data_6RHD
#
_entry.id 6RHD
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.392
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 6RHD pdb_00006rhd 10.2210/pdb6rhd/pdb
WWPDB D_1292101961 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2020-03-25
2 'Structure model' 1 1 2024-05-15
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Data collection'
2 2 'Structure model' 'Database references'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 2 'Structure model' chem_comp_atom
2 2 'Structure model' chem_comp_bond
3 2 'Structure model' database_2
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 2 'Structure model' '_database_2.pdbx_DOI'
2 2 'Structure model' '_database_2.pdbx_database_accession'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.entry_id 6RHD
_pdbx_database_status.recvd_initial_deposition_date 2019-04-19
_pdbx_database_status.SG_entry N
_pdbx_database_status.deposit_site PDBE
_pdbx_database_status.process_site PDBE
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_nmr_data ?
#
loop_
_pdbx_database_related.db_name
_pdbx_database_related.details
_pdbx_database_related.db_id
_pdbx_database_related.content_type
PDB . 6RHA unspecified
PDB . 6RHB unspecified
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
_audit_author.identifier_ORCID
'Landau, M.' 1 0000-0002-1743-3430
'Perov, S.' 2 ?
#
_citation.abstract ?
_citation.abstract_id_CAS ?
_citation.book_id_ISBN ?
_citation.book_publisher ?
_citation.book_publisher_city ?
_citation.book_title ?
_citation.coordinate_linkage ?
_citation.country ?
_citation.database_id_Medline ?
_citation.details ?
_citation.id primary
_citation.journal_abbrev 'To be published'
_citation.journal_id_ASTM ?
_citation.journal_id_CSD 0353
_citation.journal_id_ISSN ?
_citation.journal_full ?
_citation.journal_issue ?
_citation.journal_volume ?
_citation.language ?
_citation.page_first ?
_citation.page_last ?
_citation.title
'Amyloid structures from a Candida albicans adhesin Structure and conservation of amyloid spines from fungal adhesins'
_citation.year ?
_citation.database_id_CSD ?
_citation.pdbx_database_id_DOI ?
_citation.pdbx_database_id_PubMed ?
_citation.unpublished_flag ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Perov, S.' 1 ?
primary 'Landau, M.' 2 ?
primary 'Lipke, P.N.' 3 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn 'Agglutinin-like protein 5' 624.684 1 ? ?
'Amyloid spine segment TSYVGV from Als5 (residues 369-373) secreted by Candida albicans' ?
2 water nat water 18.015 7 ? ? ? ?
#
_entity_name_com.entity_id 1
_entity_name_com.name 'Adhesin 5'
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code TSYVGV
_entity_poly.pdbx_seq_one_letter_code_can TSYVGV
_entity_poly.pdbx_strand_id B
_entity_poly.pdbx_target_identifier ?
#
_pdbx_entity_nonpoly.entity_id 2
_pdbx_entity_nonpoly.name water
_pdbx_entity_nonpoly.comp_id HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 THR n
1 2 SER n
1 3 TYR n
1 4 VAL n
1 5 GLY n
1 6 VAL n
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num 1
_pdbx_entity_src_syn.pdbx_end_seq_num 6
_pdbx_entity_src_syn.organism_scientific 'Candida albicans'
_pdbx_entity_src_syn.organism_common_name Yeast
_pdbx_entity_src_syn.ncbi_taxonomy_id 5476
_pdbx_entity_src_syn.details 'TSYVGV from Als5, synthesized'
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067
HOH non-polymer . WATER ? 'H2 O' 18.015
SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093
THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119
TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189
VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 THR 1 1 1 THR THR B . n
A 1 2 SER 2 2 2 SER SER B . n
A 1 3 TYR 3 3 3 TYR TYR B . n
A 1 4 VAL 4 4 4 VAL VAL B . n
A 1 5 GLY 5 5 5 GLY GLY B . n
A 1 6 VAL 6 6 6 VAL VAL B . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HOH 1 101 2 HOH HOH B .
B 2 HOH 2 102 3 HOH HOH B .
B 2 HOH 3 103 4 HOH HOH B .
B 2 HOH 4 104 1 HOH HOH B .
B 2 HOH 5 105 6 HOH HOH B .
B 2 HOH 6 106 5 HOH HOH B .
B 2 HOH 7 107 7 HOH HOH B .
#
loop_
_software.citation_id
_software.classification
_software.compiler_name
_software.compiler_version
_software.contact_author
_software.contact_author_email
_software.date
_software.description
_software.dependencies
_software.hardware
_software.language
_software.location
_software.mods
_software.name
_software.os
_software.os_version
_software.type
_software.version
_software.pdbx_ordinal
? 'data reduction' ? ? 'Wolfgang Kabsch' Wolfgang.Kabsch@mpimf-heidelberg.mpg.de ? ? ? ? ?
http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/ ? XDS ? ? package . 1
? 'data scaling' ? ? 'Wolfgang Kabsch' ? ? ? ? ? ?
http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? XSCALE ? ? package . 2
? phasing ? ? 'Randy J. Read' cimr-phaser@lists.cam.ac.uk ? ? ? ? ?
http://www-structmed.cimr.cam.ac.uk/phaser/ ? PHASER ? ? program . 3
? refinement ? ? 'Garib N. Murshudov' garib@ysbl.york.ac.uk ? ? ? ? Fortran_77
http://www.ccp4.ac.uk/dist/html/refmac5.html ? REFMAC ? ? program 5.7.0029 4
? 'data extraction' ? ? PDB deposit@deposit.rcsb.org 'Apr. 1, 2019' ? ? ? C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/ ? PDB_EXTRACT ? ? package 3.25 5
#
_cell.angle_alpha 90.000
_cell.angle_alpha_esd ?
_cell.angle_beta 95.080
_cell.angle_beta_esd ?
_cell.angle_gamma 90.000
_cell.angle_gamma_esd ?
_cell.entry_id 6RHD
_cell.details ?
_cell.formula_units_Z ?
_cell.length_a 11.770
_cell.length_a_esd ?
_cell.length_b 9.360
_cell.length_b_esd ?
_cell.length_c 16.790
_cell.length_c_esd ?
_cell.volume ?
_cell.volume_esd ?
_cell.Z_PDB 2
_cell.reciprocal_angle_alpha ?
_cell.reciprocal_angle_beta ?
_cell.reciprocal_angle_gamma ?
_cell.reciprocal_angle_alpha_esd ?
_cell.reciprocal_angle_beta_esd ?
_cell.reciprocal_angle_gamma_esd ?
_cell.reciprocal_length_a ?
_cell.reciprocal_length_b ?
_cell.reciprocal_length_c ?
_cell.reciprocal_length_a_esd ?
_cell.reciprocal_length_b_esd ?
_cell.reciprocal_length_c_esd ?
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 6RHD
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 4
_symmetry.space_group_name_Hall ?
_symmetry.space_group_name_H-M 'P 1 21 1'
_symmetry.pdbx_full_space_group_name_H-M ?
#
_exptl.absorpt_coefficient_mu ?
_exptl.absorpt_correction_T_max ?
_exptl.absorpt_correction_T_min ?
_exptl.absorpt_correction_type ?
_exptl.absorpt_process_details ?
