data_6D54
#
_entry.id 6D54
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.379
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 6D54 pdb_00006d54 10.2210/pdb6d54/pdb
WWPDB D_1000234003 ? ?
#
_pdbx_database_related.db_name PDB
_pdbx_database_related.details .
_pdbx_database_related.db_id 6D4L
_pdbx_database_related.content_type unspecified
#
_pdbx_database_status.status_code REL
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.entry_id 6D54
_pdbx_database_status.recvd_initial_deposition_date 2018-04-19
_pdbx_database_status.SG_entry N
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_nmr_data ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
_audit_author.identifier_ORCID
'Kovalevsky, A.' 1 ?
'Huang, Z.' 2 ?
'Vandavasi, V.G.' 3 ?
#
loop_
_citation.abstract
_citation.abstract_id_CAS
_citation.book_id_ISBN
_citation.book_publisher
_citation.book_publisher_city
_citation.book_title
_citation.coordinate_linkage
_citation.country
_citation.database_id_Medline
_citation.details
_citation.id
_citation.journal_abbrev
_citation.journal_id_ASTM
_citation.journal_id_CSD
_citation.journal_id_ISSN
_citation.journal_full
_citation.journal_issue
_citation.journal_volume
_citation.language
_citation.page_first
_citation.page_last
_citation.title
_citation.year
_citation.database_id_CSD
_citation.pdbx_database_id_DOI
_citation.pdbx_database_id_PubMed
_citation.unpublished_flag
? ? ? ? ? ? ? UK ? ? primary Structure STRUE6 2005 1878-4186 ? ? 26 ? 1645 ?
'Temperature-Induced Replacement of Phosphate Proton with Metal Ion Captured in Neutron Structures of A-DNA.'
2018 ? 10.1016/j.str.2018.08.001 30244969 ?
? ? ? ? ? ? ? US ? ? 1 'Acta Crystallogr. D Biol. Crystallogr.' ABCRE6 ? 1399-0047 ? ? 65 ? 567 573
'Generalized X-ray and neutron crystallographic analysis: more accurate and complete structures for biological macromolecules.'
2009 ? 10.1107/S0907444909011548 19465771 ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Vandavasi, V.G.' 1 ?
primary 'Blakeley, M.P.' 2 ?
primary 'Keen, D.A.' 3 ?
primary 'Hu, L.R.' 4 ?
primary 'Huang, Z.' 5 ?
primary 'Kovalevsky, A.' 6 ?
1 'Adams, P.D.' 7 ?
1 'Mustyakimov, M.' 8 ?
1 'Afonine, P.V.' 9 ?
1 'Langan, P.' 10 ?
#
_cell.angle_alpha 90.00
_cell.angle_alpha_esd ?
_cell.angle_beta 90.00
_cell.angle_beta_esd ?
_cell.angle_gamma 90.00
_cell.angle_gamma_esd ?
_cell.entry_id 6D54
_cell.details ?
_cell.formula_units_Z ?
_cell.length_a 41.884
_cell.length_a_esd ?
_cell.length_b 41.884
_cell.length_b_esd ?
_cell.length_c 24.307
_cell.length_c_esd ?
_cell.volume ?
_cell.volume_esd ?
_cell.Z_PDB 8
_cell.reciprocal_angle_alpha ?
_cell.reciprocal_angle_beta ?
_cell.reciprocal_angle_gamma ?
_cell.reciprocal_angle_alpha_esd ?
_cell.reciprocal_angle_beta_esd ?
_cell.reciprocal_angle_gamma_esd ?
_cell.reciprocal_length_a ?
_cell.reciprocal_length_b ?
_cell.reciprocal_length_c ?
_cell.reciprocal_length_a_esd ?
_cell.reciprocal_length_b_esd ?
_cell.reciprocal_length_c_esd ?
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 6D54
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 96
_symmetry.space_group_name_Hall ?
_symmetry.space_group_name_H-M 'P 43 21 2'
_symmetry.pdbx_full_space_group_name_H-M ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn
;DNA (5'-D(*GP*TP*GP*GP*(CSL)P*CP*AP*C)-3')
;
2520.592 1 ? ? ? ?
2 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ?
3 water nat water 18.015 39 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type polydeoxyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer yes
_entity_poly.pdbx_seq_one_letter_code '(DG)(DT)(DG)(DG)(CSL)(DC)(DA)(DC)'
_entity_poly.pdbx_seq_one_letter_code_can GTGGCCAC
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 DG n
1 2 DT n
1 3 DG n
1 4 DG n
1 5 CSL n
1 6 DC n
1 7 DA n
1 8 DC n
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num 1
_pdbx_entity_src_syn.pdbx_end_seq_num 8
_pdbx_entity_src_syn.organism_scientific 'synthetic construct'
_pdbx_entity_src_syn.organism_common_name ?
_pdbx_entity_src_syn.ncbi_taxonomy_id 32630
_pdbx_entity_src_syn.details ?
#
_struct_ref.id 1
_struct_ref.db_name PDB
_struct_ref.db_code 6D54
_struct_ref.pdbx_db_accession 6D54
_struct_ref.pdbx_db_isoform ?
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_align_begin 1
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 6D54
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 8
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession 6D54
_struct_ref_seq.db_align_beg 1
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 8
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 8
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
CSL 'DNA linking' n "(D)-2'-METHYLSELENYL-2'-DEOXYCYTIDINE-5'-PHOSPHATE" "(D)-2'-DEOXY-2'-SE-METHYLCYTIDINE-5'-PHOSPHATE"
'C10 H16 N3 O7 P Se' 400.184
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ?
'C10 H14 N5 O6 P' 331.222
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ?
'C9 H14 N3 O7 P' 307.197
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ?
'C10 H14 N5 O7 P' 347.221
DOD non-polymer . 'DEUTERATED WATER' ? 'D2 O'
20.028
DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ?
'C10 H15 N2 O8 P' 322.208
MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2'
24.305
#
loop_
_exptl.absorpt_coefficient_mu
_exptl.absorpt_correction_T_max
_exptl.absorpt_correction_T_min
_exptl.absorpt_correction_type
_exptl.absorpt_process_details
_exptl.entry_id
_exptl.crystals_number
_exptl.details
_exptl.method
_exptl.method_details
? ? ? ? ? 6D54 1 ? 'X-RAY DIFFRACTION' ?
? ? ? ? ? 6D54 1 ? 'NEUTRON DIFFRACTION' ?
#
_exptl_crystal.colour ?
_exptl_crystal.density_diffrn ?
_exptl_crystal.density_Matthews 2.06
_exptl_crystal.density_method ?
_exptl_crystal.density_percent_sol 40.38
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.id 1
_exptl_crystal.preparation ?
_exptl_crystal.size_max ?
_exptl_crystal.size_mid ?
_exptl_crystal.size_min ?
_exptl_crystal.size_rad ?
_exptl_crystal.colour_lustre ?
_exptl_crystal.colour_modifier ?
_exptl_crystal.colour_primary ?
_exptl_crystal.density_meas ?
_exptl_crystal.density_meas_esd ?
_exptl_crystal.density_meas_gt ?
_exptl_crystal.density_meas_lt ?
_exptl_crystal.density_meas_temp ?
_exptl_crystal.density_meas_temp_esd ?
_exptl_crystal.density_meas_temp_gt ?
_exptl_crystal.density_meas_temp_lt ?
_exptl_crystal.pdbx_crystal_image_url ?
_exptl_crystal.pdbx_crystal_image_format ?
_exptl_crystal.pdbx_mosaicity ?
_exptl_crystal.pdbx_mosaicity_esd ?
#
_exptl_crystal_grow.apparatus ?
_exptl_crystal_grow.atmosphere ?
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.details ?
_exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP'
_exptl_crystal_grow.method_ref ?
_exptl_crystal_grow.pH 5.6
_exptl_crystal_grow.pressure ?
_exptl_crystal_grow.pressure_esd ?
_exptl_crystal_grow.seeding ?
_exptl_crystal_grow.seeding_ref ?
_exptl_crystal_grow.temp 303
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.temp_esd ?
_exptl_crystal_grow.time ?
_exptl_crystal_grow.pdbx_details '0.1 M magnesium acetate, 30% MPD, 0.1 M MES'
_exptl_crystal_grow.pdbx_pH_range ?
#
loop_
_diffrn.ambient_environment
_diffrn.ambient_temp
_diffrn.ambient_temp_details
_diffrn.ambient_temp_esd
_diffrn.crystal_id
_diffrn.crystal_support
_diffrn.crystal_treatment
_diffrn.details
_diffrn.id
_diffrn.ambient_pressure
_diffrn.ambient_pressure_esd
_diffrn.ambient_pressure_gt
_diffrn.ambient_pressure_lt
_diffrn.ambient_temp_gt
_diffrn.ambient_temp_lt
? 100 ? ? 1 ? ? ? 1 ? ? ? ? ? ?
? 100 ? ? 1 ? ? ? 2 ? ? ? ? ? ?
#
loop_
_diffrn_detector.details
_diffrn_detector.detector
_diffrn_detector.diffrn_id
_diffrn_detector.type
_diffrn_detector.area_resol_mean
_diffrn_detector.dtime
_diffrn_detector.pdbx_frames_total
_diffrn_detector.pdbx_collection_time_total
_diffrn_detector.pdbx_collection_date
'osmic varimax' 'IMAGE PLATE' 1 'RIGAKU RAXIS IV++' ? ? ? ? 2017-12-12
collimators 'IMAGE PLATE' 2 'LADI III' ? ? ? ? 2017-11-20
#
loop_
_diffrn_radiation.collimation
_diffrn_radiation.diffrn_id
_diffrn_radiation.filter_edge
_diffrn_radiation.inhomogeneity
_diffrn_radiation.monochromator
_diffrn_radiation.polarisn_norm
_diffrn_radiation.polarisn_ratio
_diffrn_radiation.probe
_diffrn_radiation.type
_diffrn_radiation.xray_symbol
_diffrn_radiation.wavelength_id
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l
_diffrn_radiation.pdbx_wavelength_list
_diffrn_radiation.pdbx_wavelength
_diffrn_radiation.pdbx_diffrn_protocol
_diffrn_radiation.pdbx_analyzer
_diffrn_radiation.pdbx_scattering_type
? 1 ? ? ? ? ? ? ? ? 1 M ? ? 'SINGLE WAVELENGTH' ? x-ray
? 2 ? ? ? ? ? ? ? ? 2 L ? ? LAUE ? neutron
#
loop_
_diffrn_radiation_wavelength.id
_diffrn_radiation_wavelength.wavelength
_diffrn_radiation_wavelength.wt
1 1.54 1.0
2 2.8 1.0
3 4.0 1.0
#
loop_
_diffrn_source.current
_diffrn_source.details
_diffrn_source.diffrn_id
_diffrn_source.power
_diffrn_source.size
_diffrn_source.source
_diffrn_source.target
_diffrn_source.type
_diffrn_source.voltage
_diffrn_source.take-off_angle
_diffrn_source.pdbx_wavelength_list
_diffrn_source.pdbx_wavelength
_diffrn_source.pdbx_synchrotron_beamline
_diffrn_source.pdbx_synchrotron_site
? ? 1 ? ? 'ROTATING ANODE' ? 'RIGAKU MICROMAX-007 HF' ? ? 1.54 ? ? ?
