data_7K3X
#
_entry.id 7K3X
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.389
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 7K3X pdb_00007k3x 10.2210/pdb7k3x/pdb
WWPDB D_1000251833 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2021-11-10
2 'Structure model' 1 1 2022-06-01
3 'Structure model' 1 2 2022-06-15
4 'Structure model' 1 3 2022-07-06
5 'Structure model' 1 4 2024-04-03
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Database references'
2 3 'Structure model' 'Database references'
3 4 'Structure model' 'Database references'
4 4 'Structure model' 'Derived calculations'
5 5 'Structure model' 'Data collection'
6 5 'Structure model' 'Refinement description'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 2 'Structure model' citation
2 2 'Structure model' citation_author
3 3 'Structure model' citation
4 3 'Structure model' citation_author
5 4 'Structure model' atom_type
6 4 'Structure model' citation
7 5 'Structure model' chem_comp_atom
8 5 'Structure model' chem_comp_bond
9 5 'Structure model' pdbx_initial_refinement_model
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 2 'Structure model' '_citation.country'
2 2 'Structure model' '_citation.journal_abbrev'
3 2 'Structure model' '_citation.journal_id_CSD'
4 2 'Structure model' '_citation.journal_id_ISSN'
5 2 'Structure model' '_citation.pdbx_database_id_DOI'
6 2 'Structure model' '_citation.year'
7 3 'Structure model' '_citation.pdbx_database_id_PubMed'
8 3 'Structure model' '_citation.title'
9 3 'Structure model' '_citation_author.identifier_ORCID'
10 3 'Structure model' '_citation_author.name'
11 4 'Structure model' '_atom_type.pdbx_N_electrons'
12 4 'Structure model' '_atom_type.pdbx_scat_Z'
13 4 'Structure model' '_citation.journal_volume'
14 4 'Structure model' '_citation.page_first'
15 4 'Structure model' '_citation.page_last'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.entry_id 7K3X
_pdbx_database_status.recvd_initial_deposition_date 2020-09-14
_pdbx_database_status.SG_entry N
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.pdb_format_compatible Y
#
_pdbx_database_related.db_name PDB
_pdbx_database_related.details '7K3C contains the wild type sequence'
_pdbx_database_related.db_id 7K3C
_pdbx_database_related.content_type unspecified
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
_audit_author.identifier_ORCID
'Murray, K.A.' 1 0000-0003-1969-7701
'Sawaya, M.R.' 2 0000-0003-0874-9043
'Eisenberg, D.S.' 3 0000-0003-2432-5419
#
_citation.abstract ?
_citation.abstract_id_CAS ?
_citation.book_id_ISBN ?
_citation.book_publisher ?
_citation.book_publisher_city ?
_citation.book_title ?
_citation.coordinate_linkage ?
_citation.country US
_citation.database_id_Medline ?
_citation.details ?
_citation.id primary
_citation.journal_abbrev Nat.Struct.Mol.Biol.
_citation.journal_id_ASTM ?
_citation.journal_id_CSD ?
_citation.journal_id_ISSN 1545-9985
_citation.journal_full ?
_citation.journal_issue ?
_citation.journal_volume 29
_citation.language ?
_citation.page_first 529
_citation.page_last 536
_citation.title
'Identifying amyloid-related diseases by mapping mutations in low-complexity protein domains to pathologies.'
_citation.year 2022
_citation.database_id_CSD ?
_citation.pdbx_database_id_DOI 10.1038/s41594-022-00774-y
_citation.pdbx_database_id_PubMed 35637421
_citation.unpublished_flag ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Murray, K.A.' 1 ?
primary 'Hughes, M.P.' 2 ?
primary 'Hu, C.J.' 3 ?
primary 'Sawaya, M.R.' 4 ?
primary 'Salwinski, L.' 5 ?
primary 'Pan, H.' 6 ?
primary 'French, S.W.' 7 ?
primary 'Seidler, P.M.' 8 ?
primary 'Eisenberg, D.S.' 9 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn 'SGMGCIT segment 58-64 from Keratin-8 with G62C mutation' 667.797 1 ? ? ? ?
2 non-polymer syn 'ISOPROPYL ALCOHOL' 60.095 1 ? ? ? ?
3 water nat water 18.015 1 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code SGMGCIT
_entity_poly.pdbx_seq_one_letter_code_can SGMGCIT
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2 'ISOPROPYL ALCOHOL' IPA
3 water HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 SER n
1 2 GLY n
1 3 MET n
1 4 GLY n
1 5 CYS n
1 6 ILE n
1 7 THR n
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num 1
_pdbx_entity_src_syn.pdbx_end_seq_num 7
_pdbx_entity_src_syn.organism_scientific 'Homo sapiens'
_pdbx_entity_src_syn.organism_common_name ?
_pdbx_entity_src_syn.ncbi_taxonomy_id 9606
_pdbx_entity_src_syn.details ?
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067
HOH non-polymer . WATER ? 'H2 O' 18.015
ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173
IPA non-polymer . 'ISOPROPYL ALCOHOL' 2-PROPANOL 'C3 H8 O' 60.095
MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211
SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093
THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 SER 1 58 58 SER SER A . n
A 1 2 GLY 2 59 59 GLY GLY A . n
A 1 3 MET 3 60 60 MET MET A . n
A 1 4 GLY 4 61 61 GLY GLY A . n
A 1 5 CYS 5 62 62 CYS CYS A . n
A 1 6 ILE 6 63 63 ILE ILE A . n
A 1 7 THR 7 64 64 THR THR A . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 IPA 1 101 1 IPA IPA A .
C 3 HOH 1 201 2 HOH HOH A .
#
loop_
_software.citation_id
_software.classification
_software.compiler_name
_software.compiler_version
_software.contact_author
_software.contact_author_email
_software.date
_software.description
_software.dependencies
_software.hardware
_software.language
_software.location
_software.mods
_software.name
_software.os
_software.os_version
_software.type
_software.version
_software.pdbx_ordinal
? 'data reduction' ? ? 'Zbyszek Otwinowski' hkl@hkl-xray.com ? ? ? ? ? http://www.hkl-xray.com/ ? DENZO
? ? program . 1
? 'data scaling' ? ? 'Zbyszek Otwinowski' hkl@hkl-xray.com ? ? ? ? ? http://www.hkl-xray.com/ ? SCALEPACK
? ? program . 2
? phasing ? ? 'Randy J. Read' cimr-phaser@lists.cam.ac.uk
'Thu Apr 26 13:39:35 2018 (svn 8338) (git 7364, 1318674... )' ? ? ? ? http://www-structmed.cimr.cam.ac.uk/phaser/ ?