_exptl.entry_id 6RHD
_exptl.crystals_number 2
_exptl.details ?
_exptl.method 'X-RAY DIFFRACTION'
_exptl.method_details ?
#
_exptl_crystal.colour ?
_exptl_crystal.density_diffrn ?
_exptl_crystal.density_Matthews 1.47
_exptl_crystal.density_method ?
_exptl_crystal.density_percent_sol 16.59
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.id 1
_exptl_crystal.preparation ?
_exptl_crystal.size_max ?
_exptl_crystal.size_mid ?
_exptl_crystal.size_min ?
_exptl_crystal.size_rad ?
_exptl_crystal.colour_lustre ?
_exptl_crystal.colour_modifier ?
_exptl_crystal.colour_primary ?
_exptl_crystal.density_meas ?
_exptl_crystal.density_meas_esd ?
_exptl_crystal.density_meas_gt ?
_exptl_crystal.density_meas_lt ?
_exptl_crystal.density_meas_temp ?
_exptl_crystal.density_meas_temp_esd ?
_exptl_crystal.density_meas_temp_gt ?
_exptl_crystal.density_meas_temp_lt ?
_exptl_crystal.pdbx_crystal_image_url ?
_exptl_crystal.pdbx_crystal_image_format ?
_exptl_crystal.pdbx_mosaicity ?
_exptl_crystal.pdbx_mosaicity_esd ?
#
_exptl_crystal_grow.apparatus ?
_exptl_crystal_grow.atmosphere ?
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.details ?
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.method_ref ?
_exptl_crystal_grow.pH ?
_exptl_crystal_grow.pressure ?
_exptl_crystal_grow.pressure_esd ?
_exptl_crystal_grow.seeding ?
_exptl_crystal_grow.seeding_ref ?
_exptl_crystal_grow.temp 293
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.temp_esd ?
_exptl_crystal_grow.time ?
_exptl_crystal_grow.pdbx_details 'Reservoir contained 0.1 M Na Acet 4.6 pH, 30 %v/v MPD, 0.2 M NaCl'
_exptl_crystal_grow.pdbx_pH_range ?
#
_diffrn.ambient_environment ?
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.ambient_temp_esd ?
_diffrn.crystal_id 1
_diffrn.crystal_support ?
_diffrn.crystal_treatment ?
_diffrn.details ?
_diffrn.id 1
_diffrn.ambient_pressure ?
_diffrn.ambient_pressure_esd ?
_diffrn.ambient_pressure_gt ?
_diffrn.ambient_pressure_lt ?
_diffrn.ambient_temp_gt ?
_diffrn.ambient_temp_lt ?
_diffrn.pdbx_serial_crystal_experiment N
#
_diffrn_detector.details ?
_diffrn_detector.detector PIXEL
_diffrn_detector.diffrn_id 1
_diffrn_detector.type 'DECTRIS PILATUS3 2M'
_diffrn_detector.area_resol_mean ?
_diffrn_detector.dtime ?
_diffrn_detector.pdbx_frames_total ?
_diffrn_detector.pdbx_collection_time_total ?
_diffrn_detector.pdbx_collection_date 2015-12-11
_diffrn_detector.pdbx_frequency ?
#
_diffrn_radiation.collimation ?
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.filter_edge ?
_diffrn_radiation.inhomogeneity ?
_diffrn_radiation.monochromator ?
_diffrn_radiation.polarisn_norm ?
_diffrn_radiation.polarisn_ratio ?
_diffrn_radiation.probe ?
_diffrn_radiation.type ?
_diffrn_radiation.xray_symbol ?
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.pdbx_wavelength_list ?
_diffrn_radiation.pdbx_wavelength ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_analyzer ?
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 0.8729
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.current ?
_diffrn_source.details ?
_diffrn_source.diffrn_id 1
_diffrn_source.power ?
_diffrn_source.size ?
_diffrn_source.source SYNCHROTRON
_diffrn_source.target ?
_diffrn_source.type 'ESRF BEAMLINE ID23-2'
_diffrn_source.voltage ?
_diffrn_source.take-off_angle ?
_diffrn_source.pdbx_wavelength_list 0.8729
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_synchrotron_beamline ID23-2
_diffrn_source.pdbx_synchrotron_site ESRF
#
_reflns.B_iso_Wilson_estimate 12.481
_reflns.entry_id 6RHD
_reflns.data_reduction_details ?
_reflns.data_reduction_method ?
_reflns.d_resolution_high 1.200
_reflns.d_resolution_low 16.720
_reflns.details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.number_all ?
_reflns.number_obs 1178
_reflns.observed_criterion ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.observed_criterion_I_max ?
_reflns.observed_criterion_I_min ?
_reflns.observed_criterion_sigma_F ?
_reflns.observed_criterion_sigma_I ?
_reflns.percent_possible_obs 96.200
_reflns.R_free_details ?
_reflns.Rmerge_F_all ?
_reflns.Rmerge_F_obs ?
_reflns.Friedel_coverage ?
_reflns.number_gt ?
_reflns.threshold_expression ?
_reflns.pdbx_redundancy 27.090
_reflns.pdbx_Rmerge_I_obs 0.200
_reflns.pdbx_Rmerge_I_all ?
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_av_sigmaI ?
_reflns.pdbx_netI_over_sigmaI 13.660
_reflns.pdbx_res_netI_over_av_sigmaI_2 ?
_reflns.pdbx_res_netI_over_sigmaI_2 ?
_reflns.pdbx_chi_squared 0.943
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_d_res_high_opt ?
_reflns.pdbx_d_res_low_opt ?
_reflns.pdbx_d_res_opt_method ?
_reflns.phase_calculation_details ?
_reflns.pdbx_Rrim_I_all 0.204
_reflns.pdbx_Rpim_I_all ?
_reflns.pdbx_d_opt ?
_reflns.pdbx_number_measured_all 31912
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
_reflns.pdbx_CC_half 0.999
_reflns.pdbx_R_split ?
_reflns.pdbx_CC_star ?
#
loop_
_reflns_shell.d_res_high
_reflns_shell.d_res_low
_reflns_shell.meanI_over_sigI_all
_reflns_shell.meanI_over_sigI_obs
_reflns_shell.number_measured_all
_reflns_shell.number_measured_obs
_reflns_shell.number_possible
_reflns_shell.number_unique_all
_reflns_shell.number_unique_obs
_reflns_shell.percent_possible_all
_reflns_shell.percent_possible_obs
_reflns_shell.Rmerge_F_all
_reflns_shell.Rmerge_F_obs
_reflns_shell.Rmerge_I_all
_reflns_shell.Rmerge_I_obs
_reflns_shell.meanI_over_sigI_gt
_reflns_shell.meanI_over_uI_all
_reflns_shell.meanI_over_uI_gt
_reflns_shell.number_measured_gt
_reflns_shell.number_unique_gt
_reflns_shell.percent_possible_gt
_reflns_shell.Rmerge_F_gt
_reflns_shell.Rmerge_I_gt
_reflns_shell.pdbx_redundancy
_reflns_shell.pdbx_Rsym_value
_reflns_shell.pdbx_chi_squared
_reflns_shell.pdbx_netI_over_sigmaI_all
_reflns_shell.pdbx_netI_over_sigmaI_obs
_reflns_shell.pdbx_Rrim_I_all
_reflns_shell.pdbx_Rpim_I_all
_reflns_shell.pdbx_rejects
_reflns_shell.pdbx_ordinal
_reflns_shell.pdbx_diffrn_id
_reflns_shell.pdbx_CC_half
_reflns_shell.pdbx_R_split
_reflns_shell.pdbx_CC_star
1.200 1.250 ? 2.490 ? 1290 142 ? 139 97.900 ? ? ? ? 0.855 ? ? ? ? ? ? ? ? 9.281 ? ? ? ? 0.900 ? ? 1 1 0.842 ? ?
