data_6DY9
#
_entry.id 6DY9
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.387
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 6DY9 pdb_00006dy9 10.2210/pdb6dy9/pdb
WWPDB D_1000235430 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2019-01-23
2 'Structure model' 1 1 2019-12-04
3 'Structure model' 1 2 2024-03-13
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Author supporting evidence'
2 3 'Structure model' 'Data collection'
3 3 'Structure model' 'Database references'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 2 'Structure model' pdbx_audit_support
2 3 'Structure model' chem_comp_atom
3 3 'Structure model' chem_comp_bond
4 3 'Structure model' database_2
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 2 'Structure model' '_pdbx_audit_support.funding_organization'
2 2 'Structure model' '_pdbx_audit_support.grant_number'
3 3 'Structure model' '_database_2.pdbx_DOI'
4 3 'Structure model' '_database_2.pdbx_database_accession'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.entry_id 6DY9
_pdbx_database_status.recvd_initial_deposition_date 2018-07-01
_pdbx_database_status.SG_entry N
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_nmr_data ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
_audit_author.identifier_ORCID
'Hou, C.' 1 ?
'Tsodikov, O.V.' 2 ?
#
_citation.abstract ?
_citation.abstract_id_CAS ?
_citation.book_id_ISBN ?
_citation.book_publisher ?
_citation.book_publisher_city ?
_citation.book_title ?
_citation.coordinate_linkage ?
_citation.country DK
_citation.database_id_Medline ?
_citation.details ?
_citation.id primary
_citation.journal_abbrev 'Acta Crystallogr.,Sect.D'
_citation.journal_id_ASTM ABCRE6
_citation.journal_id_CSD 0766
_citation.journal_id_ISSN 0907-4449
_citation.journal_full ?
_citation.journal_issue ?
_citation.journal_volume 75
_citation.language ?
_citation.page_first 32
_citation.page_last ?
_citation.title
'Utilizing guanine coordinated Zn2+ to determine DNA crystal structures by single-wavelength anomalous diffraction'
_citation.year 2019
_citation.database_id_CSD ?
_citation.pdbx_database_id_DOI ?
_citation.pdbx_database_id_PubMed ?
_citation.unpublished_flag ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Hou, C.' 1 ?
primary 'Tsodikov, O.V.' 2 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn
;DNA (5'-D(*GP*GP*GP*AP*TP*CP*CP*C)-3')
;
2427.605 2 ? ? ? ?
2 non-polymer syn 'ZINC ION' 65.409 2 ? ? ? ?
3 water nat water 18.015 1 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type polydeoxyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code '(DG)(DG)(DG)(DA)(DT)(DC)(DC)(DC)'
_entity_poly.pdbx_seq_one_letter_code_can GGGATCCC
_entity_poly.pdbx_strand_id A,B
_entity_poly.pdbx_target_identifier ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2 'ZINC ION' ZN
3 water HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 DG n
1 2 DG n
1 3 DG n
1 4 DA n
1 5 DT n
1 6 DC n
1 7 DC n
1 8 DC n
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num 1
_pdbx_entity_src_syn.pdbx_end_seq_num 8
_pdbx_entity_src_syn.organism_scientific 'synthetic construct'
_pdbx_entity_src_syn.organism_common_name ?
_pdbx_entity_src_syn.ncbi_taxonomy_id 32630
_pdbx_entity_src_syn.details ?
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221
DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208
HOH non-polymer . WATER ? 'H2 O' 18.015
ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 DG 1 1 1 DG DG A . n
A 1 2 DG 2 2 2 DG DG A . n
A 1 3 DG 3 3 3 DG DG A . n
A 1 4 DA 4 4 4 DA DA A . n
A 1 5 DT 5 5 5 DT DT A . n
A 1 6 DC 6 6 6 DC DC A . n
A 1 7 DC 7 7 7 DC DC A . n
A 1 8 DC 8 8 8 DC DC A . n
B 1 1 DG 1 9 9 DG DG B . n
B 1 2 DG 2 10 10 DG DG B . n
B 1 3 DG 3 11 11 DG DG B . n
B 1 4 DA 4 12 12 DA DA B . n
B 1 5 DT 5 13 13 DT DT B . n
B 1 6 DC 6 14 14 DC DC B . n
B 1 7 DC 7 15 15 DC DC B . n
B 1 8 DC 8 16 16 DC DC B . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ZN 1 101 3 ZN ZN A .
D 2 ZN 1 101 2 ZN ZN B .
E 3 HOH 1 201 1 HOH HOH B .
#
loop_
_software.citation_id
_software.classification
_software.compiler_name
_software.compiler_version
_software.contact_author
_software.contact_author_email
_software.date
_software.description
_software.dependencies
_software.hardware
_software.language
_software.location
_software.mods
_software.name
_software.os
_software.os_version
_software.type
_software.version
_software.pdbx_ordinal
? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0071 1
? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2
? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3
? phasing ? ? ? ? ? ? ? ? ? ? ? AutoSol ? ? ? . 4
#
_cell.angle_alpha 90.00
_cell.angle_alpha_esd ?
_cell.angle_beta 90.00
_cell.angle_beta_esd ?
_cell.angle_gamma 120.00
_cell.angle_gamma_esd ?
_cell.entry_id 6DY9
_cell.details ?
_cell.formula_units_Z ?
_cell.length_a 46.221
_cell.length_a_esd ?
_cell.length_b 46.221
_cell.length_b_esd ?
_cell.length_c 43.426
_cell.length_c_esd ?
_cell.volume ?
_cell.volume_esd ?
_cell.Z_PDB 12
_cell.reciprocal_angle_alpha ?
_cell.reciprocal_angle_beta ?
_cell.reciprocal_angle_gamma ?
_cell.reciprocal_angle_alpha_esd ?
_cell.reciprocal_angle_beta_esd ?
_cell.reciprocal_angle_gamma_esd ?
_cell.reciprocal_length_a ?
_cell.reciprocal_length_b ?
_cell.reciprocal_length_c ?
_cell.reciprocal_length_a_esd ?
_cell.reciprocal_length_b_esd ?
_cell.reciprocal_length_c_esd ?
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 6DY9
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 169
_symmetry.space_group_name_Hall ?
_symmetry.space_group_name_H-M 'P 61'
_symmetry.pdbx_full_space_group_name_H-M ?
#
_exptl.absorpt_coefficient_mu ?
_exptl.absorpt_correction_T_max ?
_exptl.absorpt_correction_T_min ?
_exptl.absorpt_correction_type ?
_exptl.absorpt_process_details ?
_exptl.entry_id 6DY9
_exptl.crystals_number 1
_exptl.details ?
_exptl.method 'X-RAY DIFFRACTION'
_exptl.method_details ?
#
_exptl_crystal.colour ?
_exptl_crystal.density_diffrn ?
_exptl_crystal.density_Matthews 2.76
_exptl_crystal.density_method ?
_exptl_crystal.density_percent_sol 55.40
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.id 1
_exptl_crystal.preparation ?
_exptl_crystal.size_max ?
_exptl_crystal.size_mid ?
_exptl_crystal.size_min ?
_exptl_crystal.size_rad ?
_exptl_crystal.colour_lustre ?
_exptl_crystal.colour_modifier ?
_exptl_crystal.colour_primary ?
_exptl_crystal.density_meas ?
_exptl_crystal.density_meas_esd ?
_exptl_crystal.density_meas_gt ?
_exptl_crystal.density_meas_lt ?
_exptl_crystal.density_meas_temp ?
_exptl_crystal.density_meas_temp_esd ?
_exptl_crystal.density_meas_temp_gt ?
_exptl_crystal.density_meas_temp_lt ?
_exptl_crystal.pdbx_crystal_image_url ?
_exptl_crystal.pdbx_crystal_image_format ?
_exptl_crystal.pdbx_mosaicity ?
_exptl_crystal.pdbx_mosaicity_esd ?
#
_exptl_crystal_grow.apparatus ?
_exptl_crystal_grow.atmosphere ?
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.details ?
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.method_ref ?
_exptl_crystal_grow.pH ?
_exptl_crystal_grow.pressure ?
_exptl_crystal_grow.pressure_esd ?
_exptl_crystal_grow.seeding ?
_exptl_crystal_grow.seeding_ref ?
_exptl_crystal_grow.temp 294
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.temp_esd ?
_exptl_crystal_grow.time ?
_exptl_crystal_grow.pdbx_details
'1 mM ds DNA with 5 mM zinc acetate and 2 mM spermine was incubated against 55% (v/v) 2-methyl-2,4-pentanediol (MPD)'
_exptl_crystal_grow.pdbx_pH_range ?
#
_diffrn.ambient_environment ?
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.ambient_temp_esd ?
_diffrn.crystal_id 1
_diffrn.crystal_support ?
_diffrn.crystal_treatment ?
_diffrn.details ?
_diffrn.id 1
_diffrn.ambient_pressure ?
_diffrn.ambient_pressure_esd ?
_diffrn.ambient_pressure_gt ?
_diffrn.ambient_pressure_lt ?
_diffrn.ambient_temp_gt ?
_diffrn.ambient_temp_lt ?
_diffrn.pdbx_serial_crystal_experiment ?
#
_diffrn_detector.details ?
_diffrn_detector.detector CCD
_diffrn_detector.diffrn_id 1
_diffrn_detector.type 'MARMOSAIC 300 mm CCD'
_diffrn_detector.area_resol_mean ?
_diffrn_detector.dtime ?
_diffrn_detector.pdbx_frames_total ?
_diffrn_detector.pdbx_collection_time_total ?
_diffrn_detector.pdbx_collection_date 2014-05-29
_diffrn_detector.pdbx_frequency ?
#
_diffrn_radiation.collimation ?
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.filter_edge ?
_diffrn_radiation.inhomogeneity ?
_diffrn_radiation.monochromator ?
_diffrn_radiation.polarisn_norm ?
_diffrn_radiation.polarisn_ratio ?
_diffrn_radiation.probe ?
_diffrn_radiation.type ?
_diffrn_radiation.xray_symbol ?
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.pdbx_wavelength_list ?
_diffrn_radiation.pdbx_wavelength ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_analyzer ?
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 0.9786
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.current ?
_diffrn_source.details ?
_diffrn_source.diffrn_id 1
_diffrn_source.power ?
_diffrn_source.size ?
_diffrn_source.source SYNCHROTRON
_diffrn_source.target ?
_diffrn_source.type 'APS BEAMLINE 21-ID-G'
_diffrn_source.voltage ?
_diffrn_source.take-off_angle ?
_diffrn_source.pdbx_wavelength_list 0.9786
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_synchrotron_beamline 21-ID-G
_diffrn_source.pdbx_synchrotron_site APS
#
_reflns.B_iso_Wilson_estimate ?
_reflns.entry_id 6DY9
_reflns.data_reduction_details ?
_reflns.data_reduction_method ?
_reflns.d_resolution_high 2.21
_reflns.d_resolution_low 50
_reflns.details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.number_all ?
_reflns.number_obs 2702
_reflns.observed_criterion ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.observed_criterion_I_max ?
_reflns.observed_criterion_I_min ?
_reflns.observed_criterion_sigma_F ?
_reflns.observed_criterion_sigma_I ?