PHASER ? ? program 2.8.2 3
? refinement ? ? 'Garib N. Murshudov' garib@ysbl.york.ac.uk ? ? ? ? Fortran_77
http://www.ccp4.ac.uk/dist/html/refmac5.html ? REFMAC ? ? program 5.8.0266 4
? 'data extraction' ? ? PDB deposit@deposit.rcsb.org 'Apr. 1, 2019' ? ? ? C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/ ? PDB_EXTRACT ? ? package 3.25 5
#
_cell.angle_alpha 90.000
_cell.angle_alpha_esd ?
_cell.angle_beta 103.330
_cell.angle_beta_esd ?
_cell.angle_gamma 90.000
_cell.angle_gamma_esd ?
_cell.entry_id 7K3X
_cell.details ?
_cell.formula_units_Z ?
_cell.length_a 4.740
_cell.length_a_esd ?
_cell.length_b 46.170
_cell.length_b_esd ?
_cell.length_c 10.330
_cell.length_c_esd ?
_cell.volume ?
_cell.volume_esd ?
_cell.Z_PDB 2
_cell.reciprocal_angle_alpha ?
_cell.reciprocal_angle_beta ?
_cell.reciprocal_angle_gamma ?
_cell.reciprocal_angle_alpha_esd ?
_cell.reciprocal_angle_beta_esd ?
_cell.reciprocal_angle_gamma_esd ?
_cell.reciprocal_length_a ?
_cell.reciprocal_length_b ?
_cell.reciprocal_length_c ?
_cell.reciprocal_length_a_esd ?
_cell.reciprocal_length_b_esd ?
_cell.reciprocal_length_c_esd ?
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 7K3X
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 4
_symmetry.space_group_name_Hall ?
_symmetry.space_group_name_H-M 'P 1 21 1'
_symmetry.pdbx_full_space_group_name_H-M ?
#
_exptl.absorpt_coefficient_mu ?
_exptl.absorpt_correction_T_max ?
_exptl.absorpt_correction_T_min ?
_exptl.absorpt_correction_type ?
_exptl.absorpt_process_details ?
_exptl.entry_id 7K3X
_exptl.crystals_number 1
_exptl.details ?
_exptl.method 'X-RAY DIFFRACTION'
_exptl.method_details ?
#
_exptl_crystal.colour ?
_exptl_crystal.density_diffrn ?
_exptl_crystal.density_Matthews 1.65
_exptl_crystal.density_method ?
_exptl_crystal.density_percent_sol 25.32
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.id 1
_exptl_crystal.preparation ?
_exptl_crystal.size_max ?
_exptl_crystal.size_mid ?
_exptl_crystal.size_min ?
_exptl_crystal.size_rad ?
_exptl_crystal.colour_lustre ?
_exptl_crystal.colour_modifier ?
_exptl_crystal.colour_primary ?
_exptl_crystal.density_meas ?
_exptl_crystal.density_meas_esd ?
_exptl_crystal.density_meas_gt ?
_exptl_crystal.density_meas_lt ?
_exptl_crystal.density_meas_temp ?
_exptl_crystal.density_meas_temp_esd ?
_exptl_crystal.density_meas_temp_gt ?
_exptl_crystal.density_meas_temp_lt ?
_exptl_crystal.pdbx_crystal_image_url ?
_exptl_crystal.pdbx_crystal_image_format ?
_exptl_crystal.pdbx_mosaicity ?
_exptl_crystal.pdbx_mosaicity_esd ?
#
_exptl_crystal_grow.apparatus ?
_exptl_crystal_grow.atmosphere ?
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.details ?
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.method_ref ?
_exptl_crystal_grow.pH 7.5
_exptl_crystal_grow.pressure ?
_exptl_crystal_grow.pressure_esd ?
_exptl_crystal_grow.seeding ?
_exptl_crystal_grow.seeding_ref ?
_exptl_crystal_grow.temp 298
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.temp_esd ?
_exptl_crystal_grow.time ?
_exptl_crystal_grow.pdbx_details '0.2M sodium citrate tribasic dehydrate, 0.1M HEPES (pH 7.5), 20% v/v 2-propanol'
_exptl_crystal_grow.pdbx_pH_range ?
#
_diffrn.ambient_environment ?
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.ambient_temp_esd ?
_diffrn.crystal_id 1
_diffrn.crystal_support ?
_diffrn.crystal_treatment ?
_diffrn.details ?
_diffrn.id 1
_diffrn.ambient_pressure ?
_diffrn.ambient_pressure_esd ?
_diffrn.ambient_pressure_gt ?
_diffrn.ambient_pressure_lt ?
_diffrn.ambient_temp_gt ?
_diffrn.ambient_temp_lt ?
_diffrn.pdbx_serial_crystal_experiment N
#
_diffrn_detector.details ?
_diffrn_detector.detector PIXEL
_diffrn_detector.diffrn_id 1
_diffrn_detector.type 'DECTRIS PILATUS 6M-F'
_diffrn_detector.area_resol_mean ?
_diffrn_detector.dtime ?
_diffrn_detector.pdbx_frames_total ?
_diffrn_detector.pdbx_collection_time_total ?
_diffrn_detector.pdbx_collection_date 2018-06-26
_diffrn_detector.pdbx_frequency ?
#
_diffrn_radiation.collimation ?
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.filter_edge ?
_diffrn_radiation.inhomogeneity ?
_diffrn_radiation.monochromator ?
_diffrn_radiation.polarisn_norm ?
_diffrn_radiation.polarisn_ratio ?
_diffrn_radiation.probe ?
_diffrn_radiation.type ?
_diffrn_radiation.xray_symbol ?
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.pdbx_wavelength_list ?
_diffrn_radiation.pdbx_wavelength ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_analyzer ?
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 0.9791
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.current ?
_diffrn_source.details ?
_diffrn_source.diffrn_id 1
_diffrn_source.power ?
_diffrn_source.size ?
_diffrn_source.source SYNCHROTRON
_diffrn_source.target ?
_diffrn_source.type 'APS BEAMLINE 24-ID-C'
_diffrn_source.voltage ?
_diffrn_source.take-off_angle ?
_diffrn_source.pdbx_wavelength_list 0.9791
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_synchrotron_beamline 24-ID-C
_diffrn_source.pdbx_synchrotron_site APS
#
_reflns.B_iso_Wilson_estimate ?
_reflns.entry_id 7K3X
_reflns.data_reduction_details ?
_reflns.data_reduction_method ?