1.250 1.310 ? 3.130 ? 1601 152 ? 133 87.500 ? ? ? ? 0.827 ? ? ? ? ? ? ? ? 12.038 ? ? ? ? 0.864 ? ? 2 1 0.900 ? ?
1.310 1.390 ? 3.610 ? 1728 129 ? 124 96.100 ? ? ? ? 0.782 ? ? ? ? ? ? ? ? 13.935 ? ? ? ? 0.812 ? ? 3 1 0.927 ? ?
1.390 1.470 ? 6.200 ? 3233 121 ? 122 100.000 ? ? ? ? 0.621 ? ? ? ? ? ? ? ? 26.500 ? ? ? ? 0.633 ? ? 4 1 0.982 ? ?
1.470 1.570 ? 7.200 ? 3902 122 ? 109 89.300 ? ? ? ? 0.634 ? ? ? ? ? ? ? ? 35.798 ? ? ? ? 0.643 ? ? 5 1 0.972 ? ?
1.570 1.700 ? 11.180 ? 4341 114 ? 114 100.000 ? ? ? ? 0.437 ? ? ? ? ? ? ? ? 38.079 ? ? ? ? 0.443 ? ? 6 1 0.988 ? ?
1.700 1.860 ? 14.990 ? 3568 103 ? 98 95.100 ? ? ? ? 0.304 ? ? ? ? ? ? ? ? 36.408 ? ? ? ? 0.308 ? ? 7 1 0.993 ? ?
1.860 2.080 ? 22.830 ? 3432 91 ? 91 100.000 ? ? ? ? 0.200 ? ? ? ? ? ? ? ? 37.714 ? ? ? ? 0.203 ? ? 8 1 0.997 ? ?
2.080 2.400 ? 27.170 ? 3016 89 ? 87 97.800 ? ? ? ? 0.171 ? ? ? ? ? ? ? ? 34.667 ? ? ? ? 0.174 ? ? 9 1 0.997 ? ?
2.400 2.940 ? 33.720 ? 2620 69 ? 70 100.000 ? ? ? ? 0.136 ? ? ? ? ? ? ? ? 37.429 ? ? ? ? 0.138 ? ? 10 1 0.999 ? ?
2.940 4.160 ? 40.630 ? 2001 57 ? 56 98.200 ? ? ? ? 0.118 ? ? ? ? ? ? ? ? 35.732 ? ? ? ? 0.119 ? ? 11 1 0.999 ? ?
4.160 16.720 ? 43.550 ? 1180 36 ? 35 97.200 ? ? ? ? 0.104 ? ? ? ? ? ? ? ? 33.714 ? ? ? ? 0.106 ? ? 12 1 0.999 ? ?
#
_refine.aniso_B[1][1] -0.1300
_refine.aniso_B[1][2] -0.0000
_refine.aniso_B[1][3] 0.2300
_refine.aniso_B[2][2] 0.5400
_refine.aniso_B[2][3] 0.0000
_refine.aniso_B[3][3] -0.4300
_refine.B_iso_max 40.050
_refine.B_iso_mean 8.3670
_refine.B_iso_min 5.450
_refine.correlation_coeff_Fo_to_Fc 0.9900
_refine.correlation_coeff_Fo_to_Fc_free 0.9870
_refine.details
'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY'
_refine.diff_density_max ?
_refine.diff_density_max_esd ?
_refine.diff_density_min ?
_refine.diff_density_min_esd ?
_refine.diff_density_rms ?
_refine.diff_density_rms_esd ?
_refine.entry_id 6RHD
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.ls_abs_structure_details ?
_refine.ls_abs_structure_Flack ?
_refine.ls_abs_structure_Flack_esd ?
_refine.ls_abs_structure_Rogers ?
_refine.ls_abs_structure_Rogers_esd ?
_refine.ls_d_res_high 1.2000
_refine.ls_d_res_low 16.7200
_refine.ls_extinction_coef ?
_refine.ls_extinction_coef_esd ?
_refine.ls_extinction_expression ?
_refine.ls_extinction_method ?
_refine.ls_goodness_of_fit_all ?
_refine.ls_goodness_of_fit_all_esd ?
_refine.ls_goodness_of_fit_obs ?
_refine.ls_goodness_of_fit_obs_esd ?
_refine.ls_hydrogen_treatment ?
_refine.ls_matrix_type ?
_refine.ls_number_constraints ?
_refine.ls_number_parameters ?
_refine.ls_number_reflns_all ?
_refine.ls_number_reflns_obs 1059
_refine.ls_number_reflns_R_free 118
_refine.ls_number_reflns_R_work ?
_refine.ls_number_restraints ?
_refine.ls_percent_reflns_obs 96.1600
_refine.ls_percent_reflns_R_free 10.0000
_refine.ls_R_factor_all ?
_refine.ls_R_factor_obs 0.1082
_refine.ls_R_factor_R_free 0.1265
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_R_factor_R_work 0.1059
_refine.ls_R_Fsqd_factor_obs ?
_refine.ls_R_I_factor_obs ?
_refine.ls_redundancy_reflns_all ?
_refine.ls_redundancy_reflns_obs ?
_refine.ls_restrained_S_all ?
_refine.ls_restrained_S_obs ?
_refine.ls_shift_over_esd_max ?
_refine.ls_shift_over_esd_mean ?
_refine.ls_structure_factor_coef ?
_refine.ls_weighting_details ?
_refine.ls_weighting_scheme ?
_refine.ls_wR_factor_all ?
_refine.ls_wR_factor_obs ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.occupancy_max ?
_refine.occupancy_min ?
_refine.solvent_model_details ?
_refine.solvent_model_param_bsol ?
_refine.solvent_model_param_ksol ?
_refine.ls_R_factor_gt ?
_refine.ls_goodness_of_fit_gt ?
_refine.ls_goodness_of_fit_ref ?
_refine.ls_shift_over_su_max ?
_refine.ls_shift_over_su_max_lt ?
_refine.ls_shift_over_su_mean ?
_refine.ls_shift_over_su_mean_lt ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 0.000
_refine.pdbx_ls_sigma_Fsqd ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_starting_model ?
_refine.pdbx_stereochemistry_target_values ?
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_overall_ESU_R 0.0390
_refine.pdbx_overall_ESU_R_Free 0.0350
_refine.pdbx_solvent_vdw_probe_radii 1.2000
_refine.pdbx_solvent_ion_probe_radii 0.8000
_refine.pdbx_solvent_shrinkage_radii 0.8000
_refine.pdbx_real_space_R ?
_refine.pdbx_density_correlation ?
_refine.pdbx_pd_number_of_powder_patterns ?
