data_6M9I
#
_entry.id 6M9I
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.387
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 6M9I pdb_00006m9i 10.2210/pdb6m9i/pdb
WWPDB D_1000236316 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2019-03-27
2 'Structure model' 1 1 2019-12-04
3 'Structure model' 1 2 2024-03-13
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Author supporting evidence'
2 3 'Structure model' 'Data collection'
3 3 'Structure model' 'Database references'
4 3 'Structure model' 'Refinement description'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 2 'Structure model' pdbx_audit_support
2 3 'Structure model' chem_comp_atom
3 3 'Structure model' chem_comp_bond
4 3 'Structure model' database_2
5 3 'Structure model' diffrn_radiation_wavelength
6 3 'Structure model' refine
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 2 'Structure model' '_pdbx_audit_support.funding_organization'
2 3 'Structure model' '_database_2.pdbx_DOI'
3 3 'Structure model' '_database_2.pdbx_database_accession'
4 3 'Structure model' '_diffrn_radiation_wavelength.wavelength'
5 3 'Structure model' '_refine.ls_d_res_high'
6 3 'Structure model' '_refine.ls_d_res_low'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.entry_id 6M9I
_pdbx_database_status.recvd_initial_deposition_date 2018-08-23
_pdbx_database_status.SG_entry N
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_nmr_data ?
#
_pdbx_database_related.db_name PDB
_pdbx_database_related.details .
_pdbx_database_related.db_id 6EEX
_pdbx_database_related.content_type unspecified
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
_audit_author.identifier_ORCID
'Zee, C.' 1 ?
'Glynn, C.' 2 ?
'Gallagher-Jones, M.' 3 ?
'Miao, J.' 4 ?
'Santiago, C.G.' 5 ?
'Cascio, D.' 6 ?
'Gonen, T.' 7 ?
'Sawaya, M.R.' 8 ?
'Rodriguez, J.A.' 9 ?
#
_citation.abstract ?
_citation.abstract_id_CAS ?
_citation.book_id_ISBN ?
_citation.book_publisher ?
_citation.book_publisher_city ?
_citation.book_title ?
_citation.coordinate_linkage ?
_citation.country UK
_citation.database_id_Medline ?
_citation.details ?
_citation.id primary
_citation.journal_abbrev IUCrJ
_citation.journal_id_ASTM ?
_citation.journal_id_CSD ?
_citation.journal_id_ISSN 2052-2525
_citation.journal_full ?
_citation.journal_issue ?
_citation.journal_volume 6
_citation.language ?
_citation.page_first 197
_citation.page_last 205
_citation.title
'Homochiral and racemic MicroED structures of a peptide repeat from the ice-nucleation protein InaZ.'
_citation.year 2019
_citation.database_id_CSD ?
_citation.pdbx_database_id_DOI 10.1107/S2052252518017621
_citation.pdbx_database_id_PubMed 30867917
_citation.unpublished_flag ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Zee, C.T.' 1 ?
primary 'Glynn, C.' 2 0000-0002-2197-2357
primary 'Gallagher-Jones, M.' 3 0000-0003-4227-917X
primary 'Miao, J.' 4 0000-0001-5527-295X
primary 'Santiago, C.G.' 5 0000-0001-9675-5931
primary 'Cascio, D.' 6 ?
primary 'Gonen, T.' 7 0000-0003-3326-1242
primary 'Sawaya, M.R.' 8 0000-0003-0874-9043
primary 'Rodriguez, J.A.' 9 0000-0002-0248-4964
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn 'Ice nucleation protein' 522.508 1 ? ? 'UNP residues 707-712' L-GSTSTA
2 water nat water 18.015 1 ? ? ? ?
#
_entity_name_com.entity_id 1
_entity_name_com.name inaZ
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code GSTSTA
_entity_poly.pdbx_seq_one_letter_code_can GSTSTA
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
_pdbx_entity_nonpoly.entity_id 2
_pdbx_entity_nonpoly.name water
_pdbx_entity_nonpoly.comp_id HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 GLY n
1 2 SER n
1 3 THR n
1 4 SER n
1 5 THR n
1 6 ALA n
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num 1
_pdbx_entity_src_syn.pdbx_end_seq_num 6
_pdbx_entity_src_syn.organism_scientific 'Pseudomonas syringae pv. syringae'
_pdbx_entity_src_syn.organism_common_name ?
_pdbx_entity_src_syn.ncbi_taxonomy_id 321
_pdbx_entity_src_syn.details L-GSTSTA
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067
HOH non-polymer . WATER ? 'H2 O' 18.015
SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093
THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 GLY 1 707 707 GLY GLY A . n
A 1 2 SER 2 708 708 SER SER A . n
A 1 3 THR 3 709 709 THR THR A . n
A 1 4 SER 4 710 710 SER SER A . n
A 1 5 THR 5 711 711 THR THR A . n
A 1 6 ALA 6 712 712 ALA ALA A . n
#
_pdbx_nonpoly_scheme.asym_id B
_pdbx_nonpoly_scheme.entity_id 2
_pdbx_nonpoly_scheme.mon_id HOH
_pdbx_nonpoly_scheme.ndb_seq_num 1
_pdbx_nonpoly_scheme.pdb_seq_num 801
_pdbx_nonpoly_scheme.auth_seq_num 1
_pdbx_nonpoly_scheme.pdb_mon_id HOH
_pdbx_nonpoly_scheme.auth_mon_id HOH
_pdbx_nonpoly_scheme.pdb_strand_id A
_pdbx_nonpoly_scheme.pdb_ins_code .
#
loop_
_software.citation_id
_software.classification
_software.compiler_name
_software.compiler_version
_software.contact_author
_software.contact_author_email
_software.date
_software.description
_software.dependencies
_software.hardware
_software.language
_software.location
_software.mods
_software.name
_software.os
_software.os_version
_software.type
_software.version
_software.pdbx_ordinal
? 'data scaling' ? ? 'Wolfgang Kabsch' ? ? ? ? ? ?
http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? XSCALE ? ? package . 1
? refinement ? ? 'Paul D. Adams' PDAdams@lbl.gov ? ? ? ? C++ http://www.phenix-online.org/ ? PHENIX
? ? package 1.12_2829 2
? 'data extraction' ? ? PDB deposit@deposit.rcsb.org 'Sep. 1, 2017' ? ? ? C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/ ? PDB_EXTRACT ? ? package 3.24 3
? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? .
4
? phasing ? ? ? ? ? ? ? ? ? ? ? SHELXD ? ? ? .
5
#
_cell.angle_alpha 90.000
_cell.angle_alpha_esd ?
_cell.angle_beta 90.000
_cell.angle_beta_esd ?
_cell.angle_gamma 90.000
_cell.angle_gamma_esd ?
_cell.entry_id 6M9I
_cell.details ?
_cell.formula_units_Z ?
_cell.length_a 9.190
_cell.length_a_esd ?
_cell.length_b 11.890
_cell.length_b_esd ?
_cell.length_c 22.430
_cell.length_c_esd ?
_cell.volume ?
_cell.volume_esd ?
_cell.Z_PDB 4
_cell.reciprocal_angle_alpha ?