_reflns.percent_possible_obs 99.1
_reflns.R_free_details ?
_reflns.Rmerge_F_all ?
_reflns.Rmerge_F_obs ?
_reflns.Friedel_coverage ?
_reflns.number_gt ?
_reflns.threshold_expression ?
_reflns.pdbx_redundancy 6.1
_reflns.pdbx_Rmerge_I_obs 0.03
_reflns.pdbx_Rmerge_I_all ?
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_av_sigmaI ?
_reflns.pdbx_netI_over_sigmaI 55
_reflns.pdbx_res_netI_over_av_sigmaI_2 ?
_reflns.pdbx_res_netI_over_sigmaI_2 ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_d_res_high_opt ?
_reflns.pdbx_d_res_low_opt ?
_reflns.pdbx_d_res_opt_method ?
_reflns.phase_calculation_details ?
_reflns.pdbx_Rrim_I_all ?
_reflns.pdbx_Rpim_I_all ?
_reflns.pdbx_d_opt ?
_reflns.pdbx_number_measured_all ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
_reflns.pdbx_CC_half ?
_reflns.pdbx_R_split ?
#
_reflns_shell.d_res_high 2.21
_reflns_shell.d_res_low 2.25
_reflns_shell.meanI_over_sigI_all ?
_reflns_shell.meanI_over_sigI_obs ?
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_possible ?
_reflns_shell.number_unique_all ?
_reflns_shell.number_unique_obs 128
_reflns_shell.percent_possible_all 100
_reflns_shell.percent_possible_obs ?
_reflns_shell.Rmerge_F_all ?
_reflns_shell.Rmerge_F_obs ?
_reflns_shell.Rmerge_I_all ?
_reflns_shell.Rmerge_I_obs 0.78
_reflns_shell.meanI_over_sigI_gt ?
_reflns_shell.meanI_over_uI_all ?
_reflns_shell.meanI_over_uI_gt ?
_reflns_shell.number_measured_gt ?
_reflns_shell.number_unique_gt ?
_reflns_shell.percent_possible_gt ?
_reflns_shell.Rmerge_F_gt ?
_reflns_shell.Rmerge_I_gt ?
_reflns_shell.pdbx_redundancy 6.3
_reflns_shell.pdbx_Rsym_value ?
_reflns_shell.pdbx_chi_squared ?
_reflns_shell.pdbx_netI_over_sigmaI_all ?
_reflns_shell.pdbx_netI_over_sigmaI_obs ?
_reflns_shell.pdbx_Rrim_I_all ?
_reflns_shell.pdbx_Rpim_I_all ?
_reflns_shell.pdbx_rejects ?
_reflns_shell.pdbx_ordinal 1
_reflns_shell.pdbx_diffrn_id 1
_reflns_shell.pdbx_CC_half ?
_reflns_shell.pdbx_R_split ?
#
_refine.aniso_B[1][1] 0.39
_refine.aniso_B[1][2] 0.19
_refine.aniso_B[1][3] 0.00
_refine.aniso_B[2][2] 0.39
_refine.aniso_B[2][3] 0.00
_refine.aniso_B[3][3] -1.26
_refine.B_iso_max ?
_refine.B_iso_mean 63.165
_refine.B_iso_min ?
_refine.correlation_coeff_Fo_to_Fc 0.935
_refine.correlation_coeff_Fo_to_Fc_free 0.934
_refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS'
_refine.diff_density_max ?
_refine.diff_density_max_esd ?
_refine.diff_density_min ?
_refine.diff_density_min_esd ?
_refine.diff_density_rms ?
_refine.diff_density_rms_esd ?
_refine.entry_id 6DY9
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.ls_abs_structure_details ?
_refine.ls_abs_structure_Flack ?
_refine.ls_abs_structure_Flack_esd ?
_refine.ls_abs_structure_Rogers ?
_refine.ls_abs_structure_Rogers_esd ?
_refine.ls_d_res_high 2.30
_refine.ls_d_res_low 40.00
_refine.ls_extinction_coef ?
_refine.ls_extinction_coef_esd ?
_refine.ls_extinction_expression ?
_refine.ls_extinction_method ?
_refine.ls_goodness_of_fit_all ?
_refine.ls_goodness_of_fit_all_esd ?
_refine.ls_goodness_of_fit_obs ?
_refine.ls_goodness_of_fit_obs_esd ?
_refine.ls_hydrogen_treatment ?
_refine.ls_matrix_type ?
_refine.ls_number_constraints ?
_refine.ls_number_parameters ?
_refine.ls_number_reflns_all ?
_refine.ls_number_reflns_obs 2266
_refine.ls_number_reflns_R_free 111
_refine.ls_number_reflns_R_work ?
_refine.ls_number_restraints ?
_refine.ls_percent_reflns_obs 99.12
_refine.ls_percent_reflns_R_free 4.7
_refine.ls_R_factor_all ?
_refine.ls_R_factor_obs 0.25450
_refine.ls_R_factor_R_free 0.27582
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_R_factor_R_work 0.25346
_refine.ls_R_Fsqd_factor_obs ?
_refine.ls_R_I_factor_obs ?
_refine.ls_redundancy_reflns_all ?
_refine.ls_redundancy_reflns_obs ?
_refine.ls_restrained_S_all ?
_refine.ls_restrained_S_obs ?
_refine.ls_shift_over_esd_max ?
_refine.ls_shift_over_esd_mean ?
_refine.ls_structure_factor_coef ?
_refine.ls_weighting_details ?
_refine.ls_weighting_scheme ?
_refine.ls_wR_factor_all ?
_refine.ls_wR_factor_obs ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.occupancy_max ?
_refine.occupancy_min ?
_refine.solvent_model_details ?
_refine.solvent_model_param_bsol ?
_refine.solvent_model_param_ksol ?
_refine.ls_R_factor_gt ?
_refine.ls_goodness_of_fit_gt ?
_refine.ls_goodness_of_fit_ref ?
_refine.ls_shift_over_su_max ?
_refine.ls_shift_over_su_max_lt ?
_refine.ls_shift_over_su_mean ?
_refine.ls_shift_over_su_mean_lt ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F ?
_refine.pdbx_ls_sigma_Fsqd ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.pdbx_method_to_determine_struct SAD
_refine.pdbx_starting_model ?
_refine.pdbx_stereochemistry_target_values ?
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_overall_ESU_R 0.345
_refine.pdbx_overall_ESU_R_Free 0.245
_refine.pdbx_solvent_vdw_probe_radii 1.20
_refine.pdbx_solvent_ion_probe_radii 0.80
_refine.pdbx_solvent_shrinkage_radii 0.80
_refine.pdbx_real_space_R ?
_refine.pdbx_density_correlation ?
_refine.pdbx_pd_number_of_powder_patterns ?
_refine.pdbx_pd_number_of_points ?
_refine.pdbx_pd_meas_number_of_points ?
_refine.pdbx_pd_proc_ls_prof_R_factor ?
_refine.pdbx_pd_proc_ls_prof_wR_factor ?
_refine.pdbx_pd_Marquardt_correlation_coeff ?
_refine.pdbx_pd_Fsqrd_R_factor ?
_refine.pdbx_pd_ls_matrix_band_width ?
_refine.pdbx_overall_phase_error ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_diffrn_id 1
_refine.overall_SU_B 12.470
_refine.overall_SU_ML 0.219
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_average_fsc_overall ?
_refine.pdbx_average_fsc_work ?
_refine.pdbx_average_fsc_free ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id 1
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 322
_refine_hist.pdbx_number_atoms_ligand 2
_refine_hist.number_atoms_solvent 1
_refine_hist.number_atoms_total 325
_refine_hist.d_res_high 2.30
_refine_hist.d_res_low 40.00
#
loop_
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.criterion
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.number
_refine_ls_restr.rejects
_refine_ls_restr.type
_refine_ls_restr.weight
_refine_ls_restr.pdbx_restraint_function
'X-RAY DIFFRACTION' ? 0.002 0.011 362 ? r_bond_refined_d ? ?
'X-RAY DIFFRACTION' ? 0.025 0.020 180 ? r_bond_other_d ? ?
'X-RAY DIFFRACTION' ? 0.738 1.156 552 ? r_angle_refined_deg ? ?
'X-RAY DIFFRACTION' ? 2.293 3.000 424 ? r_angle_other_deg ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_1_deg ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_2_deg ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_3_deg ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_4_deg ? ?
'X-RAY DIFFRACTION' ? 0.066 0.200 48 ? r_chiral_restr ? ?
'X-RAY DIFFRACTION' ? 0.003 0.020 192 ? r_gen_planes_refined ? ?
'X-RAY DIFFRACTION' ? 0.001 0.020 84 ? r_gen_planes_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_mcbond_it ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_mcbond_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_mcangle_it ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_mcangle_other ? ?
'X-RAY DIFFRACTION' ? 1.230 6.526 362 ? r_scbond_it ? ?
'X-RAY DIFFRACTION' ? 1.231 6.527 361 ? r_scbond_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ?
'X-RAY DIFFRACTION' ? 1.227 9.780 552 ? r_scangle_other ? ?
'X-RAY DIFFRACTION' ? 2.389 68.983 464 ? r_long_range_B_refined ? ?
'X-RAY DIFFRACTION' ? 2.387 68.986 465 ? r_long_range_B_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ?
#
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_ls_shell.d_res_high 2.300
_refine_ls_shell.d_res_low 2.360
_refine_ls_shell.number_reflns_all ?
_refine_ls_shell.number_reflns_obs ?
_refine_ls_shell.number_reflns_R_free 8
_refine_ls_shell.number_reflns_R_work 169
_refine_ls_shell.percent_reflns_obs 100.00
_refine_ls_shell.percent_reflns_R_free ?
_refine_ls_shell.R_factor_all ?
_refine_ls_shell.R_factor_obs ?
_refine_ls_shell.R_factor_R_free 0.330
_refine_ls_shell.R_factor_R_free_error ?
_refine_ls_shell.R_factor_R_work 0.438
_refine_ls_shell.redundancy_reflns_all ?
_refine_ls_shell.redundancy_reflns_obs ?
_refine_ls_shell.wR_factor_all ?
_refine_ls_shell.wR_factor_obs ?
_refine_ls_shell.wR_factor_R_free ?
_refine_ls_shell.wR_factor_R_work ?
_refine_ls_shell.pdbx_total_number_of_bins_used 20
_refine_ls_shell.pdbx_phase_error ?
_refine_ls_shell.pdbx_fsc_work ?
_refine_ls_shell.pdbx_fsc_free ?
#
_struct.entry_id 6DY9
_struct.title 'Crystal structure of double-stranded DNA GGGATCCC; crystals grown in Zn2+'
_struct.pdbx_model_details ?
_struct.pdbx_formula_weight ?
_struct.pdbx_formula_weight_method ?
_struct.pdbx_model_type_details ?
_struct.pdbx_CASP_flag N
#
_struct_keywords.entry_id 6DY9
_struct_keywords.text 'palindrome, mithramycin binding, gunine N7-Zn2+, DNA'
_struct_keywords.pdbx_keywords DNA
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 1 ?
C N N 2 ?
D N N 2 ?
E N N 3 ?
