data_6G8D
#
_entry.id 6G8D
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.391
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 6G8D pdb_00006g8d 10.2210/pdb6g8d/pdb
WWPDB D_1200009571 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2019-04-24
2 'Structure model' 1 1 2019-10-02
3 'Structure model' 1 2 2019-10-23
4 'Structure model' 1 3 2024-05-01
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Data collection'
2 2 'Structure model' 'Derived calculations'
3 3 'Structure model' 'Data collection'
4 3 'Structure model' 'Database references'
5 4 'Structure model' 'Data collection'
6 4 'Structure model' 'Database references'
7 4 'Structure model' 'Refinement description'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 2 'Structure model' pdbx_struct_assembly
2 3 'Structure model' citation
3 3 'Structure model' citation_author
4 4 'Structure model' chem_comp_atom
5 4 'Structure model' chem_comp_bond
6 4 'Structure model' database_2
7 4 'Structure model' pdbx_initial_refinement_model
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 2 'Structure model' '_pdbx_struct_assembly.oligomeric_count'
2 2 'Structure model' '_pdbx_struct_assembly.oligomeric_details'
3 3 'Structure model' '_citation.country'
4 3 'Structure model' '_citation.journal_abbrev'
5 3 'Structure model' '_citation.journal_id_CSD'
6 3 'Structure model' '_citation.journal_id_ISSN'
7 3 'Structure model' '_citation.journal_volume'
8 3 'Structure model' '_citation.page_first'
9 3 'Structure model' '_citation.page_last'
10 3 'Structure model' '_citation.pdbx_database_id_DOI'
11 3 'Structure model' '_citation.pdbx_database_id_PubMed'
12 3 'Structure model' '_citation.title'
13 3 'Structure model' '_citation.year'
14 4 'Structure model' '_database_2.pdbx_DOI'
15 4 'Structure model' '_database_2.pdbx_database_accession'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.entry_id 6G8D
_pdbx_database_status.recvd_initial_deposition_date 2018-04-08
_pdbx_database_status.SG_entry N
_pdbx_database_status.deposit_site PDBE
_pdbx_database_status.process_site PDBE
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_nmr_data ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
_audit_author.identifier_ORCID
'Landau, M.' 1 0000-0002-1743-3430
'Perov, S.' 2 ?
#
_citation.abstract ?
_citation.abstract_id_CAS ?
_citation.book_id_ISBN ?
_citation.book_publisher ?
_citation.book_publisher_city ?
_citation.book_title ?
_citation.coordinate_linkage ?
_citation.country US
_citation.database_id_Medline ?
_citation.details ?
_citation.id primary
_citation.journal_abbrev 'Plos Pathog.'
_citation.journal_id_ASTM ?
_citation.journal_id_CSD ?
_citation.journal_id_ISSN 1553-7374
_citation.journal_full ?
_citation.journal_issue ?
_citation.journal_volume 15
_citation.language ?
_citation.page_first e1007978
_citation.page_last e1007978
_citation.title
;Structural Insights into Curli CsgA Cross-beta Fibril Architecture Inspire Repurposing of Anti-amyloid Compounds as Anti-biofilm Agents.
;
_citation.year 2019
_citation.database_id_CSD ?
_citation.pdbx_database_id_DOI 10.1371/journal.ppat.1007978
_citation.pdbx_database_id_PubMed 31469892
_citation.unpublished_flag ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Perov, S.' 1 ?
primary 'Lidor, O.' 2 0000-0001-6392-4647
primary 'Salinas, N.' 3 0000-0002-3511-2243
primary 'Golan, N.' 4 0000-0001-5064-0776
primary 'Tayeb-Fligelman, E.' 5 ?
primary 'Deshmukh, M.' 6 0000-0002-3704-3229
primary 'Willbold, D.' 7 0000-0002-0065-7366
primary 'Landau, M.' 8 0000-0002-1743-3430
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn 'Major curlin subunit' 812.910 1 ? ? 'Amyloid spine segment LNIYQY from CsgA (residues 45-50) secreted by E. coli' ?
2 water nat water 18.015 1 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code LNIYQY
_entity_poly.pdbx_seq_one_letter_code_can LNIYQY
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
_pdbx_entity_nonpoly.entity_id 2
_pdbx_entity_nonpoly.name water
_pdbx_entity_nonpoly.comp_id HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 LEU n
1 2 ASN n
1 3 ILE n
1 4 TYR n
1 5 GLN n
1 6 TYR n
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num 1
_pdbx_entity_src_syn.pdbx_end_seq_num 6
_pdbx_entity_src_syn.organism_scientific 'Escherichia coli K-12'
_pdbx_entity_src_syn.organism_common_name ?
_pdbx_entity_src_syn.ncbi_taxonomy_id 83333
_pdbx_entity_src_syn.details 'LNIYQY from CsgA, synthesized'
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118
GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144
HOH non-polymer . WATER ? 'H2 O' 18.015
ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173
LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173
TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 LEU 1 1 1 LEU LEU A . n
A 1 2 ASN 2 2 2 ASN ASN A . n
A 1 3 ILE 3 3 3 ILE ILE A . n
A 1 4 TYR 4 4 4 TYR TYR A . n
A 1 5 GLN 5 5 5 GLN GLN A . n
A 1 6 TYR 6 6 6 TYR TYR A . n
#
_pdbx_nonpoly_scheme.asym_id B
_pdbx_nonpoly_scheme.entity_id 2
_pdbx_nonpoly_scheme.mon_id HOH
_pdbx_nonpoly_scheme.ndb_seq_num 1
_pdbx_nonpoly_scheme.pdb_seq_num 101
_pdbx_nonpoly_scheme.auth_seq_num 1
_pdbx_nonpoly_scheme.pdb_mon_id HOH
_pdbx_nonpoly_scheme.auth_mon_id HOH
_pdbx_nonpoly_scheme.pdb_strand_id A
_pdbx_nonpoly_scheme.pdb_ins_code .
