data_6PO6
#
_entry.id 6PO6
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.381
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 6PO6 pdb_00006po6 10.2210/pdb6po6/pdb
WWPDB D_1000242762 ? ?
EMDB EMD-20411 ? ?
#
_pdbx_database_related.db_name EMDB
_pdbx_database_related.details 'MicroED Structure of a Natural Product VPAThiaGlu'
_pdbx_database_related.db_id EMD-20411
_pdbx_database_related.content_type 'associated EM volume'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.entry_id 6PO6
_pdbx_database_status.recvd_initial_deposition_date 2019-07-03
_pdbx_database_status.SG_entry N
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_nmr_data ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
_audit_author.identifier_ORCID
'Halaby, S.' 1 ?
'Gonen, T.' 2 ?
'Ting, C.P.' 3 ?
'Funk, M.A.' 4 ?
'van der Donk, W.A.' 5 ?
#
_citation.abstract ?
_citation.abstract_id_CAS ?
_citation.book_id_ISBN ?
_citation.book_publisher ?
_citation.book_publisher_city ?
_citation.book_title ?
_citation.coordinate_linkage ?
_citation.country US
_citation.database_id_Medline ?
_citation.details ?
_citation.id primary
_citation.journal_abbrev Science
_citation.journal_id_ASTM SCIEAS
_citation.journal_id_CSD 0038
_citation.journal_id_ISSN 1095-9203
_citation.journal_full ?
_citation.journal_issue ?
_citation.journal_volume 365
_citation.language ?
_citation.page_first 280
_citation.page_last 284
_citation.title 'Use of a scaffold peptide in the biosynthesis of amino acid-derived natural products.'
_citation.year 2019
_citation.database_id_CSD ?
_citation.pdbx_database_id_DOI 10.1126/science.aau6232
_citation.pdbx_database_id_PubMed 31320540
_citation.unpublished_flag ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Ting, C.P.' 1 0000-0003-1386-1902
primary 'Funk, M.A.' 2 0000-0003-1898-9008
primary 'Halaby, S.L.' 3 0000-0001-7724-8176
primary 'Zhang, Z.' 4 0000-0003-3993-1163
primary 'Gonen, T.' 5 0000-0002-9254-4069
primary 'van der Donk, W.A.' 6 0000-0002-5467-7071
#
_cell.angle_alpha 90.000
_cell.angle_alpha_esd ?
_cell.angle_beta 94.000
_cell.angle_beta_esd ?
_cell.angle_gamma 90.000
_cell.angle_gamma_esd ?
_cell.entry_id 6PO6
_cell.details ?
_cell.formula_units_Z ?
_cell.length_a 9.660
_cell.length_a_esd ?
_cell.length_b 9.580
_cell.length_b_esd ?
_cell.length_c 12.140
_cell.length_c_esd ?
_cell.volume ?
_cell.volume_esd ?
_cell.Z_PDB 2
_cell.reciprocal_angle_alpha ?
_cell.reciprocal_angle_beta ?
_cell.reciprocal_angle_gamma ?
_cell.reciprocal_angle_alpha_esd ?
_cell.reciprocal_angle_beta_esd ?
_cell.reciprocal_angle_gamma_esd ?
_cell.reciprocal_length_a ?
_cell.reciprocal_length_b ?
_cell.reciprocal_length_c ?
_cell.reciprocal_length_a_esd ?
_cell.reciprocal_length_b_esd ?
_cell.reciprocal_length_c_esd ?
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 6PO6
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 4
_symmetry.space_group_name_Hall ?
_symmetry.space_group_name_H-M 'P 1 21 1'
_symmetry.pdbx_full_space_group_name_H-M ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer nat YFAThiaGlu 482.550 1 ? ? ? ?
2 water nat water 18.015 1 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer yes
_entity_poly.pdbx_seq_one_letter_code 'VFA(OV7)'
_entity_poly.pdbx_seq_one_letter_code_can VFAX
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 VAL n
1 2 PHE n
1 3 ALA n
1 4 OV7 n
#
_entity_src_nat.entity_id 1
_entity_src_nat.pdbx_src_id 1
_entity_src_nat.pdbx_alt_source_flag sample
_entity_src_nat.pdbx_beg_seq_num 1
_entity_src_nat.pdbx_end_seq_num 4
_entity_src_nat.common_name ?
_entity_src_nat.pdbx_organism_scientific 'Pseudomonas syringae'
_entity_src_nat.pdbx_ncbi_taxonomy_id 317
_entity_src_nat.genus ?
_entity_src_nat.species ?
_entity_src_nat.strain ?
_entity_src_nat.tissue ?
_entity_src_nat.tissue_fraction ?
_entity_src_nat.pdbx_secretion ?
_entity_src_nat.pdbx_fragment ?
_entity_src_nat.pdbx_variant ?
_entity_src_nat.pdbx_cell_line ?
_entity_src_nat.pdbx_atcc ?
_entity_src_nat.pdbx_cellular_location ?
_entity_src_nat.pdbx_organ ?
_entity_src_nat.pdbx_organelle ?
_entity_src_nat.pdbx_cell ?
_entity_src_nat.pdbx_plasmid_name ?
_entity_src_nat.pdbx_plasmid_details ?
_entity_src_nat.details ?
#
_struct_ref.id 1
_struct_ref.db_name PDB
_struct_ref.db_code 6PO6
_struct_ref.pdbx_db_accession 6PO6
_struct_ref.pdbx_db_isoform ?
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_align_begin 1
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 6PO6
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 4
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession 6PO6
_struct_ref_seq.db_align_beg 1
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 4
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 4
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093
HOH non-polymer . WATER ? 'H2 O' 18.015
OV7 'D-peptide linking' . '(2R)-amino[(carboxymethyl)sulfanyl]acetic acid' ? 'C4 H7 N O4 S' 165.168
PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189
VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146
#
_exptl.absorpt_coefficient_mu ?