? ? 2 ? ? 'NUCLEAR REACTOR' ? 'ILL BEAMLINE LADI III' ? ? 2.8-4.0 ? 'LADI III' ILL
#
loop_
_reflns.entry_id
_reflns.d_resolution_high
_reflns.d_resolution_low
_reflns.number_obs
_reflns.percent_possible_obs
_reflns.pdbx_redundancy
_reflns.pdbx_Rmerge_I_obs
_reflns.pdbx_netI_over_sigmaI
_reflns.pdbx_diffrn_id
_reflns.pdbx_ordinal
_reflns.number_all
_reflns.observed_criterion_sigma_F
_reflns.observed_criterion_sigma_I
_reflns.pdbx_Rsym_value
_reflns.pdbx_CC_half
_reflns.pdbx_Rpim_I_all
_reflns.pdbx_Rrim_I_all
_reflns.B_iso_Wilson_estimate
6D54 1.65 40 2866 100.0 10.4 0.056 16.6 1 1 ? ? ? ? ? ? ? ?
6D54 1.90 21.3 1629 84.6 7.0 0.179 9.10 2 2 ? ? ? ? ? ? ? ?
#
loop_
_reflns_shell.d_res_high
_reflns_shell.d_res_low
_reflns_shell.percent_possible_all
_reflns_shell.Rmerge_I_obs
_reflns_shell.pdbx_redundancy
_reflns_shell.pdbx_netI_over_sigmaI_obs
_reflns_shell.pdbx_ordinal
_reflns_shell.pdbx_diffrn_id
_reflns_shell.number_measured_obs
_reflns_shell.number_unique_all
_reflns_shell.number_unique_obs
_reflns_shell.pdbx_Rsym_value
_reflns_shell.pdbx_CC_half
_reflns_shell.pdbx_Rpim_I_all
_reflns_shell.pdbx_Rrim_I_all
_reflns_shell.meanI_over_sigI_obs
1.65 1.71 100.0 0.149 10.2 16.6 1 1 ? ? ? ? ? ? ? ?
1.90 2.00 66.0 0.226 3.4 5.30 2 2 ? ? ? ? ? ? ? ?
#
loop_
_refine.aniso_B[1][1]
_refine.aniso_B[1][2]
_refine.aniso_B[1][3]
_refine.aniso_B[2][2]
_refine.aniso_B[2][3]
_refine.aniso_B[3][3]
_refine.B_iso_max
_refine.B_iso_mean
_refine.B_iso_min
_refine.correlation_coeff_Fo_to_Fc
_refine.correlation_coeff_Fo_to_Fc_free
_refine.details
_refine.diff_density_max
_refine.diff_density_max_esd
_refine.diff_density_min
_refine.diff_density_min_esd
_refine.diff_density_rms
_refine.diff_density_rms_esd
_refine.entry_id
_refine.pdbx_refine_id
_refine.ls_abs_structure_details
_refine.ls_abs_structure_Flack
_refine.ls_abs_structure_Flack_esd
_refine.ls_abs_structure_Rogers
_refine.ls_abs_structure_Rogers_esd
_refine.ls_d_res_high
_refine.ls_d_res_low
_refine.ls_extinction_coef
_refine.ls_extinction_coef_esd
_refine.ls_extinction_expression
_refine.ls_extinction_method
_refine.ls_goodness_of_fit_all
_refine.ls_goodness_of_fit_all_esd
_refine.ls_goodness_of_fit_obs
_refine.ls_goodness_of_fit_obs_esd
_refine.ls_hydrogen_treatment
_refine.ls_matrix_type
_refine.ls_number_constraints
_refine.ls_number_parameters
_refine.ls_number_reflns_all
_refine.ls_number_reflns_obs
_refine.ls_number_reflns_R_free
_refine.ls_number_reflns_R_work
_refine.ls_number_restraints
_refine.ls_percent_reflns_obs
_refine.ls_percent_reflns_R_free
_refine.ls_R_factor_all
_refine.ls_R_factor_obs
_refine.ls_R_factor_R_free
_refine.ls_R_factor_R_free_error
_refine.ls_R_factor_R_free_error_details
_refine.ls_R_factor_R_work
_refine.ls_R_Fsqd_factor_obs
_refine.ls_R_I_factor_obs
_refine.ls_redundancy_reflns_all
_refine.ls_redundancy_reflns_obs
_refine.ls_restrained_S_all
_refine.ls_restrained_S_obs
_refine.ls_shift_over_esd_max
_refine.ls_shift_over_esd_mean
_refine.ls_structure_factor_coef
_refine.ls_weighting_details
_refine.ls_weighting_scheme
_refine.ls_wR_factor_all
_refine.ls_wR_factor_obs
_refine.ls_wR_factor_R_free
_refine.ls_wR_factor_R_work
_refine.occupancy_max
_refine.occupancy_min
_refine.solvent_model_details
_refine.solvent_model_param_bsol
_refine.solvent_model_param_ksol
_refine.ls_R_factor_gt
_refine.ls_goodness_of_fit_gt
_refine.ls_goodness_of_fit_ref
_refine.ls_shift_over_su_max
_refine.ls_shift_over_su_max_lt
_refine.ls_shift_over_su_mean
_refine.ls_shift_over_su_mean_lt
_refine.pdbx_ls_sigma_I
_refine.pdbx_ls_sigma_F
_refine.pdbx_ls_sigma_Fsqd
_refine.pdbx_data_cutoff_high_absF
_refine.pdbx_data_cutoff_high_rms_absF
_refine.pdbx_data_cutoff_low_absF
_refine.pdbx_isotropic_thermal_model
_refine.pdbx_ls_cross_valid_method
_refine.pdbx_method_to_determine_struct
_refine.pdbx_starting_model
_refine.pdbx_stereochemistry_target_values
_refine.pdbx_R_Free_selection_details
_refine.pdbx_stereochem_target_val_spec_case
_refine.pdbx_overall_ESU_R
_refine.pdbx_overall_ESU_R_Free
_refine.pdbx_solvent_vdw_probe_radii
_refine.pdbx_solvent_ion_probe_radii
_refine.pdbx_solvent_shrinkage_radii
_refine.pdbx_real_space_R
_refine.pdbx_density_correlation
_refine.pdbx_pd_number_of_powder_patterns
_refine.pdbx_pd_number_of_points
_refine.pdbx_pd_meas_number_of_points
_refine.pdbx_pd_proc_ls_prof_R_factor
_refine.pdbx_pd_proc_ls_prof_wR_factor
_refine.pdbx_pd_Marquardt_correlation_coeff
_refine.pdbx_pd_Fsqrd_R_factor
_refine.pdbx_pd_ls_matrix_band_width
_refine.pdbx_overall_phase_error
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI
_refine.pdbx_overall_SU_R_free_Blow_DPI
_refine.pdbx_overall_SU_R_Blow_DPI
_refine.pdbx_TLS_residual_ADP_flag
_refine.pdbx_diffrn_id
_refine.overall_SU_B
_refine.overall_SU_ML
_refine.overall_SU_R_Cruickshank_DPI
_refine.overall_SU_R_free
_refine.overall_FOM_free_R_set
_refine.overall_FOM_work_R_set
_refine.pdbx_average_fsc_overall
_refine.pdbx_average_fsc_work
_refine.pdbx_average_fsc_free
? ? ? ? ? ? 61.45 24.54 5.01 ? ? ? ? ? ? ? ? ? 6D54 'X-RAY DIFFRACTION' ? ? ? ? ? 1.65 40.00 ? ? ? ? ? ? ? ? ? ? ? ? 2843 2800
136 ? ? 98.2 5.0 ? ? 0.246 ? ? 0.230 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 92.2058 0.546925 ? ? ? ? ? ? ? ? 2.5 ? ? ? ? ?
'FREE R-VALUE' 'MOLECULAR REPLACEMENT' 'PDB entry 4FP6' 'joint X-ray/neutron ML' random ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ?
? ? ? ? ? ? ? ? ? ?
? ? ? ? ? ? 61.45 24.54 5.01 ? ? ? ? ? ? ? ? ? 6D54 'NEUTRON DIFFRACTION' ? ? ? ? ? 1.90 21.30 ? ? ? ? ? ? ? ? ? ? ? ? 1909 1572
65 ? ? 82.3 5.0 ? ? 0.260 ? ? 0.234 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 92.2058 0.546925 ? ? ? ? ? ? ? ? 2.5 ? ? ? ? ?
'FREE R-VALUE' 'MOLECULAR REPLACEMENT' ? 'joint X-ray/neutron ML' random ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ?
? ? ? ? ? ? ? ? ? ?
#
loop_
_refine_analyze.entry_id
_refine_analyze.pdbx_refine_id
_refine_analyze.Luzzati_coordinate_error_free
_refine_analyze.Luzzati_coordinate_error_obs
_refine_analyze.Luzzati_d_res_low_free
_refine_analyze.Luzzati_d_res_low_obs
_refine_analyze.Luzzati_sigma_a_free
_refine_analyze.Luzzati_sigma_a_free_details
_refine_analyze.Luzzati_sigma_a_obs
_refine_analyze.Luzzati_sigma_a_obs_details
_refine_analyze.number_disordered_residues
_refine_analyze.occupancy_sum_hydrogen
_refine_analyze.occupancy_sum_non_hydrogen
_refine_analyze.RG_d_res_high
_refine_analyze.RG_d_res_low
_refine_analyze.RG_free
_refine_analyze.RG_work
_refine_analyze.RG_free_work_ratio
_refine_analyze.pdbx_Luzzati_d_res_high_obs
6D54 'X-RAY DIFFRACTION' 0.21 0.19 ? 5.00 0.18 ? 0.07 ? ? ? ? ? ? ? ? ? 1.65
6D54 'NEUTRON DIFFRACTION' ? 0.23 ? 5.00 ? ? 0.19 ? ? ? ? ? ? ? ? ? 1.90
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 163
_refine_hist.pdbx_number_atoms_nucleic_acid 0
_refine_hist.pdbx_number_atoms_ligand 2
_refine_hist.number_atoms_solvent 39
_refine_hist.number_atoms_total 204
_refine_hist.d_res_high 1.65
_refine_hist.d_res_low 40.00
#
loop_
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.criterion
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.number
_refine_ls_restr.rejects
_refine_ls_restr.type
_refine_ls_restr.weight
_refine_ls_restr.pdbx_restraint_function
'X-RAY DIFFRACTION' ? 0.006 ? ? ? x_bond_d ? ?
'X-RAY DIFFRACTION' ? 0.9 ? ? ? x_angle_deg ? ?
'X-RAY DIFFRACTION' ? 0.7 ? ? ? x_torsion_deg ? ?
'X-RAY DIFFRACTION' ? 0.95 ? ? ? x_torsion_impr_deg ? ?
'NEUTRON DIFFRACTION' ? 0.006 ? ? ? x_bond_d ? ?
'NEUTRON DIFFRACTION' ? 0.9 ? ? ? x_angle_deg ? ?
'NEUTRON DIFFRACTION' ? 0.7 ? ? ? x_torsion_deg ? ?
