HEADER DNA 19-AUG-22 7YVX
TITLE LEFT-HANDED DNA DUPLEX CONTAINING CONSECUTIVE G-G BASE PAIRS
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: DNA (5'-D(*CP*GP*(CBR)P*GP*GP*GP*CP*GP*CP*G)-3');
COMPND 3 CHAIN: A;
COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 SYNTHETIC: YES;
SOURCE 3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT;
SOURCE 4 ORGANISM_TAXID: 32630
KEYWDS Z-FORM, DNA NANOTECHNOLOGY, DNA
EXPDTA X-RAY DIFFRACTION
AUTHOR J.KONDO
REVDAT 2 29-MAY-24 7YVX 1 REMARK
REVDAT 1 12-OCT-22 7YVX 0
JRNL AUTH J.KONDO
JRNL TITL LEFT-HANDED DNA DUPLEX CONTAINING CONSECUTIVE G-G BASE PAIRS
JRNL REF TO BE PUBLISHED
JRNL REFN
REMARK 2
REMARK 2 RESOLUTION. 2.99 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : PHENIX 1.17.1
REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN
REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,
REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,
REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,
REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON,
REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,
REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT
REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART
REMARK 3
REMARK 3 REFINEMENT TARGET : ML
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.99
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.56
REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.540
REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6
REMARK 3 NUMBER OF REFLECTIONS : 1538
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 R VALUE (WORKING + TEST SET) : 0.201
REMARK 3 R VALUE (WORKING SET) : 0.195
REMARK 3 FREE R VALUE : 0.255
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.690
REMARK 3 FREE R VALUE TEST SET COUNT : 149
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS).
REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE
REMARK 3 1 3.1600 - 2.9900 1.00 1389 149 0.1953 0.2550
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL
REMARK 3 SOLVENT RADIUS : 1.11
REMARK 3 SHRINKAGE RADIUS : 0.90
REMARK 3 K_SOL : NULL
REMARK 3 B_SOL : NULL
REMARK 3
REMARK 3 ERROR ESTIMATES.
REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.370
REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.900
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 54.54
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.35
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : NULL
REMARK 3 B22 (A**2) : NULL
REMARK 3 B33 (A**2) : NULL
REMARK 3 B12 (A**2) : NULL
REMARK 3 B13 (A**2) : NULL
REMARK 3 B23 (A**2) : NULL
REMARK 3
REMARK 3 TWINNING INFORMATION.
REMARK 3 FRACTION: NULL
REMARK 3 OPERATOR: NULL
REMARK 3
REMARK 3 DEVIATIONS FROM IDEAL VALUES.
REMARK 3 RMSD COUNT
REMARK 3 BOND : NULL NULL
REMARK 3 ANGLE : NULL NULL
REMARK 3 CHIRALITY : NULL NULL
REMARK 3 PLANARITY : NULL NULL
REMARK 3 DIHEDRAL : NULL NULL
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : NULL
REMARK 3
REMARK 3 NCS DETAILS
REMARK 3 NUMBER OF NCS GROUPS : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 7YVX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-AUG-22.