#
loop_
_software.citation_id
_software.classification
_software.compiler_name
_software.compiler_version
_software.contact_author
_software.contact_author_email
_software.date
_software.description
_software.dependencies
_software.hardware
_software.language
_software.location
_software.mods
_software.name
_software.os
_software.os_version
_software.type
_software.version
_software.pdbx_ordinal
? 'data reduction' ? ? 'Wolfgang Kabsch' Wolfgang.Kabsch@mpimf-heidelberg.mpg.de ? ? ? ? ?
http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/ ? XDS ? ? package . 1
? 'data scaling' ? ? 'Wolfgang Kabsch' ? ? ? ? ? ?
http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? XSCALE ? ? package . 2
? phasing ? ? 'Randy J. Read' cimr-phaser@lists.cam.ac.uk ? ? ? ? ?
http://www-structmed.cimr.cam.ac.uk/phaser/ ? PHASER ? ? program . 3
? refinement ? ? 'Garib N. Murshudov' garib@ysbl.york.ac.uk ? ? ? ? Fortran_77
http://www.ccp4.ac.uk/dist/html/refmac5.html ? REFMAC ? ? program . 4
? 'data extraction' ? ? PDB deposit@deposit.rcsb.org 'Sep. 1, 2017' ? ? ? C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/ ? PDB_EXTRACT ? ? package 3.24 5
#
_cell.angle_alpha 90.000
_cell.angle_alpha_esd ?
_cell.angle_beta 126.010
_cell.angle_beta_esd ?
_cell.angle_gamma 90.000
_cell.angle_gamma_esd ?
_cell.entry_id 6G8D
_cell.details ?
_cell.formula_units_Z ?
_cell.length_a 42.180
_cell.length_a_esd ?
_cell.length_b 4.820
_cell.length_b_esd ?
_cell.length_c 26.690
_cell.length_c_esd ?
_cell.volume ?
_cell.volume_esd ?
_cell.Z_PDB 4
_cell.reciprocal_angle_alpha ?
_cell.reciprocal_angle_beta ?
_cell.reciprocal_angle_gamma ?
_cell.reciprocal_angle_alpha_esd ?
_cell.reciprocal_angle_beta_esd ?
_cell.reciprocal_angle_gamma_esd ?
_cell.reciprocal_length_a ?
_cell.reciprocal_length_b ?
_cell.reciprocal_length_c ?
_cell.reciprocal_length_a_esd ?
_cell.reciprocal_length_b_esd ?
_cell.reciprocal_length_c_esd ?
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 6G8D
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 5
_symmetry.space_group_name_Hall ?
_symmetry.space_group_name_H-M 'C 1 2 1'
_symmetry.pdbx_full_space_group_name_H-M ?
#
_exptl.absorpt_coefficient_mu ?
_exptl.absorpt_correction_T_max ?
_exptl.absorpt_correction_T_min ?
_exptl.absorpt_correction_type ?
_exptl.absorpt_process_details ?
_exptl.entry_id 6G8D
_exptl.crystals_number 1
_exptl.details ?
_exptl.method 'X-RAY DIFFRACTION'
_exptl.method_details ?
#
_exptl_crystal.colour ?
_exptl_crystal.density_diffrn ?
_exptl_crystal.density_Matthews 1.35
_exptl_crystal.density_method ?
_exptl_crystal.density_percent_sol 8.88
_exptl_crystal.description Needle-like
_exptl_crystal.F_000 ?
_exptl_crystal.id 1
_exptl_crystal.preparation ?
_exptl_crystal.size_max ?
_exptl_crystal.size_mid ?
_exptl_crystal.size_min ?
_exptl_crystal.size_rad ?
_exptl_crystal.colour_lustre ?
_exptl_crystal.colour_modifier ?
_exptl_crystal.colour_primary ?
_exptl_crystal.density_meas ?
_exptl_crystal.density_meas_esd ?
_exptl_crystal.density_meas_gt ?
_exptl_crystal.density_meas_lt ?
_exptl_crystal.density_meas_temp ?
_exptl_crystal.density_meas_temp_esd ?
_exptl_crystal.density_meas_temp_gt ?
_exptl_crystal.density_meas_temp_lt ?
_exptl_crystal.pdbx_crystal_image_url ?
_exptl_crystal.pdbx_crystal_image_format ?
_exptl_crystal.pdbx_mosaicity ?
_exptl_crystal.pdbx_mosaicity_esd ?
#
_exptl_crystal_grow.apparatus ?
_exptl_crystal_grow.atmosphere ?
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.details ?
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.method_ref ?
_exptl_crystal_grow.pH ?
_exptl_crystal_grow.pressure ?
_exptl_crystal_grow.pressure_esd ?
_exptl_crystal_grow.seeding ?
_exptl_crystal_grow.seeding_ref ?
_exptl_crystal_grow.temp 293
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.temp_esd ?
_exptl_crystal_grow.time ?
_exptl_crystal_grow.pdbx_details 'Reservoir contained 0.1 M HEPES pH 7.5, 20% v/v Jeffamine M-600, 10 mM of the TAIVVQ peptide'
_exptl_crystal_grow.pdbx_pH_range ?
#
_diffrn.ambient_environment ?
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.ambient_temp_esd ?
_diffrn.crystal_id 1
_diffrn.crystal_support ?
_diffrn.crystal_treatment ?
_diffrn.details ?
_diffrn.id 1
_diffrn.ambient_pressure ?
_diffrn.ambient_pressure_esd ?
_diffrn.ambient_pressure_gt ?
_diffrn.ambient_pressure_lt ?
_diffrn.ambient_temp_gt ?
_diffrn.ambient_temp_lt ?
#
_diffrn_detector.details ?
_diffrn_detector.detector PIXEL
_diffrn_detector.diffrn_id 1
_diffrn_detector.type 'DECTRIS PILATUS 6M-F'
_diffrn_detector.area_resol_mean ?
_diffrn_detector.dtime ?
_diffrn_detector.pdbx_frames_total ?