#
_struct_ref.id 1
_struct_ref.db_name PDB
_struct_ref.db_code 6DY9
_struct_ref.pdbx_db_accession 6DY9
_struct_ref.pdbx_db_isoform ?
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_align_begin 1
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.pdbx_PDB_id_code
_struct_ref_seq.pdbx_strand_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.pdbx_seq_align_beg_ins_code
_struct_ref_seq.seq_align_end
_struct_ref_seq.pdbx_seq_align_end_ins_code
_struct_ref_seq.pdbx_db_accession
_struct_ref_seq.db_align_beg
_struct_ref_seq.pdbx_db_align_beg_ins_code
_struct_ref_seq.db_align_end
_struct_ref_seq.pdbx_db_align_end_ins_code
_struct_ref_seq.pdbx_auth_seq_align_beg
_struct_ref_seq.pdbx_auth_seq_align_end
1 1 6DY9 A 1 ? 8 ? 6DY9 1 ? 8 ? 1 8
2 1 6DY9 B 1 ? 8 ? 6DY9 9 ? 16 ? 9 16
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_and_software_defined_assembly
_pdbx_struct_assembly.method_details PISA
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
loop_
_pdbx_struct_assembly_prop.biol_id
_pdbx_struct_assembly_prop.type
_pdbx_struct_assembly_prop.value
_pdbx_struct_assembly_prop.details
1 'ABSA (A^2)' 930 ?
1 MORE -52 ?
1 'SSA (A^2)' 3130 ?
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E
#
_pdbx_struct_assembly_auth_evidence.id 1
_pdbx_struct_assembly_auth_evidence.assembly_id 1
_pdbx_struct_assembly_auth_evidence.experimental_support none
_pdbx_struct_assembly_auth_evidence.details 'double-stranded DNA'
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
metalc1 metalc ? ? A DG 3 N7 ? ? ? 1_555 C ZN . ZN ? ? A DG 3 A ZN 101 1_555 ? ? ? ? ? ? ? 2.071 ? ?
metalc2 metalc ? ? B DG 1 N7 ? ? ? 1_555 D ZN . ZN ? ? B DG 9 B ZN 101 1_555 ? ? ? ? ? ? ? 2.072 ? ?
hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 B DC 8 N3 ? ? A DG 1 B DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 B DC 8 O2 ? ? A DG 1 B DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 B DC 8 N4 ? ? A DG 1 B DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog4 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 7 N3 ? ? A DG 2 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog5 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 7 O2 ? ? A DG 2 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog6 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 7 N4 ? ? A DG 2 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog7 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 6 N3 ? ? A DG 3 B DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog8 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 6 O2 ? ? A DG 3 B DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog9 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 6 N4 ? ? A DG 3 B DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog10 hydrog ? ? A DA 4 N1 ? ? ? 1_555 B DT 5 N3 ? ? A DA 4 B DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog11 hydrog ? ? A DA 4 N6 ? ? ? 1_555 B DT 5 O4 ? ? A DA 4 B DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog12 hydrog ? ? A DT 5 N3 ? ? ? 1_555 B DA 4 N1 ? ? A DT 5 B DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog13 hydrog ? ? A DT 5 O4 ? ? ? 1_555 B DA 4 N6 ? ? A DT 5 B DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog14 hydrog ? ? A DC 6 N3 ? ? ? 1_555 B DG 3 N1 ? ? A DC 6 B DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog15 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B DG 3 O6 ? ? A DC 6 B DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog16 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B DG 3 N2 ? ? A DC 6 B DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog17 hydrog ? ? A DC 7 N3 ? ? ? 1_555 B DG 2 N1 ? ? A DC 7 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog18 hydrog ? ? A DC 7 N4 ? ? ? 1_555 B DG 2 O6 ? ? A DC 7 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog19 hydrog ? ? A DC 7 O2 ? ? ? 1_555 B DG 2 N2 ? ? A DC 7 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog20 hydrog ? ? A DC 8 N3 ? ? ? 1_555 B DG 1 N1 ? ? A DC 8 B DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog21 hydrog ? ? A DC 8 N4 ? ? ? 1_555 B DG 1 O6 ? ? A DC 8 B DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog22 hydrog ? ? A DC 8 O2 ? ? ? 1_555 B DG 1 N2 ? ? A DC 8 B DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
metalc ? ?
hydrog ? ?
#
loop_
_struct_site.id
_struct_site.pdbx_evidence_code
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_struct_site.pdbx_auth_ins_code
_struct_site.pdbx_num_residues
_struct_site.details
AC1 Software A ZN 101 ? 1 'binding site for residue ZN A 101'
AC2 Software B ZN 101 ? 1 'binding site for residue ZN B 101'
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 1 DG A 3 ? DG A 3 . ? 1_555 ?
2 AC2 1 DG B 1 ? DG B 9 . ? 1_555 ?
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
DA OP3 O N N 1
DA P P N N 2
DA OP1 O N N 3
DA OP2 O N N 4
DA "O5'" O N N 5
DA "C5'" C N N 6
DA "C4'" C N R 7
DA "O4'" O N N 8
DA "C3'" C N S 9
DA "O3'" O N N 10
DA "C2'" C N N 11
DA "C1'" C N R 12
DA N9 N Y N 13
DA C8 C Y N 14
DA N7 N Y N 15
DA C5 C Y N 16
DA C6 C Y N 17
DA N6 N N N 18
DA N1 N Y N 19
DA C2 C Y N 20
DA N3 N Y N 21
DA C4 C Y N 22
DA HOP3 H N N 23
DA HOP2 H N N 24
DA "H5'" H N N 25
DA "H5''" H N N 26
DA "H4'" H N N 27
DA "H3'" H N N 28
DA "HO3'" H N N 29
DA "H2'" H N N 30
DA "H2''" H N N 31
DA "H1'" H N N 32
DA H8 H N N 33
DA H61 H N N 34
DA H62 H N N 35
DA H2 H N N 36
DC OP3 O N N 37
DC P P N N 38
DC OP1 O N N 39
DC OP2 O N N 40
DC "O5'" O N N 41
DC "C5'" C N N 42
DC "C4'" C N R 43
DC "O4'" O N N 44
DC "C3'" C N S 45
DC "O3'" O N N 46
DC "C2'" C N N 47
DC "C1'" C N R 48
DC N1 N N N 49
DC C2 C N N 50
DC O2 O N N 51
DC N3 N N N 52
DC C4 C N N 53
DC N4 N N N 54
DC C5 C N N 55
DC C6 C N N 56
DC HOP3 H N N 57
DC HOP2 H N N 58
DC "H5'" H N N 59
DC "H5''" H N N 60
DC "H4'" H N N 61
DC "H3'" H N N 62
DC "HO3'" H N N 63
DC "H2'" H N N 64
DC "H2''" H N N 65
DC "H1'" H N N 66
DC H41 H N N 67
DC H42 H N N 68
DC H5 H N N 69
DC H6 H N N 70
DG OP3 O N N 71
DG P P N N 72
DG OP1 O N N 73
DG OP2 O N N 74
DG "O5'" O N N 75
DG "C5'" C N N 76
DG "C4'" C N R 77
DG "O4'" O N N 78
DG "C3'" C N S 79
DG "O3'" O N N 80
DG "C2'" C N N 81
DG "C1'" C N R 82
DG N9 N Y N 83
DG C8 C Y N 84
DG N7 N Y N 85
DG C5 C Y N 86
DG C6 C N N 87
DG O6 O N N 88
DG N1 N N N 89
DG C2 C N N 90
DG N2 N N N 91
DG N3 N N N 92
DG C4 C Y N 93
DG HOP3 H N N 94
DG HOP2 H N N 95
DG "H5'" H N N 96
DG "H5''" H N N 97
DG "H4'" H N N 98
DG "H3'" H N N 99
DG "HO3'" H N N 100
DG "H2'" H N N 101
DG "H2''" H N N 102
DG "H1'" H N N 103
DG H8 H N N 104
DG H1 H N N 105
DG H21 H N N 106
DG H22 H N N 107
DT OP3 O N N 108
DT P P N N 109
DT OP1 O N N 110
DT OP2 O N N 111