_exptl.absorpt_correction_T_max ?
_exptl.absorpt_correction_T_min ?
_exptl.absorpt_correction_type ?
_exptl.absorpt_process_details ?
_exptl.entry_id 6PO6
_exptl.crystals_number ?
_exptl.details ?
_exptl.method 'ELECTRON CRYSTALLOGRAPHY'
_exptl.method_details ?
#
_reflns.B_iso_Wilson_estimate 5.908
_reflns.entry_id 6PO6
_reflns.data_reduction_details ?
_reflns.data_reduction_method ?
_reflns.d_resolution_high 1.000
_reflns.d_resolution_low ?
_reflns.details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.number_all ?
_reflns.number_obs 2262
_reflns.observed_criterion ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.observed_criterion_I_max ?
_reflns.observed_criterion_I_min ?
_reflns.observed_criterion_sigma_F ?
_reflns.observed_criterion_sigma_I -3.000
_reflns.percent_possible_obs 95.800
_reflns.R_free_details ?
_reflns.Rmerge_F_all ?
_reflns.Rmerge_F_obs ?
_reflns.Friedel_coverage ?
_reflns.number_gt ?
_reflns.threshold_expression ?
_reflns.pdbx_redundancy ?
_reflns.pdbx_Rmerge_I_obs 0.216
_reflns.pdbx_Rmerge_I_all ?
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_av_sigmaI ?
_reflns.pdbx_netI_over_sigmaI 3.740
_reflns.pdbx_res_netI_over_av_sigmaI_2 ?
_reflns.pdbx_res_netI_over_sigmaI_2 ?
_reflns.pdbx_chi_squared 0.838
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_d_res_high_opt ?
_reflns.pdbx_d_res_low_opt ?
_reflns.pdbx_d_res_opt_method ?
_reflns.phase_calculation_details ?
_reflns.pdbx_Rrim_I_all 0.270
_reflns.pdbx_Rpim_I_all ?
_reflns.pdbx_d_opt ?
_reflns.pdbx_number_measured_all 5689
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
_reflns.pdbx_CC_half 0.927
_reflns.pdbx_R_split ?
#
loop_
_reflns_shell.d_res_high
_reflns_shell.d_res_low
_reflns_shell.meanI_over_sigI_all
_reflns_shell.meanI_over_sigI_obs
_reflns_shell.number_measured_all
_reflns_shell.number_measured_obs
_reflns_shell.number_possible
_reflns_shell.number_unique_all
_reflns_shell.number_unique_obs
_reflns_shell.percent_possible_all
_reflns_shell.percent_possible_obs
_reflns_shell.Rmerge_F_all
_reflns_shell.Rmerge_F_obs
_reflns_shell.Rmerge_I_all
_reflns_shell.Rmerge_I_obs
_reflns_shell.meanI_over_sigI_gt
_reflns_shell.meanI_over_uI_all
_reflns_shell.meanI_over_uI_gt
_reflns_shell.number_measured_gt
_reflns_shell.number_unique_gt
_reflns_shell.percent_possible_gt
_reflns_shell.Rmerge_F_gt
_reflns_shell.Rmerge_I_gt
_reflns_shell.pdbx_redundancy
_reflns_shell.pdbx_Rsym_value
_reflns_shell.pdbx_chi_squared
_reflns_shell.pdbx_netI_over_sigmaI_all
_reflns_shell.pdbx_netI_over_sigmaI_obs
_reflns_shell.pdbx_Rrim_I_all
_reflns_shell.pdbx_Rpim_I_all
_reflns_shell.pdbx_rejects
_reflns_shell.pdbx_ordinal
_reflns_shell.pdbx_diffrn_id
_reflns_shell.pdbx_CC_half
_reflns_shell.pdbx_R_split
1.000 1.040 ? 2.040 ? 777 319 ? 308 96.600 ? ? ? ? 0.405 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.507 ? 0 1 1 0.614 ?
1.040 1.100 ? 2.490 ? 638 262 ? 247 94.300 ? ? ? ? 0.318 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.395 ? 0 2 1 0.704 ?
1.100 1.150 ? 3.220 ? 584 242 ? 234 96.700 ? ? ? ? 0.226 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.284 ? 0 3 1 0.876 ?
1.150 1.220 ? 3.220 ? 631 263 ? 249 94.700 ? ? ? ? 0.256 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.317 ? 0 4 1 0.874 ?
1.220 1.310 ? 3.290 ? 509 214 ? 206 96.300 ? ? ? ? 0.276 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.346 ? 0 5 1 0.747 ?
1.310 1.410 ? 3.910 ? 552 228 ? 214 93.900 ? ? ? ? 0.231 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.289 ? 0 6 1 0.851 ?
1.410 1.550 ? 4.220 ? 482 202 ? 197 97.500 ? ? ? ? 0.215 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.270 ? 0 7 1 0.850 ?
1.550 1.730 ? 4.830 ? 444 181 ? 175 96.700 ? ? ? ? 0.231 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.285 ? 0 8 1 0.841 ?
1.730 2.000 ? 5.310 ? 370 158 ? 150 94.900 ? ? ? ? 0.175 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.222 ? 0 9 1 0.906 ?
2.000 2.450 ? 5.880 ? 332 136 ? 130 95.600 ? ? ? ? 0.171 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.211 ? 0 10 1 0.934 ?
2.450 3.460 ? 5.970 ? 240 101 ? 99 98.000 ? ? ? ? 0.166 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.211 ? 0 11 1 0.885 ?