_cell.reciprocal_angle_beta ?
_cell.reciprocal_angle_gamma ?
_cell.reciprocal_angle_alpha_esd ?
_cell.reciprocal_angle_beta_esd ?
_cell.reciprocal_angle_gamma_esd ?
_cell.reciprocal_length_a ?
_cell.reciprocal_length_b ?
_cell.reciprocal_length_c ?
_cell.reciprocal_length_a_esd ?
_cell.reciprocal_length_b_esd ?
_cell.reciprocal_length_c_esd ?
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 6M9I
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 19
_symmetry.space_group_name_Hall ?
_symmetry.space_group_name_H-M 'P 21 21 21'
_symmetry.pdbx_full_space_group_name_H-M ?
#
_exptl.absorpt_coefficient_mu ?
_exptl.absorpt_correction_T_max ?
_exptl.absorpt_correction_T_min ?
_exptl.absorpt_correction_type ?
_exptl.absorpt_process_details ?
_exptl.entry_id 6M9I
_exptl.crystals_number ?
_exptl.details ?
_exptl.method 'ELECTRON CRYSTALLOGRAPHY'
_exptl.method_details ?
#
_exptl_crystal.colour ?
_exptl_crystal.density_diffrn ?
_exptl_crystal.density_Matthews ?
_exptl_crystal.density_method ?
_exptl_crystal.density_percent_sol ?
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.id 1
_exptl_crystal.preparation ?
_exptl_crystal.size_max ?
_exptl_crystal.size_mid ?
_exptl_crystal.size_min ?
_exptl_crystal.size_rad ?
_exptl_crystal.colour_lustre ?
_exptl_crystal.colour_modifier ?
_exptl_crystal.colour_primary ?
_exptl_crystal.density_meas ?
_exptl_crystal.density_meas_esd ?
_exptl_crystal.density_meas_gt ?
_exptl_crystal.density_meas_lt ?
_exptl_crystal.density_meas_temp ?
_exptl_crystal.density_meas_temp_esd ?
_exptl_crystal.density_meas_temp_gt ?
_exptl_crystal.density_meas_temp_lt ?
_exptl_crystal.pdbx_crystal_image_url ?
_exptl_crystal.pdbx_crystal_image_format ?
_exptl_crystal.pdbx_mosaicity ?
_exptl_crystal.pdbx_mosaicity_esd ?
#
_diffrn.ambient_environment ?
_diffrn.ambient_temp ?
_diffrn.ambient_temp_details ?
_diffrn.ambient_temp_esd ?
_diffrn.crystal_id 1
_diffrn.crystal_support ?
_diffrn.crystal_treatment ?
_diffrn.details ?
_diffrn.id 1
_diffrn.ambient_pressure ?
_diffrn.ambient_pressure_esd ?
_diffrn.ambient_pressure_gt ?
_diffrn.ambient_pressure_lt ?
_diffrn.ambient_temp_gt ?
_diffrn.ambient_temp_lt ?
_diffrn.pdbx_serial_crystal_experiment ?
#
_diffrn_detector.area_resol_mean ?
_diffrn_detector.details ?
_diffrn_detector.detector ?
_diffrn_detector.diffrn_id 1
_diffrn_detector.dtime ?
_diffrn_detector.pdbx_collection_date 2017-09-24
_diffrn_detector.pdbx_collection_time_total ?
_diffrn_detector.pdbx_frames_total ?
_diffrn_detector.pdbx_frequency ?
_diffrn_detector.type ?
#
_diffrn_radiation.collimation ?
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.filter_edge ?
_diffrn_radiation.inhomogeneity ?
_diffrn_radiation.monochromator ?
_diffrn_radiation.polarisn_norm ?
_diffrn_radiation.polarisn_ratio ?
_diffrn_radiation.probe ?
_diffrn_radiation.type ?
_diffrn_radiation.xray_symbol ?
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l ?
_diffrn_radiation.pdbx_wavelength_list ?
_diffrn_radiation.pdbx_wavelength ?
_diffrn_radiation.pdbx_diffrn_protocol ?
_diffrn_radiation.pdbx_analyzer ?
_diffrn_radiation.pdbx_scattering_type electron
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength .
_diffrn_radiation_wavelength.wt 1.0
#
_reflns.B_iso_Wilson_estimate 42.620
_reflns.entry_id 6M9I
_reflns.data_reduction_details ?
_reflns.data_reduction_method ?
_reflns.d_resolution_high 0.900
_reflns.d_resolution_low 7.271
_reflns.details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.number_all ?
_reflns.number_obs 1760
_reflns.observed_criterion ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.observed_criterion_I_max ?
_reflns.observed_criterion_I_min ?
_reflns.observed_criterion_sigma_F ?
_reflns.observed_criterion_sigma_I ?
_reflns.percent_possible_obs 85.500
_reflns.R_free_details ?
_reflns.Rmerge_F_all ?
_reflns.Rmerge_F_obs ?
_reflns.Friedel_coverage ?
_reflns.number_gt ?
_reflns.threshold_expression ?
_reflns.pdbx_redundancy 4.269
_reflns.pdbx_Rmerge_I_obs 0.162
_reflns.pdbx_Rmerge_I_all ?
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_av_sigmaI ?
_reflns.pdbx_netI_over_sigmaI 5.500
_reflns.pdbx_res_netI_over_av_sigmaI_2 ?
_reflns.pdbx_res_netI_over_sigmaI_2 ?
_reflns.pdbx_chi_squared 0.962
_reflns.pdbx_scaling_rejects 1
_reflns.pdbx_d_res_high_opt ?
_reflns.pdbx_d_res_low_opt ?
_reflns.pdbx_d_res_opt_method ?
_reflns.phase_calculation_details ?
_reflns.pdbx_Rrim_I_all 0.185
_reflns.pdbx_Rpim_I_all ?
_reflns.pdbx_d_opt ?
_reflns.pdbx_number_measured_all 7513
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
_reflns.pdbx_CC_half 0.990
_reflns.pdbx_R_split ?
#
loop_
_reflns_shell.d_res_high
_reflns_shell.d_res_low
_reflns_shell.meanI_over_sigI_all
_reflns_shell.meanI_over_sigI_obs
_reflns_shell.number_measured_all
_reflns_shell.number_measured_obs
_reflns_shell.number_possible
_reflns_shell.number_unique_all
_reflns_shell.number_unique_obs
_reflns_shell.percent_possible_all
_reflns_shell.percent_possible_obs
_reflns_shell.Rmerge_F_all
_reflns_shell.Rmerge_F_obs
_reflns_shell.Rmerge_I_all
_reflns_shell.Rmerge_I_obs
_reflns_shell.meanI_over_sigI_gt
_reflns_shell.meanI_over_uI_all
_reflns_shell.meanI_over_uI_gt
_reflns_shell.number_measured_gt
_reflns_shell.number_unique_gt
_reflns_shell.percent_possible_gt
_reflns_shell.Rmerge_F_gt
_reflns_shell.Rmerge_I_gt
_reflns_shell.pdbx_redundancy
_reflns_shell.pdbx_Rsym_value
_reflns_shell.pdbx_chi_squared
_reflns_shell.pdbx_netI_over_sigmaI_all
_reflns_shell.pdbx_netI_over_sigmaI_obs
_reflns_shell.pdbx_Rrim_I_all
_reflns_shell.pdbx_Rpim_I_all
_reflns_shell.pdbx_rejects
_reflns_shell.pdbx_ordinal
_reflns_shell.pdbx_diffrn_id
_reflns_shell.pdbx_CC_half
_reflns_shell.pdbx_R_split
0.900 1.000 ? 3.090 ? 1901 540 ? 452 83.700 ? ? ? ? 0.357 ? ? ? ? ? ? ? ? 4.206 ? ? ? ? 0.409 ? ? 1 1 0.726 ?