DT "O5'" O N N 112
DT "C5'" C N N 113
DT "C4'" C N R 114
DT "O4'" O N N 115
DT "C3'" C N S 116
DT "O3'" O N N 117
DT "C2'" C N N 118
DT "C1'" C N R 119
DT N1 N N N 120
DT C2 C N N 121
DT O2 O N N 122
DT N3 N N N 123
DT C4 C N N 124
DT O4 O N N 125
DT C5 C N N 126
DT C7 C N N 127
DT C6 C N N 128
DT HOP3 H N N 129
DT HOP2 H N N 130
DT "H5'" H N N 131
DT "H5''" H N N 132
DT "H4'" H N N 133
DT "H3'" H N N 134
DT "HO3'" H N N 135
DT "H2'" H N N 136
DT "H2''" H N N 137
DT "H1'" H N N 138
DT H3 H N N 139
DT H71 H N N 140
DT H72 H N N 141
DT H73 H N N 142
DT H6 H N N 143
HOH O O N N 144
HOH H1 H N N 145
HOH H2 H N N 146
ZN ZN ZN N N 147
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DA OP3 P sing N N 1
DA OP3 HOP3 sing N N 2
DA P OP1 doub N N 3
DA P OP2 sing N N 4
DA P "O5'" sing N N 5
DA OP2 HOP2 sing N N 6
DA "O5'" "C5'" sing N N 7
DA "C5'" "C4'" sing N N 8
DA "C5'" "H5'" sing N N 9
DA "C5'" "H5''" sing N N 10
DA "C4'" "O4'" sing N N 11
DA "C4'" "C3'" sing N N 12
DA "C4'" "H4'" sing N N 13
DA "O4'" "C1'" sing N N 14
DA "C3'" "O3'" sing N N 15
DA "C3'" "C2'" sing N N 16
DA "C3'" "H3'" sing N N 17
DA "O3'" "HO3'" sing N N 18
DA "C2'" "C1'" sing N N 19
DA "C2'" "H2'" sing N N 20
DA "C2'" "H2''" sing N N 21
DA "C1'" N9 sing N N 22
DA "C1'" "H1'" sing N N 23
DA N9 C8 sing Y N 24
DA N9 C4 sing Y N 25
DA C8 N7 doub Y N 26
DA C8 H8 sing N N 27
DA N7 C5 sing Y N 28
DA C5 C6 sing Y N 29
DA C5 C4 doub Y N 30
DA C6 N6 sing N N 31
DA C6 N1 doub Y N 32
DA N6 H61 sing N N 33
DA N6 H62 sing N N 34
DA N1 C2 sing Y N 35
DA C2 N3 doub Y N 36
DA C2 H2 sing N N 37
DA N3 C4 sing Y N 38
DC OP3 P sing N N 39
DC OP3 HOP3 sing N N 40
DC P OP1 doub N N 41
DC P OP2 sing N N 42
DC P "O5'" sing N N 43
DC OP2 HOP2 sing N N 44
DC "O5'" "C5'" sing N N 45
DC "C5'" "C4'" sing N N 46
DC "C5'" "H5'" sing N N 47
DC "C5'" "H5''" sing N N 48
DC "C4'" "O4'" sing N N 49
DC "C4'" "C3'" sing N N 50
DC "C4'" "H4'" sing N N 51
DC "O4'" "C1'" sing N N 52
DC "C3'" "O3'" sing N N 53
DC "C3'" "C2'" sing N N 54
DC "C3'" "H3'" sing N N 55
DC "O3'" "HO3'" sing N N 56
DC "C2'" "C1'" sing N N 57
DC "C2'" "H2'" sing N N 58
DC "C2'" "H2''" sing N N 59
DC "C1'" N1 sing N N 60
DC "C1'" "H1'" sing N N 61
DC N1 C2 sing N N 62
DC N1 C6 sing N N 63
DC C2 O2 doub N N 64
DC C2 N3 sing N N 65
DC N3 C4 doub N N 66
DC C4 N4 sing N N 67
DC C4 C5 sing N N 68
DC N4 H41 sing N N 69
DC N4 H42 sing N N 70
DC C5 C6 doub N N 71
DC C5 H5 sing N N 72
DC C6 H6 sing N N 73
DG OP3 P sing N N 74
DG OP3 HOP3 sing N N 75
DG P OP1 doub N N 76
DG P OP2 sing N N 77
DG P "O5'" sing N N 78
DG OP2 HOP2 sing N N 79
DG "O5'" "C5'" sing N N 80
DG "C5'" "C4'" sing N N 81
DG "C5'" "H5'" sing N N 82
DG "C5'" "H5''" sing N N 83
DG "C4'" "O4'" sing N N 84
DG "C4'" "C3'" sing N N 85
DG "C4'" "H4'" sing N N 86
DG "O4'" "C1'" sing N N 87
DG "C3'" "O3'" sing N N 88
DG "C3'" "C2'" sing N N 89
DG "C3'" "H3'" sing N N 90
DG "O3'" "HO3'" sing N N 91
DG "C2'" "C1'" sing N N 92
DG "C2'" "H2'" sing N N 93
DG "C2'" "H2''" sing N N 94
DG "C1'" N9 sing N N 95
DG "C1'" "H1'" sing N N 96
DG N9 C8 sing Y N 97
DG N9 C4 sing Y N 98
DG C8 N7 doub Y N 99
DG C8 H8 sing N N 100
DG N7 C5 sing Y N 101
DG C5 C6 sing N N 102
DG C5 C4 doub Y N 103
DG C6 O6 doub N N 104
DG C6 N1 sing N N 105
DG N1 C2 sing N N 106
DG N1 H1 sing N N 107
DG C2 N2 sing N N 108
DG C2 N3 doub N N 109
DG N2 H21 sing N N 110
DG N2 H22 sing N N 111
DG N3 C4 sing N N 112
DT OP3 P sing N N 113
DT OP3 HOP3 sing N N 114
DT P OP1 doub N N 115
DT P OP2 sing N N 116
DT P "O5'" sing N N 117
DT OP2 HOP2 sing N N 118
DT "O5'" "C5'" sing N N 119
DT "C5'" "C4'" sing N N 120
DT "C5'" "H5'" sing N N 121
DT "C5'" "H5''" sing N N 122
DT "C4'" "O4'" sing N N 123
DT "C4'" "C3'" sing N N 124
DT "C4'" "H4'" sing N N 125
DT "O4'" "C1'" sing N N 126
DT "C3'" "O3'" sing N N 127
DT "C3'" "C2'" sing N N 128
DT "C3'" "H3'" sing N N 129
DT "O3'" "HO3'" sing N N 130
DT "C2'" "C1'" sing N N 131
DT "C2'" "H2'" sing N N 132
DT "C2'" "H2''" sing N N 133
DT "C1'" N1 sing N N 134
DT "C1'" "H1'" sing N N 135
DT N1 C2 sing N N 136
DT N1 C6 sing N N 137
DT C2 O2 doub N N 138
DT C2 N3 sing N N 139
DT N3 C4 sing N N 140
DT N3 H3 sing N N 141
DT C4 O4 doub N N 142
DT C4 C5 sing N N 143
DT C5 C7 sing N N 144
DT C5 C6 doub N N 145
DT C7 H71 sing N N 146
DT C7 H72 sing N N 147
DT C7 H73 sing N N 148
DT C6 H6 sing N N 149
HOH O H1 sing N N 150
HOH O H2 sing N N 151
#
_ndb_struct_conf_na.entry_id 6DY9
_ndb_struct_conf_na.feature 'a-form double helix'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A DG 1 1_555 B DC 8 1_555 -0.698 -0.198 -0.268 -10.688 -9.520 -2.795 1 A_DG1:DC16_B A 1 ? B 16 ? 19 1
1 A DG 2 1_555 B DC 7 1_555 -0.430 -0.227 -0.389 -3.301 -6.430 -0.917 2 A_DG2:DC15_B A 2 ? B 15 ? 19 1
1 A DG 3 1_555 B DC 6 1_555 -0.301 0.002 -0.883 -16.183 -13.759 4.218 3 A_DG3:DC14_B A 3 ? B 14 ? 19 1
1 A DA 4 1_555 B DT 5 1_555 -0.100 0.027 -0.375 -25.910 -1.886 3.779 4 A_DA4:DT13_B A 4 ? B 13 ? 20 1
1 A DT 5 1_555 B DA 4 1_555 0.018 -0.045 -0.035 3.224 -8.922 0.883 5 A_DT5:DA12_B A 5 ? B 12 ? 20 1
1 A DC 6 1_555 B DG 3 1_555 0.320 -0.055 -0.442 8.854 -11.803 1.079 6 A_DC6:DG11_B A 6 ? B 11 ? 19 1
1 A DC 7 1_555 B DG 2 1_555 0.429 0.016 -0.406 6.521 -0.942 0.079 7 A_DC7:DG10_B A 7 ? B 10 ? 19 1
1 A DC 8 1_555 B DG 1 1_555 0.460 -0.062 -0.570 19.365 0.733 3.897 8 A_DC8:DG9_B A 8 ? B 9 ? 19 1
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A DG 1 1_555 B DC 8 1_555 A DG 2 1_555 B DC 7 1_555 -0.157 -1.433 3.113 -1.578 8.216 32.264 -3.734 0.038 2.682 14.483 2.782
33.303 1 AA_DG1DG2:DC15DC16_BB A 1 ? B 16 ? A 2 ? B 15 ?
1 A DG 2 1_555 B DC 7 1_555 A DG 3 1_555 B DC 6 1_555 0.621 -1.832 3.788 2.509 10.376 32.374 -4.918 -0.628 3.108 18.008 -4.355
34.044 2 AA_DG2DG3:DC14DC15_BB A 2 ? B 15 ? A 3 ? B 14 ?
1 A DG 3 1_555 B DC 6 1_555 A DA 4 1_555 B DT 5 1_555 -0.281 -1.833 3.630 -4.213 13.510 31.484 -5.214 -0.186 2.659 23.470 7.320
34.445 3 AA_DG3DA4:DT13DC14_BB A 3 ? B 14 ? A 4 ? B 13 ?
1 A DA 4 1_555 B DT 5 1_555 A DT 5 1_555 B DA 4 1_555 -0.128 -0.869 2.646 -0.833 2.610 28.323 -2.245 0.109 2.560 5.319 1.697
28.453 4 AA_DA4DT5:DA12DT13_BB A 4 ? B 13 ? A 5 ? B 12 ?
1 A DT 5 1_555 B DA 4 1_555 A DC 6 1_555 B DG 3 1_555 0.039 -1.305 3.181 3.081 8.799 31.981 -3.634 0.406 2.728 15.562 -5.449
33.278 5 AA_DT5DC6:DG11DA12_BB A 5 ? B 12 ? A 6 ? B 11 ?
1 A DC 6 1_555 B DG 3 1_555 A DC 7 1_555 B DG 2 1_555 0.356 -1.796 3.642 -0.663 4.881 29.909 -4.488 -0.825 3.305 9.377 1.273
30.303 6 AA_DC6DC7:DG10DG11_BB A 6 ? B 11 ? A 7 ? B 10 ?
1 A DC 7 1_555 B DG 2 1_555 A DC 8 1_555 B DG 1 1_555 -0.292 -1.969 3.124 0.460 4.476 26.720 -5.229 0.729 2.758 9.599 -0.986
27.090 7 AA_DC7DC8:DG9DG10_BB A 7 ? B 10 ? A 8 ? B 9 ?
