 1 3 ? 1.573 -9.467 -0.244 1.00 55.46 ? 3 DG A P 1
ATOM 38 O OP1 . DG A 1 3 ? 2.341 -8.279 0.202 1.00 58.24 ? 3 DG A OP1 1
ATOM 39 O OP2 . DG A 1 3 ? 0.415 -9.334 -1.162 1.00 54.59 ? 3 DG A OP2 1
ATOM 40 O "O5'" . DG A 1 3 ? 2.572 -10.495 -0.937 1.00 51.07 ? 3 DG A "O5'" 1
ATOM 41 C "C5'" . DG A 1 3 ? 3.917 -10.626 -0.472 1.00 38.69 ? 3 DG A "C5'" 1
ATOM 42 C "C4'" . DG A 1 3 ? 4.592 -11.729 -1.248 1.00 37.98 ? 3 DG A "C4'" 1
ATOM 43 O "O4'" . DG A 1 3 ? 3.947 -13.013 -1.019 1.00 29.03 ? 3 DG A "O4'" 1
ATOM 44 C "C3'" . DG A 1 3 ? 4.634 -11.539 -2.762 1.00 36.01 ? 3 DG A "C3'" 1
ATOM 45 O "O3'" . DG A 1 3 ? 5.990 -11.909 -2.996 1.00 48.29 ? 3 DG A "O3'" 1
ATOM 46 C "C2'" . DG A 1 3 ? 3.703 -12.625 -3.278 1.00 29.92 ? 3 DG A "C2'" 1
ATOM 47 C "C1'" . DG A 1 3 ? 3.906 -13.716 -2.246 1.00 29.63 ? 3 DG A "C1'" 1
ATOM 48 N N9 . DG A 1 3 ? 2.821 -14.711 -2.169 1.00 24.89 ? 3 DG A N9 1
ATOM 49 C C8 . DG A 1 3 ? 1.472 -14.453 -2.194 1.00 22.63 ? 3 DG A C8 1
ATOM 50 N N7 . DG A 1 3 ? 0.741 -15.529 -2.069 1.00 23.57 ? 3 DG A N7 1
ATOM 51 C C5 . DG A 1 3 ? 1.664 -16.560 -1.999 1.00 23.50 ? 3 DG A C5 1
ATOM 52 C C6 . DG A 1 3 ? 1.465 -17.952 -1.865 1.00 21.31 ? 3 DG A C6 1
ATOM 53 O O6 . DG A 1 3 ? 0.390 -18.580 -1.848 1.00 20.98 ? 3 DG A O6 1
ATOM 54 N N1 . DG A 1 3 ? 2.674 -18.637 -1.806 1.00 17.97 ? 3 DG A N1 1
ATOM 55 C C2 . DG A 1 3 ? 3.918 -18.045 -1.819 1.00 20.54 ? 3 DG A C2 1
ATOM 56 N N2 . DG A 1 3 ? 4.978 -18.864 -1.680 1.00 18.11 ? 3 DG A N2 1
ATOM 57 N N3 . DG A 1 3 ? 4.110 -16.746 -1.922 1.00 19.89 ? 3 DG A N3 1
ATOM 58 C C4 . DG A 1 3 ? 2.952 -16.068 -2.017 1.00 21.14 ? 3 DG A C4 1
ATOM 59 P P . DG A 1 4 ? 6.738 -11.562 -4.365 1.00 47.16 ? 4 DG A P 1
ATOM 60 O OP1 . DG A 1 4 ? 7.861 -10.649 -4.038 1.00 54.24 ? 4 DG A OP1 1
ATOM 61 O OP2 . DG A 1 4 ? 5.750 -11.204 -5.376 1.00 39.79 ? 4 DG A OP2 1
ATOM 62 O "O5'" . DG A 1 4 ? 7.349 -12.957 -4.808 1.00 47.04 ? 4 DG A "O5'" 1
ATOM 63 C "C5'" . DG A 1 4 ? 8.155 -13.731 -3.915 1.00 43.15 ? 4 DG A "C5'" 1
ATOM 64 C "C4'" . DG A 1 4 ? 8.442 -15.078 -4.539 1.00 36.95 ? 4 DG A "C4'" 1
ATOM 65 O "O4'" . DG A 1 4 ? 7.360 -15.985 -4.228 1.00 29.98 ? 4 DG A "O4'" 1
ATOM 66 C "C3'" . DG A 1 4 ? 8.612 -15.088 -6.065 1.00 34.96 ? 4 DG A "C3'" 1
ATOM 67 O "O3'" . DG A 1 4 ? 9.755 -15.887 -6.406 1.00 43.58 ? 4 DG A "O3'" 1
ATOM 68 C "C2'" . DG A 1 4 ? 7.429 -15.890 -6.584 1.00 31.56 ? 4 DG A "C2'" 1
ATOM 69 C "C1'" . DG A 1 4 ? 7.038 -16.748 -5.384 1.00 30.22 ? 4 DG A "C1'" 1