1.000 1.100 ? 4.420 ? 1395 354 ? 312 88.100 ? ? ? ? 0.223 ? ? ? ? ? ? ? ? 4.471 ? ? ? ? 0.252 ? ? 2 1 0.969 ?
1.100 1.200 ? 5.340 ? 999 253 ? 221 87.400 ? ? ? ? 0.218 ? ? ? ? ? ? ? ? 4.520 ? ? ? ? 0.246 ? ? 3 1 0.944 ?
1.200 1.300 ? 6.160 ? 719 180 ? 158 87.800 ? ? ? ? 0.203 ? ? ? ? ? ? ? ? 4.551 ? ? ? ? 0.230 ? ? 4 1 0.958 ?
1.300 1.500 ? 6.300 ? 924 247 ? 218 88.300 ? ? ? ? 0.194 ? ? ? ? ? ? ? ? 4.239 ? ? ? ? 0.222 ? ? 5 1 0.950 ?
1.500 1.800 ? 7.580 ? 683 188 ? 164 87.200 ? ? ? ? 0.159 ? ? ? ? ? ? ? ? 4.165 ? ? ? ? 0.181 ? ? 6 1 0.974 ?
1.800 2.300 ? 8.960 ? 477 145 ? 120 82.800 ? ? ? ? 0.105 ? ? ? ? ? ? ? ? 3.975 ? ? ? ? 0.122 ? ? 7 1 0.989 ?
2.300 3.000 ? 9.030 ? 247 78 ? 66 84.600 ? ? ? ? 0.105 ? ? ? ? ? ? ? ? 3.742 ? ? ? ? 0.122 ? ? 8 1 0.986 ?
3.000 5.000 ? 9.620 ? 140 53 ? 40 75.500 ? ? ? ? 0.082 ? ? ? ? ? ? ? ? 3.500 ? ? ? ? 0.092 ? ? 9 1 0.992 ?
5.000 7.271 ? 9.030 ? 28 20 ? 9 45.000 ? ? ? ? 0.106 ? ? ? ? ? ? ? ? 3.111 ? ? ? ? 0.126 ? ? 10 1 0.997 ?
#
_refine.aniso_B[1][1] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[2][3] ?
_refine.aniso_B[3][3] ?
_refine.B_iso_max 3.940
_refine.B_iso_mean 1.1690
_refine.B_iso_min 0.130
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.details ?
_refine.diff_density_max ?
_refine.diff_density_max_esd ?
_refine.diff_density_min ?
_refine.diff_density_min_esd ?
_refine.diff_density_rms ?
_refine.diff_density_rms_esd ?
_refine.entry_id 6M9I
_refine.pdbx_refine_id 'ELECTRON CRYSTALLOGRAPHY'
_refine.ls_abs_structure_details ?
_refine.ls_abs_structure_Flack ?
_refine.ls_abs_structure_Flack_esd ?
_refine.ls_abs_structure_Rogers ?
_refine.ls_abs_structure_Rogers_esd ?
_refine.ls_d_res_high 0.9
_refine.ls_d_res_low 0.9
_refine.ls_extinction_coef ?
_refine.ls_extinction_coef_esd ?
_refine.ls_extinction_expression ?
_refine.ls_extinction_method ?
_refine.ls_goodness_of_fit_all ?
_refine.ls_goodness_of_fit_all_esd ?
_refine.ls_goodness_of_fit_obs ?
_refine.ls_goodness_of_fit_obs_esd ?
_refine.ls_hydrogen_treatment ?
_refine.ls_matrix_type ?
_refine.ls_number_constraints ?
_refine.ls_number_parameters ?
_refine.ls_number_reflns_all ?
_refine.ls_number_reflns_obs 1747
_refine.ls_number_reflns_R_free 173
_refine.ls_number_reflns_R_work ?
_refine.ls_number_restraints ?
_refine.ls_percent_reflns_obs 86.6100
_refine.ls_percent_reflns_R_free 9.9000
_refine.ls_R_factor_all ?
_refine.ls_R_factor_obs 0.2188
_refine.ls_R_factor_R_free 0.2324
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_R_factor_R_work 0.2173
_refine.ls_R_Fsqd_factor_obs ?
_refine.ls_R_I_factor_obs ?
_refine.ls_redundancy_reflns_all ?
_refine.ls_redundancy_reflns_obs ?
_refine.ls_restrained_S_all ?
_refine.ls_restrained_S_obs ?
_refine.ls_shift_over_esd_max ?
_refine.ls_shift_over_esd_mean ?
_refine.ls_structure_factor_coef ?
_refine.ls_weighting_details ?
_refine.ls_weighting_scheme ?
_refine.ls_wR_factor_all ?
_refine.ls_wR_factor_obs ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.occupancy_max ?
_refine.occupancy_min ?
_refine.solvent_model_details ?
_refine.solvent_model_param_bsol ?
_refine.solvent_model_param_ksol ?
_refine.ls_R_factor_gt ?
_refine.ls_goodness_of_fit_gt ?
_refine.ls_goodness_of_fit_ref ?
_refine.ls_shift_over_su_max ?
_refine.ls_shift_over_su_max_lt ?
_refine.ls_shift_over_su_mean ?
_refine.ls_shift_over_su_mean_lt ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 1.450
_refine.pdbx_ls_sigma_Fsqd ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.pdbx_method_to_determine_struct ?
_refine.pdbx_starting_model ?
_refine.pdbx_stereochemistry_target_values ?
_refine.pdbx_R_Free_selection_details ?
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.pdbx_solvent_vdw_probe_radii 1.1100
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii 0.9000
_refine.pdbx_real_space_R ?
_refine.pdbx_density_correlation ?
_refine.pdbx_pd_number_of_powder_patterns ?
_refine.pdbx_pd_number_of_points ?
_refine.pdbx_pd_meas_number_of_points ?
_refine.pdbx_pd_proc_ls_prof_R_factor ?
_refine.pdbx_pd_proc_ls_prof_wR_factor ?
_refine.pdbx_pd_Marquardt_correlation_coeff ?
_refine.pdbx_pd_Fsqrd_R_factor ?
_refine.pdbx_pd_ls_matrix_band_width ?
_refine.pdbx_overall_phase_error 20.6700
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_diffrn_id 1
_refine.overall_SU_B ?
_refine.overall_SU_ML 0.0500
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_average_fsc_overall ?
_refine.pdbx_average_fsc_work ?