_diffrn_detector.pdbx_collection_time_total ?
_diffrn_detector.pdbx_collection_date 2016-05-02
#
_diffrn_radiation.collimation ?
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.filter_edge ?
_diffrn_radiation.inhomogeneity ?
_diffrn_radiation.monochromator ?
_diffrn_radiation.polarisn_norm ?
_diffrn_radiation.polarisn_ratio ?
_diffrn_radiation.probe ?
_diffrn_radiation.type ?
_diffrn_radiation.xray_symbol ?
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.pdbx_wavelength_list ?
_diffrn_radiation.pdbx_wavelength ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_analyzer ?
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 0.9763
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.current ?
_diffrn_source.details ?
_diffrn_source.diffrn_id 1
_diffrn_source.power ?
_diffrn_source.size ?
_diffrn_source.source SYNCHROTRON
_diffrn_source.target ?
_diffrn_source.type 'PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2)'
_diffrn_source.voltage ?
_diffrn_source.take-off_angle ?
_diffrn_source.pdbx_wavelength_list 0.9763
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_synchrotron_beamline 'P14 (MX2)'
_diffrn_source.pdbx_synchrotron_site 'PETRA III, EMBL c/o DESY'
#
_reflns.B_iso_Wilson_estimate 23.727
_reflns.entry_id 6G8D
_reflns.data_reduction_details ?
_reflns.data_reduction_method ?
_reflns.d_resolution_high 1.850
_reflns.d_resolution_low 13.320
_reflns.details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.number_all ?
_reflns.number_obs 462
_reflns.observed_criterion ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.observed_criterion_I_max ?
_reflns.observed_criterion_I_min ?
_reflns.observed_criterion_sigma_F ?
_reflns.observed_criterion_sigma_I ?
_reflns.percent_possible_obs 96.000
_reflns.R_free_details ?
_reflns.Rmerge_F_all ?
_reflns.Rmerge_F_obs ?
_reflns.Friedel_coverage ?
_reflns.number_gt ?
_reflns.threshold_expression ?
_reflns.pdbx_redundancy 3.506
_reflns.pdbx_Rmerge_I_obs 0.189
_reflns.pdbx_Rmerge_I_all ?
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_av_sigmaI ?
_reflns.pdbx_netI_over_sigmaI 3.460
_reflns.pdbx_res_netI_over_av_sigmaI_2 ?
_reflns.pdbx_res_netI_over_sigmaI_2 ?
_reflns.pdbx_chi_squared 0.747
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_d_res_high_opt ?
_reflns.pdbx_d_res_low_opt ?
_reflns.pdbx_d_res_opt_method ?
_reflns.phase_calculation_details ?
_reflns.pdbx_Rrim_I_all 0.225
_reflns.pdbx_Rpim_I_all ?
_reflns.pdbx_d_opt ?
_reflns.pdbx_number_measured_all ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
_reflns.pdbx_CC_half 0.975
_reflns.pdbx_R_split ?
#
loop_
_reflns_shell.d_res_high
_reflns_shell.d_res_low
_reflns_shell.meanI_over_sigI_all
_reflns_shell.meanI_over_sigI_obs
_reflns_shell.number_measured_all
_reflns_shell.number_measured_obs
_reflns_shell.number_possible
_reflns_shell.number_unique_all
_reflns_shell.number_unique_obs
_reflns_shell.percent_possible_all
_reflns_shell.percent_possible_obs
_reflns_shell.Rmerge_F_all
_reflns_shell.Rmerge_F_obs
_reflns_shell.Rmerge_I_all
_reflns_shell.Rmerge_I_obs
_reflns_shell.meanI_over_sigI_gt
_reflns_shell.meanI_over_uI_all
_reflns_shell.meanI_over_uI_gt
_reflns_shell.number_measured_gt
_reflns_shell.number_unique_gt
_reflns_shell.percent_possible_gt
_reflns_shell.Rmerge_F_gt
_reflns_shell.Rmerge_I_gt
_reflns_shell.pdbx_redundancy
_reflns_shell.pdbx_Rsym_value
_reflns_shell.pdbx_chi_squared
_reflns_shell.pdbx_netI_over_sigmaI_all
_reflns_shell.pdbx_netI_over_sigmaI_obs
_reflns_shell.pdbx_Rrim_I_all
_reflns_shell.pdbx_Rpim_I_all
_reflns_shell.pdbx_rejects
_reflns_shell.pdbx_ordinal
_reflns_shell.pdbx_diffrn_id
_reflns_shell.pdbx_CC_half
_reflns_shell.pdbx_R_split
1.850 2.070 ? 2.310 ? ? ? ? 127 98.400 ? ? ? ? 0.463 ? ? ? ? ? ? ? ? 4.181 ? ? ? ? 0.529 ? ? 1 1 0.891 ?
2.070 2.390 ? 3.090 ? ? ? ? 118 96.700 ? ? ? ? 0.318 ? ? ? ? ? ? ? ? 3.788 ? ? ? ? 0.367 ? ? 2 1 0.917 ?
2.390 2.930 ? 3.270 ? ? ? ? 83 93.300 ? ? ? ? 0.252 ? ? ? ? ? ? ? ? 3.313 ? ? ? ? 0.299 ? ? 3 1 0.956 ?
2.930 4.140 ? 5.380 ? ? ? ? 85 98.800 ? ? ? ? 0.147 ? ? ? ? ? ? ? ? 3.176 ? ? ? ? 0.174 ? ? 4 1 0.968 ?
4.140 13.320 ? 4.300 ? ? ? ? 49 89.100 ? ? ? ? 0.101 ? ? ? ? ? ? ? ? 1.980 ? ? ? ? 0.134 ? ? 5 1 0.972 ?