ATOM 70 N N9 . DG A 1 4 ? 5.614 -17.056 -5.316 1.00 21.46 ? 4 DG A N9 1
ATOM 71 C C8 . DG A 1 4 ? 4.562 -16.173 -5.260 1.00 20.14 ? 4 DG A C8 1
ATOM 72 N N7 . DG A 1 4 ? 3.402 -16.764 -5.168 1.00 21.95 ? 4 DG A N7 1
ATOM 73 C C5 . DG A 1 4 ? 3.713 -18.119 -5.145 1.00 20.66 ? 4 DG A C5 1
ATOM 74 C C6 . DG A 1 4 ? 2.874 -19.259 -5.040 1.00 17.67 ? 4 DG A C6 1
ATOM 75 O O6 . DG A 1 4 ? 1.641 -19.307 -4.961 1.00 15.77 ? 4 DG A O6 1
ATOM 76 N N1 . DG A 1 4 ? 3.605 -20.439 -5.087 1.00 17.10 ? 4 DG A N1 1
ATOM 77 C C2 . DG A 1 4 ? 4.973 -20.518 -5.199 1.00 19.58 ? 4 DG A C2 1
ATOM 78 N N2 . DG A 1 4 ? 5.496 -21.750 -5.250 1.00 17.53 ? 4 DG A N2 1
ATOM 79 N N3 . DG A 1 4 ? 5.766 -19.467 -5.283 1.00 19.54 ? 4 DG A N3 1
ATOM 80 C C4 . DG A 1 4 ? 5.076 -18.309 -5.245 1.00 20.25 ? 4 DG A C4 1
ATOM 81 P P . DG A 1 5 ? 10.438 -15.746 -7.841 1.00 48.02 ? 5 DG A P 1
ATOM 82 O OP1 . DG A 1 5 ? 11.885 -15.447 -7.603 1.00 54.73 ? 5 DG A OP1 1
ATOM 83 O OP2 . DG A 1 5 ? 9.599 -14.900 -8.700 1.00 38.87 ? 5 DG A OP2 1
ATOM 84 O "O5'" . DG A 1 5 ? 10.302 -17.193 -8.477 1.00 41.94 ? 5 DG A "O5'" 1
ATOM 85 C "C5'" . DG A 1 5 ? 10.406 -18.344 -7.637 1.00 40.03 ? 5 DG A "C5'" 1
ATOM 86 C "C4'" . DG A 1 5 ? 10.134 -19.580 -8.458 1.00 39.38 ? 5 DG A "C4'" 1
ATOM 87 O "O4'" . DG A 1 5 ? 8.818 -20.105 -8.157 1.00 35.36 ? 5 DG A "O4'" 1
ATOM 88 C "C3'" . DG A 1 5 ? 10.184 -19.394 -9.975 1.00 40.74 ? 5 DG A "C3'" 1
ATOM 89 O "O3'" . DG A 1 5 ? 10.731 -20.628 -10.450 1.00 43.87 ? 5 DG A "O3'" 1
ATOM 90 C "C2'" . DG A 1 5 ? 8.717 -19.308 -10.370 1.00 32.05 ? 5 DG A "C2'" 1
ATOM 91 C "C1'" . DG A 1 5 ? 8.059 -20.215 -9.350 1.00 28.56 ? 5 DG A "C1'" 1
ATOM 92 N N9 . DG A 1 5 ? 6.675 -19.870 -9.033 1.00 23.83 ? 5 DG A N9 1
ATOM 93 C C8 . DG A 1 5 ? 6.107 -18.626 -8.937 1.00 23.26 ? 5 DG A C8 1
ATOM 94 N N7 . DG A 1 5 ? 4.825 -18.665 -8.691 1.00 23.86 ? 5 DG A N7 1
ATOM 95 C C5 . DG A 1 5 ? 4.544 -20.019 -8.569 1.00 22.50 ? 5 DG A C5 1
ATOM 96 C C6 . DG A 1 5 ? 3.315 -20.685 -8.333 1.00 20.83 ? 5 DG A C6 1
ATOM 97 O O6 . DG A 1 5 ? 2.210 -20.190 -8.084 1.00 16.05 ? 5 DG A O6 1
ATOM 98 N N1 . DG A 1 5 ? 3.475 -22.069 -8.330 1.00 18.30 ? 5 DG A N1 1
ATOM 99 C C2 . DG A 1 5 ? 4.666 -22.723 -8.554 1.00 19.66 ? 5 DG A C2 1
ATOM 100 N N2 . DG A 1 5 ? 4.641 -24.049 -8.505 1.00 19.02 ? 5 DG A N2 1
ATOM 101 N N3 . DG A 1 5 ? 5.798 -22.116 -8.820 1.00 21.84 ? 5 DG A N3 1
ATOM 102 C C4 . DG A 1 5 ? 5.667 -20.774 -8.818 1.00 23.53 ? 5 DG A C4 1
ATOM 103 P P . DT A 1 6 ? 11.937 -20.674 -11.489 1.00 43.89 ? 6 DT A P 1