3.460 ? ? 5.950 ? 130 55 ? 53 96.400 ? ? ? ? 0.195 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.241 ? 0 12 1 0.949 ?
#
_refine.aniso_B[1][1] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[2][3] ?
_refine.aniso_B[3][3] ?
_refine.B_iso_max 8.690
_refine.B_iso_mean 3.7459
_refine.B_iso_min 1.700
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.details ?
_refine.diff_density_max ?
_refine.diff_density_max_esd ?
_refine.diff_density_min ?
_refine.diff_density_min_esd ?
_refine.diff_density_rms ?
_refine.diff_density_rms_esd ?
_refine.entry_id 6PO6
_refine.pdbx_refine_id 'ELECTRON CRYSTALLOGRAPHY'
_refine.ls_abs_structure_details ?
_refine.ls_abs_structure_Flack ?
_refine.ls_abs_structure_Flack_esd ?
_refine.ls_abs_structure_Rogers ?
_refine.ls_abs_structure_Rogers_esd ?
_refine.ls_d_res_high 1.0
_refine.ls_d_res_low 12.11
_refine.ls_extinction_coef ?
_refine.ls_extinction_coef_esd ?
_refine.ls_extinction_expression ?
_refine.ls_extinction_method ?
_refine.ls_goodness_of_fit_all ?
_refine.ls_goodness_of_fit_all_esd ?
_refine.ls_goodness_of_fit_obs ?
_refine.ls_goodness_of_fit_obs_esd ?
_refine.ls_hydrogen_treatment ?
_refine.ls_matrix_type ?
_refine.ls_number_constraints ?
_refine.ls_number_parameters ?
_refine.ls_number_reflns_all ?
_refine.ls_number_reflns_obs 2262
_refine.ls_number_reflns_R_free ?
_refine.ls_number_reflns_R_work ?
_refine.ls_number_restraints ?
_refine.ls_percent_reflns_obs 95.8
_refine.ls_percent_reflns_R_free ?
_refine.ls_R_factor_all ?
_refine.ls_R_factor_obs ?
_refine.ls_R_factor_R_free ?
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_R_factor_R_work ?
_refine.ls_R_Fsqd_factor_obs ?
_refine.ls_R_I_factor_obs ?
_refine.ls_redundancy_reflns_all ?
_refine.ls_redundancy_reflns_obs ?
_refine.ls_restrained_S_all ?
_refine.ls_restrained_S_obs ?
_refine.ls_shift_over_esd_max ?
_refine.ls_shift_over_esd_mean ?
_refine.ls_structure_factor_coef ?
_refine.ls_weighting_details ?
_refine.ls_weighting_scheme ?
_refine.ls_wR_factor_all ?
_refine.ls_wR_factor_obs ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.occupancy_max ?
_refine.occupancy_min ?
_refine.solvent_model_details ?
_refine.solvent_model_param_bsol ?
_refine.solvent_model_param_ksol ?
_refine.ls_R_factor_gt ?
_refine.ls_goodness_of_fit_gt ?
_refine.ls_goodness_of_fit_ref ?
_refine.ls_shift_over_su_max ?
_refine.ls_shift_over_su_max_lt ?
_refine.ls_shift_over_su_mean ?
_refine.ls_shift_over_su_mean_lt ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F ?
_refine.pdbx_ls_sigma_Fsqd ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_ls_cross_valid_method NONE
_refine.pdbx_method_to_determine_struct AB_INITIO
_refine.pdbx_starting_model ?
_refine.pdbx_stereochemistry_target_values ?
_refine.pdbx_R_Free_selection_details ?
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.pdbx_real_space_R ?
_refine.pdbx_density_correlation ?
_refine.pdbx_pd_number_of_powder_patterns ?
_refine.pdbx_pd_number_of_points ?
_refine.pdbx_pd_meas_number_of_points ?
_refine.pdbx_pd_proc_ls_prof_R_factor ?
_refine.pdbx_pd_proc_ls_prof_wR_factor ?
_refine.pdbx_pd_Marquardt_correlation_coeff ?
_refine.pdbx_pd_Fsqrd_R_factor ?
_refine.pdbx_pd_ls_matrix_band_width ?
_refine.pdbx_overall_phase_error ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_diffrn_id 1
_refine.overall_SU_B ?
_refine.overall_SU_ML ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_average_fsc_overall ?
_refine.pdbx_average_fsc_work ?
_refine.pdbx_average_fsc_free ?
#
_struct.entry_id 6PO6
_struct.title 'MicroED Structure of a Natural Product VFAThiaGlu'
_struct.pdbx_model_details ?
_struct.pdbx_formula_weight ?
_struct.pdbx_formula_weight_method ?
_struct.pdbx_model_type_details ?
_struct.pdbx_CASP_flag N
#
_struct_keywords.entry_id 6PO6
_struct_keywords.text
'Ribosomal synthesized small peptide, MicroED, microcrystal electron diffraction, UNKNOWN FUNCTION'
_struct_keywords.pdbx_keywords 'UNKNOWN FUNCTION'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
#
_struct_conn.id covale1
_struct_conn.conn_type_id covale
_struct_conn.pdbx_leaving_atom_flag both
_struct_conn.pdbx_PDB_id ?
_struct_conn.ptnr1_label_asym_id A
_struct_conn.ptnr1_label_comp_id ALA
_struct_conn.ptnr1_label_seq_id 3
_struct_conn.ptnr1_label_atom_id C
_struct_conn.pdbx_ptnr1_label_alt_id ?
_struct_conn.pdbx_ptnr1_PDB_ins_code ?
_struct_conn.pdbx_ptnr1_standard_comp_id ?