_refine.pdbx_pd_number_of_points ?
_refine.pdbx_pd_meas_number_of_points ?
_refine.pdbx_pd_proc_ls_prof_R_factor ?
_refine.pdbx_pd_proc_ls_prof_wR_factor ?
_refine.pdbx_pd_Marquardt_correlation_coeff ?
_refine.pdbx_pd_Fsqrd_R_factor ?
_refine.pdbx_pd_ls_matrix_band_width ?
_refine.pdbx_overall_phase_error ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_diffrn_id 1
_refine.overall_SU_B 1.4240
_refine.overall_SU_ML 0.0250
_refine.overall_SU_R_Cruickshank_DPI 0.0389
_refine.overall_SU_R_free ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_average_fsc_overall ?
_refine.pdbx_average_fsc_work ?
_refine.pdbx_average_fsc_free ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id final
_refine_hist.details ?
_refine_hist.d_res_high 1.2000
_refine_hist.d_res_low 16.7200
_refine_hist.number_atoms_solvent 7
_refine_hist.number_atoms_total 51
_refine_hist.number_reflns_all ?
_refine_hist.number_reflns_obs ?
_refine_hist.number_reflns_R_free ?
_refine_hist.number_reflns_R_work ?
_refine_hist.R_factor_all ?
_refine_hist.R_factor_obs ?
_refine_hist.R_factor_R_free ?
_refine_hist.R_factor_R_work ?
_refine_hist.pdbx_number_residues_total 6
_refine_hist.pdbx_B_iso_mean_ligand ?
_refine_hist.pdbx_B_iso_mean_solvent 24.10
_refine_hist.pdbx_number_atoms_protein 44
_refine_hist.pdbx_number_atoms_nucleic_acid 0
_refine_hist.pdbx_number_atoms_ligand 0
_refine_hist.pdbx_number_atoms_lipid ?
_refine_hist.pdbx_number_atoms_carb ?
_refine_hist.pdbx_pseudo_atom_details ?
#
loop_
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.criterion
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.number
_refine_ls_restr.rejects
_refine_ls_restr.type
_refine_ls_restr.weight
_refine_ls_restr.pdbx_restraint_function
'X-RAY DIFFRACTION' ? 0.011 0.020 44 ? r_bond_refined_d ? ?
'X-RAY DIFFRACTION' ? 0.010 0.020 41 ? r_bond_other_d ? ?
'X-RAY DIFFRACTION' ? 1.545 1.993 60 ? r_angle_refined_deg ? ?
'X-RAY DIFFRACTION' ? 0.644 3.000 93 ? r_angle_other_deg ? ?
'X-RAY DIFFRACTION' ? 1.524 5.000 5 ? r_dihedral_angle_1_deg ? ?
'X-RAY DIFFRACTION' ? 10.747 20.000 1 ? r_dihedral_angle_2_deg ? ?
'X-RAY DIFFRACTION' ? 6.679 15.000 5 ? r_dihedral_angle_3_deg ? ?
'X-RAY DIFFRACTION' ? 0.098 0.200 8 ? r_chiral_restr ? ?
'X-RAY DIFFRACTION' ? 0.008 0.020 47 ? r_gen_planes_refined ? ?
'X-RAY DIFFRACTION' ? 0.002 0.020 9 ? r_gen_planes_other ? ?
'X-RAY DIFFRACTION' ? 2.056 3.000 85 ? r_rigid_bond_restr ? ?
'X-RAY DIFFRACTION' ? 5.851 5.000 1 ? r_sphericity_free ? ?
'X-RAY DIFFRACTION' ? 7.866 5.000 91 ? r_sphericity_bonded ? ?
#
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_ls_shell.d_res_high 1.2000
_refine_ls_shell.d_res_low 1.2310
_refine_ls_shell.number_reflns_all 83
_refine_ls_shell.number_reflns_obs ?
_refine_ls_shell.number_reflns_R_free 8
_refine_ls_shell.number_reflns_R_work 75
_refine_ls_shell.percent_reflns_obs 98.8100
_refine_ls_shell.percent_reflns_R_free ?
_refine_ls_shell.R_factor_all ?
_refine_ls_shell.R_factor_obs ?
_refine_ls_shell.R_factor_R_free 0.2230
_refine_ls_shell.R_factor_R_free_error 0.0000
_refine_ls_shell.R_factor_R_work 0.2170
_refine_ls_shell.redundancy_reflns_all ?
_refine_ls_shell.redundancy_reflns_obs ?
_refine_ls_shell.wR_factor_all ?
_refine_ls_shell.wR_factor_obs ?
_refine_ls_shell.wR_factor_R_free ?
_refine_ls_shell.wR_factor_R_work ?
_refine_ls_shell.pdbx_total_number_of_bins_used 20
_refine_ls_shell.pdbx_phase_error ?
_refine_ls_shell.pdbx_fsc_work ?
_refine_ls_shell.pdbx_fsc_free ?
#
_struct.entry_id 6RHD
_struct.title
'Crystal structure of the amyloid-like TSYVGV segment from the Candida albicans Agglutinin-like protein (Adhesin) 5'
_struct.pdbx_model_details Adhesin
_struct.pdbx_formula_weight ?
_struct.pdbx_formula_weight_method ?
_struct.pdbx_model_type_details ?
_struct.pdbx_CASP_flag N
#
_struct_keywords.entry_id 6RHD
_struct_keywords.text 'Amyloid fibril from Candida albicans, PROTEIN FIBRIL'
_struct_keywords.pdbx_keywords 'PROTEIN FIBRIL'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
#
_struct_ref.id 1
_struct_ref.db_name UNP
_struct_ref.db_code ALS5_CANAX
_struct_ref.pdbx_db_accession O13368
_struct_ref.pdbx_db_isoform ?
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code TSYVGV
_struct_ref.pdbx_align_begin 369
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 6RHD
_struct_ref_seq.pdbx_strand_id B
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 6
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession O13368
_struct_ref_seq.db_align_beg 369
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 374
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 6
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details 36-meric
_pdbx_struct_assembly.oligomeric_count 36
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression
1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36
_pdbx_struct_assembly_gen.asym_id_list A,B
#
_pdbx_struct_assembly_auth_evidence.id 1
_pdbx_struct_assembly_auth_evidence.assembly_id 1
_pdbx_struct_assembly_auth_evidence.experimental_support 'scanning transmission electron microscopy'
_pdbx_struct_assembly_auth_evidence.details ?