ATOM 104 O OP1 . DT A 1 6 ? 11.856 -19.517 -12.429 1.00 39.85 ? 6 DT A OP1 1
ATOM 105 O OP2 . DT A 1 6 ? 12.017 -22.065 -11.963 1.00 41.11 ? 6 DT A OP2 1
ATOM 106 O "O5'" . DT A 1 6 ? 13.203 -20.310 -10.593 1.00 43.30 ? 6 DT A "O5'" 1
ATOM 107 C "C5'" . DT A 1 6 ? 13.705 -21.206 -9.605 1.00 47.38 ? 6 DT A "C5'" 1
ATOM 108 C "C4'" . DT A 1 6 ? 15.109 -20.756 -9.284 1.00 52.92 ? 6 DT A "C4'" 1
ATOM 109 O "O4'" . DT A 1 6 ? 15.059 -19.500 -8.578 1.00 58.73 ? 6 DT A "O4'" 1
ATOM 110 C "C3'" . DT A 1 6 ? 15.911 -21.722 -8.421 1.00 55.09 ? 6 DT A "C3'" 1
ATOM 111 O "O3'" . DT A 1 6 ? 17.136 -21.984 -9.128 1.00 56.74 ? 6 DT A "O3'" 1
ATOM 112 C "C2'" . DT A 1 6 ? 15.986 -21.035 -7.064 1.00 60.03 ? 6 DT A "C2'" 1
ATOM 113 C "C1'" . DT A 1 6 ? 15.862 -19.559 -7.412 1.00 66.18 ? 6 DT A "C1'" 1
ATOM 114 N N1 . DT A 1 6 ? 15.254 -18.660 -6.388 1.00 78.45 ? 6 DT A N1 1
ATOM 115 C C2 . DT A 1 6 ? 15.966 -17.538 -6.008 1.00 89.63 ? 6 DT A C2 1
ATOM 116 O O2 . DT A 1 6 ? 17.070 -17.265 -6.450 1.00 88.75 ? 6 DT A O2 1
ATOM 117 N N3 . DT A 1 6 ? 15.341 -16.752 -5.070 1.00 93.05 ? 6 DT A N3 1
ATOM 118 C C4 . DT A 1 6 ? 14.095 -16.952 -4.508 1.00 97.26 ? 6 DT A C4 1
ATOM 119 O O4 . DT A 1 6 ? 13.663 -16.152 -3.680 1.00 98.72 ? 6 DT A O4 1
ATOM 120 C C5 . DT A 1 6 ? 13.394 -18.136 -4.964 1.00 99.72 ? 6 DT A C5 1
ATOM 121 C C7 . DT A 1 6 ? 12.039 -18.437 -4.406 1.00 95.53 ? 6 DT A C7 1
ATOM 122 C C6 . DT A 1 6 ? 13.998 -18.915 -5.875 1.00 90.09 ? 6 DT A C6 1
ATOM 123 P P . DT A 1 7 ? 17.370 -23.413 -9.882 1.00 57.93 ? 7 DT A P 1
ATOM 124 O OP1 . DT A 1 7 ? 18.763 -23.447 -10.411 1.00 63.22 ? 7 DT A OP1 1
ATOM 125 O OP2 . DT A 1 7 ? 16.241 -23.645 -10.805 1.00 53.72 ? 7 DT A OP2 1
ATOM 126 O "O5'" . DT A 1 7 ? 17.318 -24.463 -8.692 1.00 54.32 ? 7 DT A "O5'" 1
ATOM 127 C "C5'" . DT A 1 7 ? 18.435 -24.518 -7.796 1.00 50.34 ? 7 DT A "C5'" 1
ATOM 128 C "C4'" . DT A 1 7 ? 18.064 -25.225 -6.517 1.00 43.27 ? 7 DT A "C4'" 1
ATOM 129 O "O4'" . DT A 1 7 ? 19.227 -25.270 -5.657 1.00 41.96 ? 7 DT A "O4'" 1
ATOM 130 C "C3'" . DT A 1 7 ? 16.945 -24.598 -5.690 1.00 45.73 ? 7 DT A "C3'" 1
ATOM 131 O "O3'" . DT A 1 7 ? 16.216 -25.696 -5.103 1.00 43.74 ? 7 DT A "O3'" 1
ATOM 132 C "C2'" . DT A 1 7 ? 17.699 -23.778 -4.652 1.00 40.63 ? 7 DT A "C2'" 1
ATOM 133 C "C1'" . DT A 1 7 ? 19.044 -24.496 -4.477 1.00 42.82 ? 7 DT A "C1'" 1
ATOM 134 N N1 . DT A 1 7 ? 20.202 -23.564 -4.360 1.00 40.41 ? 7 DT A N1 1
ATOM 135 C C2 . DT A 1 7 ? 20.262 -22.693 -3.285 1.00 46.26 ? 7 DT A C2 1