#
_refine.aniso_B[1][1] -0.4900
_refine.aniso_B[1][2] 0.0000
_refine.aniso_B[1][3] 1.0700
_refine.aniso_B[2][2] -2.4900
_refine.aniso_B[2][3] 0.0000
_refine.aniso_B[3][3] 0.7000
_refine.B_iso_max 44.780
_refine.B_iso_mean 24.7280
_refine.B_iso_min 19.800
_refine.correlation_coeff_Fo_to_Fc 0.9690
_refine.correlation_coeff_Fo_to_Fc_free 0.9680
_refine.details
'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY'
_refine.diff_density_max ?
_refine.diff_density_max_esd ?
_refine.diff_density_min ?
_refine.diff_density_min_esd ?
_refine.diff_density_rms ?
_refine.diff_density_rms_esd ?
_refine.entry_id 6G8D
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.ls_abs_structure_details ?
_refine.ls_abs_structure_Flack ?
_refine.ls_abs_structure_Flack_esd ?
_refine.ls_abs_structure_Rogers ?
_refine.ls_abs_structure_Rogers_esd ?
_refine.ls_d_res_high 1.8500
_refine.ls_d_res_low 13.3200
_refine.ls_extinction_coef ?
_refine.ls_extinction_coef_esd ?
_refine.ls_extinction_expression ?
_refine.ls_extinction_method ?
_refine.ls_goodness_of_fit_all ?
_refine.ls_goodness_of_fit_all_esd ?
_refine.ls_goodness_of_fit_obs ?
_refine.ls_goodness_of_fit_obs_esd ?
_refine.ls_hydrogen_treatment ?
_refine.ls_matrix_type ?
_refine.ls_number_constraints ?
_refine.ls_number_parameters ?
_refine.ls_number_reflns_all ?
_refine.ls_number_reflns_obs 415
_refine.ls_number_reflns_R_free 46
_refine.ls_number_reflns_R_work ?
_refine.ls_number_restraints ?
_refine.ls_percent_reflns_obs 97.2600
_refine.ls_percent_reflns_R_free 10.0000
_refine.ls_R_factor_all ?
_refine.ls_R_factor_obs 0.1780
_refine.ls_R_factor_R_free 0.1910
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_R_factor_R_work 0.1764
_refine.ls_R_Fsqd_factor_obs ?
_refine.ls_R_I_factor_obs ?
_refine.ls_redundancy_reflns_all ?
_refine.ls_redundancy_reflns_obs ?
_refine.ls_restrained_S_all ?
_refine.ls_restrained_S_obs ?
_refine.ls_shift_over_esd_max ?
_refine.ls_shift_over_esd_mean ?
_refine.ls_structure_factor_coef ?
_refine.ls_weighting_details ?
_refine.ls_weighting_scheme ?
_refine.ls_wR_factor_all ?
_refine.ls_wR_factor_obs ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.occupancy_max ?
_refine.occupancy_min ?
_refine.solvent_model_details ?
_refine.solvent_model_param_bsol ?
_refine.solvent_model_param_ksol ?
_refine.ls_R_factor_gt ?
_refine.ls_goodness_of_fit_gt ?
_refine.ls_goodness_of_fit_ref ?
_refine.ls_shift_over_su_max ?
_refine.ls_shift_over_su_max_lt ?
_refine.ls_shift_over_su_mean ?
_refine.ls_shift_over_su_mean_lt ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 0.000
_refine.pdbx_ls_sigma_Fsqd ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_starting_model 'Ideal beta-strand'
_refine.pdbx_stereochemistry_target_values ?
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_overall_ESU_R 0.1960
_refine.pdbx_overall_ESU_R_Free 0.1390
_refine.pdbx_solvent_vdw_probe_radii 1.2000
_refine.pdbx_solvent_ion_probe_radii 0.8000
_refine.pdbx_solvent_shrinkage_radii 0.8000
_refine.pdbx_real_space_R ?
_refine.pdbx_density_correlation ?
_refine.pdbx_pd_number_of_powder_patterns ?
_refine.pdbx_pd_number_of_points ?
_refine.pdbx_pd_meas_number_of_points ?
_refine.pdbx_pd_proc_ls_prof_R_factor ?
_refine.pdbx_pd_proc_ls_prof_wR_factor ?
_refine.pdbx_pd_Marquardt_correlation_coeff ?
_refine.pdbx_pd_Fsqrd_R_factor ?
_refine.pdbx_pd_ls_matrix_band_width ?
_refine.pdbx_overall_phase_error ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_diffrn_id 1
_refine.overall_SU_B 5.6850
_refine.overall_SU_ML 0.1460
_refine.overall_SU_R_Cruickshank_DPI 0.1959
_refine.overall_SU_R_free ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_average_fsc_overall ?
_refine.pdbx_average_fsc_work ?
_refine.pdbx_average_fsc_free ?
#
_refine_hist.cycle_id final
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.d_res_high 1.8500
_refine_hist.d_res_low 13.3200
_refine_hist.pdbx_number_atoms_ligand 0
_refine_hist.number_atoms_solvent 1
_refine_hist.number_atoms_total 59
_refine_hist.pdbx_number_residues_total 6
_refine_hist.pdbx_B_iso_mean_solvent 44.78
_refine_hist.pdbx_number_atoms_protein 58
_refine_hist.pdbx_number_atoms_nucleic_acid 0
#
loop_
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.criterion
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.number
_refine_ls_restr.rejects
_refine_ls_restr.type
_refine_ls_restr.weight
_refine_ls_restr.pdbx_restraint_function
'X-RAY DIFFRACTION' ? 0.023 0.020 59 ? r_bond_refined_d ? ?
'X-RAY DIFFRACTION' ? 0.041 0.020 50 ? r_bond_other_d ? ?
'X-RAY DIFFRACTION' ? 1.506 1.986 80 ? r_angle_refined_deg ? ?
'X-RAY DIFFRACTION' ? 1.090 3.000 115 ? r_angle_other_deg ? ?
'X-RAY DIFFRACTION' ? 3.040 5.000 5 ? r_dihedral_angle_1_deg ? ?
'X-RAY DIFFRACTION' ? 37.579 25.000 4 ? r_dihedral_angle_2_deg ? ?