REMARK 100 THE DEPOSITION ID IS D_1300031738.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 21-DEC-21
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : NULL
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : PHOTON FACTORY
REMARK 200 BEAMLINE : BL-17A
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 1.605
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : PIXEL
REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS
REMARK 200 DATA SCALING SOFTWARE : XSCALE
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 1553
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.990
REMARK 200 RESOLUTION RANGE LOW (A) : 37.560
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7
REMARK 200 DATA REDUNDANCY : 10.00
REMARK 200 R MERGE (I) : 0.10100
REMARK 200 R SYM (I) : NULL
REMARK 200 FOR THE DATA SET : 18.6400
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.16
REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0
REMARK 200 DATA REDUNDANCY IN SHELL : 10.28
REMARK 200 R MERGE FOR SHELL (I) : 0.31800
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 FOR SHELL : 9.820
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 60.17
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.09
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: MPD, SODIUM CHLORIDE, HEXAMMINE COBALT
REMARK 280 CHLORIDE, SODIUM CACODYLATE, VAPOR DIFFUSION, HANGING DROP,
REMARK 280 TEMPERATURE 293K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 2 2
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -Y,X-Y,Z+1/3
REMARK 290 3555 -X+Y,-X,Z+2/3
REMARK 290 4555 -X,-Y,Z
REMARK 290 5555 Y,-X+Y,Z+1/3
REMARK 290 6555 X-Y,X,Z+2/3
REMARK 290 7555 Y,X,-Z+1/3
REMARK 290 8555 X-Y,-Y,-Z
REMARK 290 9555 -X,-X+Y,-Z+2/3
REMARK 290 10555 -Y,-X,-Z+1/3
REMARK 290 11555 -X+Y,Y,-Z
REMARK 290 12555 X,X-Y,-Z+2/3
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 23.99933
REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 47.99867
REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 23.99933
REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 47.99867
REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 23.99933
REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 47.99867
REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 23.99933
REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 47.99867
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 2480 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 3480 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000