ATOM 136 O O2 . DT A 1 7 ? 19.453 -22.693 -2.367 1.00 36.98 ? 7 DT A O2 1
ATOM 137 N N3 . DT A 1 7 ? 21.314 -21.810 -3.326 1.00 45.96 ? 7 DT A N3 1
ATOM 138 C C4 . DT A 1 7 ? 22.289 -21.713 -4.301 1.00 44.85 ? 7 DT A C4 1
ATOM 139 O O4 . DT A 1 7 ? 23.201 -20.897 -4.173 1.00 42.37 ? 7 DT A O4 1
ATOM 140 C C5 . DT A 1 7 ? 22.152 -22.639 -5.400 1.00 40.25 ? 7 DT A C5 1
ATOM 141 C C7 . DT A 1 7 ? 23.156 -22.603 -6.507 1.00 46.03 ? 7 DT A C7 1
ATOM 142 C C6 . DT A 1 7 ? 21.124 -23.498 -5.379 1.00 39.20 ? 7 DT A C6 1
ATOM 143 P P A DA A 1 8 ? 14.698 -25.527 -4.658 0.50 43.62 ? 8 DA A P 1
ATOM 144 P P B DA A 1 8 ? 14.724 -25.496 -4.531 0.50 46.28 ? 8 DA A P 1
ATOM 145 O OP1 A DA A 1 8 ? 14.371 -26.619 -3.725 0.50 38.28 ? 8 DA A OP1 1
ATOM 146 O OP1 B DA A 1 8 ? 14.437 -26.605 -3.603 0.50 40.56 ? 8 DA A OP1 1
ATOM 147 O OP2 A DA A 1 8 ? 13.878 -25.288 -5.873 0.50 49.79 ? 8 DA A OP2 1
ATOM 148 O OP2 B DA A 1 8 ? 13.820 -25.214 -5.677 0.50 51.93 ? 8 DA A OP2 1
ATOM 149 O "O5'" A DA A 1 8 ? 14.703 -24.206 -3.767 0.50 42.02 ? 8 DA A "O5'" 1
ATOM 150 O "O5'" B DA A 1 8 ? 14.802 -24.189 -3.619 0.50 45.20 ? 8 DA A "O5'" 1
ATOM 151 C "C5'" A DA A 1 8 ? 14.999 -24.285 -2.371 0.50 40.01 ? 8 DA A "C5'" 1
ATOM 152 C "C5'" B DA A 1 8 ? 15.221 -24.282 -2.250 0.50 47.01 ? 8 DA A "C5'" 1
ATOM 153 C "C4'" A DA A 1 8 ? 14.661 -22.979 -1.691 0.50 42.22 ? 8 DA A "C4'" 1
ATOM 154 C "C4'" B DA A 1 8 ? 14.436 -23.348 -1.356 0.50 51.03 ? 8 DA A "C4'" 1
ATOM 155 O "O4'" A DA A 1 8 ? 15.680 -21.980 -1.921 0.50 37.87 ? 8 DA A "O4'" 1
ATOM 156 O "O4'" B DA A 1 8 ? 15.327 -22.420 -0.694 0.50 49.97 ? 8 DA A "O4'" 1
ATOM 157 C "C3'" A DA A 1 8 ? 13.334 -22.321 -2.093 0.50 44.03 ? 8 DA A "C3'" 1
ATOM 158 C "C3'" B DA A 1 8 ? 13.374 -22.462 -2.000 0.50 53.09 ? 8 DA A "C3'" 1
ATOM 159 O "O3'" A DA A 1 8 ? 12.660 -22.137 -0.837 0.50 51.82 ? 8 DA A "O3'" 1
ATOM 160 O "O3'" B DA A 1 8 ? 12.661 -22.121 -0.806 0.50 57.14 ? 8 DA A "O3'" 1
ATOM 161 C "C2'" A DA A 1 8 ? 13.759 -20.985 -2.697 0.50 37.52 ? 8 DA A "C2'" 1
ATOM 162 C "C2'" B DA A 1 8 ? 14.168 -21.211 -2.339 0.50 48.59 ? 8 DA A "C2'" 1
ATOM 163 C "C1'" A DA A 1 8 ? 15.012 -20.733 -1.893 0.50 36.56 ? 8 DA A "C1'" 1
ATOM 164 C "C1'" B DA A 1 8 ? 14.945 -21.082 -1.037 0.50 46.13 ? 8 DA A "C1'" 1
ATOM 165 N N9 A DA A 1 8 ? 15.947 -19.715 -2.354 0.50 31.89 ? 8 DA A N9 1
ATOM 166 N N9 B DA A 1 8 ? 16.148 -20.243 -1.007 0.50 38.45 ? 8 DA A N9 1
ATOM 167 C C8 A DA A 1 8 ? 16.833 -19.837 -3.391 0.50 32.46 ? 8 DA A C8 1