'NEUTRON DIFFRACTION' ? 0.95 ? ? ? x_torsion_impr_deg ? ?
#
loop_
_refine_ls_shell.pdbx_refine_id
_refine_ls_shell.d_res_high
_refine_ls_shell.d_res_low
_refine_ls_shell.number_reflns_all
_refine_ls_shell.number_reflns_obs
_refine_ls_shell.number_reflns_R_free
_refine_ls_shell.number_reflns_R_work
_refine_ls_shell.percent_reflns_obs
_refine_ls_shell.percent_reflns_R_free
_refine_ls_shell.R_factor_all
_refine_ls_shell.R_factor_obs
_refine_ls_shell.R_factor_R_free
_refine_ls_shell.R_factor_R_free_error
_refine_ls_shell.R_factor_R_work
_refine_ls_shell.redundancy_reflns_all
_refine_ls_shell.redundancy_reflns_obs
_refine_ls_shell.wR_factor_all
_refine_ls_shell.wR_factor_obs
_refine_ls_shell.wR_factor_R_free
_refine_ls_shell.wR_factor_R_work
_refine_ls_shell.pdbx_total_number_of_bins_used
_refine_ls_shell.pdbx_phase_error
_refine_ls_shell.pdbx_fsc_work
_refine_ls_shell.pdbx_fsc_free
'X-RAY DIFFRACTION' 1.65 1.73 355 335 18 317 94.1 5.0 . . 0.510 0.120 0.235 . . . . . . 8 . . .
'X-RAY DIFFRACTION' 1.73 1.82 339 324 18 306 95.6 5.6 . . 0.310 0.073 0.219 . . . . . . 8 . . .
'X-RAY DIFFRACTION' 1.82 1.93 338 331 16 315 97.6 4.8 . . 0.268 0.067 0.225 . . . . . . 8 . . .
'X-RAY DIFFRACTION' 1.93 2.08 347 338 11 327 97.4 3.3 . . 0.231 0.070 0.228 . . . . . . 8 . . .
'X-RAY DIFFRACTION' 2.08 2.29 357 352 26 326 98.6 7.4 . . 0.211 0.041 0.204 . . . . . . 8 . . .
'X-RAY DIFFRACTION' 2.29 2.62 348 347 11 336 99.4 3.2 . . 0.272 0.082 0.222 . . . . . . 8 . . .
'X-RAY DIFFRACTION' 2.62 3.30 361 360 15 345 99.7 4.2 . . 0.174 0.045 0.233 . . . . . . 8 . . .
'X-RAY DIFFRACTION' 3.30 21.02 401 398 21 377 99.3 5.3 . . 0.197 0.043 0.244 . . . . . . 8 . . .
'NEUTRON DIFFRACTION' 1.90 1.99 236 155 6 149 65.7 5.0 . . 0.270 0.110 0.250 . . . . . . 8 . . .
'NEUTRON DIFFRACTION' 1.99 2.09 224 168 7 161 74.7 4.2 . . 0.249 0.094 0.266 . . . . . . 8 . . .
'NEUTRON DIFFRACTION' 2.09 2.22 234 180 14 166 76.6 7.8 . . 0.201 0.054 0.252 . . . . . . 8 . . .
'NEUTRON DIFFRACTION' 2.22 2.39 229 185 6 179 80.8 3.2 . . 0.256 0.104 0.229 . . . . . . 8 . . .
'NEUTRON DIFFRACTION' 2.39 2.63 235 193 7 186 82.1 3.6 . . 0.243 0.092 0.214 . . . . . . 8 . . .
'NEUTRON DIFFRACTION' 2.63 3.01 242 212 8 204 87.6 3.8 . . 0.181 0.064 0.233 . . . . . . 8 . . .
'NEUTRON DIFFRACTION' 3.01 3.79 243 226 18 208 93.0 8.0 . . 0.218 0.051 0.207 . . . . . . 8 . . .
'NEUTRON DIFFRACTION' 3.79 21.02 269 253 8 245 94.1 3.2 . . 0.526 0.186 0.252 . . . . . . 8 . . .
#
_struct.entry_id 6D54
_struct.title
;Low Temperature joint X-ray/neutron structure of DNA oligonucleotide d(GTGGCCAC)2 with 2'-SeCH3 modification on Cyt5
;
_struct.pdbx_model_details ?
_struct.pdbx_formula_weight ?
_struct.pdbx_formula_weight_method ?
_struct.pdbx_model_type_details ?
_struct.pdbx_CASP_flag N
#
_struct_keywords.entry_id 6D54
_struct_keywords.text 'DNA, oligonucleotide, selenium modification'
_struct_keywords.pdbx_keywords DNA
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 2 ?
D N N 3 ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
covale1 covale both ? A DG 4 "O3'" ? ? ? 1_555 A CSL 5 P ? ? A DG 4 A CSL 5 1_555 ? ? ? ? ? ? ? 1.615 ? ?
covale2 covale both ? A CSL 5 "O3'" ? ? ? 1_555 A DC 6 P ? ? A CSL 5 A DC 6 1_555 ? ? ? ? ? ? ? 1.605 ? ?
metalc1 metalc ? ? A DA 7 OP2 ? ? ? 1_555 C MG . MG ? ? A DA 7 A MG 102 1_555 ? ? ? ? ? ? ? 1.978 ? ?
metalc2 metalc ? ? B MG . MG ? ? ? 1_555 D DOD . O ? ? A MG 101 A DOD 208 1_555 ? ? ? ? ? ? ? 2.087 ? ?
metalc3 metalc ? ? B MG . MG ? ? ? 1_555 D DOD . O ? ? A MG 101 A DOD 209 1_555 ? ? ? ? ? ? ? 2.220 ? ?
metalc4 metalc ? ? B MG . MG ? ? ? 1_555 D DOD . O ? ? A MG 101 A DOD 210 1_555 ? ? ? ? ? ? ? 1.874 ? ?
metalc5 metalc ? ? B MG . MG ? ? ? 1_555 D DOD . O ? ? A MG 101 A DOD 235 1_555 ? ? ? ? ? ? ? 2.241 ? ?
metalc6 metalc ? ? B MG . MG ? ? ? 1_555 D DOD . O ? ? A MG 101 A DOD 237 1_555 ? ? ? ? ? ? ? 2.011 ? ?
metalc7 metalc ? ? B MG . MG ? ? ? 1_555 D DOD . O ? ? A MG 101 A DOD 238 1_555 ? ? ? ? ? ? ? 2.095 ? ?
metalc8 metalc ? ? C MG . MG ? ? ? 1_555 D DOD . O ? ? A MG 102 A DOD 218 1_555 ? ? ? ? ? ? ? 2.051 ? ?
metalc9 metalc ? ? C MG . MG ? ? ? 1_555 D DOD . O ? ? A MG 102 A DOD 224 1_555 ? ? ? ? ? ? ? 2.097 ? ?
metalc10 metalc ? ? C MG . MG ? ? ? 1_555 D DOD . O ? ? A MG 102 A DOD 226 1_555 ? ? ? ? ? ? ? 2.202 ? ?
metalc11 metalc ? ? C MG . MG ? ? ? 1_555 D DOD . O ? ? A MG 102 A DOD 229 1_555 ? ? ? ? ? ? ? 2.299 ? ?
metalc12 metalc ? ? C MG . MG ? ? ? 1_555 D DOD . O ? ? A MG 102 A DOD 236 4_555 ? ? ? ? ? ? ? 2.141 ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
covale ? ?
metalc ? ?
#
loop_
_struct_site.id
_struct_site.pdbx_evidence_code
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_struct_site.pdbx_auth_ins_code
_struct_site.pdbx_num_residues
_struct_site.details
AC1 Software A MG 101 ? 6 'binding site for residue MG A 101'
AC2 Software A MG 102 ? 5 'binding site for residue MG A 102'
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 6 DOD D . ? DOD A 208 . ? 1_555 ?