_struct_conn.ptnr1_symmetry 1_555
_struct_conn.ptnr2_label_asym_id A
_struct_conn.ptnr2_label_comp_id OV7
_struct_conn.ptnr2_label_seq_id 4
_struct_conn.ptnr2_label_atom_id N
_struct_conn.pdbx_ptnr2_label_alt_id ?
_struct_conn.pdbx_ptnr2_PDB_ins_code ?
_struct_conn.ptnr1_auth_asym_id A
_struct_conn.ptnr1_auth_comp_id ALA
_struct_conn.ptnr1_auth_seq_id 3
_struct_conn.ptnr2_auth_asym_id A
_struct_conn.ptnr2_auth_comp_id OV7
_struct_conn.ptnr2_auth_seq_id 4
_struct_conn.ptnr2_symmetry 1_555
_struct_conn.pdbx_ptnr3_label_atom_id ?
_struct_conn.pdbx_ptnr3_label_seq_id ?
_struct_conn.pdbx_ptnr3_label_comp_id ?
_struct_conn.pdbx_ptnr3_label_asym_id ?
_struct_conn.pdbx_ptnr3_label_alt_id ?
_struct_conn.pdbx_ptnr3_PDB_ins_code ?
_struct_conn.details ?
_struct_conn.pdbx_dist_value 1.343
_struct_conn.pdbx_value_order ?
_struct_conn.pdbx_role ?
#
_struct_conn_type.id covale
_struct_conn_type.criteria ?
_struct_conn_type.reference ?
#
_atom_sites.entry_id 6PO6
_atom_sites.Cartn_transf_matrix[1][1] ?
_atom_sites.Cartn_transf_matrix[1][2] ?
_atom_sites.Cartn_transf_matrix[1][3] ?
_atom_sites.Cartn_transf_matrix[2][1] ?
_atom_sites.Cartn_transf_matrix[2][2] ?
_atom_sites.Cartn_transf_matrix[2][3] ?
_atom_sites.Cartn_transf_matrix[3][1] ?
_atom_sites.Cartn_transf_matrix[3][2] ?
_atom_sites.Cartn_transf_matrix[3][3] ?
_atom_sites.Cartn_transf_vector[1] ?
_atom_sites.Cartn_transf_vector[2] ?
_atom_sites.Cartn_transf_vector[3] ?
_atom_sites.fract_transf_matrix[1][1] 0.103520
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.007237
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.104384
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.082573
_atom_sites.fract_transf_vector[1] 0.000000
_atom_sites.fract_transf_vector[2] 0.000000
_atom_sites.fract_transf_vector[3] 0.000000
_atom_sites.solution_primary ?
_atom_sites.solution_secondary ?
_atom_sites.solution_hydrogens ?
_atom_sites.special_details ?
#
loop_
_atom_type.symbol
C
N
O
S
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 N N . VAL A 1 1 ? 7.081 4.632 10.987 1.00 6.49 ? 1 VAL A N 1
ATOM 2 C CA . VAL A 1 1 ? 6.625 5.711 10.031 1.00 2.55 ? 1 VAL A CA 1
ATOM 3 C C . VAL A 1 1 ? 5.471 5.069 9.232 1.00 2.40 ? 1 VAL A C 1
ATOM 4 O O . VAL A 1 1 ? 5.383 3.815 9.176 1.00 3.07 ? 1 VAL A O 1
ATOM 5 C CB . VAL A 1 1 ? 7.503 6.307 9.268 1.00 4.31 ? 1 VAL A CB 1
ATOM 6 C CG1 . VAL A 1 1 ? 8.753 6.848 9.885 1.00 2.74 ? 1 VAL A CG1 1
ATOM 7 C CG2 . VAL A 1 1 ? 7.914 5.444 8.029 1.00 5.25 ? 1 VAL A CG2 1
ATOM 8 N N . PHE A 1 2 ? 4.577 5.875 8.728 1.00 3.07 ? 2 PHE A N 1
ATOM 9 C CA . PHE A 1 2 ? 3.815 5.511 7.536 1.00 2.33 ? 2 PHE A CA 1
ATOM 10 C C . PHE A 1 2 ? 4.433 6.095 6.204 1.00 3.39 ? 2 PHE A C 1
ATOM 11 O O . PHE A 1 2 ? 4.646 7.304 6.293 1.00 2.08 ? 2 PHE A O 1
ATOM 12 C CB . PHE A 1 2 ? 2.377 5.980 7.862 1.00 3.25 ? 2 PHE A CB 1
ATOM 13 C CG . PHE A 1 2 ? 1.586 5.686 6.569 1.00 2.95 ? 2 PHE A CG 1
ATOM 14 C CD1 . PHE A 1 2 ? 1.097 4.407 6.486 1.00 1.90 ? 2 PHE A CD1 1
ATOM 15 C CD2 . PHE A 1 2 ? 1.231 6.573 5.780 1.00 3.02 ? 2 PHE A CD2 1
ATOM 16 C CE1 . PHE A 1 2 ? 0.420 4.192 5.131 1.00 3.36 ? 2 PHE A CE1 1
ATOM 17 C CE2 . PHE A 1 2 ? 0.634 6.454 4.465 1.00 1.70 ? 2 PHE A CE2 1
ATOM 18 C CZ . PHE A 1 2 ? 0.106 5.184 4.348 1.00 2.74 ? 2 PHE A CZ 1
ATOM 19 N N . ALA A 1 3 ? 4.486 5.339 5.270 1.00 2.86 ? 3 ALA A N 1
ATOM 20 C CA . ALA A 1 3 ? 4.901 5.760 4.043 1.00 3.62 ? 3 ALA A CA 1
ATOM 21 C C . ALA A 1 3 ? 4.088 5.047 2.982 1.00 3.14 ? 3 ALA A C 1
ATOM 22 O O . ALA A 1 3 ? 4.363 3.840 2.811 1.00 3.98 ? 3 ALA A O 1
ATOM 23 C CB . ALA A 1 3 ? 6.345 5.597 3.997 1.00 2.74 ? 3 ALA A CB 1
HETATM 24 N N . OV7 A 1 4 ? 3.338 5.787 2.149 1.00 3.19 ? 4 OV7 A N 1
HETATM 25 C CA . OV7 A 1 4 ? 2.606 5.137 1.203 1.00 2.31 ? 4 OV7 A CA 1