ATOM 168 C C8 B DA A 1 8 ? 16.415 -19.031 -1.595 0.50 39.35 ? 8 DA A C8 1
ATOM 169 N N7 A DA A 1 8 ? 17.598 -18.785 -3.562 0.50 31.98 ? 8 DA A N7 1
ATOM 170 N N7 B DA A 1 8 ? 17.597 -18.543 -1.288 0.50 38.90 ? 8 DA A N7 1
ATOM 171 C C5 A DA A 1 8 ? 17.201 -17.918 -2.558 0.50 33.08 ? 8 DA A C5 1
ATOM 172 C C5 B DA A 1 8 ? 18.145 -19.505 -0.451 0.50 37.46 ? 8 DA A C5 1
ATOM 173 C C6 A DA A 1 8 ? 17.655 -16.648 -2.179 0.50 32.53 ? 8 DA A C6 1
ATOM 174 C C6 B DA A 1 8 ? 19.380 -19.590 0.221 0.50 35.17 ? 8 DA A C6 1
ATOM 175 N N6 A DA A 1 8 ? 18.621 -15.989 -2.821 0.50 30.98 ? 8 DA A N6 1
ATOM 176 N N6 B DA A 1 8 ? 20.347 -18.672 0.138 0.50 28.06 ? 8 DA A N6 1
ATOM 177 N N1 A DA A 1 8 ? 17.051 -16.054 -1.126 0.50 32.53 ? 8 DA A N1 1
ATOM 178 N N1 B DA A 1 8 ? 19.596 -20.675 0.992 0.50 36.15 ? 8 DA A N1 1
ATOM 179 C C2 A DA A 1 8 ? 16.075 -16.715 -0.490 0.50 32.13 ? 8 DA A C2 1
ATOM 180 C C2 B DA A 1 8 ? 18.638 -21.604 1.076 0.50 36.32 ? 8 DA A C2 1
ATOM 181 N N3 A DA A 1 8 ? 15.574 -17.922 -0.740 0.50 32.04 ? 8 DA A N3 1
ATOM 182 N N3 B DA A 1 8 ? 17.425 -21.615 0.536 0.50 37.23 ? 8 DA A N3 1
ATOM 183 C C4 A DA A 1 8 ? 16.198 -18.485 -1.791 0.50 34.67 ? 8 DA A C4 1
ATOM 184 C C4 B DA A 1 8 ? 17.245 -20.534 -0.237 0.50 36.07 ? 8 DA A C4 1
ATOM 185 P P . DG A 1 9 ? 11.070 -21.934 -0.754 1.00 63.67 ? 9 DG A P 1
ATOM 186 O OP1 . DG A 1 9 ? 10.678 -20.871 -1.736 1.00 54.87 ? 9 DG A OP1 1
ATOM 187 O OP2 . DG A 1 9 ? 10.702 -21.810 0.688 1.00 57.99 ? 9 DG A OP2 1
ATOM 188 O "O5'" . DG A 1 9 ? 10.500 -23.293 -1.356 1.00 53.84 ? 9 DG A "O5'" 1
ATOM 189 C "C5'" . DG A 1 9 ? 10.235 -24.422 -0.528 1.00 43.10 ? 9 DG A "C5'" 1
ATOM 190 C "C4'" . DG A 1 9 ? 9.218 -25.302 -1.215 1.00 35.90 ? 9 DG A "C4'" 1
ATOM 191 O "O4'" . DG A 1 9 ? 7.897 -24.794 -0.938 1.00 31.31 ? 9 DG A "O4'" 1
ATOM 192 C "C3'" . DG A 1 9 ? 9.337 -25.410 -2.735 1.00 35.53 ? 9 DG A "C3'" 1
ATOM 193 O "O3'" . DG A 1 9 ? 9.370 -26.823 -2.914 1.00 40.32 ? 9 DG A "O3'" 1
ATOM 194 C "C2'" . DG A 1 9 ? 8.088 -24.718 -3.261 1.00 31.99 ? 9 DG A "C2'" 1
ATOM 195 C "C1'" . DG A 1 9 ? 7.113 -24.838 -2.113 1.00 31.94 ? 9 DG A "C1'" 1
ATOM 196 N N9 . DG A 1 9 ? 6.129 -23.757 -2.030 1.00 27.13 ? 9 DG A N9 1
ATOM 197 C C8 . DG A 1 9 ? 6.391 -22.409 -1.955 1.00 23.52 ? 9 DG A C8 1
ATOM 198 N N7 . DG A 1 9 ? 5.312 -21.684 -1.830 1.00 24.05 ? 9 DG A N7 1
ATOM 199 C C5 . DG A 1 9 ? 4.276 -22.607 -1.844 1.00 23.93 ? 9 DG A C5 1
ATOM 200 C C6 . DG A 1 9 ? 2.873 -22.412 -1.783 1.00 20.27 ? 9 DG A C6 1