REMARK 375
REMARK 375 SPECIAL POSITION
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL
REMARK 375 POSITIONS.
REMARK 375
REMARK 375 ATOM RES CSSEQI
REMARK 375 CO CO A 101 LIES ON A SPECIAL POSITION.
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION
REMARK 500 DC A 7 O3' DC A 7 C3' -0.055
REMARK 500
REMARK 500 REMARK: NULL
DBREF 7YVX A 1 10 PDB 7YVX 7YVX 1 10
SEQRES 1 A 10 DC DG CBR DG DG DG DC DG DC DG
HET CBR A 3 20
HET CO A 101 1
HET CO A 102 1
HET CO A 103 1
HETNAM CBR 5-BROMO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE
HETNAM CO COBALT (II) ION
FORMUL 1 CBR C9 H13 BR N3 O7 P
FORMUL 2 CO 3(CO 2+)
LINK O3' DG A 2 P CBR A 3 1555 1555 1.60
LINK O3' CBR A 3 P DG A 4 1555 1555 1.60
CRYST1 43.375 43.375 71.998 90.00 90.00 120.00 P 64 2 2 12
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.023055 0.013311 0.000000 0.00000
SCALE2 0.000000 0.026621 0.000000 0.00000
SCALE3 0.000000 0.000000 0.013889 0.00000
ATOM 1 O5' DC A 1 -16.235 -15.187 2.471 1.00 54.81 O
ATOM 2 C5' DC A 1 -16.247 -14.715 1.126 1.00 54.96 C
ATOM 3 C4' DC A 1 -14.834 -14.591 0.574 1.00 55.03 C
ATOM 4 O4' DC A 1 -13.887 -14.370 1.659 1.00 52.64 O
ATOM 5 C3' DC A 1 -14.312 -15.821 -0.152 1.00 57.69 C
ATOM 6 O3' DC A 1 -13.375 -15.418 -1.117 0.64 58.52 O
ATOM 7 C2' DC A 1 -13.635 -16.602 0.968 1.00 46.66 C
ATOM 8 C1' DC A 1 -12.983 -15.466 1.734 1.00 43.19 C
ATOM 9 N1 DC A 1 -12.741 -15.769 3.156 1.00 35.33 N
ATOM 10 C2 DC A 1 -11.533 -16.357 3.532 1.00 39.60 C
ATOM 11 O2 DC A 1 -10.693 -16.642 2.658 1.00 37.88 O
ATOM 12 N3 DC A 1 -11.312 -16.604 4.855 1.00 35.44 N
ATOM 13 C4 DC A 1 -12.261 -16.287 5.748 1.00 37.43 C
ATOM 14 N4 DC A 1 -12.023 -16.558 7.026 1.00 41.88 N
ATOM 15 C5 DC A 1 -13.493 -15.688 5.374 1.00 33.62 C
ATOM 16 C6 DC A 1 -13.687 -15.442 4.078 1.00 36.22 C
ATOM 17 P DG A 2 -13.579 -15.874 -2.634 1.00 68.36 P
ATOM 18 OP1 DG A 2 -15.019 -16.228 -2.766 1.00 51.85 O
ATOM 19 OP2 DG A 2 -12.475 -16.832 -2.904 1.00 58.49 O
ATOM 20 O5' DG A 2 -13.389 -14.531 -3.486 1.00 73.59 O
ATOM 21 C5' DG A 2 -12.596 -13.465 -2.980 1.00 72.13 C
ATOM 22 C4' DG A 2 -13.361 -12.150 -3.021 1.00 55.43 C
ATOM 23 O4' DG A 2 -14.377 -12.158 -1.999 1.00 58.29 O
ATOM 24 C3' DG A 2 -12.515 -10.922 -2.746 1.00 45.55 C
ATOM 25 O3' DG A 2 -12.015 -10.426 -3.961 1.00 42.48 O
ATOM 26 C2' DG A 2 -13.496 -9.938 -2.105 1.00 51.76 C
ATOM 27 C1' DG A 2 -14.591 -10.838 -1.518 1.00 54.24 C
ATOM 28 N9 DG A 2 -14.637 -10.883 -0.048 1.00 52.34 N
ATOM 29 C8 DG A 2 -15.714 -10.564 0.755 1.00 45.35 C