HETATM 26 C C . OV7 A 1 4 ? 1.307 5.619 0.977 1.00 3.15 ? 4 OV7 A C 1
HETATM 27 S SB2 . OV7 A 1 4 ? 3.623 5.182 -0.375 1.00 4.27 ? 4 OV7 A SB2 1
HETATM 28 O OXT . OV7 A 1 4 ? 1.036 6.767 1.338 1.00 4.45 ? 4 OV7 A OXT 1
HETATM 29 O O . OV7 A 1 4 ? 0.487 4.860 0.455 1.00 5.07 ? 4 OV7 A O 1
HETATM 30 C CG3 . OV7 A 1 4 ? 3.403 3.574 -0.836 1.00 6.35 ? 4 OV7 A CG3 1
HETATM 31 C CD . OV7 A 1 4 ? 1.935 3.214 -1.358 1.00 5.21 ? 4 OV7 A CD 1
HETATM 32 O OE1 . OV7 A 1 4 ? 1.480 2.280 -0.774 1.00 5.42 ? 4 OV7 A OE1 1
HETATM 33 O OE2 . OV7 A 1 4 ? 1.497 3.708 -2.471 1.00 6.31 ? 4 OV7 A OE2 1
HETATM 34 O O . HOH B 2 . ? 5.794 3.525 13.057 1.00 8.69 ? 101 HOH A O 1
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 VAL 1 1 1 VAL VAL A . n
A 1 2 PHE 2 2 2 PHE PHE A . n
A 1 3 ALA 3 3 3 ALA ALA A . n
A 1 4 OV7 4 4 4 OV7 XXX A . n
#
_pdbx_nonpoly_scheme.asym_id B
_pdbx_nonpoly_scheme.entity_id 2
_pdbx_nonpoly_scheme.mon_id HOH
_pdbx_nonpoly_scheme.ndb_seq_num 1
_pdbx_nonpoly_scheme.pdb_seq_num 101
_pdbx_nonpoly_scheme.auth_seq_num 1
_pdbx_nonpoly_scheme.pdb_mon_id HOH
_pdbx_nonpoly_scheme.auth_mon_id HOH
_pdbx_nonpoly_scheme.pdb_strand_id A
_pdbx_nonpoly_scheme.pdb_ins_code .
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_and_software_defined_assembly
_pdbx_struct_assembly.method_details PISA
_pdbx_struct_assembly.oligomeric_details monomeric
_pdbx_struct_assembly.oligomeric_count 1
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B
#
loop_
_pdbx_struct_assembly_prop.biol_id
_pdbx_struct_assembly_prop.type
_pdbx_struct_assembly_prop.value
_pdbx_struct_assembly_prop.details
1 'ABSA (A^2)' 0 ?
1 MORE 0 ?
1 'SSA (A^2)' 650 ?
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2019-08-07
2 'Structure model' 1 1 2019-12-18
3 'Structure model' 2 0 2023-11-15
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Author supporting evidence'
2 3 'Structure model' 'Atomic model'
3 3 'Structure model' 'Data collection'
4 3 'Structure model' 'Database references'
5 3 'Structure model' 'Derived calculations'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 2 'Structure model' pdbx_audit_support
2 3 'Structure model' atom_site
3 3 'Structure model' chem_comp_atom
4 3 'Structure model' chem_comp_bond
5 3 'Structure model' database_2
6 3 'Structure model' struct_conn
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 2 'Structure model' '_pdbx_audit_support.funding_organization'
2 3 'Structure model' '_atom_site.auth_atom_id'
3 3 'Structure model' '_atom_site.label_atom_id'
4 3 'Structure model' '_database_2.pdbx_DOI'
5 3 'Structure model' '_database_2.pdbx_database_accession'
6 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
#
loop_
_space_group_symop.id
_space_group_symop.operation_xyz
1 x,y,z
2 -x,y+1/2,-z
#
_software.citation_id ?
_software.classification refinement
_software.compiler_name ?
_software.compiler_version ?
_software.contact_author ?
_software.contact_author_email ?
_software.date ?
_software.description ?
_software.dependencies ?
_software.hardware ?
_software.language ?
_software.location ?
_software.mods ?
_software.name SHELX
_software.os ?
_software.os_version ?
_software.type ?
_software.version .
_software.pdbx_ordinal 1
#
_em_3d_fitting.entry_id 6PO6
_em_3d_fitting.id 1
_em_3d_fitting.details ?
_em_3d_fitting.overall_b_value 3.746
_em_3d_fitting.ref_protocol 'AB INITIO MODEL'
_em_3d_fitting.ref_space RECIPROCAL
_em_3d_fitting.target_criteria ?
_em_3d_fitting.method ?
#
_em_3d_reconstruction.entry_id 6PO6
_em_3d_reconstruction.id 1
_em_3d_reconstruction.algorithm ?
_em_3d_reconstruction.details ?
_em_3d_reconstruction.refinement_type ?
_em_3d_reconstruction.image_processing_id 1
_em_3d_reconstruction.num_class_averages ?