ATOM 201 O O6 . DG A 1 9 ? 2.245 -21.340 -1.695 1.00 18.43 ? 9 DG A O6 1
ATOM 202 N N1 . DG A 1 9 ? 2.186 -23.623 -1.828 1.00 17.45 ? 9 DG A N1 1
ATOM 203 C C2 . DG A 1 9 ? 2.778 -24.866 -1.903 1.00 20.29 ? 9 DG A C2 1
ATOM 204 N N2 . DG A 1 9 ? 1.953 -25.929 -1.912 1.00 20.89 ? 9 DG A N2 1
ATOM 205 N N3 . DG A 1 9 ? 4.081 -25.056 -1.986 1.00 21.00 ? 9 DG A N3 1
ATOM 206 C C4 . DG A 1 9 ? 4.768 -23.895 -1.916 1.00 23.01 ? 9 DG A C4 1
ATOM 207 P P . DG A 1 10 ? 9.190 -27.507 -4.340 1.00 44.99 ? 10 DG A P 1
ATOM 208 O OP1 . DG A 1 10 ? 9.573 -28.939 -4.225 1.00 51.38 ? 10 DG A OP1 1
ATOM 209 O OP2 . DG A 1 10 ? 9.772 -26.655 -5.385 1.00 40.76 ? 10 DG A OP2 1
ATOM 210 O "O5'" . DG A 1 10 ? 7.610 -27.628 -4.456 1.00 46.07 ? 10 DG A "O5'" 1
ATOM 211 C "C5'" . DG A 1 10 ? 6.920 -28.576 -3.619 1.00 42.56 ? 10 DG A "C5'" 1
ATOM 212 C "C4'" . DG A 1 10 ? 5.692 -29.093 -4.331 1.00 35.71 ? 10 DG A "C4'" 1
ATOM 213 O "O4'" . DG A 1 10 ? 4.600 -28.150 -4.189 1.00 29.53 ? 10 DG A "O4'" 1
ATOM 214 C "C3'" . DG A 1 10 ? 5.847 -29.379 -5.830 1.00 34.19 ? 10 DG A "C3'" 1
ATOM 215 O "O3'" . DG A 1 10 ? 5.195 -30.659 -5.943 1.00 41.45 ? 10 DG A "O3'" 1
ATOM 216 C "C2'" . DG A 1 10 ? 5.122 -28.223 -6.513 1.00 27.77 ? 10 DG A "C2'" 1
ATOM 217 C "C1'" . DG A 1 10 ? 4.069 -27.816 -5.473 1.00 25.78 ? 10 DG A "C1'" 1
ATOM 218 N N9 . DG A 1 10 ? 3.746 -26.399 -5.427 1.00 20.86 ? 10 DG A N9 1
ATOM 219 C C8 . DG A 1 10 ? 4.633 -25.358 -5.336 1.00 22.14 ? 10 DG A C8 1
ATOM 220 N N7 . DG A 1 10 ? 4.049 -24.200 -5.223 1.00 22.02 ? 10 DG A N7 1
ATOM 221 C C5 . DG A 1 10 ? 2.695 -24.502 -5.193 1.00 19.61 ? 10 DG A C5 1
ATOM 222 C C6 . DG A 1 10 ? 1.571 -23.653 -5.103 1.00 17.69 ? 10 DG A C6 1
ATOM 223 O O6 . DG A 1 10 ? 1.547 -22.423 -5.005 1.00 16.49 ? 10 DG A O6 1
ATOM 224 N N1 . DG A 1 10 ? 0.378 -24.373 -5.114 1.00 18.42 ? 10 DG A N1 1
ATOM 225 C C2 . DG A 1 10 ? 0.286 -25.742 -5.260 1.00 21.19 ? 10 DG A C2 1
ATOM 226 N N2 . DG A 1 10 ? -0.943 -26.272 -5.271 1.00 18.17 ? 10 DG A N2 1
ATOM 227 N N3 . DG A 1 10 ? 1.329 -26.536 -5.352 1.00 20.29 ? 10 DG A N3 1
ATOM 228 C C4 . DG A 1 10 ? 2.495 -25.856 -5.301 1.00 19.77 ? 10 DG A C4 1
ATOM 229 P P . DG A 1 11 ? 4.889 -31.360 -7.363 1.00 44.18 ? 11 DG A P 1
ATOM 230 O OP1 . DG A 1 11 ? 4.838 -32.830 -7.108 1.00 48.76 ? 11 DG A OP1 1
ATOM 231 O OP2 . DG A 1 11 ? 5.753 -30.767 -8.441 1.00 38.03 ? 11 DG A OP2 1
ATOM 232 O "O5'" . DG A 1 11 ? 3.418 -30.878 -7.737 1.00 44.48 ? 11 DG A "O5'" 1