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 1_515 x,y-4,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
1.0000000000 0.0000000000 -37.4400000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
3 'crystal symmetry operation' 1_525 x,y-3,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
1.0000000000 0.0000000000 -28.0800000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
4 'crystal symmetry operation' 1_535 x,y-2,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
1.0000000000 0.0000000000 -18.7200000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
5 'crystal symmetry operation' 1_545 x,y-1,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
1.0000000000 0.0000000000 -9.3600000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
6 'crystal symmetry operation' 1_565 x,y+1,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
1.0000000000 0.0000000000 9.3600000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
7 'crystal symmetry operation' 1_575 x,y+2,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
1.0000000000 0.0000000000 18.7200000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
8 'crystal symmetry operation' 1_585 x,y+3,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
1.0000000000 0.0000000000 28.0800000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
9 'crystal symmetry operation' 1_595 x,y+4,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
1.0000000000 0.0000000000 37.4400000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
10 'crystal symmetry operation' 1_415 x-1,y-4,z 1.0000000000 0.0000000000 0.0000000000 -11.7700000000 0.0000000000
1.0000000000 0.0000000000 -37.4400000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
11 'crystal symmetry operation' 1_425 x-1,y-3,z 1.0000000000 0.0000000000 0.0000000000 -11.7700000000 0.0000000000
1.0000000000 0.0000000000 -28.0800000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
12 'crystal symmetry operation' 1_435 x-1,y-2,z 1.0000000000 0.0000000000 0.0000000000 -11.7700000000 0.0000000000
1.0000000000 0.0000000000 -18.7200000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
13 'crystal symmetry operation' 1_445 x-1,y-1,z 1.0000000000 0.0000000000 0.0000000000 -11.7700000000 0.0000000000
1.0000000000 0.0000000000 -9.3600000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
14 'crystal symmetry operation' 1_455 x-1,y,z 1.0000000000 0.0000000000 0.0000000000 -11.7700000000 0.0000000000
1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
15 'crystal symmetry operation' 1_465 x-1,y+1,z 1.0000000000 0.0000000000 0.0000000000 -11.7700000000 0.0000000000
1.0000000000 0.0000000000 9.3600000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
16 'crystal symmetry operation' 1_475 x-1,y+2,z 1.0000000000 0.0000000000 0.0000000000 -11.7700000000 0.0000000000
1.0000000000 0.0000000000 18.7200000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
17 'crystal symmetry operation' 1_485 x-1,y+3,z 1.0000000000 0.0000000000 0.0000000000 -11.7700000000 0.0000000000
1.0000000000 0.0000000000 28.0800000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
18 'crystal symmetry operation' 1_495 x-1,y+4,z 1.0000000000 0.0000000000 0.0000000000 -11.7700000000 0.0000000000
1.0000000000 0.0000000000 37.4400000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
19 'crystal symmetry operation' 2_415 -x-1,y-7/2,-z -1.0000000000 0.0000000000 0.0000000000 -11.7700000000 0.0000000000
1.0000000000 0.0000000000 -32.7600000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
20 'crystal symmetry operation' 2_425 -x-1,y-5/2,-z -1.0000000000 0.0000000000 0.0000000000 -11.7700000000 0.0000000000
1.0000000000 0.0000000000 -23.4000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
21 'crystal symmetry operation' 2_435 -x-1,y-3/2,-z -1.0000000000 0.0000000000 0.0000000000 -11.7700000000 0.0000000000
1.0000000000 0.0000000000 -14.0400000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
22 'crystal symmetry operation' 2_445 -x-1,y-1/2,-z -1.0000000000 0.0000000000 0.0000000000 -11.7700000000 0.0000000000
1.0000000000 0.0000000000 -4.6800000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
23 'crystal symmetry operation' 2_455 -x-1,y+1/2,-z -1.0000000000 0.0000000000 0.0000000000 -11.7700000000 0.0000000000
1.0000000000 0.0000000000 4.6800000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
24 'crystal symmetry operation' 2_465 -x-1,y+3/2,-z -1.0000000000 0.0000000000 0.0000000000 -11.7700000000 0.0000000000
1.0000000000 0.0000000000 14.0400000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
25 'crystal symmetry operation' 2_475 -x-1,y+5/2,-z -1.0000000000 0.0000000000 0.0000000000 -11.7700000000 0.0000000000
1.0000000000 0.0000000000 23.4000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
26 'crystal symmetry operation' 2_485 -x-1,y+7/2,-z -1.0000000000 0.0000000000 0.0000000000 -11.7700000000 0.0000000000
1.0000000000 0.0000000000 32.7600000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
27 'crystal symmetry operation' 2_495 -x-1,y+9/2,-z -1.0000000000 0.0000000000 0.0000000000 -11.7700000000 0.0000000000
1.0000000000 0.0000000000 42.1200000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
28 'crystal symmetry operation' 2_315 -x-2,y-7/2,-z -1.0000000000 0.0000000000 0.0000000000 -23.5400000000 0.0000000000
1.0000000000 0.0000000000 -32.7600000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
29 'crystal symmetry operation' 2_325 -x-2,y-5/2,-z -1.0000000000 0.0000000000 0.0000000000 -23.5400000000 0.0000000000
1.0000000000 0.0000000000 -23.4000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
30 'crystal symmetry operation' 2_335 -x-2,y-3/2,-z -1.0000000000 0.0000000000 0.0000000000 -23.5400000000 0.0000000000
1.0000000000 0.0000000000 -14.0400000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
31 'crystal symmetry operation' 2_345 -x-2,y-1/2,-z -1.0000000000 0.0000000000 0.0000000000 -23.5400000000 0.0000000000
1.0000000000 0.0000000000 -4.6800000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
32 'crystal symmetry operation' 2_355 -x-2,y+1/2,-z -1.0000000000 0.0000000000 0.0000000000 -23.5400000000 0.0000000000
1.0000000000 0.0000000000 4.6800000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
33 'crystal symmetry operation' 2_365 -x-2,y+3/2,-z -1.0000000000 0.0000000000 0.0000000000 -23.5400000000 0.0000000000
1.0000000000 0.0000000000 14.0400000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
34 'crystal symmetry operation' 2_375 -x-2,y+5/2,-z -1.0000000000 0.0000000000 0.0000000000 -23.5400000000 0.0000000000
1.0000000000 0.0000000000 23.4000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
35 'crystal symmetry operation' 2_385 -x-2,y+7/2,-z -1.0000000000 0.0000000000 0.0000000000 -23.5400000000 0.0000000000
1.0000000000 0.0000000000 32.7600000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
36 'crystal symmetry operation' 2_395 -x-2,y+9/2,-z -1.0000000000 0.0000000000 0.0000000000 -23.5400000000 0.0000000000
1.0000000000 0.0000000000 42.1200000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
#
_pdbx_phasing_MR.entry_id 6RHD
_pdbx_phasing_MR.method_rotation ?
_pdbx_phasing_MR.method_translation ?
_pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO'
_pdbx_phasing_MR.R_factor ?
_pdbx_phasing_MR.R_rigid_body ?
_pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ?
_pdbx_phasing_MR.correlation_coeff_Io_to_Ic ?
_pdbx_phasing_MR.d_res_high_rotation 1.200
_pdbx_phasing_MR.d_res_low_rotation 16.720
_pdbx_phasing_MR.d_res_high_translation 1.200
_pdbx_phasing_MR.d_res_low_translation 16.720
_pdbx_phasing_MR.packing ?
_pdbx_phasing_MR.reflns_percent_rotation ?
_pdbx_phasing_MR.reflns_percent_translation ?
_pdbx_phasing_MR.sigma_F_rotation ?
_pdbx_phasing_MR.sigma_F_translation ?
_pdbx_phasing_MR.sigma_I_rotation ?
_pdbx_phasing_MR.sigma_I_translation ?
#
_phasing.method MR
#
_pdbx_distant_solvent_atoms.id 1
_pdbx_distant_solvent_atoms.PDB_model_num 1
_pdbx_distant_solvent_atoms.auth_atom_id O
_pdbx_distant_solvent_atoms.label_alt_id ?