_reflns.d_resolution_high 1.700
_reflns.d_resolution_low 100.000
_reflns.details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.number_all ?
_reflns.number_obs 472
_reflns.observed_criterion ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.observed_criterion_I_max ?
_reflns.observed_criterion_I_min ?
_reflns.observed_criterion_sigma_F ?
_reflns.observed_criterion_sigma_I ?
_reflns.percent_possible_obs 93.500
_reflns.R_free_details ?
_reflns.Rmerge_F_all ?
_reflns.Rmerge_F_obs ?
_reflns.Friedel_coverage ?
_reflns.number_gt ?
_reflns.threshold_expression ?
_reflns.pdbx_redundancy 4.400
_reflns.pdbx_Rmerge_I_obs 0.192
_reflns.pdbx_Rmerge_I_all ?
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_av_sigmaI ?
_reflns.pdbx_netI_over_sigmaI 4.300
_reflns.pdbx_res_netI_over_av_sigmaI_2 ?
_reflns.pdbx_res_netI_over_sigmaI_2 ?
_reflns.pdbx_chi_squared 2.040
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_d_res_high_opt ?
_reflns.pdbx_d_res_low_opt ?
_reflns.pdbx_d_res_opt_method ?
_reflns.phase_calculation_details ?
_reflns.pdbx_Rrim_I_all 0.219
_reflns.pdbx_Rpim_I_all 0.102
_reflns.pdbx_d_opt ?
_reflns.pdbx_number_measured_all 2087
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
_reflns.pdbx_CC_half ?
_reflns.pdbx_CC_star ?
_reflns.pdbx_R_split ?
#
loop_
_reflns_shell.d_res_high
_reflns_shell.d_res_low
_reflns_shell.meanI_over_sigI_all
_reflns_shell.meanI_over_sigI_obs
_reflns_shell.number_measured_all
_reflns_shell.number_measured_obs
_reflns_shell.number_possible
_reflns_shell.number_unique_all
_reflns_shell.number_unique_obs
_reflns_shell.percent_possible_all
_reflns_shell.percent_possible_obs
_reflns_shell.Rmerge_F_all
_reflns_shell.Rmerge_F_obs
_reflns_shell.Rmerge_I_all
_reflns_shell.Rmerge_I_obs
_reflns_shell.meanI_over_sigI_gt
_reflns_shell.meanI_over_uI_all
_reflns_shell.meanI_over_uI_gt
_reflns_shell.number_measured_gt
_reflns_shell.number_unique_gt
_reflns_shell.percent_possible_gt
_reflns_shell.Rmerge_F_gt
_reflns_shell.Rmerge_I_gt
_reflns_shell.pdbx_redundancy
_reflns_shell.pdbx_Rsym_value
_reflns_shell.pdbx_chi_squared
_reflns_shell.pdbx_netI_over_sigmaI_all
_reflns_shell.pdbx_netI_over_sigmaI_obs
_reflns_shell.pdbx_Rrim_I_all
_reflns_shell.pdbx_Rpim_I_all
_reflns_shell.pdbx_rejects
_reflns_shell.pdbx_ordinal
_reflns_shell.pdbx_diffrn_id
_reflns_shell.pdbx_CC_half
_reflns_shell.pdbx_CC_star
_reflns_shell.pdbx_R_split
1.700 1.760 ? ? ? ? ? ? 40 71.400 ? ? ? ? 0.947 ? ? ? ? ? ? ? ? 2.600 ? 1.840 ? ? 1.149 0.636 ? 1 1 0.026 ? ?
1.760 1.830 ? ? ? ? ? ? 32 100.000 ? ? ? ? 0.829 ? ? ? ? ? ? ? ? 3.800 ? 1.492 ? ? 0.937 0.433 ? 2 1 0.567 ? ?
1.830 1.910 ? ? ? ? ? ? 51 100.000 ? ? ? ? 0.633 ? ? ? ? ? ? ? ? 3.800 ? 1.629 ? ? 0.739 0.371 ? 3 1 0.408 ? ?
1.910 2.020 ? ? ? ? ? ? 46 88.500 ? ? ? ? 0.338 ? ? ? ? ? ? ? ? 3.700 ? 1.465 ? ? 0.395 0.199 ? 4 1 0.783 ? ?
2.020 2.140 ? ? ? ? ? ? 55 93.200 ? ? ? ? 0.325 ? ? ? ? ? ? ? ? 4.500 ? 2.009 ? ? 0.364 0.161 ? 5 1 0.973 ? ?
2.140 2.310 ? ? ? ? ? ? 51 100.000 ? ? ? ? 0.297 ? ? ? ? ? ? ? ? 6.000 ? 1.639 ? ? 0.328 0.136 ? 6 1 0.972 ? ?
2.310 2.540 ? ? ? ? ? ? 54 98.200 ? ? ? ? 0.241 ? ? ? ? ? ? ? ? 4.800 ? 1.565 ? ? 0.271 0.121 ? 7 1 0.989 ? ?
2.540 2.910 ? ? ? ? ? ? 32 91.400 ? ? ? ? 0.166 ? ? ? ? ? ? ? ? 4.200 ? 1.535 ? ? 0.210 0.124 ? 8 1 0.974 ? ?
2.910 3.660 ? ? ? ? ? ? 55 100.000 ? ? ? ? 0.185 ? ? ? ? ? ? ? ? 5.000 ? 2.722 ? ? 0.208 0.094 ? 9 1 0.980 ? ?
3.660 100.000 ? ? ? ? ? ? 56 94.900 ? ? ? ? 0.123 ? ? ? ? ? ? ? ? 4.800 ? 3.441 ? ? 0.139 0.062 ? 10 1 0.976 ? ?
#
_refine.aniso_B[1][1] -11.407
_refine.aniso_B[1][2] -0.000
_refine.aniso_B[1][3] -4.262
_refine.aniso_B[2][2] 1.134
_refine.aniso_B[2][3] 0.000
_refine.aniso_B[3][3] 10.273
_refine.B_iso_max ?
_refine.B_iso_mean 22.999
_refine.B_iso_min ?
_refine.correlation_coeff_Fo_to_Fc 0.931
_refine.correlation_coeff_Fo_to_Fc_free 0.924
_refine.details 'Hydrogens have been added in their riding positions'
_refine.diff_density_max ?
_refine.diff_density_max_esd ?
_refine.diff_density_min ?
_refine.diff_density_min_esd ?
_refine.diff_density_rms ?
_refine.diff_density_rms_esd ?
_refine.entry_id 7K3X
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.ls_abs_structure_details ?