ATOM 30 N7 DG A 2 -15.479 -10.725 2.030 1.00 47.62 N
ATOM 31 C5 DG A 2 -14.165 -11.195 2.074 1.00 37.73 C
ATOM 32 C6 DG A 2 -13.373 -11.552 3.182 1.00 37.90 C
ATOM 33 O6 DG A 2 -13.679 -11.522 4.374 1.00 51.52 O
ATOM 34 N1 DG A 2 -12.115 -11.980 2.806 1.00 38.24 N
ATOM 35 C2 DG A 2 -11.677 -12.055 1.510 1.00 46.99 C
ATOM 36 N2 DG A 2 -10.415 -12.490 1.334 1.00 42.16 N
ATOM 37 N3 DG A 2 -12.412 -11.728 0.454 1.00 40.48 N
ATOM 38 C4 DG A 2 -13.640 -11.304 0.811 1.00 38.09 C
HETATM 39 BR CBR A 3 -13.881 -7.500 0.728 1.00112.39 BR
HETATM 40 P CBR A 3 -10.435 -10.453 -4.232 1.00 67.77 P
HETATM 41 OP1 CBR A 3 -10.061 -10.135 -5.679 1.00 71.53 O
HETATM 42 OP2 CBR A 3 -9.906 -11.773 -3.873 1.00 67.22 O
HETATM 43 O5' CBR A 3 -9.854 -9.249 -3.262 1.00 59.70 O
HETATM 44 N1 CBR A 3 -9.900 -8.581 0.936 1.00 45.74 N
HETATM 45 C6 CBR A 3 -11.063 -8.160 0.482 1.00 38.34 C
HETATM 46 C2 CBR A 3 -9.695 -8.908 2.226 1.00 44.27 C
HETATM 47 O2 CBR A 3 -8.376 -9.330 2.617 1.00 44.07 O
HETATM 48 N3 CBR A 3 -10.664 -8.844 3.115 1.00 39.73 N
HETATM 49 C4 CBR A 3 -11.868 -8.450 2.734 1.00 37.48 C
HETATM 50 N4 CBR A 3 -12.901 -8.414 3.727 1.00 38.07 N
HETATM 51 C5 CBR A 3 -12.112 -8.086 1.382 1.00 36.35 C
HETATM 52 C2' CBR A 3 -8.351 -10.100 -0.380 1.00 42.98 C
HETATM 53 C5' CBR A 3 -8.516 -8.881 -3.473 1.00 64.29 C
HETATM 54 C4' CBR A 3 -7.870 -8.647 -2.123 1.00 51.89 C
HETATM 55 O4' CBR A 3 -9.005 -8.041 -1.091 1.00 47.77 O
HETATM 56 C1' CBR A 3 -8.735 -8.642 0.042 1.00 44.42 C
HETATM 57 C3' CBR A 3 -7.437 -9.795 -1.601 1.00 43.39 C
HETATM 58 O3' CBR A 3 -6.078 -9.572 -1.096 1.00 42.35 O
ATOM 59 P DG A 4 -4.838 -9.982 -2.018 0.55 53.81 P
ATOM 60 OP1 DG A 4 -5.267 -11.273 -2.600 1.00 45.77 O
ATOM 61 OP2 DG A 4 -3.540 -9.737 -1.335 1.00 47.34 O
ATOM 62 O5' DG A 4 -4.895 -8.947 -3.209 0.50 52.01 O
ATOM 63 C5' DG A 4 -4.322 -7.676 -3.092 1.00 48.23 C
ATOM 64 C4' DG A 4 -4.729 -6.892 -4.312 1.00 55.56 C
ATOM 65 O4' DG A 4 -6.163 -6.717 -4.307 1.00 57.06 O
ATOM 66 C3' DG A 4 -4.119 -5.515 -4.496 1.00 55.13 C
ATOM 67 O3' DG A 4 -3.798 -5.382 -5.885 1.00 70.17 O
ATOM 68 C2' DG A 4 -5.264 -4.580 -4.069 1.00 47.74 C
ATOM 69 C1' DG A 4 -6.482 -5.364 -4.505 1.00 45.68 C
ATOM 70 N9 DG A 4 -7.704 -5.114 -3.749 1.00 38.66 N
ATOM 71 C8 DG A 4 -8.957 -4.924 -4.277 1.00 45.28 C
ATOM 72 N7 DG A 4 -9.884 -4.774 -3.381 1.00 45.70 N
ATOM 73 C5 DG A 4 -9.198 -4.893 -2.179 1.00 43.95 C
ATOM 74 C6 DG A 4 -9.682 -4.821 -0.863 1.00 43.74 C
ATOM 75 O6 DG A 4 -10.846 -4.638 -0.492 1.00 49.23 O
ATOM 76 N1 DG A 4 -8.675 -4.999 0.069 1.00 42.86 N