_pdbx_distant_solvent_atoms.auth_asym_id B
_pdbx_distant_solvent_atoms.auth_comp_id HOH
_pdbx_distant_solvent_atoms.auth_seq_id 107
_pdbx_distant_solvent_atoms.PDB_ins_code ?
_pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.34
_pdbx_distant_solvent_atoms.neighbor_ligand_distance .
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
GLY N N N N 1
GLY CA C N N 2
GLY C C N N 3
GLY O O N N 4
GLY OXT O N N 5
GLY H H N N 6
GLY H2 H N N 7
GLY HA2 H N N 8
GLY HA3 H N N 9
GLY HXT H N N 10
HOH O O N N 11
HOH H1 H N N 12
HOH H2 H N N 13
SER N N N N 14
SER CA C N S 15
SER C C N N 16
SER O O N N 17
SER CB C N N 18
SER OG O N N 19
SER OXT O N N 20
SER H H N N 21
SER H2 H N N 22
SER HA H N N 23
SER HB2 H N N 24
SER HB3 H N N 25
SER HG H N N 26
SER HXT H N N 27
THR N N N N 28
THR CA C N S 29
THR C C N N 30
THR O O N N 31
THR CB C N R 32
THR OG1 O N N 33
THR CG2 C N N 34
THR OXT O N N 35
THR H H N N 36
THR H2 H N N 37
THR HA H N N 38
THR HB H N N 39
THR HG1 H N N 40
THR HG21 H N N 41
THR HG22 H N N 42
THR HG23 H N N 43
THR HXT H N N 44
TYR N N N N 45
TYR CA C N S 46
TYR C C N N 47
TYR O O N N 48
TYR CB C N N 49
TYR CG C Y N 50
TYR CD1 C Y N 51
TYR CD2 C Y N 52
TYR CE1 C Y N 53
TYR CE2 C Y N 54
TYR CZ C Y N 55
TYR OH O N N 56
TYR OXT O N N 57
TYR H H N N 58
TYR H2 H N N 59
TYR HA H N N 60
TYR HB2 H N N 61
TYR HB3 H N N 62
TYR HD1 H N N 63
TYR HD2 H N N 64
TYR HE1 H N N 65
TYR HE2 H N N 66
TYR HH H N N 67
TYR HXT H N N 68
VAL N N N N 69
VAL CA C N S 70
VAL C C N N 71
VAL O O N N 72
VAL CB C N N 73
VAL CG1 C N N 74
VAL CG2 C N N 75
VAL OXT O N N 76
VAL H H N N 77
VAL H2 H N N 78
VAL HA H N N 79
VAL HB H N N 80
VAL HG11 H N N 81
VAL HG12 H N N 82
VAL HG13 H N N 83
VAL HG21 H N N 84
VAL HG22 H N N 85
VAL HG23 H N N 86
VAL HXT H N N 87
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
GLY N CA sing N N 1
GLY N H sing N N 2
GLY N H2 sing N N 3
GLY CA C sing N N 4
GLY CA HA2 sing N N 5
GLY CA HA3 sing N N 6
GLY C O doub N N 7
GLY C OXT sing N N 8
GLY OXT HXT sing N N 9
HOH O H1 sing N N 10
HOH O H2 sing N N 11
SER N CA sing N N 12
SER N H sing N N 13
SER N H2 sing N N 14
SER CA C sing N N 15
SER CA CB sing N N 16
SER CA HA sing N N 17
SER C O doub N N 18
SER C OXT sing N N 19
SER CB OG sing N N 20
SER CB HB2 sing N N 21
SER CB HB3 sing N N 22
SER OG HG sing N N 23
SER OXT HXT sing N N 24
THR N CA sing N N 25
THR N H sing N N 26
THR N H2 sing N N 27
THR CA C sing N N 28
THR CA CB sing N N 29
THR CA HA sing N N 30
THR C O doub N N 31
THR C OXT sing N N 32
THR CB OG1 sing N N 33
THR CB CG2 sing N N 34
THR CB HB sing N N 35
THR OG1 HG1 sing N N 36
THR CG2 HG21 sing N N 37
THR CG2 HG22 sing N N 38
THR CG2 HG23 sing N N 39
THR OXT HXT sing N N 40
TYR N CA sing N N 41
TYR N H sing N N 42
TYR N H2 sing N N 43
TYR CA C sing N N 44
TYR CA CB sing N N 45
TYR CA HA sing N N 46
TYR C O doub N N 47
TYR C OXT sing N N 48
TYR CB CG sing N N 49
TYR CB HB2 sing N N 50
TYR CB HB3 sing N N 51
TYR CG CD1 doub Y N 52
TYR CG CD2 sing Y N 53
TYR CD1 CE1 sing Y N 54
TYR CD1 HD1 sing N N 55
TYR CD2 CE2 doub Y N 56
TYR CD2 HD2 sing N N 57
TYR CE1 CZ doub Y N 58
TYR CE1 HE1 sing N N 59
TYR CE2 CZ sing Y N 60
TYR CE2 HE2 sing N N 61
TYR CZ OH sing N N 62
TYR OH HH sing N N 63
TYR OXT HXT sing N N 64
VAL N CA sing N N 65
VAL N H sing N N 66
VAL N H2 sing N N 67
VAL CA C sing N N 68
VAL CA CB sing N N 69
VAL CA HA sing N N 70
VAL C O doub N N 71
VAL C OXT sing N N 72
VAL CB CG1 sing N N 73
VAL CB CG2 sing N N 74
VAL CB HB sing N N 75
VAL CG1 HG11 sing N N 76
VAL CG1 HG12 sing N N 77
VAL CG1 HG13 sing N N 78
VAL CG2 HG21 sing N N 79
VAL CG2 HG22 sing N N 80
VAL CG2 HG23 sing N N 81
VAL OXT HXT sing N N 82
#
_atom_sites.entry_id 6RHD
_atom_sites.fract_transf_matrix[1][1] 0.084962
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.007557
_atom_sites.fract_transf_matrix[2][1] -0.000000
_atom_sites.fract_transf_matrix[2][2] 0.106838
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] -0.000000
_atom_sites.fract_transf_matrix[3][3] 0.059794
_atom_sites.fract_transf_vector[1] 0.000000
_atom_sites.fract_transf_vector[2] 0.000000
_atom_sites.fract_transf_vector[3] 0.000000