_refine.ls_abs_structure_Flack ?
_refine.ls_abs_structure_Flack_esd ?
_refine.ls_abs_structure_Rogers ?
_refine.ls_abs_structure_Rogers_esd ?
_refine.ls_d_res_high 1.705
_refine.ls_d_res_low 23.086
_refine.ls_extinction_coef ?
_refine.ls_extinction_coef_esd ?
_refine.ls_extinction_expression ?
_refine.ls_extinction_method ?
_refine.ls_goodness_of_fit_all ?
_refine.ls_goodness_of_fit_all_esd ?
_refine.ls_goodness_of_fit_obs ?
_refine.ls_goodness_of_fit_obs_esd ?
_refine.ls_hydrogen_treatment ?
_refine.ls_matrix_type ?
_refine.ls_number_constraints ?
_refine.ls_number_parameters ?
_refine.ls_number_reflns_all ?
_refine.ls_number_reflns_obs 448
_refine.ls_number_reflns_R_free 45
_refine.ls_number_reflns_R_work 403
_refine.ls_number_restraints ?
_refine.ls_percent_reflns_obs 95.117
_refine.ls_percent_reflns_R_free 10.045
_refine.ls_R_factor_all 0.247
_refine.ls_R_factor_obs ?
_refine.ls_R_factor_R_free 0.2481
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_R_factor_R_work 0.2468
_refine.ls_R_Fsqd_factor_obs ?
_refine.ls_R_I_factor_obs ?
_refine.ls_redundancy_reflns_all ?
_refine.ls_redundancy_reflns_obs ?
_refine.ls_restrained_S_all ?
_refine.ls_restrained_S_obs ?
_refine.ls_shift_over_esd_max ?
_refine.ls_shift_over_esd_mean ?
_refine.ls_structure_factor_coef ?
_refine.ls_weighting_details ?
_refine.ls_weighting_scheme ?
_refine.ls_wR_factor_all ?
_refine.ls_wR_factor_obs ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.occupancy_max ?
_refine.occupancy_min ?
_refine.solvent_model_details 'MASK BULK SOLVENT'
_refine.solvent_model_param_bsol ?
_refine.solvent_model_param_ksol ?
_refine.pdbx_R_complete ?
_refine.ls_R_factor_gt ?
_refine.ls_goodness_of_fit_gt ?
_refine.ls_goodness_of_fit_ref ?
_refine.ls_shift_over_su_max ?
_refine.ls_shift_over_su_max_lt ?
_refine.ls_shift_over_su_mean ?
_refine.ls_shift_over_su_mean_lt ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F ?
_refine.pdbx_ls_sigma_Fsqd ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_ls_cross_valid_method 'FREE R-VALUE'
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_starting_model 'ideal beta strand'
_refine.pdbx_stereochemistry_target_values ?
_refine.pdbx_R_Free_selection_details ?
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_overall_ESU_R 0.045
_refine.pdbx_overall_ESU_R_Free 0.032
_refine.pdbx_solvent_vdw_probe_radii 1.200
_refine.pdbx_solvent_ion_probe_radii 0.800
_refine.pdbx_solvent_shrinkage_radii 0.800
_refine.pdbx_real_space_R ?
_refine.pdbx_density_correlation ?
_refine.pdbx_pd_number_of_powder_patterns ?
_refine.pdbx_pd_number_of_points ?
_refine.pdbx_pd_meas_number_of_points ?
_refine.pdbx_pd_proc_ls_prof_R_factor ?
_refine.pdbx_pd_proc_ls_prof_wR_factor ?
_refine.pdbx_pd_Marquardt_correlation_coeff ?
_refine.pdbx_pd_Fsqrd_R_factor ?
_refine.pdbx_pd_ls_matrix_band_width ?
_refine.pdbx_overall_phase_error ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_diffrn_id 1
_refine.overall_SU_B 4.917
_refine.overall_SU_ML 0.136
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_average_fsc_overall ?
_refine.pdbx_average_fsc_work ?
_refine.pdbx_average_fsc_free ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 44
_refine_hist.pdbx_number_atoms_nucleic_acid 0
_refine_hist.pdbx_number_atoms_ligand 4
_refine_hist.number_atoms_solvent 1
_refine_hist.number_atoms_total 49
_refine_hist.d_res_high 1.705
_refine_hist.d_res_low 23.086
#
loop_
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.criterion
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.number
_refine_ls_restr.rejects
_refine_ls_restr.type
_refine_ls_restr.weight
_refine_ls_restr.pdbx_restraint_function
'X-RAY DIFFRACTION' ? 0.011 0.014 46 ? r_bond_refined_d ? ?
'X-RAY DIFFRACTION' ? 0.061 0.018 50 ? r_bond_other_d ? ?
'X-RAY DIFFRACTION' ? 1.908 1.731 59 ? r_angle_refined_deg ? ?
'X-RAY DIFFRACTION' ? 1.593 1.646 114 ? r_angle_other_deg ? ?
'X-RAY DIFFRACTION' ? 9.503 5.000 6 ? r_dihedral_angle_1_deg ? ?
'X-RAY DIFFRACTION' ? 17.662 15.000 8 ? r_dihedral_angle_3_deg ? ?
'X-RAY DIFFRACTION' ? 0.070 0.200 7 ? r_chiral_restr ? ?
'X-RAY DIFFRACTION' ? 0.005 0.020 50 ? r_gen_planes_refined ? ?
'X-RAY DIFFRACTION' ? 0.000 0.020 6 ? r_gen_planes_other ? ?
'X-RAY DIFFRACTION' ? 0.083 0.200 1 ? r_nbd_refined ? ?
'X-RAY DIFFRACTION' ? 0.203 0.200 25 ? r_symmetry_nbd_other ? ?
'X-RAY DIFFRACTION' ? 0.137 0.200 18 ? r_nbtor_refined ? ?
'X-RAY DIFFRACTION' ? 0.077 0.200 28 ? r_symmetry_nbtor_other ? ?
'X-RAY DIFFRACTION' ? 0.243 0.200 1 ? r_xyhbond_nbd_refined ? ?
'X-RAY DIFFRACTION' ? 0.237 0.200 7 ? r_symmetry_nbd_refined ? ?
'X-RAY DIFFRACTION' ? 0.332 0.200 20 ? r_nbd_other ? ?
'X-RAY DIFFRACTION' ? 4.788 2.020 27 ? r_mcbond_it ? ?
'X-RAY DIFFRACTION' ? 4.858 1.984 26 ? r_mcbond_other ? ?