_refine.pdbx_average_fsc_free ?
#
_refine_hist.cycle_id final
_refine_hist.pdbx_refine_id 'ELECTRON CRYSTALLOGRAPHY'
_refine_hist.d_res_high 0.9020
_refine_hist.d_res_low 7.2710
_refine_hist.pdbx_number_atoms_ligand 0
_refine_hist.number_atoms_solvent 1
_refine_hist.number_atoms_total 37
_refine_hist.pdbx_number_residues_total 6
_refine_hist.pdbx_B_iso_mean_solvent 3.28
_refine_hist.pdbx_number_atoms_protein 36
_refine_hist.pdbx_number_atoms_nucleic_acid 0
#
loop_
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.criterion
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.number
_refine_ls_restr.rejects
_refine_ls_restr.type
_refine_ls_restr.weight
_refine_ls_restr.pdbx_restraint_function
'ELECTRON CRYSTALLOGRAPHY' ? 0.009 ? 35 ? f_bond_d ? ?
'ELECTRON CRYSTALLOGRAPHY' ? 1.057 ? 47 ? f_angle_d ? ?
'ELECTRON CRYSTALLOGRAPHY' ? 0.037 ? 7 ? f_chiral_restr ? ?
'ELECTRON CRYSTALLOGRAPHY' ? 0.004 ? 6 ? f_plane_restr ? ?
'ELECTRON CRYSTALLOGRAPHY' ? 7.542 ? 10 ? f_dihedral_angle_d ? ?
#
loop_
_refine_ls_shell.pdbx_refine_id
_refine_ls_shell.d_res_high
_refine_ls_shell.d_res_low
_refine_ls_shell.number_reflns_all
_refine_ls_shell.number_reflns_obs
_refine_ls_shell.number_reflns_R_free
_refine_ls_shell.number_reflns_R_work
_refine_ls_shell.percent_reflns_obs
_refine_ls_shell.percent_reflns_R_free
_refine_ls_shell.R_factor_all
_refine_ls_shell.R_factor_obs
_refine_ls_shell.R_factor_R_free
_refine_ls_shell.R_factor_R_free_error
_refine_ls_shell.R_factor_R_work
_refine_ls_shell.redundancy_reflns_all
_refine_ls_shell.redundancy_reflns_obs
_refine_ls_shell.wR_factor_all
_refine_ls_shell.wR_factor_obs
_refine_ls_shell.wR_factor_R_free
_refine_ls_shell.wR_factor_R_work
_refine_ls_shell.pdbx_total_number_of_bins_used
_refine_ls_shell.pdbx_phase_error
_refine_ls_shell.pdbx_fsc_work
_refine_ls_shell.pdbx_fsc_free
'ELECTRON CRYSTALLOGRAPHY' 0.9022 0.9432 206 . 20 186 82.0000 . . . 0.2866 0.0000 0.3049 . . . . . . 8 . . .
'ELECTRON CRYSTALLOGRAPHY' 0.9432 0.9928 216 . 22 194 90.0000 . . . 0.3740 0.0000 0.2927 . . . . . . 8 . . .
'ELECTRON CRYSTALLOGRAPHY' 0.9928 1.0548 210 . 20 190 87.0000 . . . 0.2908 0.0000 0.2306 . . . . . . 8 . . .
'ELECTRON CRYSTALLOGRAPHY' 1.0548 1.1360 216 . 22 194 89.0000 . . . 0.3107 0.0000 0.2262 . . . . . . 8 . . .
'ELECTRON CRYSTALLOGRAPHY' 1.1360 1.2498 218 . 22 196 87.0000 . . . 0.2244 0.0000 0.2285 . . . . . . 8 . . .
'ELECTRON CRYSTALLOGRAPHY' 1.2498 1.4295 220 . 22 198 88.0000 . . . 0.1737 0.0000 0.1965 . . . . . . 8 . . .
'ELECTRON CRYSTALLOGRAPHY' 1.4295 1.7965 229 . 23 206 88.0000 . . . 0.2374 0.0000 0.1991 . . . . . . 8 . . .
'ELECTRON CRYSTALLOGRAPHY' 1.7965 7.2715 232 . 22 210 83.0000 . . . 0.1731 0.0000 0.1877 . . . . . . 8 . . .
#
_struct.entry_id 6M9I
_struct.title 'L-GSTSTA from degenerate octameric repeats in InaZ, residues 707-712'
_struct.pdbx_model_details ?
_struct.pdbx_formula_weight ?
_struct.pdbx_formula_weight_method ?
_struct.pdbx_model_type_details ?
_struct.pdbx_CASP_flag N
#
_struct_keywords.entry_id 6M9I
_struct_keywords.text 'amyloid, racemic, ice nucleation, MicroED, InaZ, pseudomonas syringae, PROTEIN FIBRIL'
_struct_keywords.pdbx_keywords 'PROTEIN FIBRIL'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
#
_struct_ref.id 1
_struct_ref.db_name UNP
_struct_ref.db_code ICEN_PSESY
_struct_ref.pdbx_db_accession P06620
_struct_ref.pdbx_db_isoform ?
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code GSTSTA
_struct_ref.pdbx_align_begin 707
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 6M9I
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 6
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession P06620
_struct_ref_seq.db_align_beg 707
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 712
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 707
_struct_ref_seq.pdbx_auth_seq_align_end 712
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details monomeric
_pdbx_struct_assembly.oligomeric_count 1
#
loop_
_pdbx_struct_assembly_prop.biol_id
_pdbx_struct_assembly_prop.type
_pdbx_struct_assembly_prop.value
_pdbx_struct_assembly_prop.details
1 'ABSA (A^2)' 0 ?
1 MORE 0 ?
1 'SSA (A^2)' 770 ?
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B
#
_pdbx_struct_assembly_auth_evidence.id 1
_pdbx_struct_assembly_auth_evidence.assembly_id 1
_pdbx_struct_assembly_auth_evidence.experimental_support none
_pdbx_struct_assembly_auth_evidence.details ?
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
_em_3d_fitting.entry_id 6M9I
_em_3d_fitting.id 1
_em_3d_fitting.details ?
_em_3d_fitting.overall_b_value ?
_em_3d_fitting.ref_protocol 'AB INITIO MODEL'
_em_3d_fitting.ref_space RECIPROCAL
_em_3d_fitting.target_criteria 'maximum likelihood'
_em_3d_fitting.method ?
#
_em_3d_reconstruction.entry_id 6M9I
_em_3d_reconstruction.id 1
_em_3d_reconstruction.algorithm ?
_em_3d_reconstruction.details ?
_em_3d_reconstruction.refinement_type ?
_em_3d_reconstruction.image_processing_id 1
_em_3d_reconstruction.num_class_averages ?
_em_3d_reconstruction.num_particles ?
_em_3d_reconstruction.resolution 0.9
_em_3d_reconstruction.resolution_method 'DIFFRACTION PATTERN/LAYERLINES'
_em_3d_reconstruction.symmetry_type '3D CRYSTAL'
_em_3d_reconstruction.method ?
_em_3d_reconstruction.nominal_pixel_size ?