'X-RAY DIFFRACTION' ? 8.709 15.000 9 ? r_dihedral_angle_3_deg ? ?
'X-RAY DIFFRACTION' ? 0.092 0.200 8 ? r_chiral_restr ? ?
'X-RAY DIFFRACTION' ? 0.009 0.020 63 ? r_gen_planes_refined ? ?
'X-RAY DIFFRACTION' ? 0.000 0.020 13 ? r_gen_planes_other ? ?
#
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_ls_shell.d_res_high 1.8500
_refine_ls_shell.d_res_low 1.8970
_refine_ls_shell.number_reflns_all 32
_refine_ls_shell.number_reflns_obs ?
_refine_ls_shell.number_reflns_R_free 3
_refine_ls_shell.number_reflns_R_work 29
_refine_ls_shell.percent_reflns_obs 100.0000
_refine_ls_shell.percent_reflns_R_free ?
_refine_ls_shell.R_factor_all ?
_refine_ls_shell.R_factor_obs ?
_refine_ls_shell.R_factor_R_free 0.3070
_refine_ls_shell.R_factor_R_free_error 0.0000
_refine_ls_shell.R_factor_R_work 0.2780
_refine_ls_shell.redundancy_reflns_all ?
_refine_ls_shell.redundancy_reflns_obs ?
_refine_ls_shell.wR_factor_all ?
_refine_ls_shell.wR_factor_obs ?
_refine_ls_shell.wR_factor_R_free ?
_refine_ls_shell.wR_factor_R_work ?
_refine_ls_shell.pdbx_total_number_of_bins_used 20
_refine_ls_shell.pdbx_phase_error ?
_refine_ls_shell.pdbx_fsc_work ?
_refine_ls_shell.pdbx_fsc_free ?
#
_struct.entry_id 6G8D
_struct.title
'Crystal Structure of the Amyloid-like LNIYQY segment from the R1 repeat of the E. coli Biofilm-associated CsgA Curli protein'
_struct.pdbx_model_details Curli
_struct.pdbx_formula_weight ?
_struct.pdbx_formula_weight_method ?
_struct.pdbx_model_type_details ?
_struct.pdbx_CASP_flag N
#
_struct_keywords.entry_id 6G8D
_struct_keywords.text 'Bacterial steric-zipper cross-beta amyloid fibril from E. coli, PROTEIN FIBRIL'
_struct_keywords.pdbx_keywords 'PROTEIN FIBRIL'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
#
_struct_ref.id 1
_struct_ref.db_name UNP
_struct_ref.db_code CSGA_ECOLI
_struct_ref.pdbx_db_accession P28307
_struct_ref.pdbx_db_isoform ?
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code LNIYQY
_struct_ref.pdbx_align_begin 45
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 6G8D
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 6
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession P28307
_struct_ref_seq.db_align_beg 45
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 50
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 6
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details octadecameric
_pdbx_struct_assembly.oligomeric_count 18
#
loop_
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
_pdbx_struct_assembly_gen.asym_id_list
1 1 A,B
1 2 A,B
1 3 A,B
1 4 A,B
1 5 A,B
1 6 A,B
1 7 A,B
1 8 A,B
1 9 A,B
1 10 A,B
1 11 A,B
1 12 A,B
1 13 A,B
1 14 A,B
1 15 A,B
1 16 A,B
1 17 A,B
1 18 A,B
#
_pdbx_struct_assembly_auth_evidence.id 1
_pdbx_struct_assembly_auth_evidence.assembly_id 1
_pdbx_struct_assembly_auth_evidence.experimental_support microscopy
_pdbx_struct_assembly_auth_evidence.details 'The fibrils are observed by TEM'
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 1_545 x,y-1,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
1.0000000000 0.0000000000 -4.8200000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
3 'crystal symmetry operation' 1_535 x,y-2,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
1.0000000000 0.0000000000 -9.6400000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
4 'crystal symmetry operation' 1_525 x,y-3,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
1.0000000000 0.0000000000 -14.4600000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
5 'crystal symmetry operation' 1_515 x,y-4,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
1.0000000000 0.0000000000 -19.2800000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
6 'crystal symmetry operation' 1_565 x,y+1,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
1.0000000000 0.0000000000 4.8200000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
7 'crystal symmetry operation' 1_575 x,y+2,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
1.0000000000 0.0000000000 9.6400000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
8 'crystal symmetry operation' 1_585 x,y+3,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
1.0000000000 0.0000000000 14.4600000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
9 'crystal symmetry operation' 1_595 x,y+4,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
1.0000000000 0.0000000000 19.2800000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
10 'crystal symmetry operation' 4_555 -x+1/2,y+1/2,-z -1.0000000000 0.0000000000 0.0000000000 21.0900000000 0.0000000000
1.0000000000 0.0000000000 2.4100000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
11 'crystal symmetry operation' 4_545 -x+1/2,y-1/2,-z -1.0000000000 0.0000000000 0.0000000000 21.0900000000 0.0000000000
1.0000000000 0.0000000000 -2.4100000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
12 'crystal symmetry operation' 4_535 -x+1/2,y-3/2,-z -1.0000000000 0.0000000000 0.0000000000 21.0900000000 0.0000000000
1.0000000000 0.0000000000 -7.2300000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
13 'crystal symmetry operation' 4_525 -x+1/2,y-5/2,-z -1.0000000000 0.0000000000 0.0000000000 21.0900000000 0.0000000000
1.0000000000 0.0000000000 -12.0500000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
14 'crystal symmetry operation' 4_515 -x+1/2,y-7/2,-z -1.0000000000 0.0000000000 0.0000000000 21.0900000000 0.0000000000
1.0000000000 0.0000000000 -16.8700000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
15 'crystal symmetry operation' 4_565 -x+1/2,y+3/2,-z -1.0000000000 0.0000000000 0.0000000000 21.0900000000 0.0000000000
1.0000000000 0.0000000000 7.2300000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
16 'crystal symmetry operation' 4_575 -x+1/2,y+5/2,-z -1.0000000000 0.0000000000 0.0000000000 21.0900000000 0.0000000000
1.0000000000 0.0000000000 12.0500000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
17 'crystal symmetry operation' 4_585 -x+1/2,y+7/2,-z -1.0000000000 0.0000000000 0.0000000000 21.0900000000 0.0000000000
1.0000000000 0.0000000000 16.8700000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
18 'crystal symmetry operation' 4_595 -x+1/2,y+9/2,-z -1.0000000000 0.0000000000 0.0000000000 21.0900000000 0.0000000000
1.0000000000 0.0000000000 21.6900000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
#
_pdbx_phasing_MR.entry_id 6G8D
_pdbx_phasing_MR.method_rotation ?