'X-RAY DIFFRACTION' ? 8.142 3.003 28 ? r_mcangle_it ? ?
'X-RAY DIFFRACTION' ? 8.003 3.061 29 ? r_mcangle_other ? ?
'X-RAY DIFFRACTION' ? 12.934 2.833 19 ? r_scbond_it ? ?
'X-RAY DIFFRACTION' ? 12.609 2.774 20 ? r_scbond_other ? ?
'X-RAY DIFFRACTION' ? 14.861 4.130 26 ? r_scangle_it ? ?
'X-RAY DIFFRACTION' ? 14.583 4.050 27 ? r_scangle_other ? ?
'X-RAY DIFFRACTION' ? 18.747 28.484 33 ? r_lrange_it ? ?
'X-RAY DIFFRACTION' ? 18.717 29.582 34 ? r_lrange_other ? ?
#
loop_
_refine_ls_shell.pdbx_refine_id
_refine_ls_shell.d_res_high
_refine_ls_shell.d_res_low
_refine_ls_shell.number_reflns_all
_refine_ls_shell.number_reflns_obs
_refine_ls_shell.number_reflns_R_free
_refine_ls_shell.number_reflns_R_work
_refine_ls_shell.percent_reflns_obs
_refine_ls_shell.percent_reflns_R_free
_refine_ls_shell.R_factor_all
_refine_ls_shell.R_factor_obs
_refine_ls_shell.R_factor_R_free
_refine_ls_shell.R_factor_R_free_error
_refine_ls_shell.R_factor_R_work
_refine_ls_shell.redundancy_reflns_all
_refine_ls_shell.redundancy_reflns_obs
_refine_ls_shell.wR_factor_all
_refine_ls_shell.wR_factor_obs
_refine_ls_shell.wR_factor_R_free
_refine_ls_shell.wR_factor_R_work
_refine_ls_shell.pdbx_R_complete
_refine_ls_shell.pdbx_total_number_of_bins_used
_refine_ls_shell.pdbx_phase_error
_refine_ls_shell.pdbx_fsc_work
_refine_ls_shell.pdbx_fsc_free
'X-RAY DIFFRACTION' 1.705 1.749 . . . 25 75.7576 . . . . . 0.374 . . . . . . . . . . .
'X-RAY DIFFRACTION' 1.749 1.797 . . 3 24 100.0000 . . . 0.625 . 0.342 . . . . . . . . . . .
'X-RAY DIFFRACTION' 1.797 1.849 . . 2 26 100.0000 . . . 0.143 . 0.425 . . . . . . . . . . .
'X-RAY DIFFRACTION' 1.849 1.905 . . 1 24 100.0000 . . . 0.005 . 0.344 . . . . . . . . . . .
'X-RAY DIFFRACTION' 1.905 1.967 . . 3 32 94.5946 . . . 0.172 . 0.235 . . . . . . . . . . .
'X-RAY DIFFRACTION' 1.967 2.036 . . 6 27 80.4878 . . . 0.376 . 0.335 . . . . . . . . . . .
'X-RAY DIFFRACTION' 2.036 2.112 . . 2 27 100.0000 . . . 0.195 . 0.160 . . . . . . . . . . .
'X-RAY DIFFRACTION' 2.112 2.198 . . 2 26 100.0000 . . . 0.094 . 0.247 . . . . . . . . . . .
'X-RAY DIFFRACTION' 2.198 2.295 . . 3 22 100.0000 . . . 0.446 . 0.230 . . . . . . . . . . .
'X-RAY DIFFRACTION' 2.295 2.405 . . 4 31 100.0000 . . . 0.633 . 0.336 . . . . . . . . . . .
'X-RAY DIFFRACTION' 2.405 2.534 . . 7 18 96.1538 . . . 0.415 . 0.216 . . . . . . . . . . .
'X-RAY DIFFRACTION' 2.534 2.686 . . 0 13 92.8571 . . . . . 0.358 . . . . . . . . . . .
'X-RAY DIFFRACTION' 2.686 2.868 . . 0 15 93.7500 . . . . . 0.301 . . . . . . . . . . .
'X-RAY DIFFRACTION' 2.868 3.094 . . 2 23 100.0000 . . . 0.063 . 0.273 . . . . . . . . . . .
'X-RAY DIFFRACTION' 3.094 3.383 . . 1 17 100.0000 . . . 0.751 . 0.245 . . . . . . . . . . .
'X-RAY DIFFRACTION' 3.383 3.773 . . 4 11 100.0000 . . . 0.130 . 0.141 . . . . . . . . . . .
'X-RAY DIFFRACTION' 3.773 4.337 . . 2 17 95.0000 . . . 0.219 . 0.151 . . . . . . . . . . .
'X-RAY DIFFRACTION' 4.337 5.265 . . 2 15 100.0000 . . . 0.185 . 0.117 . . . . . . . . . . .
'X-RAY DIFFRACTION' 5.265 7.260 . . 0 4 100.0000 . . . . . 0.395 . . . . . . . . . . .
'X-RAY DIFFRACTION' 7.260 23.086 . . 1 6 87.5000 . . . 0.069 . 0.281 . . . . . . . . . . .
#
_struct.entry_id 7K3X
_struct.title 'SGMGCIT segment 58-64 from Keratin-8 with G62C mutation'
_struct.pdbx_model_details ?
_struct.pdbx_formula_weight ?
_struct.pdbx_formula_weight_method ?
_struct.pdbx_model_type_details ?
_struct.pdbx_CASP_flag N
#
_struct_keywords.entry_id 7K3X
_struct_keywords.text 'amyloid filament, low complexity sequence, cryptogenic liver disease, PROTEIN FIBRIL'
_struct_keywords.pdbx_keywords 'PROTEIN FIBRIL'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 3 ?
#
_struct_ref.id 1
_struct_ref.db_name PDB
_struct_ref.db_code 7K3X
_struct_ref.pdbx_db_accession 7K3X
_struct_ref.pdbx_db_isoform ?
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_align_begin 1
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 7K3X
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 7
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession 7K3X
_struct_ref_seq.db_align_beg 58
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 64
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 58
_struct_ref_seq.pdbx_auth_seq_align_end 64
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details decameric
_pdbx_struct_assembly.oligomeric_count 10
#
loop_
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
_pdbx_struct_assembly_gen.asym_id_list
1 1 A,B,C
1 2 A,B,C
1 3 A,B,C
1 4 A,B,C
1 5 A,B,C
1 6 A,B,C
1 7 A,B,C
1 8 A,B,C
1 9 A,B,C
1 10 A,B,C
#
_pdbx_struct_assembly_auth_evidence.id 1
_pdbx_struct_assembly_auth_evidence.assembly_id 1
_pdbx_struct_assembly_auth_evidence.experimental_support none
_pdbx_struct_assembly_auth_evidence.details ?