_em_3d_reconstruction.actual_pixel_size ?
_em_3d_reconstruction.magnification_calibration ?
#
_em_buffer.id 1
_em_buffer.details ?
_em_buffer.pH 4.2
_em_buffer.specimen_id 1
_em_buffer.name ?
#
_em_entity_assembly.id 1
_em_entity_assembly.parent_id 0
_em_entity_assembly.details ?
_em_entity_assembly.name 'L-GSTSTA from ice nucleation protein inaZ'
_em_entity_assembly.source NATURAL
_em_entity_assembly.type COMPLEX
_em_entity_assembly.entity_id_list 1
_em_entity_assembly.synonym ?
_em_entity_assembly.oligomeric_details ?
#
_em_imaging.id 1
_em_imaging.entry_id 6M9I
_em_imaging.accelerating_voltage 200
_em_imaging.alignment_procedure ?
_em_imaging.c2_aperture_diameter ?
_em_imaging.calibrated_defocus_max ?
_em_imaging.calibrated_defocus_min ?
_em_imaging.calibrated_magnification ?
_em_imaging.cryogen ?
_em_imaging.details ?
_em_imaging.electron_source 'FIELD EMISSION GUN'
_em_imaging.illumination_mode 'FLOOD BEAM'
_em_imaging.microscope_model 'FEI TECNAI F20'
_em_imaging.mode DIFFRACTION
_em_imaging.nominal_cs ?
_em_imaging.nominal_defocus_max ?
_em_imaging.nominal_defocus_min ?
_em_imaging.nominal_magnification ?
_em_imaging.recording_temperature_maximum ?
_em_imaging.recording_temperature_minimum ?
_em_imaging.residual_tilt ?
_em_imaging.specimen_holder_model ?
_em_imaging.specimen_id 1
_em_imaging.citation_id ?
_em_imaging.date ?
_em_imaging.temperature ?
_em_imaging.tilt_angle_min ?
_em_imaging.tilt_angle_max ?
_em_imaging.astigmatism ?
_em_imaging.detector_distance ?
_em_imaging.electron_beam_tilt_params ?
_em_imaging.specimen_holder_type ?
#
_em_sample_support.citation_id ?
_em_sample_support.details unspecified
_em_sample_support.film_material ?
_em_sample_support.grid_material ?
_em_sample_support.grid_mesh_size ?
_em_sample_support.grid_type ?
_em_sample_support.id 1
_em_sample_support.method ?
_em_sample_support.specimen_id 1
#
_em_vitrification.id 1
_em_vitrification.specimen_id 1
_em_vitrification.chamber_temperature ?
_em_vitrification.cryogen_name ETHANE
_em_vitrification.details ?
_em_vitrification.humidity ?
_em_vitrification.instrument ?
_em_vitrification.entry_id 6M9I
_em_vitrification.citation_id ?
_em_vitrification.method ?
_em_vitrification.temp ?
_em_vitrification.time_resolved_state ?
#
_em_experiment.entry_id 6M9I
_em_experiment.id 1
_em_experiment.aggregation_state '3D ARRAY'
_em_experiment.reconstruction_method CRYSTALLOGRAPHY
_em_experiment.entity_assembly_id 1
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
ALA N N N N 1
ALA CA C N S 2
ALA C C N N 3
ALA O O N N 4
ALA CB C N N 5
ALA OXT O N N 6
ALA H H N N 7
ALA H2 H N N 8
ALA HA H N N 9
ALA HB1 H N N 10
ALA HB2 H N N 11
ALA HB3 H N N 12
ALA HXT H N N 13
GLY N N N N 14
GLY CA C N N 15
GLY C C N N 16
GLY O O N N 17
GLY OXT O N N 18
GLY H H N N 19
GLY H2 H N N 20
GLY HA2 H N N 21
GLY HA3 H N N 22
GLY HXT H N N 23
HOH O O N N 24
HOH H1 H N N 25
HOH H2 H N N 26
SER N N N N 27
SER CA C N S 28
SER C C N N 29
SER O O N N 30
SER CB C N N 31
SER OG O N N 32
SER OXT O N N 33
SER H H N N 34
SER H2 H N N 35
SER HA H N N 36
SER HB2 H N N 37
SER HB3 H N N 38
SER HG H N N 39
SER HXT H N N 40
THR N N N N 41
THR CA C N S 42
THR C C N N 43
THR O O N N 44
THR CB C N R 45
THR OG1 O N N 46
THR CG2 C N N 47
THR OXT O N N 48
THR H H N N 49
THR H2 H N N 50
THR HA H N N 51
THR HB H N N 52
THR HG1 H N N 53
THR HG21 H N N 54
THR HG22 H N N 55
THR HG23 H N N 56
THR HXT H N N 57
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ALA N CA sing N N 1
ALA N H sing N N 2
ALA N H2 sing N N 3
ALA CA C sing N N 4
ALA CA CB sing N N 5
ALA CA HA sing N N 6
ALA C O doub N N 7
ALA C OXT sing N N 8
ALA CB HB1 sing N N 9
ALA CB HB2 sing N N 10
ALA CB HB3 sing N N 11
ALA OXT HXT sing N N 12
GLY N CA sing N N 13
GLY N H sing N N 14
GLY N H2 sing N N 15
GLY CA C sing N N 16
GLY CA HA2 sing N N 17
GLY CA HA3 sing N N 18
GLY C O doub N N 19
GLY C OXT sing N N 20
GLY OXT HXT sing N N 21
HOH O H1 sing N N 22
HOH O H2 sing N N 23
SER N CA sing N N 24
SER N H sing N N 25
SER N H2 sing N N 26
SER CA C sing N N 27
SER CA CB sing N N 28
SER CA HA sing N N 29
SER C O doub N N 30
SER C OXT sing N N 31
SER CB OG sing N N 32
SER CB HB2 sing N N 33
SER CB HB3 sing N N 34
SER OG HG sing N N 35
SER OXT HXT sing N N 36
THR N CA sing N N 37
THR N H sing N N 38
THR N H2 sing N N 39
THR CA C sing N N 40
THR CA CB sing N N 41
THR CA HA sing N N 42
THR C O doub N N 43
THR C OXT sing N N 44
THR CB OG1 sing N N 45
THR CB CG2 sing N N 46
THR CB HB sing N N 47
THR OG1 HG1 sing N N 48
THR CG2 HG21 sing N N 49
THR CG2 HG22 sing N N 50
THR CG2 HG23 sing N N 51
THR OXT HXT sing N N 52
#
_em_3d_crystal_entity.id 1
_em_3d_crystal_entity.image_processing_id 1
_em_3d_crystal_entity.angle_alpha 90
_em_3d_crystal_entity.angle_beta 90
_em_3d_crystal_entity.angle_gamma 90
_em_3d_crystal_entity.length_a 9.19
_em_3d_crystal_entity.length_b 11.89
_em_3d_crystal_entity.length_c 22.43
_em_3d_crystal_entity.space_group_name 'P 21 21 21'
_em_3d_crystal_entity.space_group_num 19
#
_em_crystal_formation.id 1
_em_crystal_formation.specimen_id 1
_em_crystal_formation.atmosphere ?