ATOM 233 C "C5'" . DG A 1 11 ? 2.264 -31.453 -7.116 1.00 35.90 ? 11 DG A "C5'" 1
ATOM 234 C "C4'" . DG A 1 11 ? 1.025 -31.002 -7.854 1.00 37.54 ? 11 DG A "C4'" 1
ATOM 235 O "O4'" . DG A 1 11 ? 0.772 -29.588 -7.660 1.00 30.84 ? 11 DG A "O4'" 1
ATOM 236 C "C3'" . DG A 1 11 ? 1.011 -31.243 -9.367 1.00 39.42 ? 11 DG A "C3'" 1
ATOM 237 O "O3'" . DG A 1 11 ? -0.287 -31.833 -9.601 1.00 45.22 ? 11 DG A "O3'" 1
ATOM 238 C "C2'" . DG A 1 11 ? 1.163 -29.843 -9.963 1.00 31.50 ? 11 DG A "C2'" 1
ATOM 239 C "C1'" . DG A 1 11 ? 0.468 -28.980 -8.912 1.00 28.94 ? 11 DG A "C1'" 1
ATOM 240 N N9 . DG A 1 11 ? 0.850 -27.566 -8.815 1.00 25.57 ? 11 DG A N9 1
ATOM 241 C C8 . DG A 1 11 ? 2.118 -27.041 -8.732 1.00 21.74 ? 11 DG A C8 1
ATOM 242 N N7 . DG A 1 11 ? 2.128 -25.741 -8.600 1.00 23.03 ? 11 DG A N7 1
ATOM 243 C C5 . DG A 1 11 ? 0.784 -25.397 -8.514 1.00 22.00 ? 11 DG A C5 1
ATOM 244 C C6 . DG A 1 11 ? 0.170 -24.136 -8.357 1.00 19.29 ? 11 DG A C6 1
ATOM 245 O O6 . DG A 1 11 ? 0.709 -23.036 -8.166 1.00 17.85 ? 11 DG A O6 1
ATOM 246 N N1 . DG A 1 11 ? -1.221 -24.234 -8.383 1.00 17.82 ? 11 DG A N1 1
ATOM 247 C C2 . DG A 1 11 ? -1.930 -25.409 -8.503 1.00 18.99 ? 11 DG A C2 1
ATOM 248 N N2 . DG A 1 11 ? -3.268 -25.312 -8.506 1.00 16.93 ? 11 DG A N2 1
ATOM 249 N N3 . DG A 1 11 ? -1.367 -26.590 -8.643 1.00 20.95 ? 11 DG A N3 1
ATOM 250 C C4 . DG A 1 11 ? -0.018 -26.509 -8.672 1.00 23.45 ? 11 DG A C4 1
ATOM 251 P P . DT A 1 12 ? -0.462 -33.065 -10.619 1.00 53.35 ? 12 DT A P 1
ATOM 252 O OP1 . DT A 1 12 ? 0.137 -32.651 -11.909 1.00 45.51 ? 12 DT A OP1 1
ATOM 253 O OP2 . DT A 1 12 ? -1.880 -33.497 -10.547 1.00 45.42 ? 12 DT A OP2 1
ATOM 254 O "O5'" . DT A 1 12 ? 0.437 -34.224 -9.980 1.00 41.91 ? 12 DT A "O5'" 1
HETATM 255 K K . K B 2 . ? -0.252 -20.503 -6.827 0.50 8.46 ? 101 K A K 1
HETATM 256 K K . K C 2 . ? -0.267 -20.734 -3.221 0.50 10.14 ? 102 K A K 1
HETATM 257 O O2 . LKO D 3 . ? 0.161 -15.205 4.777 0.50 41.97 ? 103 LKO A O2 1
HETATM 258 C C2 . LKO D 3 . ? -0.316 -16.487 4.933 0.50 43.67 ? 103 LKO A C2 1
HETATM 259 C C3 . LKO D 3 . ? 0.728 -17.369 5.036 0.50 43.55 ? 103 LKO A C3 1
HETATM 260 O O3 . LKO D 3 . ? -3.582 -24.971 5.505 0.50 46.71 ? 103 LKO A O3 1
HETATM 261 C C4 . LKO D 3 . ? -1.621 -16.905 5.074 0.50 43.72 ? 103 LKO A C4 1
HETATM 262 O O4 . LKO D 3 . ? -1.726 -26.969 5.276 0.50 42.53 ? 103 LKO A O4 1
HETATM 263 C C5 . LKO D 3 . ? -1.855 -18.255 5.340 0.50 41.02 ? 103 LKO A C5 1
HETATM 264 C C6 . LKO D 3 . ? -0.800 -19.179 5.330 0.50 40.99 ? 103 LKO A C6 1