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 1_455 x-1,y,z 1.0000000000 0.0000000000 0.0000000000 -4.7400000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
3 'crystal symmetry operation' 1_655 x+1,y,z 1.0000000000 0.0000000000 0.0000000000 4.7400000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
4 'crystal symmetry operation' 1_355 x-2,y,z 1.0000000000 0.0000000000 0.0000000000 -9.4800000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
5 'crystal symmetry operation' 1_755 x+2,y,z 1.0000000000 0.0000000000 0.0000000000 9.4800000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
6 'crystal symmetry operation' 1_556 x,y,z+1 1.0000000000 0.0000000000 0.0000000000 -2.3816771651 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 10.0516920905
7 'crystal symmetry operation' 1_456 x-1,y,z+1 1.0000000000 0.0000000000 0.0000000000 -7.1216771651 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 10.0516920905
8 'crystal symmetry operation' 1_656 x+1,y,z+1 1.0000000000 0.0000000000 0.0000000000 2.3583228349 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 10.0516920905
9 'crystal symmetry operation' 1_356 x-2,y,z+1 1.0000000000 0.0000000000 0.0000000000 -11.8616771651 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 10.0516920905
10 'crystal symmetry operation' 1_756 x+2,y,z+1 1.0000000000 0.0000000000 0.0000000000 7.0983228349 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 10.0516920905
#
_pdbx_phasing_MR.entry_id 7K3X
_pdbx_phasing_MR.method_rotation ?
_pdbx_phasing_MR.method_translation ?
_pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO'
_pdbx_phasing_MR.R_factor ?
_pdbx_phasing_MR.R_rigid_body ?
_pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ?
_pdbx_phasing_MR.correlation_coeff_Io_to_Ic ?
_pdbx_phasing_MR.d_res_high_rotation 1.710
_pdbx_phasing_MR.d_res_low_rotation 23.090
_pdbx_phasing_MR.d_res_high_translation 1.710
_pdbx_phasing_MR.d_res_low_translation 23.090
_pdbx_phasing_MR.packing ?
_pdbx_phasing_MR.reflns_percent_rotation ?
_pdbx_phasing_MR.reflns_percent_translation ?
_pdbx_phasing_MR.sigma_F_rotation ?
_pdbx_phasing_MR.sigma_F_translation ?
_pdbx_phasing_MR.sigma_I_rotation ?
_pdbx_phasing_MR.sigma_I_translation ?
#
_phasing.method MR
#
_pdbx_entry_details.entry_id 7K3X
_pdbx_entry_details.has_ligand_of_interest N
_pdbx_entry_details.compound_details ?
_pdbx_entry_details.source_details ?
_pdbx_entry_details.nonpolymer_details ?
_pdbx_entry_details.sequence_details ?
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
CYS N N N N 1
CYS CA C N R 2
CYS C C N N 3
CYS O O N N 4
CYS CB C N N 5
CYS SG S N N 6
CYS OXT O N N 7
CYS H H N N 8
CYS H2 H N N 9
CYS HA H N N 10
CYS HB2 H N N 11
CYS HB3 H N N 12
CYS HG H N N 13
CYS HXT H N N 14
GLY N N N N 15
GLY CA C N N 16
GLY C C N N 17
GLY O O N N 18
GLY OXT O N N 19
GLY H H N N 20
GLY H2 H N N 21
GLY HA2 H N N 22
GLY HA3 H N N 23
GLY HXT H N N 24
HOH O O N N 25
HOH H1 H N N 26
HOH H2 H N N 27
ILE N N N N 28
ILE CA C N S 29
ILE C C N N 30
ILE O O N N 31
ILE CB C N S 32
ILE CG1 C N N 33
ILE CG2 C N N 34
ILE CD1 C N N 35
ILE OXT O N N 36
ILE H H N N 37
ILE H2 H N N 38
ILE HA H N N 39
ILE HB H N N 40
ILE HG12 H N N 41
ILE HG13 H N N 42
ILE HG21 H N N 43
ILE HG22 H N N 44
ILE HG23 H N N 45
ILE HD11 H N N 46
ILE HD12 H N N 47
ILE HD13 H N N 48
ILE HXT H N N 49
IPA C1 C N N 50
IPA C2 C N N 51
IPA C3 C N N 52
IPA O2 O N N 53
IPA H11 H N N 54
IPA H12 H N N 55
IPA H13 H N N 56
IPA H2 H N N 57
IPA H31 H N N 58
IPA H32 H N N 59
IPA H33 H N N 60
IPA HO2 H N N 61
MET N N N N 62
MET CA C N S 63
MET C C N N 64
MET O O N N 65
MET CB C N N 66
MET CG C N N 67
MET SD S N N 68
MET CE C N N 69
MET OXT O N N 70
MET H H N N 71
MET H2 H N N 72
MET HA H N N 73
MET HB2 H N N 74
MET HB3 H N N 75
MET HG2 H N N 76
MET HG3 H N N 77
MET HE1 H N N 78
MET HE2 H N N 79
MET HE3 H N N 80
MET HXT H N N 81
SER N N N N 82
SER CA C N S 83
SER C C N N 84
SER O O N N 85
SER CB C N N 86
SER OG O N N 87
SER OXT O N N 88
SER H H N N 89
SER H2 H N N 90
SER HA H N N 91
SER HB2 H N N 92
SER HB3 H N N 93
SER HG H N N 94
SER HXT H N N 95
THR N N N N 96
THR CA C N S 97
THR C C N N 98
THR O O N N 99
THR CB C N R 100
THR OG1 O N N 101