_em_3d_reconstruction.num_particles ?
_em_3d_reconstruction.resolution ?
_em_3d_reconstruction.resolution_method 'DIFFRACTION PATTERN/LAYERLINES'
_em_3d_reconstruction.symmetry_type '3D CRYSTAL'
_em_3d_reconstruction.method ?
_em_3d_reconstruction.nominal_pixel_size ?
_em_3d_reconstruction.actual_pixel_size ?
_em_3d_reconstruction.magnification_calibration ?
#
_em_buffer.id 1
_em_buffer.details ?
_em_buffer.pH 7.0
_em_buffer.specimen_id 1
_em_buffer.name ?
#
_em_entity_assembly.id 1
_em_entity_assembly.parent_id 0
_em_entity_assembly.details ?
_em_entity_assembly.name VAL-PHE-ALA-ThiaGLU
_em_entity_assembly.source NATURAL
_em_entity_assembly.type COMPLEX
_em_entity_assembly.entity_id_list 1
_em_entity_assembly.synonym ?
_em_entity_assembly.oligomeric_details ?
#
_em_image_scans.entry_id 6PO6
_em_image_scans.id 1
_em_image_scans.dimension_height 2048
_em_image_scans.dimension_width 2048
_em_image_scans.frames_per_image ?
_em_image_scans.image_recording_id 1
_em_image_scans.sampling_size 28
_em_image_scans.scanner_model ?
_em_image_scans.used_frames_per_image ?
_em_image_scans.citation_id ?
_em_image_scans.number_digital_images ?
_em_image_scans.od_range ?
_em_image_scans.quant_bit_size ?
_em_image_scans.details ?
#
_em_imaging.id 1
_em_imaging.entry_id 6PO6
_em_imaging.accelerating_voltage 200
_em_imaging.alignment_procedure ?
_em_imaging.c2_aperture_diameter ?
_em_imaging.calibrated_defocus_max ?
_em_imaging.calibrated_defocus_min ?
_em_imaging.calibrated_magnification ?
_em_imaging.cryogen NITROGEN
_em_imaging.details ?
_em_imaging.electron_source 'FIELD EMISSION GUN'
_em_imaging.illumination_mode OTHER
_em_imaging.microscope_model 'FEI TALOS ARCTICA'
_em_imaging.mode DIFFRACTION
_em_imaging.nominal_cs ?
_em_imaging.nominal_defocus_max ?
_em_imaging.nominal_defocus_min ?
_em_imaging.nominal_magnification ?
_em_imaging.recording_temperature_maximum 100
_em_imaging.recording_temperature_minimum 77
_em_imaging.residual_tilt ?
_em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER'
_em_imaging.specimen_id 1
_em_imaging.citation_id ?
_em_imaging.date ?
_em_imaging.temperature ?
_em_imaging.tilt_angle_min ?
_em_imaging.tilt_angle_max ?
_em_imaging.astigmatism ?
_em_imaging.detector_distance ?
_em_imaging.electron_beam_tilt_params ?
_em_imaging.specimen_holder_type ?
#
_em_sample_support.id 1
_em_sample_support.specimen_id 1
_em_sample_support.details ?
_em_sample_support.grid_material COPPER
_em_sample_support.grid_mesh_size 300
_em_sample_support.grid_type 'Quantifoil R1.2/1.3'
_em_sample_support.method ?
_em_sample_support.film_material ?
#
_em_vitrification.id 1
_em_vitrification.specimen_id 1
_em_vitrification.chamber_temperature ?
_em_vitrification.cryogen_name NITROGEN
_em_vitrification.details ?
_em_vitrification.humidity ?
_em_vitrification.instrument 'HOMEMADE PLUNGER'
_em_vitrification.entry_id 6PO6
_em_vitrification.citation_id ?
_em_vitrification.method ?
_em_vitrification.temp ?
_em_vitrification.time_resolved_state ?
#
_em_experiment.entry_id 6PO6
_em_experiment.id 1
_em_experiment.aggregation_state '3D ARRAY'
_em_experiment.reconstruction_method CRYSTALLOGRAPHY
_em_experiment.entity_assembly_id 1
#
loop_
_pdbx_validate_rmsd_bond.id
_pdbx_validate_rmsd_bond.PDB_model_num
_pdbx_validate_rmsd_bond.auth_atom_id_1
_pdbx_validate_rmsd_bond.auth_asym_id_1
_pdbx_validate_rmsd_bond.auth_comp_id_1
_pdbx_validate_rmsd_bond.auth_seq_id_1
_pdbx_validate_rmsd_bond.PDB_ins_code_1
_pdbx_validate_rmsd_bond.label_alt_id_1
_pdbx_validate_rmsd_bond.auth_atom_id_2
_pdbx_validate_rmsd_bond.auth_asym_id_2
_pdbx_validate_rmsd_bond.auth_comp_id_2
_pdbx_validate_rmsd_bond.auth_seq_id_2
_pdbx_validate_rmsd_bond.PDB_ins_code_2
_pdbx_validate_rmsd_bond.label_alt_id_2
_pdbx_validate_rmsd_bond.bond_value
_pdbx_validate_rmsd_bond.bond_target_value
_pdbx_validate_rmsd_bond.bond_deviation
_pdbx_validate_rmsd_bond.bond_standard_deviation
_pdbx_validate_rmsd_bond.linker_flag