#
loop_
_atom_type.symbol
C
N
O
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 N N . THR A 1 1 ? -10.698 2.061 7.652 1.00 9.40 ? 1 THR B N 1
ATOM 2 C CA . THR A 1 1 ? -9.753 1.100 7.006 1.00 7.95 ? 1 THR B CA 1
ATOM 3 C C . THR A 1 1 ? -9.006 1.845 5.900 1.00 8.21 ? 1 THR B C 1
ATOM 4 O O . THR A 1 1 ? -9.572 2.736 5.277 1.00 8.50 ? 1 THR B O 1
ATOM 5 C CB . THR A 1 1 ? -10.577 -0.054 6.448 1.00 9.36 ? 1 THR B CB 1
ATOM 6 O OG1 . THR A 1 1 ? -11.338 -0.623 7.528 1.00 11.03 ? 1 THR B OG1 1
ATOM 7 C CG2 . THR A 1 1 ? -9.709 -1.110 5.826 1.00 10.18 ? 1 THR B CG2 1
ATOM 8 N N . SER A 1 2 ? -7.754 1.448 5.675 1.00 7.01 ? 2 SER B N 1
ATOM 9 C CA . SER A 1 2 ? -6.961 2.058 4.619 1.00 6.75 ? 2 SER B CA 1
ATOM 10 C C . SER A 1 2 ? -7.288 1.425 3.264 1.00 6.07 ? 2 SER B C 1
ATOM 11 O O . SER A 1 2 ? -7.537 0.208 3.200 1.00 5.59 ? 2 SER B O 1
ATOM 12 C CB . SER A 1 2 ? -5.469 1.939 4.933 1.00 7.66 ? 2 SER B CB 1
ATOM 13 O OG . SER A 1 2 ? -5.093 0.581 5.088 1.00 7.95 ? 2 SER B OG 1
ATOM 14 N N . TYR A 1 3 ? -7.272 2.228 2.218 1.00 6.00 ? 3 TYR B N 1
ATOM 15 C CA . TYR A 1 3 ? -7.528 1.809 0.849 1.00 6.08 ? 3 TYR B CA 1
ATOM 16 C C . TYR A 1 3 ? -6.488 2.433 -0.074 1.00 5.45 ? 3 TYR B C 1
ATOM 17 O O . TYR A 1 3 ? -6.392 3.671 -0.163 1.00 6.22 ? 3 TYR B O 1
ATOM 18 C CB . TYR A 1 3 ? -8.921 2.285 0.352 1.00 6.01 ? 3 TYR B CB 1
ATOM 19 C CG . TYR A 1 3 ? -10.081 1.506 0.936 1.00 6.70 ? 3 TYR B CG 1
ATOM 20 C CD1 . TYR A 1 3 ? -10.543 1.776 2.222 1.00 7.37 ? 3 TYR B CD1 1
ATOM 21 C CD2 . TYR A 1 3 ? -10.729 0.539 0.203 1.00 6.05 ? 3 TYR B CD2 1
ATOM 22 C CE1 . TYR A 1 3 ? -11.588 1.046 2.754 1.00 6.84 ? 3 TYR B CE1 1
ATOM 23 C CE2 . TYR A 1 3 ? -11.776 -0.176 0.717 1.00 7.59 ? 3 TYR B CE2 1
ATOM 24 C CZ . TYR A 1 3 ? -12.209 0.069 1.994 1.00 6.56 ? 3 TYR B CZ 1
ATOM 25 O OH . TYR A 1 3 ? -13.259 -0.715 2.473 1.00 7.54 ? 3 TYR B OH 1
ATOM 26 N N . VAL A 1 4 ? -5.729 1.557 -0.756 1.00 5.81 ? 4 VAL B N 1
ATOM 27 C CA . VAL A 1 4 ? -4.712 2.017 -1.698 1.00 6.59 ? 4 VAL B CA 1
ATOM 28 C C . VAL A 1 4 ? -5.008 1.436 -3.080 1.00 6.64 ? 4 VAL B C 1
ATOM 29 O O . VAL A 1 4 ? -5.190 0.215 -3.229 1.00 6.21 ? 4 VAL B O 1
ATOM 30 C CB . VAL A 1 4 ? -3.296 1.592 -1.233 1.00 6.66 ? 4 VAL B CB 1
ATOM 31 C CG1 . VAL A 1 4 ? -2.238 2.058 -2.241 1.00 7.12 ? 4 VAL B CG1 1
ATOM 32 C CG2 . VAL A 1 4 ? -3.000 2.135 0.166 1.00 7.14 ? 4 VAL B CG2 1
ATOM 33 N N . GLY A 1 5 ? -5.084 2.284 -4.086 1.00 5.73 ? 5 GLY B N 1
ATOM 34 C CA . GLY A 1 5 ? -5.336 1.855 -5.453 1.00 5.96 ? 5 GLY B CA 1
ATOM 35 C C . GLY A 1 5 ? -6.718 1.255 -5.709 1.00 7.39 ? 5 GLY B C 1
ATOM 36 O O . GLY A 1 5 ? -6.884 0.488 -6.667 1.00 7.94 ? 5 GLY B O 1
ATOM 37 N N . VAL A 1 6 ? -7.718 1.715 -4.941 1.00 6.62 ? 6 VAL B N 1
ATOM 38 C CA . VAL A 1 6 ? -9.100 1.258 -5.101 1.00 6.68 ? 6 VAL B CA 1
ATOM 39 C C . VAL A 1 6 ? -9.957 2.405 -5.641 1.00 7.32 ? 6 VAL B C 1
ATOM 40 O O . VAL A 1 6 ? -10.580 2.231 -6.732 1.00 8.78 ? 6 VAL B O 1
ATOM 41 C CB . VAL A 1 6 ? -9.686 0.698 -3.780 1.00 7.38 ? 6 VAL B CB 1
ATOM 42 C CG1 . VAL A 1 6 ? -11.145 0.272 -3.989 1.00 8.01 ? 6 VAL B CG1 1
ATOM 43 C CG2 . VAL A 1 6 ? -8.894 -0.519 -3.324 1.00 7.72 ? 6 VAL B CG2 1
ATOM 44 O OXT . VAL A 1 6 ? -10.025 3.478 -5.021 1.00 9.27 ? 6 VAL B OXT 1
HETATM 45 O O . HOH B 2 . ? -4.263 -0.615 2.741 1.00 6.92 ? 101 HOH B O 1
HETATM 46 O O . HOH B 2 . ? -9.166 4.244 8.811 1.00 20.62 ? 102 HOH B O 1
HETATM 47 O O . HOH B 2 . ? -10.720 5.015 7.171 1.00 25.12 ? 103 HOH B O 1
HETATM 48 O O . HOH B 2 . ? -6.809 -0.368 7.911 1.00 11.03 ? 104 HOH B O 1
HETATM 49 O O . HOH B 2 . ? -11.440 5.845 10.683 1.00 34.66 ? 105 HOH B O 1
HETATM 50 O O . HOH B 2 . ? -9.918 7.259 9.224 1.00 30.28 ? 106 HOH B O 1
HETATM 51 O O . HOH B 2 . ? -12.038 7.855 9.860 1.00 40.05 ? 107 HOH B O 1
#
loop_
_atom_site_anisotrop.id
_atom_site_anisotrop.type_symbol
_atom_site_anisotrop.pdbx_label_atom_id
_atom_site_anisotrop.pdbx_label_alt_id
_atom_site_anisotrop.pdbx_label_comp_id
_atom_site_anisotrop.pdbx_label_asym_id
_atom_site_anisotrop.pdbx_label_seq_id
_atom_site_anisotrop.pdbx_PDB_ins_code
_atom_site_anisotrop.U[1][1]