HETATM 265 C C1 . LKO D 3 . ? 1.584 -15.312 4.851 0.50 45.43 ? 103 LKO A C1 1
HETATM 266 O O1 . LKO D 3 . ? 1.924 -16.687 5.053 0.50 43.72 ? 103 LKO A O1 1
HETATM 267 C C19 . LKO D 3 . ? -4.476 -23.974 4.987 0.50 39.70 ? 103 LKO A C19 1
HETATM 268 C C18 . LKO D 3 . ? -2.233 -24.685 5.376 0.50 42.57 ? 103 LKO A C18 1
HETATM 269 C C13 . LKO D 3 . ? -1.854 -23.317 5.406 0.50 40.89 ? 103 LKO A C13 1
HETATM 270 C C12 . LKO D 3 . ? -0.483 -22.973 5.194 0.50 41.63 ? 103 LKO A C12 1
HETATM 271 C C15 . LKO D 3 . ? 0.431 -24.022 4.924 0.50 44.04 ? 103 LKO A C15 1
HETATM 272 C C16 . LKO D 3 . ? 0.034 -25.330 4.895 0.50 42.06 ? 103 LKO A C16 1
HETATM 273 C C17 . LKO D 3 . ? -1.290 -25.677 5.151 0.50 42.20 ? 103 LKO A C17 1
HETATM 274 C C20 . LKO D 3 . ? -3.065 -27.259 4.879 0.50 39.39 ? 103 LKO A C20 1
HETATM 275 C C11 . LKO D 3 . ? -0.098 -21.591 5.186 0.50 40.74 ? 103 LKO A C11 1
HETATM 276 C C10 . LKO D 3 . ? -1.083 -20.625 5.345 0.50 42.57 ? 103 LKO A C10 1
HETATM 277 N N1 . LKO D 3 . ? -2.434 -21.024 5.480 0.50 43.10 ? 103 LKO A N1 1
HETATM 278 C C14 . LKO D 3 . ? -2.791 -22.302 5.554 0.50 42.61 ? 103 LKO A C14 1
HETATM 279 C C7 . LKO D 3 . ? 0.513 -18.721 5.199 0.50 41.82 ? 103 LKO A C7 1
HETATM 280 C C8 . LKO D 3 . ? -3.187 -18.710 5.855 0.50 41.28 ? 103 LKO A C8 1
HETATM 281 C C9 . LKO D 3 . ? -3.522 -20.042 5.230 0.50 44.85 ? 103 LKO A C9 1
HETATM 282 C C21 . LKO D 3 . ? 1.323 -21.179 4.858 0.50 42.58 ? 103 LKO A C21 1
HETATM 283 C C22 . LKO D 3 . ? 2.460 -22.048 5.489 0.50 39.63 ? 103 LKO A C22 1
HETATM 284 C C25 . LKO D 3 . ? 3.810 -21.390 5.283 0.50 40.37 ? 103 LKO A C25 1
HETATM 285 C C26 . LKO D 3 . ? 4.979 -22.131 5.265 0.50 37.55 ? 103 LKO A C26 1
HETATM 286 C C27 . LKO D 3 . ? 6.180 -21.490 5.034 0.50 37.07 ? 103 LKO A C27 1
HETATM 287 N N2 . LKO D 3 . ? 6.290 -20.174 4.841 0.50 39.13 ? 103 LKO A N2 1
HETATM 288 C C29 . LKO D 3 . ? 5.158 -19.464 4.874 0.50 38.09 ? 103 LKO A C29 1
HETATM 289 C C30 . LKO D 3 . ? 3.914 -20.022 5.080 0.50 39.43 ? 103 LKO A C30 1
HETATM 290 O O . HOH E 4 . ? 16.424 -23.834 0.886 1.00 49.38 ? 201 HOH A O 1
HETATM 291 O O . HOH E 4 . ? 7.611 -16.122 -10.057 1.00 40.90 ? 202 HOH A O 1
HETATM 292 O O . HOH E 4 . ? 8.375 -22.019 -6.067 1.00 41.80 ? 203 HOH A O 1
HETATM 293 O O . HOH E 4 . ? 11.406 -20.948 -5.990 1.00 57.78 ? 204 HOH A O 1
HETATM 294 O O . HOH E 4 . ? 20.685 -21.540 -7.755 0.50 29.34 ? 205 HOH A O 1
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