1 1 CA A VAL 1 ? ? CB A VAL 1 ? ? 1.307 1.543 -0.236 0.021 N
2 1 CG A PHE 2 ? ? CD2 A PHE 2 ? ? 1.239 1.383 -0.144 0.015 N
3 1 CD1 A PHE 2 ? ? CE1 A PHE 2 ? ? 1.530 1.388 0.142 0.020 N
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 CB A PHE 2 ? ? CG A PHE 2 ? ? CD1 A PHE 2 ? ? 114.26 120.80 -6.54 0.70 N
2 1 CG A PHE 2 ? ? CD1 A PHE 2 ? ? CE1 A PHE 2 ? ? 110.02 120.80 -10.78 1.10 N
3 1 CG A PHE 2 ? ? CD2 A PHE 2 ? ? CE2 A PHE 2 ? ? 129.58 120.80 8.78 1.10 N
4 1 CZ A PHE 2 ? ? CE2 A PHE 2 ? ? CD2 A PHE 2 ? ? 108.06 120.10 -12.04 1.20 N
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
ALA N N N N 1
ALA CA C N S 2
ALA C C N N 3
ALA O O N N 4
ALA CB C N N 5
ALA OXT O N N 6
ALA H H N N 7
ALA H2 H N N 8
ALA HA H N N 9
ALA HB1 H N N 10
ALA HB2 H N N 11
ALA HB3 H N N 12
ALA HXT H N N 13
HOH O O N N 14
HOH H1 H N N 15
HOH H2 H N N 16
OV7 N N N N 17
OV7 CA C N R 18
OV7 C C N N 19
OV7 SB2 S N N 20
OV7 OXT O N N 21
OV7 O O N N 22
OV7 CG3 C N N 23
OV7 CD C N N 24
OV7 OE1 O N N 25
OV7 OE2 O N N 26
OV7 H H N N 27
OV7 H2 H N N 28
OV7 HA H N N 29
OV7 HXT H N N 30
OV7 H6 H N N 31
OV7 H7 H N N 32
OV7 H8 H N N 33
PHE N N N N 34
PHE CA C N S 35
PHE C C N N 36
PHE O O N N 37
PHE CB C N N 38
PHE CG C Y N 39
PHE CD1 C Y N 40
PHE CD2 C Y N 41
PHE CE1 C Y N 42
PHE CE2 C Y N 43
PHE CZ C Y N 44
PHE OXT O N N 45
PHE H H N N 46
PHE H2 H N N 47
PHE HA H N N 48
PHE HB2 H N N 49
PHE HB3 H N N 50
PHE HD1 H N N 51
PHE HD2 H N N 52
PHE HE1 H N N 53
PHE HE2 H N N 54
PHE HZ H N N 55
PHE HXT H N N 56
VAL N N N N 57
VAL CA C N S 58
VAL C C N N 59
VAL O O N N 60
VAL CB C N N 61
VAL CG1 C N N 62
VAL CG2 C N N 63
VAL OXT O N N 64
VAL H H N N 65
VAL H2 H N N 66
VAL HA H N N 67
VAL HB H N N 68
VAL HG11 H N N 69
VAL HG12 H N N 70
VAL HG13 H N N 71
VAL HG21 H N N 72
VAL HG22 H N N 73
VAL HG23 H N N 74
VAL HXT H N N 75
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ALA N CA sing N N 1
ALA N H sing N N 2
ALA N H2 sing N N 3
ALA CA C sing N N 4
ALA CA CB sing N N 5
ALA CA HA sing N N 6
ALA C O doub N N 7
ALA C OXT sing N N 8
ALA CB HB1 sing N N 9
ALA CB HB2 sing N N 10
ALA CB HB3 sing N N 11
ALA OXT HXT sing N N 12
HOH O H1 sing N N 13
HOH O H2 sing N N 14
OV7 OE2 CD doub N N 15
OV7 CD CG3 sing N N 16
OV7 CD OE1 sing N N 17
OV7 CG3 SB2 sing N N 18
OV7 SB2 CA sing N N 19
OV7 O C doub N N 20
OV7 C CA sing N N 21
OV7 C OXT sing N N 22
OV7 CA N sing N N 23
OV7 N H sing N N 24
OV7 N H2 sing N N 25
OV7 CA HA sing N N 26
OV7 OXT HXT sing N N 27
OV7 CG3 H6 sing N N 28
OV7 CG3 H7 sing N N 29
OV7 OE1 H8 sing N N 30
PHE N CA sing N N 31
PHE N H sing N N 32
PHE N H2 sing N N 33
PHE CA C sing N N 34
PHE CA CB sing N N 35
PHE CA HA sing N N 36
PHE C O doub N N 37
PHE C OXT sing N N 38
PHE CB CG sing N N 39
PHE CB HB2 sing N N 40
PHE CB HB3 sing N N 41
PHE CG CD1 doub Y N 42
PHE CG CD2 sing Y N 43
PHE CD1 CE1 sing Y N 44
PHE CD1 HD1 sing N N 45
PHE CD2 CE2 doub Y N 46
PHE CD2 HD2 sing N N 47
PHE CE1 CZ doub Y N 48
PHE CE1 HE1 sing N N 49
PHE CE2 CZ sing Y N 50
PHE CE2 HE2 sing N N 51
PHE CZ HZ sing N N 52
PHE OXT HXT sing N N 53
VAL N CA sing N N 54
VAL N H sing N N 55
VAL N H2 sing N N 56
VAL CA C sing N N 57
VAL CA CB sing N N 58
VAL CA HA sing N N 59
VAL C O doub N N 60
VAL C OXT sing N N 61
VAL CB CG1 sing N N 62
VAL CB CG2 sing N N 63
VAL CB HB sing N N 64
VAL CG1 HG11 sing N N 65
VAL CG1 HG12 sing N N 66
VAL CG1 HG13 sing N N 67
VAL CG2 HG21 sing N N 68
VAL CG2 HG22 sing N N 69
VAL CG2 HG23 sing N N 70
VAL OXT HXT sing N N 71
#
_em_3d_crystal_entity.id 1
_em_3d_crystal_entity.image_processing_id 1
_em_3d_crystal_entity.angle_alpha 90
_em_3d_crystal_entity.angle_beta 94
_em_3d_crystal_entity.angle_gamma 90
_em_3d_crystal_entity.length_a 9.660
_em_3d_crystal_entity.length_b 9.580
_em_3d_crystal_entity.length_c 12.140
_em_3d_crystal_entity.space_group_name 4
_em_3d_crystal_entity.space_group_num 4
#
_em_ctf_correction.id 1
_em_ctf_correction.em_image_processing_id 1
_em_ctf_correction.type NONE
_em_ctf_correction.details ?