#
_pdbx_audit_support.funding_organization 'Department of Defense (DOD, United States)'
_pdbx_audit_support.country 'United States'
_pdbx_audit_support.grant_number PC150300P1
_pdbx_audit_support.ordinal 1
#
_atom_sites.entry_id 6DY9
_atom_sites.fract_transf_matrix[1][1] 0.021635
_atom_sites.fract_transf_matrix[1][2] 0.012491
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.024982
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.023028
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
N
O
P
ZN
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 O "O5'" . DG A 1 1 ? -15.709 -13.405 -4.177 1.00 70.83 ? 1 DG A "O5'" 1
ATOM 2 C "C5'" . DG A 1 1 ? -17.064 -13.156 -3.756 1.00 70.22 ? 1 DG A "C5'" 1
ATOM 3 C "C4'" . DG A 1 1 ? -17.430 -14.043 -2.587 1.00 69.78 ? 1 DG A "C4'" 1
ATOM 4 O "O4'" . DG A 1 1 ? -16.289 -14.250 -1.719 1.00 69.12 ? 1 DG A "O4'" 1
ATOM 5 C "C3'" . DG A 1 1 ? -18.527 -13.494 -1.680 1.00 69.66 ? 1 DG A "C3'" 1
ATOM 6 O "O3'" . DG A 1 1 ? -19.821 -13.838 -2.185 1.00 70.17 ? 1 DG A "O3'" 1
ATOM 7 C "C2'" . DG A 1 1 ? -18.200 -14.143 -0.350 1.00 69.26 ? 1 DG A "C2'" 1
ATOM 8 C "C1'" . DG A 1 1 ? -16.680 -14.081 -0.357 1.00 68.97 ? 1 DG A "C1'" 1
ATOM 9 N N9 . DG A 1 1 ? -16.147 -12.804 0.106 1.00 68.84 ? 1 DG A N9 1
ATOM 10 C C8 . DG A 1 1 ? -15.482 -11.869 -0.650 1.00 68.89 ? 1 DG A C8 1
ATOM 11 N N7 . DG A 1 1 ? -15.134 -10.812 0.032 1.00 68.76 ? 1 DG A N7 1
ATOM 12 C C5 . DG A 1 1 ? -15.602 -11.060 1.314 1.00 68.72 ? 1 DG A C5 1
ATOM 13 C C6 . DG A 1 1 ? -15.523 -10.269 2.490 1.00 68.73 ? 1 DG A C6 1
ATOM 14 O O6 . DG A 1 1 ? -15.005 -9.155 2.637 1.00 68.68 ? 1 DG A O6 1
ATOM 15 N N1 . DG A 1 1 ? -16.127 -10.900 3.573 1.00 68.54 ? 1 DG A N1 1
ATOM 16 C C2 . DG A 1 1 ? -16.736 -12.130 3.531 1.00 68.39 ? 1 DG A C2 1
ATOM 17 N N2 . DG A 1 1 ? -17.264 -12.569 4.683 1.00 68.38 ? 1 DG A N2 1
ATOM 18 N N3 . DG A 1 1 ? -16.817 -12.878 2.441 1.00 68.57 ? 1 DG A N3 1
ATOM 19 C C4 . DG A 1 1 ? -16.233 -12.284 1.377 1.00 68.78 ? 1 DG A C4 1
ATOM 20 P P . DG A 1 2 ? -20.927 -12.701 -2.395 1.00 70.95 ? 2 DG A P 1
ATOM 21 O OP1 . DG A 1 2 ? -22.014 -13.269 -3.233 1.00 71.55 ? 2 DG A OP1 1
ATOM 22 O OP2 . DG A 1 2 ? -20.240 -11.459 -2.831 1.00 70.73 ? 2 DG A OP2 1
ATOM 23 O "O5'" . DG A 1 2 ? -21.499 -12.489 -0.924 1.00 71.36 ? 2 DG A "O5'" 1
ATOM 24 C "C5'" . DG A 1 2 ? -22.138 -13.577 -0.232 1.00 71.86 ? 2 DG A "C5'" 1
ATOM 25 C "C4'" . DG A 1 2 ? -22.254 -13.293 1.248 1.00 72.30 ? 2 DG A "C4'" 1
ATOM 26 O "O4'" . DG A 1 2 ? -20.947 -13.234 1.867 1.00 71.63 ? 2 DG A "O4'" 1
ATOM 27 C "C3'" . DG A 1 2 ? -22.901 -11.969 1.629 1.00 73.15 ? 2 DG A "C3'" 1
ATOM 28 O "O3'" . DG A 1 2 ? -24.326 -11.970 1.509 1.00 75.48 ? 2 DG A "O3'" 1
ATOM 29 C "C2'" . DG A 1 2 ? -22.425 -11.811 3.058 1.00 72.32 ? 2 DG A "C2'" 1
ATOM 30 C "C1'" . DG A 1 2 ? -20.981 -12.288 2.941 1.00 71.00 ? 2 DG A "C1'" 1
ATOM 31 N N9 . DG A 1 2 ? -20.064 -11.200 2.619 1.00 69.10 ? 2 DG A N9 1
ATOM 32 C C8 . DG A 1 2 ? -19.496 -10.918 1.399 1.00 68.23 ? 2 DG A C8 1
ATOM 33 N N7 . DG A 1 2 ? -18.738 -9.856 1.422 1.00 67.65 ? 2 DG A N7 1
ATOM 34 C C5 . DG A 1 2 ? -18.823 -9.400 2.730 1.00 67.33 ? 2 DG A C5 1
ATOM 35 C C6 . DG A 1 2 ? -18.213 -8.282 3.356 1.00 66.58 ? 2 DG A C6 1
ATOM 36 O O6 . DG A 1 2 ? -17.452 -7.441 2.861 1.00 66.35 ? 2 DG A O6 1
ATOM 37 N N1 . DG A 1 2 ? -18.569 -8.189 4.698 1.00 66.15 ? 2 DG A N1 1
ATOM 38 C C2 . DG A 1 2 ? -19.404 -9.059 5.355 1.00 66.33 ? 2 DG A C2 1
ATOM 39 N N2 . DG A 1 2 ? -19.627 -8.802 6.653 1.00 66.38 ? 2 DG A N2 1
ATOM 40 N N3 . DG A 1 2 ? -19.977 -10.106 4.784 1.00 67.21 ? 2 DG A N3 1
ATOM 41 C C4 . DG A 1 2 ? -19.644 -10.215 3.480 1.00 67.95 ? 2 DG A C4 1
ATOM 42 P P . DG A 1 3 ? -25.093 -10.597 1.206 1.00 77.96 ? 3 DG A P 1
ATOM 43 O OP1 . DG A 1 3 ? -26.550 -10.885 1.168 1.00 78.58 ? 3 DG A OP1 1
ATOM 44 O OP2 . DG A 1 3 ? -24.443 -9.957 0.032 1.00 77.46 ? 3 DG A OP2 1
ATOM 45 O "O5'" . DG A 1 3 ? -24.781 -9.716 2.498 1.00 77.34 ? 3 DG A "O5'" 1
ATOM 46 C "C5'" . DG A 1 3 ? -25.596 -9.834 3.679 1.00 77.34 ? 3 DG A "C5'" 1
ATOM 47 C "C4'" . DG A 1 3 ? -25.050 -8.995 4.812 1.00 77.19 ? 3 DG A "C4'" 1
ATOM 48 O "O4'" . DG A 1 3 ? -23.609 -9.092 4.896 1.00 77.33 ? 3 DG A "O4'" 1
ATOM 49 C "C3'" . DG A 1 3 ? -25.314 -7.499 4.717 1.00 76.75 ? 3 DG A "C3'" 1
ATOM 50 O "O3'" . DG A 1 3 ? -26.653 -7.143 5.075 1.00 75.42 ? 3 DG A "O3'" 1
ATOM 51 C "C2'" . DG A 1 3 ? -24.278 -6.954 5.678 1.00 77.21 ? 3 DG A "C2'" 1
ATOM 52 C "C1'" . DG A 1 3 ? -23.081 -7.852 5.378 1.00 77.53 ? 3 DG A "C1'" 1
ATOM 53 N N9 . DG A 1 3 ? -22.209 -7.297 4.348 1.00 78.01 ? 3 DG A N9 1
ATOM 54 C C8 . DG A 1 3 ? -22.032 -7.757 3.065 1.00 78.85 ? 3 DG A C8 1
ATOM 55 N N7 . DG A 1 3 ? -21.200 -7.029 2.372 1.00 82.37 ? 3 DG A N7 1
ATOM 56 C C5 . DG A 1 3 ? -20.813 -6.022 3.245 1.00 77.94 ? 3 DG A C5 1
ATOM 57 C C6 . DG A 1 3 ? -19.922 -4.934 3.056 1.00 77.12 ? 3 DG A C6 1
ATOM 58 O O6 . DG A 1 3 ? -19.275 -4.633 2.046 1.00 76.56 ? 3 DG A O6 1
ATOM 59 N N1 . DG A 1 3 ? -19.818 -4.153 4.203 1.00 76.69 ? 3 DG A N1 1
ATOM 60 C C2 . DG A 1 3 ? -20.486 -4.387 5.380 1.00 76.85 ? 3 DG A C2 1
ATOM 61 N N2 . DG A 1 3 ? -20.253 -3.521 6.376 1.00 77.22 ? 3 DG A N2 1
ATOM 62 N N3 . DG A 1 3 ? -21.317 -5.399 5.569 1.00 77.03 ? 3 DG A N3 1
ATOM 63 C C4 . DG A 1 3 ? -21.432 -6.170 4.467 1.00 77.76 ? 3 DG A C4 1
ATOM 64 P P . DA A 1 4 ? -27.300 -5.799 4.491 1.00 73.42 ? 4 DA A P 1
ATOM 65 O OP1 . DA A 1 4 ? -28.671 -5.668 5.048 1.00 74.40 ? 4 DA A OP1 1
ATOM 66 O OP2 . DA A 1 4 ? -27.103 -5.793 3.019 1.00 72.56 ? 4 DA A OP2 1
ATOM 67 O "O5'" . DA A 1 4 ? -26.381 -4.658 5.115 1.00 70.66 ? 4 DA A "O5'" 1
ATOM 68 C "C5'" . DA A 1 4 ? -26.422 -4.355 6.523 1.00 67.94 ? 4 DA A "C5'" 1
ATOM 69 C "C4'" . DA A 1 4 ? -25.873 -2.970 6.778 1.00 66.07 ? 4 DA A "C4'" 1
ATOM 70 O "O4'" . DA A 1 4 ? -24.447 -2.956 6.544 1.00 65.12 ? 4 DA A "O4'" 1
ATOM 71 C "C3'" . DA A 1 4 ? -26.432 -1.878 5.874 1.00 65.14 ? 4 DA A "C3'" 1
ATOM 72 O "O3'" . DA A 1 4 ? -27.644 -1.343 6.414 1.00 64.68 ? 4 DA A "O3'" 1
ATOM 73 C "C2'" . DA A 1 4 ? -25.313 -0.855 5.857 1.00 64.58 ? 4 DA A "C2'" 1
ATOM 74 C "C1'" . DA A 1 4 ? -24.052 -1.703 5.991 1.00 64.05 ? 4 DA A "C1'" 1
ATOM 75 N N9 . DA A 1 4 ? -23.364 -1.964 4.726 1.00 62.71 ? 4 DA A N9 1
ATOM 76 C C8 . DA A 1 4 ? -23.425 -3.091 3.945 1.00 62.06 ? 4 DA A C8 1
ATOM 77 N N7 . DA A 1 4 ? -22.687 -3.025 2.863 1.00 61.60 ? 4 DA A N7 1