ATOM 77 C2 DG A 4 -7.361 -5.215 -0.236 1.00 50.67 C
ATOM 78 N2 DG A 4 -6.524 -5.356 0.809 1.00 51.22 N
ATOM 79 N3 DG A 4 -6.891 -5.280 -1.476 1.00 47.06 N
ATOM 80 C4 DG A 4 -7.863 -5.116 -2.390 1.00 38.87 C
ATOM 81 P DG A 5 -2.798 -4.260 -6.460 1.00 88.50 P
ATOM 82 OP1 DG A 5 -1.979 -4.953 -7.474 1.00 78.83 O
ATOM 83 OP2 DG A 5 -2.069 -3.561 -5.364 1.00 68.81 O
ATOM 84 O5' DG A 5 -3.816 -3.316 -7.258 1.00 61.08 O
ATOM 85 C5' DG A 5 -4.906 -3.944 -7.953 1.00 61.06 C
ATOM 86 C4' DG A 5 -6.036 -2.972 -8.293 1.00 66.88 C
ATOM 87 O4' DG A 5 -7.000 -2.884 -7.201 1.00 62.67 O
ATOM 88 C3' DG A 5 -5.639 -1.528 -8.605 1.00 67.18 C
ATOM 89 O3' DG A 5 -6.573 -1.025 -9.600 1.00 84.77 O
ATOM 90 C2' DG A 5 -5.832 -0.861 -7.246 1.00 60.72 C
ATOM 91 C1' DG A 5 -7.125 -1.528 -6.802 1.00 61.65 C
ATOM 92 N9 DG A 5 -7.339 -1.498 -5.366 1.00 53.36 N
ATOM 93 C8 DG A 5 -6.378 -1.421 -4.392 1.00 48.20 C
ATOM 94 N7 DG A 5 -6.874 -1.439 -3.184 1.00 52.17 N
ATOM 95 C5 DG A 5 -8.243 -1.539 -3.375 1.00 39.80 C
ATOM 96 C6 DG A 5 -9.289 -1.607 -2.428 1.00 42.81 C
ATOM 97 O6 DG A 5 -9.205 -1.597 -1.195 1.00 47.00 O
ATOM 98 N1 DG A 5 -10.535 -1.698 -3.036 1.00 43.98 N
ATOM 99 C2 DG A 5 -10.737 -1.731 -4.395 1.00 50.86 C
ATOM 100 N2 DG A 5 -12.017 -1.825 -4.804 1.00 51.06 N
ATOM 101 N3 DG A 5 -9.753 -1.679 -5.297 1.00 49.02 N
ATOM 102 C4 DG A 5 -8.544 -1.580 -4.713 1.00 40.87 C
ATOM 103 P DG A 6 -6.728 0.539 -9.956 1.00 71.27 P
ATOM 104 OP1 DG A 6 -7.128 0.528 -11.378 1.00 75.90 O
ATOM 105 OP2 DG A 6 -5.516 1.283 -9.519 1.00 49.08 O
ATOM 106 O5' DG A 6 -8.051 0.999 -9.166 1.00 61.88 O
ATOM 107 C5' DG A 6 -9.309 1.020 -9.854 1.00 56.19 C
ATOM 108 C4' DG A 6 -10.466 1.227 -8.887 1.00 65.34 C
ATOM 109 O4' DG A 6 -10.220 0.464 -7.686 1.00 75.42 O
ATOM 110 C3' DG A 6 -10.675 2.650 -8.385 1.00 64.41 C
ATOM 111 O3' DG A 6 -11.480 3.372 -9.272 1.00 80.28 O
ATOM 112 C2' DG A 6 -11.420 2.406 -7.081 1.00 57.20 C
ATOM 113 C1' DG A 6 -10.689 1.186 -6.556 1.00 62.32 C
ATOM 114 N9 DG A 6 -9.546 1.506 -5.696 1.00 55.80 N
ATOM 115 C8 DG A 6 -8.237 1.755 -6.079 1.00 52.91 C
ATOM 116 N7 DG A 6 -7.444 2.008 -5.069 1.00 48.70 N
ATOM 117 C5 DG A 6 -8.284 1.902 -3.949 1.00 51.65 C
ATOM 118 C6 DG A 6 -7.997 2.052 -2.573 1.00 48.03 C
ATOM 119 O6 DG A 6 -6.916 2.314 -2.040 1.00 55.57 O
ATOM 120 N1 DG A 6 -9.127 1.875 -1.790 1.00 37.31 N
ATOM 121 C2 DG A 6 -10.377 1.577 -2.266 1.00 43.34 C
ATOM 122 N2 DG A 6 -11.348 1.426 -1.349 1.00 44.30 N
ATOM 123 N3 DG A 6 -10.661 1.424 -3.545 1.00 47.19 N