_em_crystal_formation.details 'Batch Mode: 0.1 M McIlvaine, pH 4.2, 12.5% w/v PEG8000, 0.1 M sodium chloride'
_em_crystal_formation.instrument ?
_em_crystal_formation.lipid_mixture ?
_em_crystal_formation.lipid_protein_ratio ?
_em_crystal_formation.temperature 298
_em_crystal_formation.time ?
_em_crystal_formation.time_unit ?
#
_em_ctf_correction.id 1
_em_ctf_correction.em_image_processing_id 1
_em_ctf_correction.type NONE
_em_ctf_correction.details ?
#
_em_diffraction.id 1
_em_diffraction.camera_length 1156
_em_diffraction.imaging_id 1
_em_diffraction.tilt_angle_list ?
#
_em_diffraction_shell.id 1
_em_diffraction_shell.em_diffraction_stats_id 1
_em_diffraction_shell.fourier_space_coverage 86.4
_em_diffraction_shell.high_resolution 7.27
_em_diffraction_shell.low_resolution 0.9
_em_diffraction_shell.multiplicity 4.3
_em_diffraction_shell.num_structure_factors 1747
_em_diffraction_shell.phase_residual 0.0000000001
#
_em_diffraction_stats.id 1
_em_diffraction_stats.details
;Phase statistics are not applicable. No imaging was used. The phases were obtained using a crystallographic direct methods program, SHELXD.
;
_em_diffraction_stats.image_processing_id 1
_em_diffraction_stats.fourier_space_coverage 86.4
_em_diffraction_stats.high_resolution 0.9
_em_diffraction_stats.num_intensities_measured 7494
_em_diffraction_stats.num_structure_factors 1750
_em_diffraction_stats.overall_phase_error 0
_em_diffraction_stats.overall_phase_residual 0.0000000001
_em_diffraction_stats.phase_error_rejection_criteria 'not applicable'
_em_diffraction_stats.r_merge 16.2
_em_diffraction_stats.r_sym 16.2
#
_em_entity_assembly_naturalsource.cellular_location ?
_em_entity_assembly_naturalsource.entity_assembly_id 1
_em_entity_assembly_naturalsource.id 1
_em_entity_assembly_naturalsource.ncbi_tax_id 321
_em_entity_assembly_naturalsource.organ ?
_em_entity_assembly_naturalsource.organelle ?
_em_entity_assembly_naturalsource.organism 'Pseudomonas syringae pv. syringae'
_em_entity_assembly_naturalsource.strain ?
_em_entity_assembly_naturalsource.tissue ?
_em_entity_assembly_naturalsource.cell ?
#
_em_image_processing.id 1
_em_image_processing.image_recording_id 1
_em_image_processing.details ?
#
_em_image_recording.id 1
_em_image_recording.imaging_id 1
_em_image_recording.avg_electron_dose_per_image 0.01
_em_image_recording.average_exposure_time ?
_em_image_recording.details ?
_em_image_recording.detector_mode ?
_em_image_recording.film_or_detector_model 'TVIPS TEMCAM-F416 (4k x 4k)'
_em_image_recording.num_diffraction_images ?
_em_image_recording.num_grids_imaged ?
_em_image_recording.num_real_images ?
#
_em_imaging_optics.id 1
_em_imaging_optics.imaging_id 1
_em_imaging_optics.chr_aberration_corrector ?
_em_imaging_optics.energyfilter_lower ?
_em_imaging_optics.energyfilter_name ?
_em_imaging_optics.energyfilter_upper ?
_em_imaging_optics.energyfilter_slit_width ?
_em_imaging_optics.phase_plate ?
_em_imaging_optics.sph_aberration_corrector ?
#
loop_
_em_software.id
_em_software.category
_em_software.details
_em_software.name
_em_software.version
_em_software.image_processing_id
_em_software.fitting_id
_em_software.imaging_id
1 'IMAGE ACQUISITION' ? ? ? ? ? 1
2 MASKING ? ? ? ? ? ?
3 'CTF CORRECTION' ? ? ? 1 ? ?
4 'LAYERLINE INDEXING' ? ? ? ? ? ?
5 'DIFFRACTION INDEXING' ? ? ? ? ? ?
6 'MODEL FITTING' ? Coot 0.8.9.1 ? 1 ?
7 OTHER ? ? ? ? ? ?
8 'MODEL REFINEMENT' ? PHENIX 1.12_2829 ? 1 ?
9 'MOLECULAR REPLACEMENT' ? ? ? 1 ? ?
10 'LATTICE DISTORTION CORRECTION' ? ? ? 1 ? ?
11 'SYMMETRY DETERMINATION' ? ? ? 1 ? ?
12 'CRYSTALLOGRAPHY MERGING' ? XSCALE ? 1 ? ?
13 RECONSTRUCTION ? SHELXD ? 1 ? ?
#
_em_specimen.id 1
_em_specimen.experiment_id 1
_em_specimen.concentration ?
_em_specimen.details ?
_em_specimen.embedding_applied NO
_em_specimen.shadowing_applied NO
_em_specimen.staining_applied NO
_em_specimen.vitrification_applied YES
#
loop_
_pdbx_audit_support.funding_organization
_pdbx_audit_support.country
_pdbx_audit_support.grant_number
_pdbx_audit_support.ordinal
'Department of Energy (DOE, United States)' 'United States' DE-FC02-02ER63421 1
'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' 'P41 GM103403' 2
#
_atom_sites.entry_id 6M9I
_atom_sites.fract_transf_matrix[1][1] 0.108814
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.084104