_pdbx_phasing_MR.method_translation ?
_pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO'
_pdbx_phasing_MR.R_factor ?
_pdbx_phasing_MR.R_rigid_body ?
_pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ?
_pdbx_phasing_MR.correlation_coeff_Io_to_Ic ?
_pdbx_phasing_MR.d_res_high_rotation 1.900
_pdbx_phasing_MR.d_res_low_rotation 13.320
_pdbx_phasing_MR.d_res_high_translation 1.900
_pdbx_phasing_MR.d_res_low_translation 13.320
_pdbx_phasing_MR.packing ?
_pdbx_phasing_MR.reflns_percent_rotation ?
_pdbx_phasing_MR.reflns_percent_translation ?
_pdbx_phasing_MR.sigma_F_rotation ?
_pdbx_phasing_MR.sigma_F_translation ?
_pdbx_phasing_MR.sigma_I_rotation ?
_pdbx_phasing_MR.sigma_I_translation ?
#
_phasing.method MR
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
ASN N N N N 1
ASN CA C N S 2
ASN C C N N 3
ASN O O N N 4
ASN CB C N N 5
ASN CG C N N 6
ASN OD1 O N N 7
ASN ND2 N N N 8
ASN OXT O N N 9
ASN H H N N 10
ASN H2 H N N 11
ASN HA H N N 12
ASN HB2 H N N 13
ASN HB3 H N N 14
ASN HD21 H N N 15
ASN HD22 H N N 16
ASN HXT H N N 17
GLN N N N N 18
GLN CA C N S 19
GLN C C N N 20
GLN O O N N 21
GLN CB C N N 22
GLN CG C N N 23
GLN CD C N N 24
GLN OE1 O N N 25
GLN NE2 N N N 26
GLN OXT O N N 27
GLN H H N N 28
GLN H2 H N N 29
GLN HA H N N 30
GLN HB2 H N N 31
GLN HB3 H N N 32
GLN HG2 H N N 33
GLN HG3 H N N 34
GLN HE21 H N N 35
GLN HE22 H N N 36
GLN HXT H N N 37
HOH O O N N 38
HOH H1 H N N 39
HOH H2 H N N 40
ILE N N N N 41
ILE CA C N S 42
ILE C C N N 43
ILE O O N N 44
ILE CB C N S 45
ILE CG1 C N N 46
ILE CG2 C N N 47
ILE CD1 C N N 48
ILE OXT O N N 49
ILE H H N N 50
ILE H2 H N N 51
ILE HA H N N 52
ILE HB H N N 53
ILE HG12 H N N 54
ILE HG13 H N N 55
ILE HG21 H N N 56
ILE HG22 H N N 57
ILE HG23 H N N 58
ILE HD11 H N N 59
ILE HD12 H N N 60
ILE HD13 H N N 61
ILE HXT H N N 62
LEU N N N N 63
LEU CA C N S 64
LEU C C N N 65
LEU O O N N 66
LEU CB C N N 67
LEU CG C N N 68
LEU CD1 C N N 69
LEU CD2 C N N 70
LEU OXT O N N 71
LEU H H N N 72
LEU H2 H N N 73
LEU HA H N N 74
LEU HB2 H N N 75
LEU HB3 H N N 76
LEU HG H N N 77
LEU HD11 H N N 78
LEU HD12 H N N 79
LEU HD13 H N N 80
LEU HD21 H N N 81
LEU HD22 H N N 82
LEU HD23 H N N 83
LEU HXT H N N 84
TYR N N N N 85
TYR CA C N S 86
TYR C C N N 87
TYR O O N N 88
TYR CB C N N 89
TYR CG C Y N 90
TYR CD1 C Y N 91
TYR CD2 C Y N 92
TYR CE1 C Y N 93
TYR CE2 C Y N 94
TYR CZ C Y N 95
TYR OH O N N 96
TYR OXT O N N 97
TYR H H N N 98
TYR H2 H N N 99
TYR HA H N N 100
TYR HB2 H N N 101
TYR HB3 H N N 102
TYR HD1 H N N 103
TYR HD2 H N N 104
TYR HE1 H N N 105
TYR HE2 H N N 106
TYR HH H N N 107
TYR HXT H N N 108
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ASN N CA sing N N 1
ASN N H sing N N 2
ASN N H2 sing N N 3
ASN CA C sing N N 4
ASN CA CB sing N N 5
ASN CA HA sing N N 6
ASN C O doub N N 7
ASN C OXT sing N N 8
ASN CB CG sing N N 9
ASN CB HB2 sing N N 10
ASN CB HB3 sing N N 11
ASN CG OD1 doub N N 12
ASN CG ND2 sing N N 13
ASN ND2 HD21 sing N N 14
ASN ND2 HD22 sing N N 15
ASN OXT HXT sing N N 16
GLN N CA sing N N 17
GLN N H sing N N 18
GLN N H2 sing N N 19
GLN CA C sing N N 20
GLN CA CB sing N N 21
GLN CA HA sing N N 22
GLN C O doub N N 23
GLN C OXT sing N N 24
GLN CB CG sing N N 25
GLN CB HB2 sing N N 26
GLN CB HB3 sing N N 27
GLN CG CD sing N N 28
GLN CG HG2 sing N N 29
GLN CG HG3 sing N N 30
GLN CD OE1 doub N N 31