2 AC1 6 DOD D . ? DOD A 209 . ? 1_555 ?
3 AC1 6 DOD D . ? DOD A 210 . ? 1_555 ?
4 AC1 6 DOD D . ? DOD A 235 . ? 1_555 ?
5 AC1 6 DOD D . ? DOD A 237 . ? 1_555 ?
6 AC1 6 DOD D . ? DOD A 238 . ? 1_555 ?
7 AC2 5 DA A 7 ? DA A 7 . ? 1_555 ?
8 AC2 5 DOD D . ? DOD A 218 . ? 1_555 ?
9 AC2 5 DOD D . ? DOD A 224 . ? 1_555 ?
10 AC2 5 DOD D . ? DOD A 226 . ? 1_555 ?
11 AC2 5 DOD D . ? DOD A 229 . ? 1_555 ?
#
_atom_sites.entry_id 6D54
_atom_sites.fract_transf_matrix[1][1] 0.023875
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.023875
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.041140
_atom_sites.fract_transf_vector[1] 0.000000
_atom_sites.fract_transf_vector[2] 0.000000
_atom_sites.fract_transf_vector[3] 0.000000
#
loop_
_atom_type.symbol
C
D
H
MG
N
O
P
SE
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 O "O5'" . DG A 1 1 ? -1.098 -7.119 -10.748 1.00 23.22 ? 1 DG A "O5'" 1
ATOM 2 C "C5'" . DG A 1 1 ? -2.483 -6.903 -10.465 1.00 20.91 ? 1 DG A "C5'" 1
ATOM 3 C "C4'" . DG A 1 1 ? -3.071 -8.092 -9.735 1.00 17.86 ? 1 DG A "C4'" 1
ATOM 4 O "O4'" . DG A 1 1 ? -3.071 -9.232 -10.629 1.00 17.81 ? 1 DG A "O4'" 1
ATOM 5 C "C3'" . DG A 1 1 ? -2.326 -8.588 -8.495 1.00 18.20 ? 1 DG A "C3'" 1
ATOM 6 O "O3'" . DG A 1 1 ? -2.744 -7.858 -7.332 1.00 18.58 ? 1 DG A "O3'" 1
ATOM 7 C "C2'" . DG A 1 1 ? -2.788 -10.034 -8.428 1.00 15.93 ? 1 DG A "C2'" 1
ATOM 8 C "C1'" . DG A 1 1 ? -2.777 -10.423 -9.900 1.00 15.68 ? 1 DG A "C1'" 1
ATOM 9 N N9 . DG A 1 1 ? -1.499 -10.939 -10.384 1.00 13.39 ? 1 DG A N9 1
ATOM 10 C C8 . DG A 1 1 ? -0.606 -10.299 -11.218 1.00 15.96 ? 1 DG A C8 1
ATOM 11 N N7 . DG A 1 1 ? 0.438 -11.025 -11.509 1.00 17.38 ? 1 DG A N7 1
ATOM 12 C C5 . DG A 1 1 ? 0.234 -12.211 -10.811 1.00 15.18 ? 1 DG A C5 1
ATOM 13 C C6 . DG A 1 1 ? 1.029 -13.371 -10.729 1.00 15.76 ? 1 DG A C6 1
ATOM 14 O O6 . DG A 1 1 ? 2.112 -13.603 -11.271 1.00 14.27 ? 1 DG A O6 1
ATOM 15 N N1 . DG A 1 1 ? 0.450 -14.332 -9.912 1.00 13.90 ? 1 DG A N1 1
ATOM 16 C C2 . DG A 1 1 ? -0.738 -14.196 -9.244 1.00 14.43 ? 1 DG A C2 1
ATOM 17 N N2 . DG A 1 1 ? -1.090 -15.228 -8.465 1.00 12.58 ? 1 DG A N2 1
ATOM 18 N N3 . DG A 1 1 ? -1.504 -13.125 -9.318 1.00 12.43 ? 1 DG A N3 1
ATOM 19 C C4 . DG A 1 1 ? -0.958 -12.172 -10.111 1.00 15.34 ? 1 DG A C4 1
ATOM 20 H "H5'" . DG A 1 1 ? -3.027 -6.757 -11.402 1.00 21.67 ? 1 DG A "H5'" 1
ATOM 21 H "H5''" . DG A 1 1 ? -2.591 -6.010 -9.847 1.00 21.60 ? 1 DG A "H5''" 1
ATOM 22 H "H4'" . DG A 1 1 ? -4.074 -7.814 -9.406 1.00 19.49 ? 1 DG A "H4'" 1
ATOM 23 H "H3'" . DG A 1 1 ? -1.245 -8.503 -8.621 1.00 17.79 ? 1 DG A "H3'" 1
ATOM 24 H "H2'" . DG A 1 1 ? -2.122 -10.651 -7.832 1.00 17.70 ? 1 DG A "H2'" 1
ATOM 25 H "H2''" . DG A 1 1 ? -3.779 -10.110 -7.969 1.00 16.68 ? 1 DG A "H2''" 1
ATOM 26 H "H1'" . DG A 1 1 ? -3.557 -11.155 -10.126 1.00 16.27 ? 1 DG A "H1'" 1
ATOM 27 D D8 A DG A 1 1 ? -0.754 -9.295 -11.592 0.24 16.17 ? 1 DG A D8 1
ATOM 28 H H8 B DG A 1 1 ? -0.754 -9.295 -11.592 0.76 16.17 ? 1 DG A H8 1
ATOM 29 D D1 A DG A 1 1 ? 0.946 -15.201 -9.797 0.65 15.25 ? 1 DG A D1 1
ATOM 30 H H1 B DG A 1 1 ? 0.946 -15.201 -9.797 0.35 15.25 ? 1 DG A H1 1
ATOM 31 D D21 A DG A 1 1 ? -1.940 -15.194 -7.925 0.85 13.83 ? 1 DG A D21 1
ATOM 32 H H21 B DG A 1 1 ? -1.940 -15.194 -7.925 0.15 13.83 ? 1 DG A H21 1
ATOM 33 D D22 A DG A 1 1 ? -0.499 -16.045 -8.421 0.38 13.28 ? 1 DG A D22 1
ATOM 34 H H22 B DG A 1 1 ? -0.499 -16.045 -8.421 0.62 13.28 ? 1 DG A H22 1
ATOM 35 D D5T A DG A 1 1 ? -0.608 -6.693 -10.043 0.58 22.22 ? 1 DG A D5T 1
ATOM 36 H H5T B DG A 1 1 ? -0.608 -6.693 -10.043 0.42 22.22 ? 1 DG A H5T 1
ATOM 37 P P . DT A 1 2 ? -1.729 -7.619 -6.099 1.00 20.13 ? 2 DT A P 1
ATOM 38 O OP1 . DT A 1 2 ? -2.431 -6.723 -5.136 1.00 19.73 ? 2 DT A OP1 1
ATOM 39 O OP2 . DT A 1 2 ? -0.398 -7.232 -6.600 1.00 19.90 ? 2 DT A OP2 1
ATOM 40 O "O5'" . DT A 1 2 ? -1.557 -9.058 -5.445 1.00 18.64 ? 2 DT A "O5'" 1
ATOM 41 C "C5'" . DT A 1 2 ? -2.553 -9.610 -4.605 1.00 17.58 ? 2 DT A "C5'" 1
ATOM 42 C "C4'" . DT A 1 2 ? -2.184 -11.026 -4.226 1.00 19.61 ? 2 DT A "C4'" 1
ATOM 43 O "O4'" . DT A 1 2 ? -2.013 -11.850 -5.408 1.00 17.69 ? 2 DT A "O4'" 1
ATOM 44 C "C3'" . DT A 1 2 ? -0.866 -11.199 -3.479 1.00 20.41 ? 2 DT A "C3'" 1
ATOM 45 O "O3'" . DT A 1 2 ? -1.016 -10.826 -2.100 1.00 23.31 ? 2 DT A "O3'" 1
ATOM 46 C "C2'" . DT A 1 2 ? -0.641 -12.691 -3.659 1.00 19.47 ? 2 DT A "C2'" 1
ATOM 47 C "C1'" . DT A 1 2 ? -0.998 -12.831 -5.144 1.00 18.17 ? 2 DT A "C1'" 1
ATOM 48 N N1 . DT A 1 2 ? 0.161 -12.574 -6.056 1.00 15.71 ? 2 DT A N1 1
ATOM 49 C C2 . DT A 1 2 ? 1.053 -13.609 -6.251 1.00 16.15 ? 2 DT A C2 1
ATOM 50 O O2 . DT A 1 2 ? 0.981 -14.681 -5.661 1.00 14.87 ? 2 DT A O2 1
ATOM 51 N N3 . DT A 1 2 ? 2.055 -13.335 -7.140 1.00 13.46 ? 2 DT A N3 1
ATOM 52 C C4 . DT A 1 2 ? 2.286 -12.161 -7.813 1.00 15.73 ? 2 DT A C4 1
ATOM 53 O O4 . DT A 1 2 ? 3.207 -12.100 -8.618 1.00 16.70 ? 2 DT A O4 1
ATOM 54 C C5 . DT A 1 2 ? 1.356 -11.090 -7.534 1.00 16.71 ? 2 DT A C5 1
ATOM 55 C C7 . DT A 1 2 ? 1.610 -9.740 -8.154 1.00 16.55 ? 2 DT A C7 1
ATOM 56 C C6 . DT A 1 2 ? 0.339 -11.345 -6.683 1.00 14.82 ? 2 DT A C6 1
ATOM 57 H "H5'" . DT A 1 2 ? -3.507 -9.618 -5.127 1.00 16.63 ? 2 DT A "H5'" 1
ATOM 58 H "H5''" . DT A 1 2 ? -2.648 -9.008 -3.698 1.00 17.73 ? 2 DT A "H5''" 1
ATOM 59 H "H4'" . DT A 1 2 ? -2.968 -11.399 -3.561 1.00 18.18 ? 2 DT A "H4'" 1
ATOM 60 H "H3'" . DT A 1 2 ? -0.069 -10.604 -3.936 1.00 22.80 ? 2 DT A "H3'" 1
ATOM 61 H "H2'" . DT A 1 2 ? 0.388 -12.970 -3.452 1.00 19.92 ? 2 DT A "H2'" 1
ATOM 62 H "H2''" . DT A 1 2 ? -1.266 -13.273 -2.974 1.00 19.36 ? 2 DT A "H2''" 1
ATOM 63 H "H1'" . DT A 1 2 ? -1.416 -13.816 -5.367 1.00 19.20 ? 2 DT A "H1'" 1
ATOM 64 D D3 A DT A 1 2 ? 2.706 -14.071 -7.329 0.63 15.08 ? 2 DT A D3 1
ATOM 65 H H3 B DT A 1 2 ? 2.706 -14.071 -7.329 0.37 15.08 ? 2 DT A H3 1
ATOM 66 H H71 . DT A 1 2 ? 1.378 -9.778 -9.219 1.00 17.51 ? 2 DT A H71 1
ATOM 67 H H72 . DT A 1 2 ? 0.989 -8.983 -7.676 1.00 17.80 ? 2 DT A H72 1
ATOM 68 H H73 . DT A 1 2 ? 2.662 -9.471 -8.026 1.00 18.25 ? 2 DT A H73 1
ATOM 69 H H6 . DT A 1 2 ? -0.372 -10.546 -6.472 1.00 18.86 ? 2 DT A H6 1
ATOM 70 P P . DG A 1 3 ? 0.227 -10.181 -1.295 1.00 24.84 ? 3 DG A P 1
ATOM 71 O OP1 . DG A 1 3 ? -0.299 -9.725 0.020 1.00 24.78 ? 3 DG A OP1 1
ATOM 72 O OP2 . DG A 1 3 ? 0.998 -9.232 -2.140 1.00 22.46 ? 3 DG A OP2 1