ATOM 78 C C5 . DA A 1 4 ? -22.101 -1.769 2.936 1.00 61.49 ? 4 DA A C5 1
ATOM 79 C C6 . DA A 1 4 ? -21.206 -1.091 2.089 1.00 61.43 ? 4 DA A C6 1
ATOM 80 N N6 . DA A 1 4 ? -20.727 -1.606 0.954 1.00 61.52 ? 4 DA A N6 1
ATOM 81 N N1 . DA A 1 4 ? -20.817 0.151 2.452 1.00 61.39 ? 4 DA A N1 1
ATOM 82 C C2 . DA A 1 4 ? -21.297 0.667 3.591 1.00 61.28 ? 4 DA A C2 1
ATOM 83 N N3 . DA A 1 4 ? -22.145 0.130 4.467 1.00 61.63 ? 4 DA A N3 1
ATOM 84 C C4 . DA A 1 4 ? -22.509 -1.104 4.078 1.00 61.90 ? 4 DA A C4 1
ATOM 85 P P . DT A 1 5 ? -28.685 -0.602 5.456 1.00 64.59 ? 5 DT A P 1
ATOM 86 O OP1 . DT A 1 5 ? -29.850 -0.192 6.280 1.00 65.04 ? 5 DT A OP1 1
ATOM 87 O OP2 . DT A 1 5 ? -28.898 -1.455 4.259 1.00 64.10 ? 5 DT A OP2 1
ATOM 88 O "O5'" . DT A 1 5 ? -27.889 0.703 5.007 1.00 63.66 ? 5 DT A "O5'" 1
ATOM 89 C "C5'" . DT A 1 5 ? -28.099 1.960 5.674 1.00 62.94 ? 5 DT A "C5'" 1
ATOM 90 C "C4'" . DT A 1 5 ? -26.998 2.941 5.340 1.00 62.55 ? 5 DT A "C4'" 1
ATOM 91 O "O4'" . DT A 1 5 ? -25.755 2.258 5.067 1.00 62.03 ? 5 DT A "O4'" 1
ATOM 92 C "C3'" . DT A 1 5 ? -27.238 3.792 4.101 1.00 62.71 ? 5 DT A "C3'" 1
ATOM 93 O "O3'" . DT A 1 5 ? -28.115 4.889 4.370 1.00 63.72 ? 5 DT A "O3'" 1
ATOM 94 C "C2'" . DT A 1 5 ? -25.833 4.240 3.754 1.00 62.33 ? 5 DT A "C2'" 1
ATOM 95 C "C1'" . DT A 1 5 ? -24.979 3.039 4.155 1.00 61.71 ? 5 DT A "C1'" 1
ATOM 96 N N1 . DT A 1 5 ? -24.595 2.178 3.018 1.00 60.80 ? 5 DT A N1 1
ATOM 97 C C2 . DT A 1 5 ? -23.499 2.550 2.271 1.00 60.46 ? 5 DT A C2 1
ATOM 98 O O2 . DT A 1 5 ? -22.828 3.539 2.517 1.00 60.34 ? 5 DT A O2 1
ATOM 99 N N3 . DT A 1 5 ? -23.207 1.708 1.226 1.00 60.16 ? 5 DT A N3 1
ATOM 100 C C4 . DT A 1 5 ? -23.893 0.565 0.857 1.00 59.96 ? 5 DT A C4 1
ATOM 101 O O4 . DT A 1 5 ? -23.511 -0.092 -0.107 1.00 60.01 ? 5 DT A O4 1
ATOM 102 C C5 . DT A 1 5 ? -25.037 0.241 1.679 1.00 59.87 ? 5 DT A C5 1
ATOM 103 C C7 . DT A 1 5 ? -25.842 -0.978 1.356 1.00 59.86 ? 5 DT A C7 1
ATOM 104 C C6 . DT A 1 5 ? -25.331 1.057 2.699 1.00 60.23 ? 5 DT A C6 1
ATOM 105 P P . DC A 1 6 ? -29.028 5.485 3.200 1.00 64.72 ? 6 DC A P 1
ATOM 106 O OP1 . DC A 1 6 ? -29.941 6.493 3.797 1.00 65.07 ? 6 DC A OP1 1
ATOM 107 O OP2 . DC A 1 6 ? -29.588 4.348 2.425 1.00 64.53 ? 6 DC A OP2 1
ATOM 108 O "O5'" . DC A 1 6 ? -27.977 6.249 2.280 1.00 64.46 ? 6 DC A "O5'" 1
ATOM 109 C "C5'" . DC A 1 6 ? -27.388 7.484 2.718 1.00 64.81 ? 6 DC A "C5'" 1
ATOM 110 C "C4'" . DC A 1 6 ? -26.268 7.893 1.790 1.00 65.01 ? 6 DC A "C4'" 1
ATOM 111 O "O4'" . DC A 1 6 ? -25.285 6.839 1.691 1.00 64.52 ? 6 DC A "O4'" 1
ATOM 112 C "C3'" . DC A 1 6 ? -26.680 8.156 0.348 1.00 65.15 ? 6 DC A "C3'" 1
ATOM 113 O "O3'" . DC A 1 6 ? -27.246 9.457 0.170 1.00 66.15 ? 6 DC A "O3'" 1
ATOM 114 C "C2'" . DC A 1 6 ? -25.365 7.992 -0.388 1.00 64.92 ? 6 DC A "C2'" 1
ATOM 115 C "C1'" . DC A 1 6 ? -24.647 6.910 0.415 1.00 64.21 ? 6 DC A "C1'" 1
ATOM 116 N N1 . DC A 1 6 ? -24.714 5.577 -0.209 1.00 63.44 ? 6 DC A N1 1
ATOM 117 C C2 . DC A 1 6 ? -23.720 5.217 -1.126 1.00 63.22 ? 6 DC A C2 1
ATOM 118 O O2 . DC A 1 6 ? -22.806 6.020 -1.365 1.00 63.70 ? 6 DC A O2 1
ATOM 119 N N3 . DC A 1 6 ? -23.777 4.003 -1.720 1.00 62.49 ? 6 DC A N3 1
ATOM 120 C C4 . DC A 1 6 ? -24.779 3.167 -1.436 1.00 61.72 ? 6 DC A C4 1
ATOM 121 N N4 . DC A 1 6 ? -24.794 1.979 -2.044 1.00 61.29 ? 6 DC A N4 1
ATOM 122 C C5 . DC A 1 6 ? -25.810 3.513 -0.515 1.00 62.04 ? 6 DC A C5 1
ATOM 123 C C6 . DC A 1 6 ? -25.743 4.719 0.064 1.00 62.62 ? 6 DC A C6 1
ATOM 124 P P . DC A 1 7 ? -28.199 9.744 -1.083 1.00 67.22 ? 7 DC A P 1
ATOM 125 O OP1 . DC A 1 7 ? -28.607 11.171 -1.031 1.00 66.83 ? 7 DC A OP1 1
ATOM 126 O OP2 . DC A 1 7 ? -29.238 8.682 -1.123 1.00 66.43 ? 7 DC A OP2 1
ATOM 127 O "O5'" . DC A 1 7 ? -27.228 9.540 -2.330 1.00 67.25 ? 7 DC A "O5'" 1
ATOM 128 C "C5'" . DC A 1 7 ? -26.460 10.642 -2.847 1.00 67.90 ? 7 DC A "C5'" 1
ATOM 129 C "C4'" . DC A 1 7 ? -25.509 10.186 -3.931 1.00 68.02 ? 7 DC A "C4'" 1
ATOM 130 O "O4'" . DC A 1 7 ? -24.942 8.896 -3.617 1.00 67.84 ? 7 DC A "O4'" 1
ATOM 131 C "C3'" . DC A 1 7 ? -26.128 9.996 -5.309 1.00 68.37 ? 7 DC A "C3'" 1
ATOM 132 O "O3'" . DC A 1 7 ? -26.285 11.232 -6.011 1.00 69.07 ? 7 DC A "O3'" 1
ATOM 133 C "C2'" . DC A 1 7 ? -25.121 9.083 -5.985 1.00 68.36 ? 7 DC A "C2'" 1
ATOM 134 C "C1'" . DC A 1 7 ? -24.545 8.260 -4.832 1.00 68.10 ? 7 DC A "C1'" 1
ATOM 135 N N1 . DC A 1 7 ? -25.029 6.869 -4.808 1.00 68.28 ? 7 DC A N1 1
ATOM 136 C C2 . DC A 1 7 ? -24.447 5.945 -5.681 1.00 68.23 ? 7 DC A C2 1
ATOM 137 O O2 . DC A 1 7 ? -23.532 6.321 -6.429 1.00 68.46 ? 7 DC A O2 1
ATOM 138 N N3 . DC A 1 7 ? -24.888 4.666 -5.682 1.00 68.16 ? 7 DC A N3 1
ATOM 139 C C4 . DC A 1 7 ? -25.877 4.301 -4.863 1.00 68.11 ? 7 DC A C4 1
ATOM 140 N N4 . DC A 1 7 ? -26.280 3.029 -4.896 1.00 68.16 ? 7 DC A N4 1
ATOM 141 C C5 . DC A 1 7 ? -26.495 5.225 -3.970 1.00 68.24 ? 7 DC A C5 1
ATOM 142 C C6 . DC A 1 7 ? -26.049 6.488 -3.980 1.00 68.21 ? 7 DC A C6 1
ATOM 143 P P . DC A 1 8 ? -27.175 11.287 -7.341 1.00 69.90 ? 8 DC A P 1
ATOM 144 O OP1 . DC A 1 8 ? -27.234 12.700 -7.796 1.00 70.61 ? 8 DC A OP1 1
ATOM 145 O OP2 . DC A 1 8 ? -28.436 10.545 -7.083 1.00 69.01 ? 8 DC A OP2 1
ATOM 146 O "O5'" . DC A 1 8 ? -26.314 10.449 -8.387 1.00 69.26 ? 8 DC A "O5'" 1
ATOM 147 C "C5'" . DC A 1 8 ? -25.684 11.082 -9.517 1.00 68.66 ? 8 DC A "C5'" 1
ATOM 148 C "C4'" . DC A 1 8 ? -25.093 10.040 -10.438 1.00 68.15 ? 8 DC A "C4'" 1
ATOM 149 O "O4'" . DC A 1 8 ? -24.854 8.818 -9.709 1.00 67.47 ? 8 DC A "O4'" 1
ATOM 150 C "C3'" . DC A 1 8 ? -26.003 9.637 -11.591 1.00 68.21 ? 8 DC A "C3'" 1
ATOM 151 O "O3'" . DC A 1 8 ? -25.812 10.497 -12.720 1.00 68.61 ? 8 DC A "O3'" 1
ATOM 152 C "C2'" . DC A 1 8 ? -25.588 8.205 -11.886 1.00 67.96 ? 8 DC A "C2'" 1
ATOM 153 C "C1'" . DC A 1 8 ? -24.920 7.714 -10.603 1.00 67.53 ? 8 DC A "C1'" 1
ATOM 154 N N1 . DC A 1 8 ? -25.632 6.616 -9.924 1.00 67.15 ? 8 DC A N1 1
ATOM 155 C C2 . DC A 1 8 ? -25.382 5.303 -10.335 1.00 67.37 ? 8 DC A C2 1
ATOM 156 O O2 . DC A 1 8 ? -24.571 5.106 -11.253 1.00 68.00 ? 8 DC A O2 1
ATOM 157 N N3 . DC A 1 8 ? -26.028 4.283 -9.722 1.00 66.61 ? 8 DC A N3 1
ATOM 158 C C4 . DC A 1 8 ? -26.893 4.537 -8.737 1.00 65.90 ? 8 DC A C4 1
ATOM 159 N N4 . DC A 1 8 ? -27.506 3.501 -8.160 1.00 65.31 ? 8 DC A N4 1
ATOM 160 C C5 . DC A 1 8 ? -27.168 5.866 -8.301 1.00 66.12 ? 8 DC A C5 1
ATOM 161 C C6 . DC A 1 8 ? -26.523 6.866 -8.917 1.00 66.64 ? 8 DC A C6 1