ATOM 124 C4 DG A 6 -9.569 1.599 -4.324 1.00 50.63 C
ATOM 125 P DC A 7 -10.922 4.703 -9.970 1.00 74.92 P
ATOM 126 OP1 DC A 7 -12.092 5.551 -10.273 1.00 69.62 O
ATOM 127 OP2 DC A 7 -9.964 4.262 -11.015 1.00 62.55 O
ATOM 128 O5' DC A 7 -10.040 5.443 -8.863 1.00 48.96 O
ATOM 129 C5' DC A 7 -9.023 6.339 -9.314 1.00 59.89 C
ATOM 130 C4' DC A 7 -8.214 6.910 -8.172 1.00 47.57 C
ATOM 131 O4' DC A 7 -9.043 7.036 -6.986 1.00 49.70 O
ATOM 132 C3' DC A 7 -7.030 6.072 -7.752 1.00 40.21 C
ATOM 133 O3' DC A 7 -5.983 6.904 -7.483 1.00 36.56 O
ATOM 134 C2' DC A 7 -7.518 5.417 -6.473 1.00 51.11 C
ATOM 135 C1' DC A 7 -8.325 6.538 -5.889 1.00 37.64 C
ATOM 136 N1 DC A 7 -9.285 6.086 -4.904 1.00 43.63 N
ATOM 137 C2 DC A 7 -8.868 5.856 -3.591 1.00 44.02 C
ATOM 138 O2 DC A 7 -7.683 6.055 -3.292 1.00 47.05 O
ATOM 139 N3 DC A 7 -9.780 5.427 -2.683 1.00 39.62 N
ATOM 140 C4 DC A 7 -11.043 5.242 -3.052 1.00 45.71 C
ATOM 141 N4 DC A 7 -11.907 4.823 -2.133 1.00 54.98 N
ATOM 142 C5 DC A 7 -11.483 5.474 -4.388 1.00 47.83 C
ATOM 143 C6 DC A 7 -10.578 5.891 -5.271 1.00 47.60 C
ATOM 144 P DG A 8 -4.811 7.053 -8.558 1.00 65.27 P
ATOM 145 OP1 DG A 8 -4.827 5.797 -9.338 1.00 57.81 O
ATOM 146 OP2 DG A 8 -3.570 7.541 -7.874 1.00 41.30 O
ATOM 147 O5' DG A 8 -5.375 8.191 -9.502 1.00 64.42 O
ATOM 148 C5' DG A 8 -5.601 9.462 -8.965 1.00 51.27 C
ATOM 149 C4' DG A 8 -6.249 10.343 -9.993 1.00 43.09 C
ATOM 150 O4' DG A 8 -7.501 9.757 -10.382 1.00 48.14 O
ATOM 151 C3' DG A 8 -6.528 11.757 -9.527 1.00 37.94 C
ATOM 152 O3' DG A 8 -5.430 12.555 -9.980 1.00 53.97 O
ATOM 153 C2' DG A 8 -7.851 12.110 -10.219 1.00 37.82 C
ATOM 154 C1' DG A 8 -8.486 10.748 -10.541 1.00 42.75 C
ATOM 155 N9 DG A 8 -9.622 10.347 -9.715 1.00 38.41 N
ATOM 156 C8 DG A 8 -10.867 9.981 -10.161 1.00 37.73 C
ATOM 157 N7 DG A 8 -11.674 9.608 -9.206 1.00 38.24 N
ATOM 158 C5 DG A 8 -10.904 9.722 -8.052 1.00 36.66 C
ATOM 159 C6 DG A 8 -11.244 9.447 -6.706 1.00 39.93 C
ATOM 160 O6 DG A 8 -12.339 9.041 -6.249 1.00 44.55 O
ATOM 161 N1 DG A 8 -10.166 9.677 -5.851 1.00 31.52 N
ATOM 162 C2 DG A 8 -8.930 10.111 -6.250 1.00 36.16 C
ATOM 163 N2 DG A 8 -8.016 10.282 -5.282 1.00 34.33 N
ATOM 164 N3 DG A 8 -8.605 10.365 -7.512 1.00 36.49 N
ATOM 165 C4 DG A 8 -9.636 10.148 -8.354 1.00 35.02 C
ATOM 166 P DC A 9 -5.268 14.124 -9.649 1.00 65.83 P
ATOM 167 OP1 DC A 9 -6.598 14.770 -9.623 1.00 58.94 O
ATOM 168 OP2 DC A 9 -4.206 14.644 -10.547 1.00 52.27 O
ATOM 169 O5' DC A 9 -4.715 14.186 -8.161 1.00 52.60 O
ATOM 170 C5' DC A 9 -4.627 15.465 -7.527 1.00 54.89 C