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.044583
_atom_sites.fract_transf_vector[1] 0.000000
_atom_sites.fract_transf_vector[2] 0.000000
_atom_sites.fract_transf_vector[3] 0.000000
#
loop_
_atom_type.symbol
C
H
N
O
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 N N . GLY A 1 1 ? 3.159 1.988 -9.348 1.00 1.36 ? 707 GLY A N 1
ATOM 2 C CA . GLY A 1 1 ? 3.551 2.786 -8.206 1.00 0.36 ? 707 GLY A CA 1
ATOM 3 C C . GLY A 1 1 ? 2.922 2.280 -6.940 1.00 0.13 ? 707 GLY A C 1
ATOM 4 O O . GLY A 1 1 ? 1.785 1.805 -6.933 1.00 0.55 ? 707 GLY A O 1
ATOM 5 H HA2 . GLY A 1 1 ? 4.515 2.761 -8.106 1.00 0.44 ? 707 GLY A HA2 1
ATOM 6 H HA3 . GLY A 1 1 ? 3.277 3.707 -8.342 1.00 0.44 ? 707 GLY A HA3 1
ATOM 7 N N . SER A 1 2 ? 3.657 2.389 -5.845 1.00 0.14 ? 708 SER A N 1
ATOM 8 C CA . SER A 1 2 ? 3.087 2.071 -4.554 1.00 0.34 ? 708 SER A CA 1
ATOM 9 C C . SER A 1 2 ? 3.722 2.972 -3.515 1.00 0.84 ? 708 SER A C 1
ATOM 10 O O . SER A 1 2 ? 4.897 3.331 -3.616 1.00 0.83 ? 708 SER A O 1
ATOM 11 C CB . SER A 1 2 ? 3.288 0.598 -4.192 1.00 1.22 ? 708 SER A CB 1
ATOM 12 O OG . SER A 1 2 ? 4.664 0.280 -4.024 1.00 2.01 ? 708 SER A OG 1
ATOM 13 H H . SER A 1 2 ? 4.479 2.642 -5.824 1.00 0.18 ? 708 SER A H 1
ATOM 14 H HA . SER A 1 2 ? 2.134 2.252 -4.572 1.00 0.42 ? 708 SER A HA 1
ATOM 15 H HB2 . SER A 1 2 ? 2.821 0.413 -3.363 1.00 1.47 ? 708 SER A HB2 1
ATOM 16 H HB3 . SER A 1 2 ? 2.925 0.048 -4.904 1.00 1.47 ? 708 SER A HB3 1
ATOM 17 H HG . SER A 1 2 ? 4.993 0.747 -3.409 1.00 2.43 ? 708 SER A HG 1
ATOM 18 N N . THR A 1 3 ? 2.927 3.347 -2.522 1.00 0.60 ? 709 THR A N 1
ATOM 19 C CA . THR A 1 3 ? 3.435 4.070 -1.371 1.00 0.57 ? 709 THR A CA 1
ATOM 20 C C . THR A 1 3 ? 2.700 3.564 -0.151 1.00 0.43 ? 709 THR A C 1
ATOM 21 O O . THR A 1 3 ? 1.470 3.563 -0.119 1.00 0.37 ? 709 THR A O 1
ATOM 22 C CB . THR A 1 3 ? 3.199 5.576 -1.493 1.00 0.96 ? 709 THR A CB 1
ATOM 23 O OG1 . THR A 1 3 ? 3.913 6.082 -2.623 1.00 1.06 ? 709 THR A OG1 1
ATOM 24 C CG2 . THR A 1 3 ? 3.671 6.285 -0.222 1.00 0.84 ? 709 THR A CG2 1
ATOM 25 H H . THR A 1 3 ? 2.081 3.193 -2.493 1.00 0.73 ? 709 THR A H 1
ATOM 26 H HA . THR A 1 3 ? 4.385 3.903 -1.263 1.00 0.70 ? 709 THR A HA 1
ATOM 27 H HB . THR A 1 3 ? 2.251 5.747 -1.607 1.00 1.17 ? 709 THR A HB 1
ATOM 28 H HG1 . THR A 1 3 ? 3.788 6.909 -2.696 1.00 1.29 ? 709 THR A HG1 1
ATOM 29 H HG21 . THR A 1 3 ? 3.521 7.240 -0.299 1.00 1.03 ? 709 THR A HG21 1
ATOM 30 H HG22 . THR A 1 3 ? 3.181 5.950 0.546 1.00 1.03 ? 709 THR A HG22 1
ATOM 31 H HG23 . THR A 1 3 ? 4.618 6.124 -0.085 1.00 1.03 ? 709 THR A HG23 1
ATOM 32 N N . SER A 1 4 ? 3.458 3.157 0.854 1.00 0.35 ? 710 SER A N 1
ATOM 33 C CA . SER A 1 4 ? 2.875 2.741 2.110 1.00 0.42 ? 710 SER A CA 1
ATOM 34 C C . SER A 1 4 ? 3.613 3.419 3.246 1.00 0.19 ? 710 SER A C 1
ATOM 35 O O . SER A 1 4 ? 4.819 3.673 3.163 1.00 0.44 ? 710 SER A O 1
ATOM 36 C CB . SER A 1 4 ? 2.942 1.228 2.276 1.00 1.51 ? 710 SER A CB 1
ATOM 37 O OG . SER A 1 4 ? 2.310 0.587 1.183 1.00 2.34 ? 710 SER A OG 1
ATOM 38 H H . SER A 1 4 ? 4.317 3.113 0.832 1.00 0.43 ? 710 SER A H 1
ATOM 39 H HA . SER A 1 4 ? 1.944 3.013 2.141 1.00 0.52 ? 710 SER A HA 1
ATOM 40 H HB2 . SER A 1 4 ? 3.872 0.953 2.311 1.00 1.83 ? 710 SER A HB2 1
ATOM 41 H HB3 . SER A 1 4 ? 2.489 0.978 3.097 1.00 1.83 ? 710 SER A HB3 1
ATOM 42 H HG . SER A 1 4 ? 2.348 -0.247 1.277 1.00 2.83 ? 710 SER A HG 1
ATOM 43 N N . THR A 1 5 ? 2.876 3.725 4.306 1.00 0.27 ? 711 THR A N 1
ATOM 44 C CA . THR A 1 5 ? 3.475 4.215 5.528 1.00 0.25 ? 711 THR A CA 1
ATOM 45 C C . THR A 1 5 ? 2.882 3.490 6.714 1.00 0.38 ? 711 THR A C 1
ATOM 46 O O . THR A 1 5 ? 1.789 2.920 6.645 1.00 0.76 ? 711 THR A O 1
ATOM 47 C CB . THR A 1 5 ? 3.235 5.715 5.762 1.00 0.95 ? 711 THR A CB 1
ATOM 48 O OG1 . THR A 1 5 ? 1.845 5.939 6.024 1.00 1.62 ? 711 THR A OG1 1
ATOM 49 C CG2 . THR A 1 5 ? 3.690 6.519 4.570 1.00 1.07 ? 711 THR A CG2 1
ATOM 50 H H . THR A 1 5 ? 2.019 3.657 4.337 1.00 0.34 ? 711 THR A H 1
ATOM 51 H HA . THR A 1 5 ? 4.431 4.052 5.510 1.00 0.31 ? 711 THR A HA 1
ATOM 52 H HB . THR A 1 5 ? 3.752 6.001 6.531 1.00 1.16 ? 711 THR A HB 1
ATOM 53 H HG1 . THR A 1 5 ? 1.705 6.757 6.153 1.00 1.96 ? 711 THR A HG1 1
ATOM 54 H HG21 . THR A 1 5 ? 3.534 7.463 4.728 1.00 1.30 ? 711 THR A HG21 1
ATOM 55 H HG22 . THR A 1 5 ? 4.637 6.377 4.416 1.00 1.30 ? 711 THR A HG22 1
ATOM 56 H HG23 . THR A 1 5 ? 3.198 6.246 3.780 1.00 1.30 ? 711 THR A HG23 1