#
_em_diffraction.id 1
_em_diffraction.camera_length 1100
_em_diffraction.imaging_id 1
_em_diffraction.tilt_angle_list ?
#
_em_diffraction_shell.id 1
_em_diffraction_shell.em_diffraction_stats_id 1
_em_diffraction_shell.fourier_space_coverage 92.8
_em_diffraction_shell.high_resolution 0.9
_em_diffraction_shell.low_resolution 0.93
_em_diffraction_shell.multiplicity 2.25
_em_diffraction_shell.num_structure_factors 642
_em_diffraction_shell.phase_residual 15
#
_em_diffraction_stats.id 1
_em_diffraction_stats.details ?
_em_diffraction_stats.image_processing_id 1
_em_diffraction_stats.fourier_space_coverage 95.4
_em_diffraction_stats.high_resolution 0.9
_em_diffraction_stats.num_intensities_measured 7590
_em_diffraction_stats.num_structure_factors 3047
_em_diffraction_stats.overall_phase_error 0
_em_diffraction_stats.overall_phase_residual 15
_em_diffraction_stats.phase_error_rejection_criteria 0
_em_diffraction_stats.r_merge 23.5
_em_diffraction_stats.r_sym 23.5
#
_em_entity_assembly_naturalsource.id 1
_em_entity_assembly_naturalsource.entity_assembly_id 1
_em_entity_assembly_naturalsource.cell ?
_em_entity_assembly_naturalsource.cellular_location ?
_em_entity_assembly_naturalsource.ncbi_tax_id 317
_em_entity_assembly_naturalsource.organ ?
_em_entity_assembly_naturalsource.organelle ?
_em_entity_assembly_naturalsource.organism 'Pseudomonas syringae'
_em_entity_assembly_naturalsource.strain ?
_em_entity_assembly_naturalsource.tissue ?
#
_em_image_processing.id 1
_em_image_processing.image_recording_id 1
_em_image_processing.details ?
#
_em_image_recording.id 1
_em_image_recording.imaging_id 1
_em_image_recording.avg_electron_dose_per_image 0.01
_em_image_recording.average_exposure_time 1
_em_image_recording.details ?
_em_image_recording.detector_mode ?
_em_image_recording.film_or_detector_model 'FEI FALCON III (4k x 4k)'
_em_image_recording.num_diffraction_images ?
_em_image_recording.num_grids_imaged 1
_em_image_recording.num_real_images ?
#
loop_
_em_software.id
_em_software.category
_em_software.details
_em_software.name
_em_software.version
_em_software.image_processing_id
_em_software.fitting_id
_em_software.imaging_id
1 'IMAGE ACQUISITION' ? ? ? ? ? 1
2 MASKING ? ? ? ? ? ?
3 'CTF CORRECTION' ? ? ? 1 ? ?
4 'LAYERLINE INDEXING' ? ? ? ? ? ?
5 'DIFFRACTION INDEXING' ? ? ? ? ? ?
6 'MODEL FITTING' ? ? ? ? 1 ?
7 OTHER ? ? ? ? ? ?
8 'MOLECULAR REPLACEMENT' ? ? ? 1 ? ?
9 'LATTICE DISTORTION CORRECTION' ? ? ? 1 ? ?
10 'SYMMETRY DETERMINATION' ? ? ? 1 ? ?
11 'CRYSTALLOGRAPHY MERGING' ? ? ? 1 ? ?
12 RECONSTRUCTION ? ? ? 1 ? ?
13 'MODEL REFINEMENT' ? ? ? ? 1 ?
#
_em_specimen.id 1
_em_specimen.experiment_id 1
_em_specimen.concentration ?
_em_specimen.details ?
_em_specimen.embedding_applied NO
_em_specimen.shadowing_applied NO
_em_specimen.staining_applied NO
_em_specimen.vitrification_applied YES
#
loop_
_pdbx_audit_support.funding_organization
_pdbx_audit_support.country
_pdbx_audit_support.grant_number
_pdbx_audit_support.ordinal
'National Institutes of Health/National Human Genome Research Institute (NIH/NHGRI)' 'United States' 'R37 GM058822' 1
'National Institutes of Health/National Human Genome Research Institute (NIH/NHGRI)' 'United States' 'F32 GM129944' 2
'National Institutes of Health/National Human Genome Research Institute (NIH/NHGRI)' 'United States' 'F32 GM120868' 3
#
_pdbx_entity_nonpoly.entity_id 2
_pdbx_entity_nonpoly.name water
_pdbx_entity_nonpoly.comp_id HOH
#
_pdbx_struct_assembly_auth_evidence.id 1
_pdbx_struct_assembly_auth_evidence.assembly_id 1
_pdbx_struct_assembly_auth_evidence.experimental_support none
_pdbx_struct_assembly_auth_evidence.details ?
#
_space_group.crystal_system monoclinic
_space_group.name_H-M_alt 'P 1 21 1'
_space_group.IT_number 4
_space_group.name_Hall 'P 2yb'
_space_group.id 1
#