_atom_site_anisotrop.U[2][2]
_atom_site_anisotrop.U[3][3]
_atom_site_anisotrop.U[1][2]
_atom_site_anisotrop.U[1][3]
_atom_site_anisotrop.U[2][3]
_atom_site_anisotrop.pdbx_auth_seq_id
_atom_site_anisotrop.pdbx_auth_comp_id
_atom_site_anisotrop.pdbx_auth_asym_id
_atom_site_anisotrop.pdbx_auth_atom_id
1 N N . THR A 1 ? 0.0931 0.1170 0.1469 0.0137 0.0325 -0.0061 1 THR B N
2 C CA . THR A 1 ? 0.0651 0.0929 0.1440 0.0088 0.0139 0.0087 1 THR B CA
3 C C . THR A 1 ? 0.0799 0.1128 0.1192 0.0125 0.0178 -0.0031 1 THR B C
4 O O . THR A 1 ? 0.0704 0.1195 0.1329 0.0002 0.0190 0.0148 1 THR B O
5 C CB . THR A 1 ? 0.0884 0.1084 0.1586 -0.0071 0.0204 0.0002 1 THR B CB
6 O OG1 . THR A 1 ? 0.0827 0.1741 0.1621 0.0021 0.0391 0.0041 1 THR B OG1
7 C CG2 . THR A 1 ? 0.1114 0.1176 0.1576 -0.0138 0.0328 -0.0167 1 THR B CG2
8 N N . SER A 2 ? 0.0773 0.0954 0.0934 0.0125 0.0065 -0.0028 2 SER B N
9 C CA . SER A 2 ? 0.0669 0.0942 0.0953 0.0064 0.0019 -0.0093 2 SER B CA
10 C C . SER A 2 ? 0.0439 0.0908 0.0956 -0.0015 -0.0042 -0.0036 2 SER B C
11 O O . SER A 2 ? 0.0444 0.0754 0.0926 0.0058 0.0014 0.0079 2 SER B O
12 C CB . SER A 2 ? 0.0680 0.1325 0.0903 0.0053 0.0029 -0.0142 2 SER B CB
13 O OG . SER A 2 ? 0.0556 0.1354 0.1108 0.0079 -0.0087 -0.0086 2 SER B OG
14 N N . TYR A 3 ? 0.0480 0.0744 0.1056 0.0120 0.0034 -0.0025 3 TYR B N
15 C CA . TYR A 3 ? 0.0463 0.0789 0.1058 -0.0158 -0.0175 0.0098 3 TYR B CA
16 C C . TYR A 3 ? 0.0351 0.0835 0.0883 -0.0020 -0.0147 -0.0004 3 TYR B C
17 O O . TYR A 3 ? 0.0584 0.0831 0.0945 -0.0163 0.0008 -0.0020 3 TYR B O
18 C CB . TYR A 3 ? 0.0522 0.0801 0.0961 -0.0007 -0.0123 -0.0002 3 TYR B CB
19 C CG . TYR A 3 ? 0.0399 0.0942 0.1205 -0.0016 -0.0134 -0.0004 3 TYR B CG
20 C CD1 . TYR A 3 ? 0.0480 0.1118 0.1200 -0.0035 -0.0201 -0.0068 3 TYR B CD1
21 C CD2 . TYR A 3 ? 0.0497 0.0689 0.1111 0.0089 -0.0073 0.0037 3 TYR B CD2
22 C CE1 . TYR A 3 ? 0.0437 0.1043 0.1117 0.0112 -0.0099 -0.0079 3 TYR B CE1
23 C CE2 . TYR A 3 ? 0.0656 0.1046 0.1179 -0.0226 -0.0194 0.0018 3 TYR B CE2
24 C CZ . TYR A 3 ? 0.0368 0.0870 0.1254 -0.0075 -0.0059 0.0081 3 TYR B CZ
25 O OH . TYR A 3 ? 0.0406 0.0930 0.1529 -0.0089 -0.0068 0.0267 3 TYR B OH
26 N N . VAL A 4 ? 0.0395 0.0714 0.1098 0.0074 -0.0117 0.0059 4 VAL B N
27 C CA . VAL A 4 ? 0.0566 0.0904 0.1034 -0.0017 -0.0068 -0.0014 4 VAL B CA
28 C C . VAL A 4 ? 0.0515 0.1031 0.0978 0.0044 -0.0008 -0.0016 4 VAL B C
29 O O . VAL A 4 ? 0.0486 0.0947 0.0924 0.0034 0.0061 -0.0010 4 VAL B O
30 C CB . VAL A 4 ? 0.0623 0.0890 0.1017 0.0148 0.0043 0.0059 4 VAL B CB
31 C CG1 . VAL A 4 ? 0.0674 0.1026 0.1005 0.0006 0.0057 -0.0043 4 VAL B CG1
32 C CG2 . VAL A 4 ? 0.0719 0.0969 0.1025 0.0051 0.0092 0.0041 4 VAL B CG2
33 N N . GLY A 5 ? 0.0396 0.0651 0.1128 0.0077 0.0119 -0.0070 5 GLY B N
34 C CA . GLY A 5 ? 0.0497 0.0714 0.1053 -0.0083 0.0066 0.0072 5 GLY B CA
35 C C . GLY A 5 ? 0.0583 0.1009 0.1213 -0.0188 0.0050 -0.0108 5 GLY B C
36 O O . GLY A 5 ? 0.0468 0.1324 0.1224 -0.0134 0.0110 -0.0233 5 GLY B O
37 N N . VAL A 6 ? 0.0629 0.0766 0.1119 -0.0178 0.0047 -0.0050 6 VAL B N
38 C CA . VAL A 6 ? 0.0470 0.0853 0.1216 0.0069 0.0030 -0.0084 6 VAL B CA
39 C C . VAL A 6 ? 0.0507 0.1016 0.1257 0.0025 -0.0101 0.0093 6 VAL B C
40 O O . VAL A 6 ? 0.0645 0.1482 0.1208 0.0141 -0.0155 0.0015 6 VAL B O
41 C CB . VAL A 6 ? 0.0643 0.0993 0.1165 0.0065 0.0080 -0.0065 6 VAL B CB
42 C CG1 . VAL A 6 ? 0.0632 0.1140 0.1268 0.0087 0.0011 0.0067 6 VAL B CG1
43 C CG2 . VAL A 6 ? 0.0804 0.1002 0.1128 0.0048 0.0106 0.0008 6 VAL B CG2
44 O OXT . VAL A 6 ? 0.0914 0.1353 0.1254 -0.0167 -0.0074 -0.0148 6 VAL B OXT
45 O O . HOH B . ? 0.0393 0.0827 0.1408 -0.0067 0.0077 -0.0068 101 HOH B O
46 O O . HOH B . ? 0.1251 0.3064 0.3517 -0.0884 0.0054 0.0532 102 HOH B O
47 O O . HOH B . ? 0.2826 0.1156 0.5562 0.0502 -0.0083 -0.0137 103 HOH B O
48 O O . HOH B . ? 0.1294 0.1318 0.1578 0.0313 0.0017 -0.0105 104 HOH B O
49 O O . HOH B . ? 0.6512 0.3949 0.2705 -0.2450 -0.1607 0.1060 105 HOH B O
50 O O . HOH B . ? 0.2056 0.6107 0.3343 0.0204 -0.0279 0.0556 106 HOH B O
51 O O . HOH B . ? 0.2930 0.6489 0.5796 -0.1815 0.0776 -0.1824 107 HOH B O
#