ATOM 162 O "O5'" . DG B 1 1 ? -26.590 -5.428 -14.261 1.00 79.11 ? 9 DG B "O5'" 1
ATOM 163 C "C5'" . DG B 1 1 ? -25.788 -5.376 -15.455 1.00 78.83 ? 9 DG B "C5'" 1
ATOM 164 C "C4'" . DG B 1 1 ? -24.985 -4.095 -15.504 1.00 78.28 ? 9 DG B "C4'" 1
ATOM 165 O "O4'" . DG B 1 1 ? -25.860 -2.962 -15.307 1.00 77.74 ? 9 DG B "O4'" 1
ATOM 166 C "C3'" . DG B 1 1 ? -23.893 -3.882 -14.460 1.00 77.93 ? 9 DG B "C3'" 1
ATOM 167 O "O3'" . DG B 1 1 ? -22.691 -4.588 -14.779 1.00 78.08 ? 9 DG B "O3'" 1
ATOM 168 C "C2'" . DG B 1 1 ? -23.713 -2.378 -14.480 1.00 77.34 ? 9 DG B "C2'" 1
ATOM 169 C "C1'" . DG B 1 1 ? -25.130 -1.877 -14.736 1.00 77.01 ? 9 DG B "C1'" 1
ATOM 170 N N9 . DG B 1 1 ? -25.834 -1.452 -13.534 1.00 76.34 ? 9 DG B N9 1
ATOM 171 C C8 . DG B 1 1 ? -26.767 -2.167 -12.822 1.00 76.41 ? 9 DG B C8 1
ATOM 172 N N7 . DG B 1 1 ? -27.228 -1.519 -11.787 1.00 75.76 ? 9 DG B N7 1
ATOM 173 C C5 . DG B 1 1 ? -26.559 -0.303 -11.817 1.00 75.48 ? 9 DG B C5 1
ATOM 174 C C6 . DG B 1 1 ? -26.643 0.813 -10.945 1.00 75.01 ? 9 DG B C6 1
ATOM 175 O O6 . DG B 1 1 ? -27.347 0.953 -9.938 1.00 74.90 ? 9 DG B O6 1
ATOM 176 N N1 . DG B 1 1 ? -25.789 1.837 -11.342 1.00 74.62 ? 9 DG B N1 1
ATOM 177 C C2 . DG B 1 1 ? -24.960 1.794 -12.437 1.00 74.99 ? 9 DG B C2 1
ATOM 178 N N2 . DG B 1 1 ? -24.205 2.882 -12.653 1.00 74.87 ? 9 DG B N2 1
ATOM 179 N N3 . DG B 1 1 ? -24.873 0.760 -13.257 1.00 75.41 ? 9 DG B N3 1
ATOM 180 C C4 . DG B 1 1 ? -25.695 -0.246 -12.890 1.00 75.65 ? 9 DG B C4 1
ATOM 181 P P . DG B 1 2 ? -21.549 -4.752 -13.670 1.00 78.33 ? 10 DG B P 1
ATOM 182 O OP1 . DG B 1 2 ? -20.482 -5.617 -14.236 1.00 78.97 ? 10 DG B OP1 1
ATOM 183 O OP2 . DG B 1 2 ? -22.200 -5.134 -12.390 1.00 77.99 ? 10 DG B OP2 1
ATOM 184 O "O5'" . DG B 1 2 ? -20.970 -3.273 -13.536 1.00 76.07 ? 10 DG B "O5'" 1
ATOM 185 C "C5'" . DG B 1 2 ? -20.544 -2.744 -12.267 1.00 73.32 ? 10 DG B "C5'" 1
ATOM 186 C "C4'" . DG B 1 2 ? -20.186 -1.283 -12.413 1.00 71.63 ? 10 DG B "C4'" 1
ATOM 187 O "O4'" . DG B 1 2 ? -21.381 -0.502 -12.651 1.00 70.82 ? 10 DG B "O4'" 1
ATOM 188 C "C3'" . DG B 1 2 ? -19.539 -0.651 -11.186 1.00 70.48 ? 10 DG B "C3'" 1
ATOM 189 O "O3'" . DG B 1 2 ? -18.125 -0.869 -11.169 1.00 69.07 ? 10 DG B "O3'" 1
ATOM 190 C "C2'" . DG B 1 2 ? -19.923 0.807 -11.341 1.00 70.29 ? 10 DG B "C2'" 1
ATOM 191 C "C1'" . DG B 1 2 ? -21.347 0.687 -11.864 1.00 70.10 ? 10 DG B "C1'" 1
ATOM 192 N N9 . DG B 1 2 ? -22.347 0.556 -10.809 1.00 69.41 ? 10 DG B N9 1
ATOM 193 C C8 . DG B 1 2 ? -23.092 -0.557 -10.502 1.00 69.07 ? 10 DG B C8 1
ATOM 194 N N7 . DG B 1 2 ? -23.900 -0.369 -9.494 1.00 68.55 ? 10 DG B N7 1
ATOM 195 C C5 . DG B 1 2 ? -23.672 0.945 -9.110 1.00 67.87 ? 10 DG B C5 1
ATOM 196 C C6 . DG B 1 2 ? -24.257 1.713 -8.071 1.00 67.11 ? 10 DG B C6 1
ATOM 197 O O6 . DG B 1 2 ? -25.123 1.375 -7.255 1.00 66.29 ? 10 DG B O6 1
ATOM 198 N N1 . DG B 1 2 ? -23.735 3.002 -8.031 1.00 67.25 ? 10 DG B N1 1
ATOM 199 C C2 . DG B 1 2 ? -22.773 3.491 -8.882 1.00 67.69 ? 10 DG B C2 1
ATOM 200 N N2 . DG B 1 2 ? -22.396 4.764 -8.685 1.00 67.75 ? 10 DG B N2 1
ATOM 201 N N3 . DG B 1 2 ? -22.220 2.785 -9.855 1.00 68.37 ? 10 DG B N3 1
ATOM 202 C C4 . DG B 1 2 ? -22.713 1.529 -9.910 1.00 68.62 ? 10 DG B C4 1
ATOM 203 P P . DG B 1 3 ? -17.363 -1.068 -9.775 1.00 67.72 ? 11 DG B P 1
ATOM 204 O OP1 . DG B 1 3 ? -15.961 -1.462 -10.069 1.00 68.55 ? 11 DG B OP1 1
ATOM 205 O OP2 . DG B 1 3 ? -18.201 -1.937 -8.910 1.00 67.55 ? 11 DG B OP2 1
ATOM 206 O "O5'" . DG B 1 3 ? -17.344 0.404 -9.166 1.00 65.17 ? 11 DG B "O5'" 1
ATOM 207 C "C5'" . DG B 1 3 ? -16.766 1.496 -9.904 1.00 62.78 ? 11 DG B "C5'" 1
ATOM 208 C "C4'" . DG B 1 3 ? -16.944 2.801 -9.163 1.00 61.19 ? 11 DG B "C4'" 1
ATOM 209 O "O4'" . DG B 1 3 ? -18.336 3.197 -9.145 1.00 60.38 ? 11 DG B "O4'" 1
ATOM 210 C "C3'" . DG B 1 3 ? -16.542 2.790 -7.694 1.00 60.00 ? 11 DG B "C3'" 1
ATOM 211 O "O3'" . DG B 1 3 ? -15.129 2.886 -7.504 1.00 59.38 ? 11 DG B "O3'" 1
ATOM 212 C "C2'" . DG B 1 3 ? -17.301 3.990 -7.168 1.00 59.65 ? 11 DG B "C2'" 1
ATOM 213 C "C1'" . DG B 1 3 ? -18.627 3.844 -7.904 1.00 59.03 ? 11 DG B "C1'" 1
ATOM 214 N N9 . DG B 1 3 ? -19.586 3.019 -7.177 1.00 57.60 ? 11 DG B N9 1
ATOM 215 C C8 . DG B 1 3 ? -19.871 1.691 -7.386 1.00 57.25 ? 11 DG B C8 1
ATOM 216 N N7 . DG B 1 3 ? -20.764 1.223 -6.558 1.00 56.89 ? 11 DG B N7 1
ATOM 217 C C5 . DG B 1 3 ? -21.080 2.303 -5.745 1.00 56.59 ? 11 DG B C5 1
ATOM 218 C C6 . DG B 1 3 ? -21.990 2.403 -4.661 1.00 56.22 ? 11 DG B C6 1
ATOM 219 O O6 . DG B 1 3 ? -22.724 1.528 -4.186 1.00 55.87 ? 11 DG B O6 1
ATOM 220 N N1 . DG B 1 3 ? -21.998 3.684 -4.116 1.00 56.12 ? 11 DG B N1 1
ATOM 221 C C2 . DG B 1 3 ? -21.230 4.734 -4.557 1.00 56.29 ? 11 DG B C2 1
ATOM 222 N N2 . DG B 1 3 ? -21.379 5.894 -3.901 1.00 56.41 ? 11 DG B N2 1
ATOM 223 N N3 . DG B 1 3 ? -20.377 4.653 -5.565 1.00 56.74 ? 11 DG B N3 1
ATOM 224 C C4 . DG B 1 3 ? -20.355 3.418 -6.110 1.00 56.94 ? 11 DG B C4 1
ATOM 225 P P . DA B 1 4 ? -14.461 2.232 -6.209 1.00 58.92 ? 12 DA B P 1
ATOM 226 O OP1 . DA B 1 4 ? -12.988 2.348 -6.343 1.00 59.44 ? 12 DA B OP1 1
ATOM 227 O OP2 . DA B 1 4 ? -15.081 0.900 -5.988 1.00 58.41 ? 12 DA B OP2 1
ATOM 228 O "O5'" . DA B 1 4 ? -14.927 3.205 -5.039 1.00 57.60 ? 12 DA B "O5'" 1
ATOM 229 C "C5'" . DA B 1 4 ? -14.481 4.570 -5.002 1.00 56.75 ? 12 DA B "C5'" 1
ATOM 230 C "C4'" . DA B 1 4 ? -15.125 5.304 -3.849 1.00 56.10 ? 12 DA B "C4'" 1
ATOM 231 O "O4'" . DA B 1 4 ? -16.564 5.292 -3.992 1.00 55.59 ? 12 DA B "O4'" 1
ATOM 232 C "C3'" . DA B 1 4 ? -14.865 4.711 -2.471 1.00 55.80 ? 12 DA B "C3'" 1
ATOM 233 O "O3'" . DA B 1 4 ? -13.622 5.181 -1.943 1.00 56.33 ? 12 DA B "O3'" 1
ATOM 234 C "C2'" . DA B 1 4 ? -16.058 5.208 -1.679 1.00 55.46 ? 12 DA B "C2'" 1
ATOM 235 C "C1'" . DA B 1 4 ? -17.179 5.172 -2.711 1.00 54.78 ? 12 DA B "C1'" 1
ATOM 236 N N9 . DA B 1 4 ? -17.957 3.934 -2.698 1.00 53.63 ? 12 DA B N9 1
ATOM 237 C C8 . DA B 1 4 ? -17.826 2.838 -3.515 1.00 53.21 ? 12 DA B C8 1
ATOM 238 N N7 . DA B 1 4 ? -18.675 1.875 -3.248 1.00 52.97 ? 12 DA B N7 1
ATOM 239 C C5 . DA B 1 4 ? -19.413 2.369 -2.182 1.00 52.85 ? 12 DA B C5 1
ATOM 240 C C6 . DA B 1 4 ? -20.473 1.827 -1.435 1.00 53.00 ? 12 DA B C6 1
ATOM 241 N N6 . DA B 1 4 ? -20.993 0.618 -1.657 1.00 53.43 ? 12 DA B N6 1
ATOM 242 N N1 . DA B 1 4 ? -20.983 2.577 -0.433 1.00 53.11 ? 12 DA B N1 1
ATOM 243 C C2 . DA B 1 4 ? -20.460 3.790 -0.209 1.00 53.20 ? 12 DA B C2 1