ATOM 73 O "O5'" . DG A 1 3 ? 1.182 -11.424 -1.044 1.00 22.22 ? 3 DG A "O5'" 1
ATOM 74 C "C5'" . DG A 1 3 ? 0.800 -12.467 -0.159 1.00 22.85 ? 3 DG A "C5'" 1
ATOM 75 C "C4'" . DG A 1 3 ? 1.771 -13.619 -0.274 1.00 22.67 ? 3 DG A "C4'" 1
ATOM 76 O "O4'" . DG A 1 3 ? 1.721 -14.175 -1.613 1.00 21.55 ? 3 DG A "O4'" 1
ATOM 77 C "C3'" . DG A 1 3 ? 3.251 -13.293 -0.104 1.00 21.65 ? 3 DG A "C3'" 1
ATOM 78 O "O3'" . DG A 1 3 ? 3.605 -13.097 1.277 1.00 24.32 ? 3 DG A "O3'" 1
ATOM 79 C "C2'" . DG A 1 3 ? 3.864 -14.561 -0.672 1.00 21.69 ? 3 DG A "C2'" 1
ATOM 80 C "C1'" . DG A 1 3 ? 3.013 -14.722 -1.931 1.00 20.56 ? 3 DG A "C1'" 1
ATOM 81 N N9 . DG A 1 3 ? 3.564 -14.004 -3.084 1.00 20.57 ? 3 DG A N9 1
ATOM 82 C C8 . DG A 1 3 ? 3.220 -12.753 -3.530 1.00 17.87 ? 3 DG A C8 1
ATOM 83 N N7 . DG A 1 3 ? 3.915 -12.366 -4.564 1.00 19.29 ? 3 DG A N7 1
ATOM 84 C C5 . DG A 1 3 ? 4.777 -13.421 -4.817 1.00 18.10 ? 3 DG A C5 1
ATOM 85 C C6 . DG A 1 3 ? 5.783 -13.565 -5.813 1.00 19.13 ? 3 DG A C6 1
ATOM 86 O O6 . DG A 1 3 ? 6.117 -12.760 -6.693 1.00 18.05 ? 3 DG A O6 1
ATOM 87 N N1 . DG A 1 3 ? 6.429 -14.790 -5.712 1.00 15.66 ? 3 DG A N1 1
ATOM 88 C C2 . DG A 1 3 ? 6.149 -15.752 -4.779 1.00 16.74 ? 3 DG A C2 1
ATOM 89 N N2 . DG A 1 3 ? 6.884 -16.867 -4.830 1.00 14.77 ? 3 DG A N2 1
ATOM 90 N N3 . DG A 1 3 ? 5.209 -15.633 -3.850 1.00 18.40 ? 3 DG A N3 1
ATOM 91 C C4 . DG A 1 3 ? 4.572 -14.445 -3.925 1.00 19.15 ? 3 DG A C4 1
ATOM 92 H "H5'" . DG A 1 3 ? -0.203 -12.818 -0.413 1.00 23.47 ? 3 DG A "H5'" 1
ATOM 93 H "H5''" . DG A 1 3 ? 0.799 -12.094 0.868 1.00 23.21 ? 3 DG A "H5''" 1
ATOM 94 H "H4'" . DG A 1 3 ? 1.510 -14.349 0.501 1.00 22.44 ? 3 DG A "H4'" 1
ATOM 95 H "H3'" . DG A 1 3 ? 3.526 -12.404 -0.684 1.00 23.14 ? 3 DG A "H3'" 1
ATOM 96 H "H2'" . DG A 1 3 ? 4.917 -14.433 -0.900 1.00 21.42 ? 3 DG A "H2'" 1
ATOM 97 H "H2''" . DG A 1 3 ? 3.796 -15.389 0.040 1.00 24.70 ? 3 DG A "H2''" 1
ATOM 98 H "H1'" . DG A 1 3 ? 2.874 -15.770 -2.192 1.00 20.71 ? 3 DG A "H1'" 1
ATOM 99 D D8 A DG A 1 3 ? 2.469 -12.136 -3.060 0.31 18.80 ? 3 DG A D8 1
ATOM 100 H H8 B DG A 1 3 ? 2.469 -12.136 -3.060 0.69 18.80 ? 3 DG A H8 1
ATOM 101 D D1 A DG A 1 3 ? 7.154 -14.964 -6.386 0.92 18.55 ? 3 DG A D1 1
ATOM 102 H H1 B DG A 1 3 ? 7.154 -14.964 -6.386 0.08 18.55 ? 3 DG A H1 1
ATOM 103 D D21 A DG A 1 3 ? 6.671 -17.573 -4.135 0.96 15.23 ? 3 DG A D21 1
ATOM 104 H H21 B DG A 1 3 ? 6.671 -17.573 -4.135 0.04 15.23 ? 3 DG A H21 1
ATOM 105 D D22 A DG A 1 3 ? 7.615 -17.003 -5.508 0.73 12.92 ? 3 DG A D22 1
ATOM 106 H H22 B DG A 1 3 ? 7.615 -17.003 -5.508 0.27 12.92 ? 3 DG A H22 1
ATOM 107 P P . DG A 1 4 ? 4.909 -12.230 1.661 1.00 25.08 ? 4 DG A P 1
ATOM 108 O OP1 . DG A 1 4 ? 4.923 -12.092 3.141 1.00 26.33 ? 4 DG A OP1 1
ATOM 109 O OP2 . DG A 1 4 ? 4.945 -11.009 0.817 1.00 25.39 ? 4 DG A OP2 1
ATOM 110 O "O5'" . DG A 1 4 ? 6.132 -13.148 1.210 1.00 24.75 ? 4 DG A "O5'" 1
ATOM 111 C "C5'" . DG A 1 4 ? 6.403 -14.395 1.851 1.00 25.26 ? 4 DG A "C5'" 1
ATOM 112 C "C4'" . DG A 1 4 ? 7.465 -15.148 1.082 1.00 24.83 ? 4 DG A "C4'" 1
ATOM 113 O "O4'" . DG A 1 4 ? 7.003 -15.343 -0.279 1.00 23.19 ? 4 DG A "O4'" 1
ATOM 114 C "C3'" . DG A 1 4 ? 8.814 -14.447 0.901 1.00 24.41 ? 4 DG A "C3'" 1
ATOM 115 O "O3'" . DG A 1 4 ? 9.682 -14.573 2.053 1.00 26.71 ? 4 DG A "O3'" 1
ATOM 116 C "C2'" . DG A 1 4 ? 9.371 -15.220 -0.277 1.00 23.69 ? 4 DG A "C2'" 1
ATOM 117 C "C1'" . DG A 1 4 ? 8.130 -15.315 -1.163 1.00 22.35 ? 4 DG A "C1'" 1
ATOM 118 N N9 . DG A 1 4 ? 8.000 -14.171 -2.064 1.00 18.69 ? 4 DG A N9 1
ATOM 119 C C8 . DG A 1 4 ? 7.182 -13.070 -1.944 1.00 17.77 ? 4 DG A C8 1
ATOM 120 N N7 . DG A 1 4 ? 7.324 -12.213 -2.918 1.00 17.02 ? 4 DG A N7 1
ATOM 121 C C5 . DG A 1 4 ? 8.304 -12.775 -3.723 1.00 15.59 ? 4 DG A C5 1
ATOM 122 C C6 . DG A 1 4 ? 8.895 -12.300 -4.906 1.00 14.07 ? 4 DG A C6 1
ATOM 123 O O6 . DG A 1 4 ? 8.665 -11.245 -5.529 1.00 17.23 ? 4 DG A O6 1
ATOM 124 N N1 . DG A 1 4 ? 9.861 -13.175 -5.375 1.00 13.70 ? 4 DG A N1 1
ATOM 125 C C2 . DG A 1 4 ? 10.220 -14.358 -4.790 1.00 11.26 ? 4 DG A C2 1
ATOM 126 N N2 . DG A 1 4 ? 11.209 -15.039 -5.387 1.00 14.05 ? 4 DG A N2 1
ATOM 127 N N3 . DG A 1 4 ? 9.658 -14.832 -3.696 1.00 13.09 ? 4 DG A N3 1
ATOM 128 C C4 . DG A 1 4 ? 8.725 -13.986 -3.212 1.00 16.36 ? 4 DG A C4 1
ATOM 129 H "H5'" . DG A 1 4 ? 5.493 -14.997 1.889 1.00 25.34 ? 4 DG A "H5'" 1
ATOM 130 H "H5''" . DG A 1 4 ? 6.754 -14.216 2.867 1.00 25.48 ? 4 DG A "H5''" 1
ATOM 131 H "H4'" . DG A 1 4 ? 7.657 -16.089 1.607 1.00 24.48 ? 4 DG A "H4'" 1
ATOM 132 H "H3'" . DG A 1 4 ? 8.670 -13.386 0.665 1.00 25.26 ? 4 DG A "H3'" 1
ATOM 133 H "H2'" . DG A 1 4 ? 10.184 -14.682 -0.760 1.00 22.74 ? 4 DG A "H2'" 1
ATOM 134 H "H2''" . DG A 1 4 ? 9.780 -16.185 0.040 1.00 24.60 ? 4 DG A "H2''" 1
ATOM 135 H "H1'" . DG A 1 4 ? 8.124 -16.235 -1.750 1.00 23.06 ? 4 DG A "H1'" 1
ATOM 136 D D8 A DG A 1 4 ? 6.515 -12.910 -1.112 0.24 17.58 ? 4 DG A D8 1
ATOM 137 H H8 B DG A 1 4 ? 6.515 -12.910 -1.112 0.76 17.58 ? 4 DG A H8 1
ATOM 138 D D1 A DG A 1 4 ? 10.311 -12.894 -6.200 0.73 12.29 ? 4 DG A D1 1
ATOM 139 H H1 B DG A 1 4 ? 10.311 -12.894 -6.200 0.27 12.29 ? 4 DG A H1 1
ATOM 140 D D21 A DG A 1 4 ? 11.511 -15.918 -4.989 0.66 11.82 ? 4 DG A D21 1
ATOM 141 H H21 B DG A 1 4 ? 11.511 -15.918 -4.989 0.34 11.82 ? 4 DG A H21 1
ATOM 142 D D22 A DG A 1 4 ? 11.694 -14.619 -6.173 0.92 9.61 ? 4 DG A D22 1
ATOM 143 H H22 B DG A 1 4 ? 11.694 -14.619 -6.173 0.08 9.61 ? 4 DG A H22 1
HETATM 144 P P . CSL A 1 5 ? 10.897 -13.529 2.259 1.00 26.16 ? 5 CSL A P 1
HETATM 145 O O2P . CSL A 1 5 ? 10.435 -12.176 1.910 1.00 26.71 ? 5 CSL A O2P 1
HETATM 146 O O1P . CSL A 1 5 ? 11.538 -13.749 3.565 1.00 28.83 ? 5 CSL A O1P 1
HETATM 147 O "O5'" . CSL A 1 5 ? 12.020 -13.793 1.141 1.00 24.70 ? 5 CSL A "O5'" 1
HETATM 148 C "C5'" . CSL A 1 5 ? 12.917 -14.897 1.169 1.00 20.84 ? 5 CSL A "C5'" 1
HETATM 149 C "C4'" . CSL A 1 5 ? 13.675 -14.963 -0.118 1.00 17.87 ? 5 CSL A "C4'" 1
HETATM 150 O "O4'" . CSL A 1 5 ? 12.766 -14.792 -1.230 1.00 17.42 ? 5 CSL A "O4'" 1
HETATM 151 C "C1'" . CSL A 1 5 ? 13.438 -14.138 -2.303 1.00 15.23 ? 5 CSL A "C1'" 1
HETATM 152 N N1 . CSL A 1 5 ? 12.682 -12.875 -2.617 1.00 14.82 ? 5 CSL A N1 1
HETATM 153 C C2 . CSL A 1 5 ? 12.936 -12.258 -3.857 1.00 16.29 ? 5 CSL A C2 1
HETATM 154 O O2 . CSL A 1 5 ? 13.764 -12.738 -4.625 1.00 16.35 ? 5 CSL A O2 1
HETATM 155 N N3 . CSL A 1 5 ? 12.233 -11.117 -4.180 1.00 16.75 ? 5 CSL A N3 1