GLN CD NE2 sing N N 32
GLN NE2 HE21 sing N N 33
GLN NE2 HE22 sing N N 34
GLN OXT HXT sing N N 35
HOH O H1 sing N N 36
HOH O H2 sing N N 37
ILE N CA sing N N 38
ILE N H sing N N 39
ILE N H2 sing N N 40
ILE CA C sing N N 41
ILE CA CB sing N N 42
ILE CA HA sing N N 43
ILE C O doub N N 44
ILE C OXT sing N N 45
ILE CB CG1 sing N N 46
ILE CB CG2 sing N N 47
ILE CB HB sing N N 48
ILE CG1 CD1 sing N N 49
ILE CG1 HG12 sing N N 50
ILE CG1 HG13 sing N N 51
ILE CG2 HG21 sing N N 52
ILE CG2 HG22 sing N N 53
ILE CG2 HG23 sing N N 54
ILE CD1 HD11 sing N N 55
ILE CD1 HD12 sing N N 56
ILE CD1 HD13 sing N N 57
ILE OXT HXT sing N N 58
LEU N CA sing N N 59
LEU N H sing N N 60
LEU N H2 sing N N 61
LEU CA C sing N N 62
LEU CA CB sing N N 63
LEU CA HA sing N N 64
LEU C O doub N N 65
LEU C OXT sing N N 66
LEU CB CG sing N N 67
LEU CB HB2 sing N N 68
LEU CB HB3 sing N N 69
LEU CG CD1 sing N N 70
LEU CG CD2 sing N N 71
LEU CG HG sing N N 72
LEU CD1 HD11 sing N N 73
LEU CD1 HD12 sing N N 74
LEU CD1 HD13 sing N N 75
LEU CD2 HD21 sing N N 76
LEU CD2 HD22 sing N N 77
LEU CD2 HD23 sing N N 78
LEU OXT HXT sing N N 79
TYR N CA sing N N 80
TYR N H sing N N 81
TYR N H2 sing N N 82
TYR CA C sing N N 83
TYR CA CB sing N N 84
TYR CA HA sing N N 85
TYR C O doub N N 86
TYR C OXT sing N N 87
TYR CB CG sing N N 88
TYR CB HB2 sing N N 89
TYR CB HB3 sing N N 90
TYR CG CD1 doub Y N 91
TYR CG CD2 sing Y N 92
TYR CD1 CE1 sing Y N 93
TYR CD1 HD1 sing N N 94
TYR CD2 CE2 doub Y N 95
TYR CD2 HD2 sing N N 96
TYR CE1 CZ doub Y N 97
TYR CE1 HE1 sing N N 98
TYR CE2 CZ sing Y N 99
TYR CE2 HE2 sing N N 100
TYR CZ OH sing N N 101
TYR OH HH sing N N 102
TYR OXT HXT sing N N 103
#
_pdbx_initial_refinement_model.accession_code ?
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'in silico model'
_pdbx_initial_refinement_model.source_name Other
_pdbx_initial_refinement_model.details 'Ideal beta-strand'
#
_atom_sites.entry_id 6G8D
_atom_sites.fract_transf_matrix[1][1] 0.023708
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.017234
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.207469
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.046320
_atom_sites.fract_transf_vector[1] 0.000000
_atom_sites.fract_transf_vector[2] 0.000000
_atom_sites.fract_transf_vector[3] 0.000000
#
loop_
_atom_type.symbol
C
N
O
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 N N . LEU A 1 1 ? -2.952 3.212 5.635 1.00 34.69 ? 1 LEU A N 1
ATOM 2 C CA . LEU A 1 1 ? -1.640 3.430 6.341 1.00 30.86 ? 1 LEU A CA 1
ATOM 3 C C . LEU A 1 1 ? -0.464 2.773 5.584 1.00 30.01 ? 1 LEU A C 1
ATOM 4 O O . LEU A 1 1 ? -0.390 1.514 5.449 1.00 28.28 ? 1 LEU A O 1
ATOM 5 C CB . LEU A 1 1 ? -1.737 2.952 7.788 1.00 30.78 ? 1 LEU A CB 1
ATOM 6 C CG . LEU A 1 1 ? -0.520 3.206 8.639 1.00 30.17 ? 1 LEU A CG 1
ATOM 7 C CD1 . LEU A 1 1 ? 0.023 4.594 8.520 1.00 30.64 ? 1 LEU A CD1 1
ATOM 8 C CD2 . LEU A 1 1 ? -0.891 2.965 10.091 1.00 30.75 ? 1 LEU A CD2 1
ATOM 9 N N . ASN A 1 2 ? 0.396 3.633 5.001 1.00 25.62 ? 2 ASN A N 1
ATOM 10 C CA . ASN A 1 2 ? 1.591 3.148 4.363 1.00 24.23 ? 2 ASN A CA 1
ATOM 11 C C . ASN A 1 2 ? 2.747 3.733 5.060 1.00 22.46 ? 2 ASN A C 1
ATOM 12 O O . ASN A 1 2 ? 2.866 4.930 5.110 1.00 22.73 ? 2 ASN A O 1
ATOM 13 C CB . ASN A 1 2 ? 1.645 3.512 2.903 1.00 25.32 ? 2 ASN A CB 1