ATOM 244 N N3 . DA B 1 4 ? -19.465 4.408 -0.844 1.00 53.24 ? 12 DA B N3 1
ATOM 245 C C4 . DA B 1 4 ? -18.979 3.634 -1.830 1.00 53.19 ? 12 DA B C4 1
ATOM 246 P P . DT B 1 5 ? -12.624 4.168 -1.211 1.00 57.10 ? 13 DT B P 1
ATOM 247 O OP1 . DT B 1 5 ? -11.288 4.812 -1.138 1.00 57.73 ? 13 DT B OP1 1
ATOM 248 O OP2 . DT B 1 5 ? -12.766 2.832 -1.844 1.00 57.39 ? 13 DT B OP2 1
ATOM 249 O "O5'" . DT B 1 5 ? -13.206 4.099 0.268 1.00 56.98 ? 13 DT B "O5'" 1
ATOM 250 C "C5'" . DT B 1 5 ? -13.211 5.265 1.106 1.00 56.77 ? 13 DT B "C5'" 1
ATOM 251 C "C4'" . DT B 1 5 ? -14.245 5.127 2.198 1.00 56.76 ? 13 DT B "C4'" 1
ATOM 252 O "O4'" . DT B 1 5 ? -15.569 4.995 1.632 1.00 56.79 ? 13 DT B "O4'" 1
ATOM 253 C "C3'" . DT B 1 5 ? -14.096 3.901 3.088 1.00 56.80 ? 13 DT B "C3'" 1
ATOM 254 O "O3'" . DT B 1 5 ? -13.084 4.070 4.084 1.00 56.85 ? 13 DT B "O3'" 1
ATOM 255 C "C2'" . DT B 1 5 ? -15.490 3.776 3.670 1.00 56.88 ? 13 DT B "C2'" 1
ATOM 256 C "C1'" . DT B 1 5 ? -16.375 4.191 2.497 1.00 56.73 ? 13 DT B "C1'" 1
ATOM 257 N N1 . DT B 1 5 ? -16.887 3.044 1.718 1.00 56.69 ? 13 DT B N1 1
ATOM 258 C C2 . DT B 1 5 ? -18.125 2.539 2.047 1.00 57.07 ? 13 DT B C2 1
ATOM 259 O O2 . DT B 1 5 ? -18.824 3.010 2.930 1.00 57.31 ? 13 DT B O2 1
ATOM 260 N N3 . DT B 1 5 ? -18.524 1.462 1.293 1.00 57.04 ? 13 DT B N3 1
ATOM 261 C C4 . DT B 1 5 ? -17.816 0.847 0.276 1.00 56.86 ? 13 DT B C4 1
ATOM 262 O O4 . DT B 1 5 ? -18.305 -0.113 -0.314 1.00 56.92 ? 13 DT B O4 1
ATOM 263 C C5 . DT B 1 5 ? -16.521 1.423 -0.009 1.00 56.57 ? 13 DT B C5 1
ATOM 264 C C7 . DT B 1 5 ? -15.684 0.825 -1.095 1.00 56.55 ? 13 DT B C7 1
ATOM 265 C C6 . DT B 1 5 ? -16.123 2.471 0.723 1.00 56.58 ? 13 DT B C6 1
ATOM 266 P P . DC B 1 6 ? -12.380 2.784 4.728 1.00 57.55 ? 14 DC B P 1
ATOM 267 O OP1 . DC B 1 6 ? -11.311 3.256 5.644 1.00 58.04 ? 14 DC B OP1 1
ATOM 268 O OP2 . DC B 1 6 ? -12.045 1.839 3.632 1.00 57.47 ? 14 DC B OP2 1
ATOM 269 O "O5'" . DC B 1 6 ? -13.544 2.141 5.603 1.00 57.79 ? 14 DC B "O5'" 1
ATOM 270 C "C5'" . DC B 1 6 ? -14.073 2.840 6.743 1.00 58.65 ? 14 DC B "C5'" 1
ATOM 271 C "C4'" . DC B 1 6 ? -15.259 2.102 7.322 1.00 59.06 ? 14 DC B "C4'" 1
ATOM 272 O "O4'" . DC B 1 6 ? -16.326 2.014 6.352 1.00 59.34 ? 14 DC B "O4'" 1
ATOM 273 C "C3'" . DC B 1 6 ? -15.005 0.656 7.729 1.00 59.36 ? 14 DC B "C3'" 1
ATOM 274 O "O3'" . DC B 1 6 ? -14.354 0.545 8.999 1.00 59.55 ? 14 DC B "O3'" 1
ATOM 275 C "C2'" . DC B 1 6 ? -16.413 0.095 7.751 1.00 59.57 ? 14 DC B "C2'" 1
ATOM 276 C "C1'" . DC B 1 6 ? -17.079 0.822 6.586 1.00 59.74 ? 14 DC B "C1'" 1
ATOM 277 N N1 . DC B 1 6 ? -17.097 0.036 5.341 1.00 60.37 ? 14 DC B N1 1
ATOM 278 C C2 . DC B 1 6 ? -18.175 -0.824 5.108 1.00 60.79 ? 14 DC B C2 1
ATOM 279 O O2 . DC B 1 6 ? -19.088 -0.881 5.944 1.00 61.32 ? 14 DC B O2 1
ATOM 280 N N3 . DC B 1 6 ? -18.197 -1.565 3.976 1.00 60.96 ? 14 DC B N3 1
ATOM 281 C C4 . DC B 1 6 ? -17.192 -1.476 3.101 1.00 61.18 ? 14 DC B C4 1
ATOM 282 N N4 . DC B 1 6 ? -17.256 -2.223 1.997 1.00 61.40 ? 14 DC B N4 1
ATOM 283 C C5 . DC B 1 6 ? -16.077 -0.615 3.319 1.00 61.03 ? 14 DC B C5 1
ATOM 284 C C6 . DC B 1 6 ? -16.066 0.110 4.445 1.00 60.83 ? 14 DC B C6 1
ATOM 285 P P . DC B 1 7 ? -13.591 -0.810 9.389 1.00 59.56 ? 15 DC B P 1
ATOM 286 O OP1 . DC B 1 7 ? -12.933 -0.607 10.704 1.00 59.66 ? 15 DC B OP1 1
ATOM 287 O OP2 . DC B 1 7 ? -12.784 -1.241 8.219 1.00 59.48 ? 15 DC B OP2 1
ATOM 288 O "O5'" . DC B 1 7 ? -14.780 -1.850 9.576 1.00 59.47 ? 15 DC B "O5'" 1
ATOM 289 C "C5'" . DC B 1 7 ? -15.730 -1.706 10.647 1.00 59.79 ? 15 DC B "C5'" 1
ATOM 290 C "C4'" . DC B 1 7 ? -16.588 -2.944 10.759 1.00 59.78 ? 15 DC B "C4'" 1
ATOM 291 O "O4'" . DC B 1 7 ? -17.502 -3.029 9.643 1.00 59.44 ? 15 DC B "O4'" 1
ATOM 292 C "C3'" . DC B 1 7 ? -15.830 -4.266 10.744 1.00 59.75 ? 15 DC B "C3'" 1
ATOM 293 O "O3'" . DC B 1 7 ? -15.333 -4.580 12.049 1.00 60.72 ? 15 DC B "O3'" 1
ATOM 294 C "C2'" . DC B 1 7 ? -16.892 -5.236 10.266 1.00 59.40 ? 15 DC B "C2'" 1
ATOM 295 C "C1'" . DC B 1 7 ? -17.704 -4.396 9.285 1.00 58.93 ? 15 DC B "C1'" 1
ATOM 296 N N1 . DC B 1 7 ? -17.296 -4.564 7.881 1.00 58.40 ? 15 DC B N1 1
ATOM 297 C C2 . DC B 1 7 ? -17.899 -5.571 7.120 1.00 58.39 ? 15 DC B C2 1
ATOM 298 O O2 . DC B 1 7 ? -18.769 -6.281 7.646 1.00 58.16 ? 15 DC B O2 1
ATOM 299 N N3 . DC B 1 7 ? -17.525 -5.740 5.831 1.00 58.33 ? 15 DC B N3 1
ATOM 300 C C4 . DC B 1 7 ? -16.584 -4.953 5.301 1.00 58.14 ? 15 DC B C4 1
ATOM 301 N N4 . DC B 1 7 ? -16.246 -5.154 4.025 1.00 58.19 ? 15 DC B N4 1
ATOM 302 C C5 . DC B 1 7 ? -15.949 -3.926 6.056 1.00 58.14 ? 15 DC B C5 1
ATOM 303 C C6 . DC B 1 7 ? -16.328 -3.771 7.331 1.00 58.35 ? 15 DC B C6 1
ATOM 304 P P . DC B 1 8 ? -14.330 -5.809 12.254 1.00 61.70 ? 16 DC B P 1
ATOM 305 O OP1 . DC B 1 8 ? -13.742 -5.699 13.613 1.00 61.71 ? 16 DC B OP1 1
ATOM 306 O OP2 . DC B 1 8 ? -13.433 -5.879 11.072 1.00 61.35 ? 16 DC B OP2 1
ATOM 307 O "O5'" . DC B 1 8 ? -15.305 -7.070 12.229 1.00 61.70 ? 16 DC B "O5'" 1
ATOM 308 C "C5'" . DC B 1 8 ? -14.782 -8.411 12.234 1.00 61.65 ? 16 DC B "C5'" 1
ATOM 309 C "C4'" . DC B 1 8 ? -15.767 -9.366 11.599 1.00 61.30 ? 16 DC B "C4'" 1
ATOM 310 O "O4'" . DC B 1 8 ? -16.440 -8.715 10.498 1.00 61.01 ? 16 DC B "O4'" 1
ATOM 311 C "C3'" . DC B 1 8 ? -15.140 -10.627 11.011 1.00 61.28 ? 16 DC B "C3'" 1
ATOM 312 O "O3'" . DC B 1 8 ? -15.114 -11.679 11.981 1.00 61.72 ? 16 DC B "O3'" 1
ATOM 313 C "C2'" . DC B 1 8 ? -16.057 -10.967 9.851 1.00 61.20 ? 16 DC B "C2'" 1
ATOM 314 C "C1'" . DC B 1 8 ? -16.608 -9.616 9.408 1.00 60.87 ? 16 DC B "C1'" 1
ATOM 315 N N1 . DC B 1 8 ? -15.954 -9.032 8.225 1.00 60.44 ? 16 DC B N1 1
ATOM 316 C C2 . DC B 1 8 ? -16.231 -9.580 6.969 1.00 60.32 ? 16 DC B C2 1
ATOM 317 O O2 . DC B 1 8 ? -17.004 -10.547 6.894 1.00 60.64 ? 16 DC B O2 1
ATOM 318 N N3 . DC B 1 8 ? -15.644 -9.049 5.871 1.00 60.26 ? 16 DC B N3 1
ATOM 319 C C4 . DC B 1 8 ? -14.817 -8.009 5.995 1.00 60.13 ? 16 DC B C4 1
ATOM 320 N N4 . DC B 1 8 ? -14.261 -7.517 4.886 1.00 60.15 ? 16 DC B N4 1
ATOM 321 C C5 . DC B 1 8 ? -14.523 -7.426 7.262 1.00 60.30 ? 16 DC B C5 1
ATOM 322 C C6 . DC B 1 8 ? -15.107 -7.964 8.340 1.00 60.39 ? 16 DC B C6 1
HETATM 323 ZN ZN . ZN C 2 . ? -21.321 -7.108 0.306 1.00 101.21 ? 101 ZN A ZN 1
HETATM 324 ZN ZN . ZN D 2 . ? -28.103 -2.242 -10.053 0.50 74.45 ? 101 ZN B ZN 1
HETATM 325 O O . HOH E 3 . ? -25.356 -3.042 -7.752 1.00 52.14 ? 201 HOH B O 1
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