HETATM 156 C C4 . CSL A 1 5 ? 11.331 -10.595 -3.350 1.00 17.05 ? 5 CSL A C4 1
HETATM 157 N N4 . CSL A 1 5 ? 10.691 -9.490 -3.747 1.00 16.79 ? 5 CSL A N4 1
HETATM 158 C C5 . CSL A 1 5 ? 11.049 -11.186 -2.079 1.00 16.97 ? 5 CSL A C5 1
HETATM 159 C C6 . CSL A 1 5 ? 11.738 -12.309 -1.756 1.00 15.26 ? 5 CSL A C6 1
HETATM 160 C "C2'" . CSL A 1 5 ? 14.861 -13.940 -1.860 1.00 15.59 ? 5 CSL A "C2'" 1
HETATM 161 SE "SE2'" . CSL A 1 5 ? 15.920 -15.514 -2.485 1.00 5.01 ? 5 CSL A "SE2'" 1
HETATM 162 C "CA'" . CSL A 1 5 ? 16.010 -15.118 -4.372 1.00 12.70 ? 5 CSL A "CA'" 1
HETATM 163 C "C3'" . CSL A 1 5 ? 14.714 -13.882 -0.354 1.00 14.90 ? 5 CSL A "C3'" 1
HETATM 164 O "O3'" . CSL A 1 5 ? 15.900 -14.178 0.349 1.00 17.30 ? 5 CSL A "O3'" 1
HETATM 165 H "H5'1" . CSL A 1 5 ? 12.327 -15.816 1.259 1.00 23.50 ? 5 CSL A "H5'1" 1
HETATM 166 H "H5'2" . CSL A 1 5 ? 13.606 -14.797 2.006 1.00 22.46 ? 5 CSL A "H5'2" 1
HETATM 167 H "H4'" . CSL A 1 5 ? 14.168 -15.928 -0.034 1.00 17.56 ? 5 CSL A "H4'" 1
HETATM 168 H "H1'" . CSL A 1 5 ? 13.446 -14.719 -3.218 1.00 16.95 ? 5 CSL A "H1'" 1
HETATM 169 D DN41 . CSL A 1 5 ? 9.974 -9.091 -3.166 1.00 18.80 ? 5 CSL A DN41 1
HETATM 170 D DN42 . CSL A 1 5 ? 10.918 -9.061 -4.632 1.00 17.82 ? 5 CSL A DN42 1
HETATM 171 H H5 . CSL A 1 5 ? 10.314 -10.757 -1.403 1.00 17.23 ? 5 CSL A H5 1
HETATM 172 H H6 . CSL A 1 5 ? 11.548 -12.787 -0.797 1.00 15.96 ? 5 CSL A H6 1
HETATM 173 H "H2'" . CSL A 1 5 ? 15.360 -13.054 -2.246 1.00 14.32 ? 5 CSL A "H2'" 1
HETATM 174 H "HA'1" . CSL A 1 5 ? 16.711 -15.781 -4.854 1.00 12.45 ? 5 CSL A "HA'1" 1
HETATM 175 H "HA'2" . CSL A 1 5 ? 16.358 -14.087 -4.496 1.00 10.73 ? 5 CSL A "HA'2" 1
HETATM 176 H "HA'3" . CSL A 1 5 ? 15.025 -15.232 -4.822 1.00 9.87 ? 5 CSL A "HA'3" 1
HETATM 177 H "H3'" . CSL A 1 5 ? 14.427 -12.893 0.012 1.00 17.44 ? 5 CSL A "H3'" 1
ATOM 178 P P . DC A 1 6 ? 16.852 -12.979 0.832 1.00 17.66 ? 6 DC A P 1
ATOM 179 O OP1 . DC A 1 6 ? 17.892 -13.669 1.642 1.00 20.01 ? 6 DC A OP1 1
ATOM 180 O OP2 . DC A 1 6 ? 16.051 -11.891 1.445 1.00 18.94 ? 6 DC A OP2 1
ATOM 181 O "O5'" . DC A 1 6 ? 17.537 -12.383 -0.479 1.00 17.78 ? 6 DC A "O5'" 1
ATOM 182 C "C5'" . DC A 1 6 ? 18.541 -13.115 -1.187 1.00 17.51 ? 6 DC A "C5'" 1
ATOM 183 C "C4'" . DC A 1 6 ? 18.967 -12.351 -2.421 1.00 17.48 ? 6 DC A "C4'" 1
ATOM 184 O "O4'" . DC A 1 6 ? 17.866 -12.233 -3.354 1.00 15.88 ? 6 DC A "O4'" 1
ATOM 185 C "C3'" . DC A 1 6 ? 19.403 -10.911 -2.183 1.00 16.42 ? 6 DC A "C3'" 1
ATOM 186 O "O3'" . DC A 1 6 ? 20.764 -10.903 -1.730 1.00 18.92 ? 6 DC A "O3'" 1
ATOM 187 C "C2'" . DC A 1 6 ? 19.265 -10.322 -3.580 1.00 16.34 ? 6 DC A "C2'" 1
ATOM 188 C "C1'" . DC A 1 6 ? 17.982 -10.994 -4.068 1.00 16.08 ? 6 DC A "C1'" 1
ATOM 189 N N1 . DC A 1 6 ? 16.768 -10.185 -3.810 1.00 14.26 ? 6 DC A N1 1
ATOM 190 C C2 . DC A 1 6 ? 16.418 -9.200 -4.736 1.00 15.95 ? 6 DC A C2 1
ATOM 191 O O2 . DC A 1 6 ? 17.176 -8.996 -5.703 1.00 17.99 ? 6 DC A O2 1
ATOM 192 N N3 . DC A 1 6 ? 15.283 -8.487 -4.553 1.00 12.80 ? 6 DC A N3 1
ATOM 193 C C4 . DC A 1 6 ? 14.523 -8.709 -3.472 1.00 15.91 ? 6 DC A C4 1
ATOM 194 N N4 . DC A 1 6 ? 13.398 -7.999 -3.343 1.00 15.78 ? 6 DC A N4 1
ATOM 195 C C5 . DC A 1 6 ? 14.876 -9.680 -2.485 1.00 14.79 ? 6 DC A C5 1
ATOM 196 C C6 . DC A 1 6 ? 15.992 -10.391 -2.696 1.00 14.95 ? 6 DC A C6 1
ATOM 197 H "H5'" . DC A 1 6 ? 18.154 -14.087 -1.486 1.00 18.63 ? 6 DC A "H5'" 1
ATOM 198 H "H5''" . DC A 1 6 ? 19.409 -13.261 -0.541 1.00 18.44 ? 6 DC A "H5''" 1
ATOM 199 H "H4'" . DC A 1 6 ? 19.828 -12.873 -2.845 1.00 20.12 ? 6 DC A "H4'" 1
ATOM 200 H "H3'" . DC A 1 6 ? 18.760 -10.410 -1.451 1.00 17.53 ? 6 DC A "H3'" 1
ATOM 201 H "H2'" . DC A 1 6 ? 19.181 -9.240 -3.557 1.00 16.18 ? 6 DC A "H2'" 1
ATOM 202 H "H2''" . DC A 1 6 ? 20.138 -10.557 -4.196 1.00 16.55 ? 6 DC A "H2''" 1
ATOM 203 H "H1'" . DC A 1 6 ? 18.031 -11.229 -5.136 1.00 13.86 ? 6 DC A "H1'" 1
ATOM 204 D D41 A DC A 1 6 ? 12.786 -8.137 -2.558 0.93 16.54 ? 6 DC A D41 1
ATOM 205 H H41 B DC A 1 6 ? 12.786 -8.137 -2.558 0.07 16.54 ? 6 DC A H41 1
ATOM 206 D D42 A DC A 1 6 ? 13.148 -7.323 -4.040 0.98 16.46 ? 6 DC A D42 1
ATOM 207 H H42 B DC A 1 6 ? 13.148 -7.323 -4.040 0.02 16.46 ? 6 DC A H42 1
ATOM 208 H H5 . DC A 1 6 ? 14.260 -9.838 -1.594 1.00 16.77 ? 6 DC A H5 1
ATOM 209 H H6 . DC A 1 6 ? 16.290 -11.144 -1.965 1.00 11.77 ? 6 DC A H6 1
ATOM 210 P P . DA A 1 7 ? 21.309 -9.684 -0.839 1.00 19.91 ? 7 DA A P 1
ATOM 211 O OP1 . DA A 1 7 ? 22.692 -10.007 -0.411 1.00 21.83 ? 7 DA A OP1 1
ATOM 212 O OP2 . DA A 1 7 ? 20.297 -9.386 0.161 1.00 19.89 ? 7 DA A OP2 1
ATOM 213 O "O5'" . DA A 1 7 ? 21.337 -8.447 -1.838 1.00 18.55 ? 7 DA A "O5'" 1
ATOM 214 C "C5'" . DA A 1 7 ? 22.276 -8.394 -2.905 1.00 16.93 ? 7 DA A "C5'" 1
ATOM 215 C "C4'" . DA A 1 7 ? 21.917 -7.274 -3.852 1.00 16.10 ? 7 DA A "C4'" 1
ATOM 216 O "O4'" . DA A 1 7 ? 20.574 -7.445 -4.358 1.00 15.48 ? 7 DA A "O4'" 1
ATOM 217 C "C3'" . DA A 1 7 ? 21.910 -5.869 -3.263 1.00 15.43 ? 7 DA A "C3'" 1
ATOM 218 O "O3'" . DA A 1 7 ? 23.263 -5.393 -3.187 1.00 17.07 ? 7 DA A "O3'" 1
ATOM 219 C "C2'" . DA A 1 7 ? 21.087 -5.120 -4.298 1.00 16.10 ? 7 DA A "C2'" 1
ATOM 220 C "C1'" . DA A 1 7 ? 20.027 -6.160 -4.679 1.00 15.14 ? 7 DA A "C1'" 1
ATOM 221 N N9 . DA A 1 7 ? 18.758 -6.005 -3.952 1.00 13.99 ? 7 DA A N9 1
ATOM 222 C C8 . DA A 1 7 ? 18.323 -6.659 -2.816 1.00 15.44 ? 7 DA A C8 1
ATOM 223 N N7 . DA A 1 7 ? 17.112 -6.324 -2.444 1.00 13.98 ? 7 DA A N7 1
ATOM 224 C C5 . DA A 1 7 ? 16.730 -5.368 -3.374 1.00 13.78 ? 7 DA A C5 1
ATOM 225 C C6 . DA A 1 7 ? 15.555 -4.619 -3.528 1.00 14.88 ? 7 DA A C6 1
ATOM 226 N N6 . DA A 1 7 ? 14.487 -4.727 -2.723 1.00 16.33 ? 7 DA A N6 1
ATOM 227 N N1 . DA A 1 7 ? 15.505 -3.742 -4.554 1.00 15.55 ? 7 DA A N1 1
ATOM 228 C C2 . DA A 1 7 ? 16.559 -3.641 -5.371 1.00 15.77 ? 7 DA A C2 1
ATOM 229 N N3 . DA A 1 7 ? 17.716 -4.297 -5.335 1.00 15.07 ? 7 DA A N3 1
ATOM 230 C C4 . DA A 1 7 ? 17.737 -5.155 -4.303 1.00 13.66 ? 7 DA A C4 1
ATOM 231 H "H5'" . DA A 1 7 ? 22.264 -9.338 -3.451 1.00 15.79 ? 7 DA A "H5'" 1
ATOM 232 H "H5''" . DA A 1 7 ? 23.278 -8.226 -2.505 1.00 18.00 ? 7 DA A "H5''" 1
ATOM 233 H "H4'" . DA A 1 7 ? 22.667 -7.272 -4.643 1.00 12.47 ? 7 DA A "H4'" 1
ATOM 234 H "H3'" . DA A 1 7 ? 21.447 -5.854 -2.271 1.00 17.33 ? 7 DA A "H3'" 1
ATOM 235 H "H2'" . DA A 1 7 ? 20.646 -4.218 -3.880 1.00 15.56 ? 7 DA A "H2'" 1