THR CG2 C N N 102
THR OXT O N N 103
THR H H N N 104
THR H2 H N N 105
THR HA H N N 106
THR HB H N N 107
THR HG1 H N N 108
THR HG21 H N N 109
THR HG22 H N N 110
THR HG23 H N N 111
THR HXT H N N 112
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
CYS N CA sing N N 1
CYS N H sing N N 2
CYS N H2 sing N N 3
CYS CA C sing N N 4
CYS CA CB sing N N 5
CYS CA HA sing N N 6
CYS C O doub N N 7
CYS C OXT sing N N 8
CYS CB SG sing N N 9
CYS CB HB2 sing N N 10
CYS CB HB3 sing N N 11
CYS SG HG sing N N 12
CYS OXT HXT sing N N 13
GLY N CA sing N N 14
GLY N H sing N N 15
GLY N H2 sing N N 16
GLY CA C sing N N 17
GLY CA HA2 sing N N 18
GLY CA HA3 sing N N 19
GLY C O doub N N 20
GLY C OXT sing N N 21
GLY OXT HXT sing N N 22
HOH O H1 sing N N 23
HOH O H2 sing N N 24
ILE N CA sing N N 25
ILE N H sing N N 26
ILE N H2 sing N N 27
ILE CA C sing N N 28
ILE CA CB sing N N 29
ILE CA HA sing N N 30
ILE C O doub N N 31
ILE C OXT sing N N 32
ILE CB CG1 sing N N 33
ILE CB CG2 sing N N 34
ILE CB HB sing N N 35
ILE CG1 CD1 sing N N 36
ILE CG1 HG12 sing N N 37
ILE CG1 HG13 sing N N 38
ILE CG2 HG21 sing N N 39
ILE CG2 HG22 sing N N 40
ILE CG2 HG23 sing N N 41
ILE CD1 HD11 sing N N 42
ILE CD1 HD12 sing N N 43
ILE CD1 HD13 sing N N 44
ILE OXT HXT sing N N 45
IPA C1 C2 sing N N 46
IPA C1 H11 sing N N 47
IPA C1 H12 sing N N 48
IPA C1 H13 sing N N 49
IPA C2 C3 sing N N 50
IPA C2 O2 sing N N 51
IPA C2 H2 sing N N 52
IPA C3 H31 sing N N 53
IPA C3 H32 sing N N 54
IPA C3 H33 sing N N 55
IPA O2 HO2 sing N N 56
MET N CA sing N N 57
MET N H sing N N 58
MET N H2 sing N N 59
MET CA C sing N N 60
MET CA CB sing N N 61
MET CA HA sing N N 62
MET C O doub N N 63
MET C OXT sing N N 64
MET CB CG sing N N 65
MET CB HB2 sing N N 66
MET CB HB3 sing N N 67
MET CG SD sing N N 68
MET CG HG2 sing N N 69
MET CG HG3 sing N N 70
MET SD CE sing N N 71
MET CE HE1 sing N N 72
MET CE HE2 sing N N 73
MET CE HE3 sing N N 74
MET OXT HXT sing N N 75
SER N CA sing N N 76
SER N H sing N N 77
SER N H2 sing N N 78
SER CA C sing N N 79
SER CA CB sing N N 80
SER CA HA sing N N 81
SER C O doub N N 82
SER C OXT sing N N 83
SER CB OG sing N N 84
SER CB HB2 sing N N 85
SER CB HB3 sing N N 86
SER OG HG sing N N 87
SER OXT HXT sing N N 88
THR N CA sing N N 89
THR N H sing N N 90
THR N H2 sing N N 91
THR CA C sing N N 92
THR CA CB sing N N 93
THR CA HA sing N N 94
THR C O doub N N 95
THR C OXT sing N N 96
THR CB OG1 sing N N 97
THR CB CG2 sing N N 98
THR CB HB sing N N 99
THR OG1 HG1 sing N N 100
THR CG2 HG21 sing N N 101
THR CG2 HG22 sing N N 102
THR CG2 HG23 sing N N 103
THR OXT HXT sing N N 104
#
_pdbx_audit_support.funding_organization
'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)'
_pdbx_audit_support.country 'United States'
_pdbx_audit_support.grant_number 'P30 GM124165'
_pdbx_audit_support.ordinal 1
#
_pdbx_initial_refinement_model.accession_code ?
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'in silico model'
_pdbx_initial_refinement_model.source_name Other
_pdbx_initial_refinement_model.details 'ideal beta strand'
#
loop_
_pdbx_reflns_twin.domain_id
_pdbx_reflns_twin.operator
_pdbx_reflns_twin.fraction
_pdbx_reflns_twin.type
_pdbx_reflns_twin.crystal_id
_pdbx_reflns_twin.diffrn_id
1 'H, K, L' 0.5277 pseudo-merohedral 1 1
2 '-H, -K, H+L' 0.4723 pseudo-merohedral 2 2
#
_atom_sites.entry_id 7K3X
_atom_sites.Cartn_transf_matrix[1][1] ?
_atom_sites.Cartn_transf_matrix[1][2] ?
_atom_sites.Cartn_transf_matrix[1][3] ?
_atom_sites.Cartn_transf_matrix[2][1] ?
_atom_sites.Cartn_transf_matrix[2][2] ?
_atom_sites.Cartn_transf_matrix[2][3] ?
_atom_sites.Cartn_transf_matrix[3][1] ?
_atom_sites.Cartn_transf_matrix[3][2] ?
_atom_sites.Cartn_transf_matrix[3][3] ?
_atom_sites.Cartn_transf_vector[1] ?
_atom_sites.Cartn_transf_vector[2] ?
_atom_sites.Cartn_transf_vector[3] ?
_atom_sites.fract_transf_matrix[1][1] 0.210970
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.049988
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.021659
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.099486
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
_atom_sites.solution_primary ?
_atom_sites.solution_secondary ?
_atom_sites.solution_hydrogens ?
_atom_sites.special_details ?