ATOM 171 C4' DC A 9 -5.361 15.473 -6.203 1.00 48.91 C
ATOM 172 O4' DC A 9 -6.778 15.321 -6.418 1.00 38.84 O
ATOM 173 C3' DC A 9 -4.966 14.347 -5.237 1.00 46.19 C
ATOM 174 O3' DC A 9 -4.491 14.885 -4.052 1.00 41.23 O
ATOM 175 C2' DC A 9 -6.277 13.601 -4.986 1.00 42.55 C
ATOM 176 C1' DC A 9 -7.300 14.664 -5.300 1.00 28.95 C
ATOM 177 N1 DC A 9 -8.584 14.110 -5.638 1.00 29.20 N
ATOM 178 C2 DC A 9 -9.359 13.548 -4.635 1.00 37.48 C
ATOM 179 O2 DC A 9 -8.918 13.548 -3.473 1.00 40.56 O
ATOM 180 N3 DC A 9 -10.580 13.016 -4.955 1.00 33.86 N
ATOM 181 C4 DC A 9 -10.992 13.047 -6.226 1.00 37.78 C
ATOM 182 N4 DC A 9 -12.176 12.524 -6.515 1.00 33.31 N
ATOM 183 C5 DC A 9 -10.196 13.619 -7.262 1.00 37.00 C
ATOM 184 C6 DC A 9 -9.007 14.129 -6.925 1.00 33.56 C
ATOM 185 P DG A 10 -2.968 15.335 -3.943 1.00 59.75 P
ATOM 186 OP1 DG A 10 -2.170 14.285 -4.619 1.00 57.04 O
ATOM 187 OP2 DG A 10 -2.753 15.730 -2.525 1.00 78.41 O
ATOM 188 O5' DG A 10 -2.901 16.680 -4.802 1.00 62.07 O
ATOM 189 C5' DG A 10 -2.743 17.937 -4.148 1.00 63.56 C
ATOM 190 C4' DG A 10 -2.853 19.075 -5.147 1.00 55.07 C
ATOM 191 O4' DG A 10 -3.721 18.661 -6.242 1.00 61.08 O
ATOM 192 C3' DG A 10 -3.434 20.366 -4.565 1.00 59.53 C
ATOM 193 O3' DG A 10 -2.462 21.466 -4.644 1.00 62.07 O
ATOM 194 C2' DG A 10 -4.721 20.623 -5.386 1.00 53.37 C
ATOM 195 C1' DG A 10 -4.576 19.708 -6.608 1.00 43.59 C
ATOM 196 N9 DG A 10 -5.849 19.144 -7.130 1.00 43.27 N
ATOM 197 C8 DG A 10 -6.179 19.017 -8.451 1.00 47.02 C
ATOM 198 N7 DG A 10 -7.363 18.514 -8.654 1.00 38.90 N
ATOM 199 C5 DG A 10 -7.862 18.277 -7.391 1.00 35.17 C
ATOM 200 C6 DG A 10 -9.114 17.720 -6.998 1.00 38.78 C
ATOM 201 O6 DG A 10 -10.039 17.325 -7.722 1.00 39.48 O
ATOM 202 N1 DG A 10 -9.239 17.630 -5.623 1.00 32.82 N
ATOM 203 C2 DG A 10 -8.284 18.038 -4.735 1.00 34.17 C
ATOM 204 N2 DG A 10 -8.591 17.872 -3.442 1.00 37.36 N
ATOM 205 N3 DG A 10 -7.101 18.568 -5.083 1.00 34.81 N
ATOM 206 C4 DG A 10 -6.957 18.655 -6.426 1.00 35.52 C
TER 207 DG A 10
HETATM 208 CO CO A 101 -4.512 0.000 0.000 0.50 87.35 CO
HETATM 209 CO CO A 102 -9.576 18.381 -11.462 0.47 84.09 CO
HETATM 210 CO CO A 103 -6.966 3.762 -13.652 1.00120.24 CO
CONECT 25 40
CONECT 39 51
CONECT 40 25 41 42 43
CONECT 41 40
CONECT 42 40
CONECT 43 40 53
CONECT 44 45 46 56
CONECT 45 44 51
CONECT 46 44 47 48
CONECT 47 46
CONECT 48 46 49
CONECT 49 48 50 51
CONECT 50 49
CONECT 51 39 45 49
CONECT 52 56 57
CONECT 53 43 54
CONECT 54 53 55 57
CONECT 55 54 56
CONECT 56 44 52 55
CONECT 57 52 54 58
CONECT 58 57 59
CONECT 59 58
MASTER 255 0 4 0 0 0 0 6 209 1 22 1
END