ATOM 14 C CG . ASN A 1 2 ? 0.519 2.907 2.163 1.00 28.20 ? 2 ASN A CG 1
ATOM 15 O OD1 . ASN A 1 2 ? -0.343 3.618 1.698 1.00 31.77 ? 2 ASN A OD1 1
ATOM 16 N ND2 . ASN A 1 2 ? 0.486 1.587 2.099 1.00 30.70 ? 2 ASN A ND2 1
ATOM 17 N N . ILE A 1 3 ? 3.658 2.867 5.463 1.00 20.62 ? 3 ILE A N 1
ATOM 18 C CA . ILE A 1 3 ? 4.798 3.258 6.231 1.00 21.54 ? 3 ILE A CA 1
ATOM 19 C C . ILE A 1 3 ? 6.024 2.737 5.563 1.00 20.00 ? 3 ILE A C 1
ATOM 20 O O . ILE A 1 3 ? 6.141 1.532 5.344 1.00 20.83 ? 3 ILE A O 1
ATOM 21 C CB . ILE A 1 3 ? 4.681 2.735 7.648 1.00 22.54 ? 3 ILE A CB 1
ATOM 22 C CG1 . ILE A 1 3 ? 3.477 3.412 8.347 1.00 22.69 ? 3 ILE A CG1 1
ATOM 23 C CG2 . ILE A 1 3 ? 5.955 3.065 8.428 1.00 26.21 ? 3 ILE A CG2 1
ATOM 24 C CD1 . ILE A 1 3 ? 3.193 2.769 9.641 1.00 25.26 ? 3 ILE A CD1 1
ATOM 25 N N . TYR A 1 4 ? 6.958 3.664 5.287 1.00 20.48 ? 4 TYR A N 1
ATOM 26 C CA . TYR A 1 4 ? 8.227 3.338 4.638 1.00 21.17 ? 4 TYR A CA 1
ATOM 27 C C . TYR A 1 4 ? 9.320 3.745 5.523 1.00 20.58 ? 4 TYR A C 1
ATOM 28 O O . TYR A 1 4 ? 9.485 4.923 5.742 1.00 22.80 ? 4 TYR A O 1
ATOM 29 C CB . TYR A 1 4 ? 8.366 4.046 3.256 1.00 21.56 ? 4 TYR A CB 1
ATOM 30 C CG . TYR A 1 4 ? 7.184 3.865 2.396 1.00 20.27 ? 4 TYR A CG 1
ATOM 31 C CD1 . TYR A 1 4 ? 6.082 4.699 2.529 1.00 21.86 ? 4 TYR A CD1 1
ATOM 32 C CD2 . TYR A 1 4 ? 7.138 2.847 1.488 1.00 21.00 ? 4 TYR A CD2 1
ATOM 33 C CE1 . TYR A 1 4 ? 4.984 4.562 1.725 1.00 22.69 ? 4 TYR A CE1 1
ATOM 34 C CE2 . TYR A 1 4 ? 6.027 2.681 0.686 1.00 20.86 ? 4 TYR A CE2 1
ATOM 35 C CZ . TYR A 1 4 ? 4.958 3.545 0.793 1.00 23.29 ? 4 TYR A CZ 1
ATOM 36 O OH . TYR A 1 4 ? 3.829 3.400 0.005 1.00 23.42 ? 4 TYR A OH 1
ATOM 37 N N . GLN A 1 5 ? 10.082 2.784 5.987 1.00 19.80 ? 5 GLN A N 1
ATOM 38 C CA . GLN A 1 5 ? 11.170 3.082 6.879 1.00 24.93 ? 5 GLN A CA 1
ATOM 39 C C . GLN A 1 5 ? 12.485 2.569 6.391 1.00 24.08 ? 5 GLN A C 1
ATOM 40 O O . GLN A 1 5 ? 12.710 1.398 6.320 1.00 25.29 ? 5 GLN A O 1
ATOM 41 C CB . GLN A 1 5 ? 10.880 2.543 8.305 1.00 27.62 ? 5 GLN A CB 1
ATOM 42 C CG . GLN A 1 5 ? 9.797 3.267 9.130 1.00 29.32 ? 5 GLN A CG 1
ATOM 43 C CD . GLN A 1 5 ? 9.820 2.831 10.606 1.00 30.50 ? 5 GLN A CD 1
ATOM 44 O OE1 . GLN A 1 5 ? 9.651 3.642 11.519 1.00 36.27 ? 5 GLN A OE1 1
ATOM 45 N NE2 . GLN A 1 5 ? 10.067 1.551 10.839 1.00 34.19 ? 5 GLN A NE2 1
ATOM 46 N N . TYR A 1 6 ? 13.376 3.491 6.118 1.00 26.45 ? 6 TYR A N 1
ATOM 47 C CA . TYR A 1 6 ? 14.668 3.174 5.631 1.00 29.07 ? 6 TYR A CA 1
ATOM 48 C C . TYR A 1 6 ? 15.688 3.553 6.701 1.00 33.62 ? 6 TYR A C 1
ATOM 49 O O . TYR A 1 6 ? 15.556 4.582 7.366 1.00 43.13 ? 6 TYR A O 1
ATOM 50 C CB . TYR A 1 6 ? 14.915 3.998 4.380 1.00 26.82 ? 6 TYR A CB 1
ATOM 51 C CG . TYR A 1 6 ? 13.915 3.826 3.293 1.00 23.42 ? 6 TYR A CG 1
ATOM 52 C CD1 . TYR A 1 6 ? 14.067 2.878 2.295 1.00 22.57 ? 6 TYR A CD1 1
ATOM 53 C CD2 . TYR A 1 6 ? 12.812 4.646 3.244 1.00 24.08 ? 6 TYR A CD2 1
ATOM 54 C CE1 . TYR A 1 6 ? 13.124 2.753 1.290 1.00 21.73 ? 6 TYR A CE1 1
ATOM 55 C CE2 . TYR A 1 6 ? 11.875 4.525 2.246 1.00 22.38 ? 6 TYR A CE2 1
ATOM 56 C CZ . TYR A 1 6 ? 12.055 3.575 1.272 1.00 20.68 ? 6 TYR A CZ 1
ATOM 57 O OH . TYR A 1 6 ? 11.123 3.505 0.299 1.00 20.97 ? 6 TYR A OH 1
ATOM 58 O OXT . TYR A 1 6 ? 16.691 2.892 6.956 1.00 41.18 ? 6 TYR A OXT 1
HETATM 59 O O . HOH B 2 . ? 14.726 6.067 8.906 1.00 44.78 ? 101 HOH A O 1
#