#
loop_
_atom_type.symbol
_atom_type.pdbx_scat_Z
_atom_type.pdbx_N_electrons
_atom_type.scat_Cromer_Mann_a1
_atom_type.scat_Cromer_Mann_b1
_atom_type.scat_Cromer_Mann_a2
_atom_type.scat_Cromer_Mann_b2
_atom_type.scat_Cromer_Mann_a3
_atom_type.scat_Cromer_Mann_b3
_atom_type.scat_Cromer_Mann_a4
_atom_type.scat_Cromer_Mann_b4
_atom_type.scat_Cromer_Mann_c
C 6 6 2.310 20.844 1.020 10.208 1.589 0.569 0.865 51.651 0.216
H 1 1 0.493 10.511 0.323 26.126 0.140 3.142 0.041 57.800 0.003
N 7 7 12.222 0.006 3.135 9.893 2.014 28.997 1.167 0.583 -11.538
O 8 8 3.049 13.277 2.287 5.701 1.546 0.324 0.867 32.909 0.251
S 16 16 6.905 1.468 5.203 22.215 1.438 0.254 1.586 56.172 0.867
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 N N . SER A 1 1 ? -1.708 9.261 -5.821 1.000 51.845 0 58 SER A N 1
ATOM 2 C CA . SER A 1 1 ? -1.721 8.053 -6.680 1.000 43.035 0 58 SER A CA 1
ATOM 3 C C . SER A 1 1 ? -0.948 6.940 -5.969 1.000 35.530 0 58 SER A C 1
ATOM 4 O O . SER A 1 1 ? 0.124 6.513 -6.483 1.000 38.522 0 58 SER A O 1
ATOM 5 C CB . SER A 1 1 ? -1.188 8.373 -8.054 1.000 45.126 0 58 SER A CB 1
ATOM 6 O OG . SER A 1 1 ? -2.131 9.156 -8.779 1.000 48.025 0 58 SER A OG 1
ATOM 7 N N . GLY A 1 2 ? -1.485 6.511 -4.820 1.000 24.742 0 59 GLY A N 1
ATOM 8 C CA . GLY A 1 2 ? -0.844 5.565 -3.891 1.000 19.871 0 59 GLY A CA 1
ATOM 9 C C . GLY A 1 2 ? -1.625 4.269 -3.751 1.000 17.639 0 59 GLY A C 1
ATOM 10 O O . GLY A 1 2 ? -2.869 4.291 -3.868 1.000 13.920 0 59 GLY A O 1
ATOM 11 N N . MET A 1 3 ? -0.939 3.153 -3.484 1.000 18.301 0 60 MET A N 1
ATOM 12 C CA . MET A 1 3 ? -1.623 1.879 -3.125 1.000 16.108 0 60 MET A CA 1
ATOM 13 C C . MET A 1 3 ? -0.826 1.113 -2.085 1.000 12.510 0 60 MET A C 1
ATOM 14 O O . MET A 1 3 ? 0.440 1.055 -2.149 1.000 12.439 0 60 MET A O 1
ATOM 15 C CB . MET A 1 3 ? -1.871 0.975 -4.334 1.000 20.040 0 60 MET A CB 1
ATOM 16 C CG . MET A 1 3 ? -0.896 1.156 -5.429 1.000 20.465 0 60 MET A CG 1
ATOM 17 S SD . MET A 1 3 ? -1.458 0.153 -6.792 1.000 34.850 0 60 MET A SD 1
ATOM 18 C CE . MET A 1 3 ? -0.503 -1.320 -6.465 1.000 27.429 0 60 MET A CE 1
ATOM 19 N N . GLY A 1 4 ? -1.570 0.572 -1.134 1.000 12.601 0 61 GLY A N 1
ATOM 20 C CA . GLY A 1 4 ? -1.010 -0.146 0.024 1.000 12.960 0 61 GLY A CA 1
ATOM 21 C C . GLY A 1 4 ? -1.654 -1.496 0.214 1.000 8.888 0 61 GLY A C 1
ATOM 22 O O . GLY A 1 4 ? -2.903 -1.576 0.188 1.000 7.438 0 61 GLY A O 1
ATOM 23 N N . CYS A 1 5 ? -0.843 -2.519 0.434 1.000 13.148 0 62 CYS A N 1
ATOM 24 C CA . CYS A 1 5 ? -1.306 -3.898 0.749 1.000 20.753 0 62 CYS A CA 1
ATOM 25 C C . CYS A 1 5 ? -0.632 -4.404 2.022 1.000 15.301 0 62 CYS A C 1
ATOM 26 O O . CYS A 1 5 ? 0.623 -4.541 2.060 1.000 13.129 0 62 CYS A O 1
ATOM 27 C CB . CYS A 1 5 ? -1.017 -4.871 -0.389 1.000 24.190 0 62 CYS A CB 1
ATOM 28 S SG . CYS A 1 5 ? -1.683 -6.525 -0.061 1.000 60.838 0 62 CYS A SG 1
ATOM 29 N N . ILE A 1 6 ? -1.433 -4.677 3.036 1.000 14.740 0 63 ILE A N 1
ATOM 30 C CA . ILE A 1 6 ? -0.941 -5.384 4.247 1.000 15.923 0 63 ILE A CA 1
ATOM 31 C C . ILE A 1 6 ? -1.467 -6.822 4.158 1.000 15.595 0 63 ILE A C 1
ATOM 32 O O . ILE A 1 6 ? -2.674 -7.035 4.359 1.000 17.976 0 63 ILE A O 1
ATOM 33 C CB . ILE A 1 6 ? -1.341 -4.609 5.517 1.000 15.257 0 63 ILE A CB 1
ATOM 34 C CG1 . ILE A 1 6 ? -0.723 -3.204 5.554 1.000 19.312 0 63 ILE A CG1 1
ATOM 35 C CG2 . ILE A 1 6 ? -0.962 -5.399 6.753 1.000 20.714 0 63 ILE A CG2 1
ATOM 36 C CD1 . ILE A 1 6 ? -1.070 -2.389 6.790 1.000 19.569 0 63 ILE A CD1 1
ATOM 37 N N . THR A 1 7 ? -0.617 -7.768 3.756 1.000 22.477 0 64 THR A N 1
ATOM 38 C CA . THR A 1 7 ? -1.042 -9.119 3.294 1.000 32.875 0 64 THR A CA 1
ATOM 39 C C . THR A 1 7 ? -0.903 -10.139 4.412 1.000 30.762 0 64 THR A C 1
ATOM 40 O O . THR A 1 7 ? 0.179 -10.684 4.531 1.000 29.267 0 64 THR A O 1
ATOM 41 C CB . THR A 1 7 ? -0.212 -9.614 2.111 1.000 42.802 0 64 THR A CB 1
ATOM 42 O OG1 . THR A 1 7 ? -0.242 -8.583 1.122 1.000 73.724 0 64 THR A OG1 1
ATOM 43 C CG2 . THR A 1 7 ? -0.740 -10.913 1.540 1.000 51.289 0 64 THR A CG2 1
ATOM 44 O OXT . THR A 1 7 ? -1.841 -10.409 5.149 1.000 49.341 0 64 THR A OXT 1
HETATM 45 C C1 . IPA B 2 . ? 0.578 3.659 -9.746 0.500 13.466 0 101 IPA A C1 1
HETATM 46 C C2 . IPA B 2 . ? 1.889 3.094 -9.313 0.500 13.303 0 101 IPA A C2 1
HETATM 47 C C3 . IPA B 2 . ? 3.119 3.687 -9.918 0.500 13.023 0 101 IPA A C3 1
HETATM 48 O O2 . IPA B 2 . ? 1.965 3.174 -7.894 0.500 17.086 0 101 IPA A O2 1
HETATM 49 O O . HOH C 3 . ? 0.013 10.491 -10.165 1.000 28.181 0 201 HOH A O 1
#