ATOM 57 N N . ALA A 1 6 ? 3.614 3.553 7.812 1.00 0.54 ? 712 ALA A N 1
ATOM 58 C CA . ALA A 1 6 ? 3.099 3.192 9.112 1.00 1.28 ? 712 ALA A CA 1
ATOM 59 C C . ALA A 1 6 ? 3.984 3.851 10.148 1.00 1.47 ? 712 ALA A C 1
ATOM 60 O O . ALA A 1 6 ? 5.039 4.385 9.813 1.00 2.70 ? 712 ALA A O 1
ATOM 61 C CB . ALA A 1 6 ? 3.076 1.712 9.288 1.00 3.27 ? 712 ALA A CB 1
ATOM 62 O OXT . ALA A 1 6 ? 3.635 3.883 11.325 1.00 0.81 ? 712 ALA A OXT 1
ATOM 63 H H . ALA A 1 6 ? 4.435 3.809 7.826 1.00 0.67 ? 712 ALA A H 1
ATOM 64 H HA . ALA A 1 6 ? 2.196 3.532 9.212 1.00 1.55 ? 712 ALA A HA 1
ATOM 65 H HB1 . ALA A 1 6 ? 2.726 1.504 10.169 1.00 3.94 ? 712 ALA A HB1 1
ATOM 66 H HB2 . ALA A 1 6 ? 2.507 1.322 8.606 1.00 3.94 ? 712 ALA A HB2 1
ATOM 67 H HB3 . ALA A 1 6 ? 3.979 1.369 9.202 1.00 3.94 ? 712 ALA A HB3 1
HETATM 68 O O . HOH B 2 . ? 4.988 0.253 -1.287 1.00 3.28 ? 801 HOH A O 1
#
loop_
_atom_site_anisotrop.id
_atom_site_anisotrop.type_symbol
_atom_site_anisotrop.pdbx_label_atom_id
_atom_site_anisotrop.pdbx_label_alt_id
_atom_site_anisotrop.pdbx_label_comp_id
_atom_site_anisotrop.pdbx_label_asym_id
_atom_site_anisotrop.pdbx_label_seq_id
_atom_site_anisotrop.pdbx_PDB_ins_code
_atom_site_anisotrop.U[1][1]
_atom_site_anisotrop.U[2][2]
_atom_site_anisotrop.U[3][3]
_atom_site_anisotrop.U[1][2]
_atom_site_anisotrop.U[1][3]
_atom_site_anisotrop.U[2][3]
_atom_site_anisotrop.pdbx_auth_seq_id
_atom_site_anisotrop.pdbx_auth_comp_id
_atom_site_anisotrop.pdbx_auth_asym_id
_atom_site_anisotrop.pdbx_auth_atom_id
1 N N . GLY A 1 ? 0.0232 0.0173 0.0113 -0.0078 0.0010 -0.0054 707 GLY A N
2 C CA . GLY A 1 ? 0.0051 0.0031 0.0053 -0.0013 -0.0008 -0.0016 707 GLY A CA
3 C C . GLY A 1 ? 0.0020 0.0006 0.0023 0.0002 -0.0002 -0.0001 707 GLY A C
4 O O . GLY A 1 ? 0.0125 0.0039 0.0044 -0.0018 -0.0036 0.0007 707 GLY A O
7 N N . SER A 2 ? 0.0011 0.0010 0.0032 0.0001 -0.0006 -0.0005 708 SER A N
8 C CA . SER A 2 ? 0.0019 0.0046 0.0062 0.0010 0.0001 -0.0005 708 SER A CA
9 C C . SER A 2 ? 0.0055 0.0195 0.0069 0.0024 -0.0011 -0.0049 708 SER A C
10 O O . SER A 2 ? 0.0073 0.0158 0.0086 0.0023 -0.0024 -0.0056 708 SER A O
11 C CB . SER A 2 ? 0.0178 0.0154 0.0129 -0.0065 -0.0026 0.0046 708 SER A CB
12 O OG . SER A 2 ? 0.0373 0.0193 0.0197 0.0067 -0.0136 -0.0011 708 SER A OG
18 N N . THR A 3 ? 0.0042 0.0139 0.0046 0.0029 -0.0008 -0.0027 709 THR A N
19 C CA . THR A 3 ? 0.0049 0.0114 0.0053 0.0036 0.0000 -0.0010 709 THR A CA
20 C C . THR A 3 ? 0.0027 0.0102 0.0033 0.0005 -0.0002 -0.0022 709 THR A C
21 O O . THR A 3 ? 0.0033 0.0076 0.0031 -0.0022 0.0007 -0.0007 709 THR A O
22 C CB . THR A 3 ? 0.0154 0.0090 0.0122 -0.0022 0.0005 0.0010 709 THR A CB
23 O OG1 . THR A 3 ? 0.0188 0.0066 0.0148 -0.0027 -0.0023 0.0033 709 THR A OG1
24 C CG2 . THR A 3 ? 0.0085 0.0126 0.0109 -0.0044 0.0030 0.0020 709 THR A CG2
32 N N . SER A 4 ? 0.0022 0.0080 0.0029 -0.0008 0.0000 -0.0009 710 SER A N
33 C CA . SER A 4 ? 0.0021 0.0071 0.0067 -0.0011 -0.0005 -0.0002 710 SER A CA
34 C C . SER A 4 ? 0.0012 0.0029 0.0032 -0.0009 -0.0001 -0.0001 710 SER A C
35 O O . SER A 4 ? 0.0062 0.0075 0.0030 0.0003 0.0022 -0.0005 710 SER A O
36 C CB . SER A 4 ? 0.0130 0.0250 0.0193 0.0022 -0.0055 -0.0061 710 SER A CB
37 O OG . SER A 4 ? 0.0359 0.0248 0.0283 -0.0048 -0.0031 -0.0074 710 SER A OG
43 N N . THR A 5 ? 0.0042 0.0017 0.0044 -0.0001 0.0023 -0.0002 711 THR A N
44 C CA . THR A 5 ? 0.0019 0.0017 0.0058 -0.0002 0.0018 -0.0006 711 THR A CA
45 C C . THR A 5 ? 0.0025 0.0058 0.0060 -0.0013 0.0011 0.0008 711 THR A C
46 O O . THR A 5 ? 0.0067 0.0166 0.0053 -0.0048 0.0005 -0.0004 711 THR A O
47 C CB . THR A 5 ? 0.0097 0.0062 0.0202 0.0019 0.0020 -0.0002 711 THR A CB
48 O OG1 . THR A 5 ? 0.0245 0.0118 0.0252 0.0060 0.0067 -0.0025 711 THR A OG1
49 C CG2 . THR A 5 ? 0.0153 0.0068 0.0186 0.0041 0.0012 0.0020 711 THR A CG2
57 N N . ALA A 6 ? 0.0043 0.0072 0.0092 -0.0024 -0.0009 -0.0015 712 ALA A N
58 C CA . ALA A 6 ? 0.0139 0.0211 0.0134 -0.0009 -0.0071 -0.0037 712 ALA A CA
59 C C . ALA A 6 ? 0.0205 0.0229 0.0124 -0.0010 -0.0023 -0.0050 712 ALA A C
60 O O . ALA A 6 ? 0.0368 0.0441 0.0216 -0.0090 -0.0068 -0.0112 712 ALA A O
61 C CB . ALA A 6 ? 0.0631 0.0392 0.0218 0.0044 -0.0124 -0.0069 712 ALA A CB
62 O OXT . ALA A 6 ? 0.0159 0.0068 0.0079 -0.0034 -0.0008 -0.0021 712 ALA A OXT
68 O O . HOH B . ? 0.0426 0.0437 0.0385 0.0122 -0.0121 0.0160 801 HOH A O
#