ATOM 236 H "H2''" . DA A 1 7 ? 21.699 -4.814 -5.151 1.00 17.94 ? 7 DA A "H2''" 1
ATOM 237 H "H1'" . DA A 1 7 ? 19.821 -6.145 -5.754 1.00 16.66 ? 7 DA A "H1'" 1
ATOM 238 H H8 . DA A 1 7 ? 18.927 -7.367 -2.271 1.00 14.48 ? 7 DA A H8 1
ATOM 239 D D61 A DA A 1 7 ? 14.476 -5.370 -1.936 0.83 15.15 ? 7 DA A D61 1
ATOM 240 H H61 B DA A 1 7 ? 14.476 -5.370 -1.936 0.17 15.15 ? 7 DA A H61 1
ATOM 241 D D62 A DA A 1 7 ? 13.648 -4.205 -2.943 0.94 16.42 ? 7 DA A D62 1
ATOM 242 H H62 B DA A 1 7 ? 13.648 -4.205 -2.943 0.06 16.42 ? 7 DA A H62 1
ATOM 243 H H2 . DA A 1 7 ? 16.453 -2.924 -6.186 1.00 14.68 ? 7 DA A H2 1
ATOM 244 P P . DC A 1 8 ? 23.720 -4.375 -2.024 1.00 18.20 ? 8 DC A P 1
ATOM 245 O OP1 . DC A 1 8 ? 25.198 -4.247 -2.173 1.00 20.12 ? 8 DC A OP1 1
ATOM 246 O OP2 . DC A 1 8 ? 23.159 -4.794 -0.719 1.00 21.65 ? 8 DC A OP2 1
ATOM 247 O "O5'" . DC A 1 8 ? 23.045 -2.995 -2.433 1.00 17.76 ? 8 DC A "O5'" 1
ATOM 248 C "C5'" . DC A 1 8 ? 23.350 -2.359 -3.676 1.00 19.43 ? 8 DC A "C5'" 1
ATOM 249 C "C4'" . DC A 1 8 ? 22.447 -1.163 -3.869 1.00 20.17 ? 8 DC A "C4'" 1
ATOM 250 O "O4'" . DC A 1 8 ? 21.101 -1.658 -4.019 1.00 21.12 ? 8 DC A "O4'" 1
ATOM 251 C "C3'" . DC A 1 8 ? 22.412 -0.182 -2.694 1.00 23.38 ? 8 DC A "C3'" 1
ATOM 252 O "O3'" . DC A 1 8 ? 23.175 0.975 -2.978 1.00 26.34 ? 8 DC A "O3'" 1
ATOM 253 C "C2'" . DC A 1 8 ? 20.956 0.244 -2.587 1.00 24.19 ? 8 DC A "C2'" 1
ATOM 254 C "C1'" . DC A 1 8 ? 20.176 -0.747 -3.456 1.00 21.63 ? 8 DC A "C1'" 1
ATOM 255 N N1 . DC A 1 8 ? 19.167 -1.517 -2.699 1.00 18.99 ? 8 DC A N1 1
ATOM 256 C C2 . DC A 1 8 ? 17.821 -1.205 -2.878 1.00 16.93 ? 8 DC A C2 1
ATOM 257 O O2 . DC A 1 8 ? 17.518 -0.339 -3.705 1.00 18.12 ? 8 DC A O2 1
ATOM 258 N N3 . DC A 1 8 ? 16.888 -1.849 -2.146 1.00 15.92 ? 8 DC A N3 1
ATOM 259 C C4 . DC A 1 8 ? 17.256 -2.780 -1.265 1.00 15.59 ? 8 DC A C4 1
ATOM 260 N N4 . DC A 1 8 ? 16.301 -3.348 -0.524 1.00 17.23 ? 8 DC A N4 1
ATOM 261 C C5 . DC A 1 8 ? 18.615 -3.156 -1.092 1.00 16.46 ? 8 DC A C5 1
ATOM 262 C C6 . DC A 1 8 ? 19.533 -2.500 -1.816 1.00 17.28 ? 8 DC A C6 1
ATOM 263 H "H5'" . DC A 1 8 ? 23.198 -3.057 -4.496 1.00 18.66 ? 8 DC A "H5'" 1
ATOM 264 H "H5''" . DC A 1 8 ? 24.391 -2.031 -3.676 1.00 18.32 ? 8 DC A "H5''" 1
ATOM 265 H "H4'" . DC A 1 8 ? 22.803 -0.605 -4.739 1.00 20.56 ? 8 DC A "H4'" 1
ATOM 266 H "H3'" . DC A 1 8 ? 22.781 -0.639 -1.772 1.00 24.55 ? 8 DC A "H3'" 1
ATOM 267 D "DO3'" A DC A 1 8 ? 22.747 1.410 -3.723 0.96 27.09 ? 8 DC A "DO3'" 1
ATOM 268 H "HO3'" B DC A 1 8 ? 22.747 1.410 -3.723 0.04 27.09 ? 8 DC A "HO3'" 1
ATOM 269 H "H2'" . DC A 1 8 ? 20.620 0.235 -1.548 1.00 23.77 ? 8 DC A "H2'" 1
ATOM 270 H "H2''" . DC A 1 8 ? 20.825 1.266 -2.950 1.00 25.66 ? 8 DC A "H2''" 1
ATOM 271 H "H1'" . DC A 1 8 ? 19.676 -0.234 -4.282 1.00 21.58 ? 8 DC A "H1'" 1
ATOM 272 D D41 A DC A 1 8 ? 16.540 -4.046 0.164 0.79 18.74 ? 8 DC A D41 1
ATOM 273 H H41 B DC A 1 8 ? 16.540 -4.046 0.164 0.21 18.74 ? 8 DC A H41 1
ATOM 274 D D42 . DC A 1 8 ? 15.331 -3.083 -0.667 1.00 18.80 ? 8 DC A D42 1
ATOM 275 H H5 . DC A 1 8 ? 18.900 -3.951 -0.402 1.00 16.90 ? 8 DC A H5 1
ATOM 276 H H6 . DC A 1 8 ? 20.588 -2.746 -1.687 1.00 17.53 ? 8 DC A H6 1
HETATM 277 MG MG . MG B 2 . ? 5.408 -8.844 -5.008 1.00 34.73 ? 101 MG A MG 1
HETATM 278 MG MG . MG C 2 . ? 19.331 -8.631 1.713 1.00 27.10 ? 102 MG A MG 1
HETATM 279 O O . DOD D 3 . ? 11.518 -16.148 4.013 1.00 39.92 ? 201 DOD A O 1
HETATM 280 D D1 . DOD D 3 . ? 12.453 -16.335 3.928 1.00 41.22 ? 201 DOD A D1 1
HETATM 281 D D2 . DOD D 3 . ? 11.463 -15.192 4.011 1.00 40.62 ? 201 DOD A D2 1
HETATM 282 O O . DOD D 3 . ? 9.066 -10.375 0.763 1.00 57.77 ? 202 DOD A O 1
HETATM 283 D D1 . DOD D 3 . ? 8.141 -10.601 0.670 1.00 57.56 ? 202 DOD A D1 1
HETATM 284 D D2 . DOD D 3 . ? 9.460 -11.143 1.176 1.00 57.45 ? 202 DOD A D2 1
HETATM 285 O O . DOD D 3 . ? 4.014 -12.444 -12.493 1.00 33.54 ? 203 DOD A O 1
HETATM 286 D D1 . DOD D 3 . ? 3.651 -11.648 -12.882 1.00 33.90 ? 203 DOD A D1 1
HETATM 287 D D2 . DOD D 3 . ? 3.248 -12.944 -12.210 1.00 35.22 ? 203 DOD A D2 1
HETATM 288 O O . DOD D 3 . ? 0.480 -6.164 -8.827 1.00 38.54 ? 204 DOD A O 1
HETATM 289 D D1 . DOD D 3 . ? 0.471 -5.210 -8.751 1.00 38.87 ? 204 DOD A D1 1
HETATM 290 D D2 . DOD D 3 . ? 0.152 -6.474 -7.984 1.00 39.64 ? 204 DOD A D2 1
HETATM 291 O O . DOD D 3 . ? 19.494 -2.927 -6.788 1.00 32.79 ? 205 DOD A O 1
HETATM 292 D D1 . DOD D 3 . ? 19.634 -3.795 -7.169 1.00 33.14 ? 205 DOD A D1 1
HETATM 293 D D2 . DOD D 3 . ? 19.425 -3.086 -5.846 1.00 33.33 ? 205 DOD A D2 1
HETATM 294 O O . DOD D 3 . ? 20.438 -12.966 2.144 1.00 33.20 ? 206 DOD A O 1
HETATM 295 D D1 . DOD D 3 . ? 19.555 -13.220 1.877 1.00 34.36 ? 206 DOD A D1 1
HETATM 296 D D2 . DOD D 3 . ? 20.671 -13.590 2.830 1.00 33.79 ? 206 DOD A D2 1
HETATM 297 O O . DOD D 3 . ? 4.729 -10.080 -9.581 1.00 46.42 ? 207 DOD A O 1
HETATM 298 D D1 . DOD D 3 . ? 4.149 -10.782 -9.286 1.00 45.65 ? 207 DOD A D1 1
HETATM 299 D D2 . DOD D 3 . ? 5.170 -9.782 -8.786 1.00 46.25 ? 207 DOD A D2 1
HETATM 300 O O . DOD D 3 . ? 5.920 -9.929 -3.300 1.00 25.80 ? 208 DOD A O 1
HETATM 301 D D1 . DOD D 3 . ? 6.466 -10.712 -3.360 1.00 27.39 ? 208 DOD A D1 1
HETATM 302 D D2 . DOD D 3 . ? 5.491 -10.000 -2.448 1.00 26.87 ? 208 DOD A D2 1
HETATM 303 O O . DOD D 3 . ? 6.414 -10.069 -6.562 1.00 54.33 ? 209 DOD A O 1
HETATM 304 D D1 . DOD D 3 . ? 5.906 -10.756 -6.995 1.00 54.00 ? 209 DOD A D1 1
HETATM 305 D D2 . DOD D 3 . ? 7.256 -10.480 -6.367 1.00 54.77 ? 209 DOD A D2 1
HETATM 306 O O . DOD D 3 . ? 3.896 -9.821 -5.529 1.00 28.19 ? 210 DOD A O 1
HETATM 307 D D1 . DOD D 3 . ? 3.022 -9.437 -5.588 1.00 29.67 ? 210 DOD A D1 1
HETATM 308 D D2 . DOD D 3 . ? 3.751 -10.690 -5.154 1.00 30.04 ? 210 DOD A D2 1
HETATM 309 O O . DOD D 3 . ? 26.673 -2.187 -1.121 1.00 40.60 ? 211 DOD A O 1
HETATM 310 D D1 . DOD D 3 . ? 26.124 -1.600 -0.600 1.00 40.85 ? 211 DOD A D1 1
HETATM 311 D D2 . DOD D 3 . ? 26.075 -2.871 -1.419 1.00 40.16 ? 211 DOD A D2 1
HETATM 312 O O . DOD D 3 . ? -2.586 -4.251 -6.324 1.00 46.31 ? 212 DOD A O 1
HETATM 313 D D1 . DOD D 3 . ? -3.011 -3.650 -5.713 1.00 46.67 ? 212 DOD A D1 1
HETATM 314 D D2 . DOD D 3 . ? -3.084 -5.065 -6.247 1.00 46.61 ? 212 DOD A D2 1
HETATM 315 O O . DOD D 3 . ? 0.253 -16.601 -3.833 1.00 36.49 ? 213 DOD A O 1
HETATM 316 D D1 . DOD D 3 . ? -0.629 -16.918 -3.636 1.00 38.13 ? 213 DOD A D1 1
HETATM 317 D D2 . DOD D 3 . ? 0.134 -15.678 -4.056 1.00 37.56 ? 213 DOD A D2 1
HETATM 318 O O . DOD D 3 . ? 20.905 -4.715 0.902 1.00 26.83 ? 214 DOD A O 1
HETATM 319 D D1 . DOD D 3 . ? 21.240 -4.835 1.790 1.00 30.02 ? 214 DOD A D1 1
HETATM 320 D D2 . DOD D 3 . ? 21.671 -4.460 0.389 1.00 28.55 ? 214 DOD A D2 1
HETATM 321 O O . DOD D 3 . ? 2.655 -9.861 -12.786 1.00 29.39 ? 215 DOD A O 1
HETATM 322 D D1 . DOD D 3 . ? 2.792 -9.260 -12.053 1.00 29.87 ? 215 DOD A D1 1
HETATM 323 D D2 . DOD D 3 . ? 1.835 -9.570 -13.184 1.00 29.60 ? 215 DOD A D2 1
HETATM 324 O O . DOD D 3 . ? 1.567 -8.344 -4.750 1.00 23.93 ? 216 DOD A O 1
HETATM 325 D D1 . DOD D 3 . ? 0.979 -8.049 -5.445 1.00 23.24 ? 216 DOD A D1 1
HETATM 326 D D2 . DOD D 3 . ? 1.128 -8.085 -3.938 1.00 24.34 ? 216 DOD A D2 1
HETATM 327 O O . DOD D 3 . ? 15.858 -7.300 -0.105 1.00 29.83 ? 217 DOD A O 1
HETATM 328 D D1 . DOD D 3 . ? 16.164 -7.157 -1.001 1.00 30.84 ? 217 DOD A D1 1
HETATM 329 D D2 . DOD D 3 . ? 14.903 -7.277 -0.171 1.00 30.67 ? 217 DOD A D2 1
HETATM 330 O O . DOD D 3 . ? 19.226 -6.830 0.738 1.00 26.46 ? 218 DOD A O 1
HETATM 331 D D1 . DOD D 3 . ? 19.853 -6.147 0.501 1.00 27.33 ? 218 DOD A D1 1
HETATM 332 D D2 . DOD D 3 . ? 18.385 -6.376 0.791 1.00 25.83 ? 218 DOD A D2 1
HETATM 333 O O . DOD D 3 . ? 4.888 -17.132 -1.412 1.00 36.47 ? 219 DOD A O 1
HETATM 334 D D1 . DOD D 3 . ? 4.736 -16.720 -2.262 1.00 36.43 ? 219 DOD A D1 1
HETATM 335 D D2 . DOD D 3 . ? 5.739 -16.797 -1.132 1.00 36.57 ? 219 DOD A D2 1
HETATM 336 O O . DOD D 3 . ? 16.938 -5.525 1.270 1.00 20.36 ? 220 DOD A O 1
HETATM 337 D D1 . DOD D 3 . ? 16.270 -6.193 1.116 1.00 24.16 ? 220 DOD A D1 1
HETATM 338 D D2 . DOD D 3 . ? 16.767 -5.213 2.159 1.00 23.07 ? 220 DOD A D2 1
HETATM 339 O O . DOD D 3 . ? 3.807 -9.419 -1.472 1.00 42.61 ? 221 DOD A O 1
HETATM 340 D D1 . DOD D 3 . ? 3.606 -9.042 -2.329 1.00 43.40 ? 221 DOD A D1 1
HETATM 341 D D2 . DOD D 3 . ? 3.145 -10.099 -1.348 1.00 42.21 ? 221 DOD A D2 1
HETATM 342 O O . DOD D 3 . ? 17.837 -16.460 0.844 1.00 40.51 ? 222 DOD A O 1
HETATM 343 D D1 . DOD D 3 . ? 17.136 -15.813 0.911 1.00 40.28 ? 222 DOD A D1 1
HETATM 344 D D2 . DOD D 3 . ? 18.468 -16.069 0.239 1.00 39.58 ? 222 DOD A D2 1
HETATM 345 O O . DOD D 3 . ? -0.356 -6.798 -13.544 0.50 30.34 ? 223 DOD A O 1
HETATM 346 D D1 . DOD D 3 . ? -0.796 -5.975 -13.329 0.50 29.56 ? 223 DOD A D1 1
HETATM 347 D D2 . DOD D 3 . ? 0.053 -7.071 -12.723 0.50 29.72 ? 223 DOD A D2 1
HETATM 348 O O . DOD D 3 . ? 17.494 -9.371 1.023 1.00 30.31 ? 224 DOD A O 1
HETATM 349 D D1 . DOD D 3 . ? 17.264 -10.237 1.361 1.00 30.49 ? 224 DOD A D1 1
HETATM 350 D D2 . DOD D 3 . ? 16.755 -8.813 1.268 1.00 31.76 ? 224 DOD A D2 1
HETATM 351 O O . DOD D 3 . ? 11.894 -7.938 -0.798 1.00 33.34 ? 225 DOD A O 1
HETATM 352 D D1 . DOD D 3 . ? 10.953 -8.097 -0.869 1.00 32.54 ? 225 DOD A D1 1
HETATM 353 D D2 . DOD D 3 . ? 12.129 -8.271 0.068 1.00 31.28 ? 225 DOD A D2 1
HETATM 354 O O . DOD D 3 . ? 19.618 -10.491 2.856 1.00 34.31 ? 226 DOD A O 1
HETATM 355 D D1 . DOD D 3 . ? 19.177 -11.188 2.370 1.00 37.41 ? 226 DOD A D1 1
HETATM 356 D D2 . DOD D 3 . ? 19.201 -10.499 3.718 1.00 35.69 ? 226 DOD A D2 1
HETATM 357 O O . DOD D 3 . ? 0.530 -5.456 -4.303 1.00 52.28 ? 227 DOD A O 1
HETATM 358 D D1 . DOD D 3 . ? 0.678 -5.258 -5.228 1.00 51.42 ? 227 DOD A D1 1
HETATM 359 D D2 . DOD D 3 . ? -0.389 -5.236 -4.154 1.00 52.45 ? 227 DOD A D2 1
HETATM 360 O O . DOD D 3 . ? 12.459 -9.943 1.436 1.00 42.10 ? 228 DOD A O 1
HETATM 361 D D1 . DOD D 3 . ? 12.658 -10.878 1.388 1.00 41.84 ? 228 DOD A D1 1
HETATM 362 D D2 . DOD D 3 . ? 11.548 -9.906 1.728 1.00 42.64 ? 228 DOD A D2 1
HETATM 363 O O . DOD D 3 . ? 21.298 -8.119 2.788 1.00 33.25 ? 229 DOD A O 1
HETATM 364 D D1 . DOD D 3 . ? 21.346 -7.213 3.094 1.00 32.48 ? 229 DOD A D1 1
HETATM 365 D D2 . DOD D 3 . ? 22.076 -8.230 2.241 1.00 33.58 ? 229 DOD A D2 1
HETATM 366 O O . DOD D 3 . ? 26.254 0.446 -2.825 1.00 29.67 ? 230 DOD A O 1
HETATM 367 D D1 . DOD D 3 . ? 25.898 -0.285 -2.319 1.00 29.98 ? 230 DOD A D1 1
HETATM 368 D D2 . DOD D 3 . ? 25.923 1.227 -2.382 1.00 27.82 ? 230 DOD A D2 1
HETATM 369 O O . DOD D 3 . ? 13.561 -6.213 0.036 1.00 42.31 ? 231 DOD A O 1
HETATM 370 D D1 . DOD D 3 . ? 13.325 -5.315 0.270 1.00 41.23 ? 231 DOD A D1 1
HETATM 371 D D2 . DOD D 3 . ? 12.757 -6.587 -0.323 1.00 42.90 ? 231 DOD A D2 1
HETATM 372 O O . DOD D 3 . ? 8.202 -8.703 -1.719 1.00 36.57 ? 232 DOD A O 1
HETATM 373 D D1 . DOD D 3 . ? 7.448 -9.251 -1.936 1.00 37.01 ? 232 DOD A D1 1
HETATM 374 D D2 . DOD D 3 . ? 7.917 -7.813 -1.924 1.00 36.73 ? 232 DOD A D2 1
HETATM 375 O O . DOD D 3 . ? 4.153 -7.756 0.731 1.00 54.88 ? 233 DOD A O 1
HETATM 376 D D1 . DOD D 3 . ? 4.287 -6.886 0.355 1.00 55.08 ? 233 DOD A D1 1
HETATM 377 D D2 . DOD D 3 . ? 3.529 -8.178 0.141 1.00 54.46 ? 233 DOD A D2 1
HETATM 378 O O . DOD D 3 . ? 18.250 2.972 -3.027 1.00 31.28 ? 234 DOD A O 1
HETATM 379 D D1 . DOD D 3 . ? 18.130 2.283 -3.679 1.00 32.22 ? 234 DOD A D1 1
HETATM 380 D D2 . DOD D 3 . ? 18.970 2.660 -2.479 1.00 28.49 ? 234 DOD A D2 1
HETATM 381 O O . DOD D 3 . ? 7.283 -7.632 -4.809 1.00 60.82 ? 235 DOD A O 1
HETATM 382 D D1 . DOD D 3 . ? 7.376 -6.708 -5.043 1.00 61.23 ? 235 DOD A D1 1
HETATM 383 D D2 . DOD D 3 . ? 8.181 -7.943 -4.698 1.00 61.45 ? 235 DOD A D2 1
HETATM 384 O O . DOD D 3 . ? 28.834 -2.405 -2.518 1.00 36.99 ? 236 DOD A O 1
HETATM 385 D D1 . DOD D 3 . ? 28.724 -3.355 -2.542 1.00 35.90 ? 236 DOD A D1 1
HETATM 386 D D2 . DOD D 3 . ? 28.078 -2.089 -2.023 1.00 37.94 ? 236 DOD A D2 1
HETATM 387 O O . DOD D 3 . ? 4.345 -7.372 -4.143 1.00 47.25 ? 237 DOD A O 1
HETATM 388 D D1 . DOD D 3 . ? 4.426 -6.586 -4.685 1.00 48.08 ? 237 DOD A D1 1
HETATM 389 D D2 . DOD D 3 . ? 3.442 -7.354 -3.825 1.00 47.49 ? 237 DOD A D2 1
HETATM 390 O O . DOD D 3 . ? 5.085 -7.775 -6.780 1.00 41.20 ? 238 DOD A O 1
HETATM 391 D D1 . DOD D 3 . ? 4.624 -6.958 -6.590 1.00 43.01 ? 238 DOD A D1 1
HETATM 392 D D2 . DOD D 3 . ? 4.795 -8.015 -7.660 1.00 39.99 ? 238 DOD A D2 1
HETATM 393 O O . DOD D 3 . ? 8.334 -5.953 0.858 1.00 58.35 ? 239 DOD A O 1
HETATM 394 D D1 . DOD D 3 . ? 8.510 -6.738 1.378 1.00 57.92 ? 239 DOD A D1 1
HETATM 395 D D2 . DOD D 3 . ? 7.534 -6.162 0.374 1.00 58.03 ? 239 DOD A D2 1
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 DG 1 1 1 DG GUA A . n
A 1 2 DT 2 2 2 DT THY A . n
A 1 3 DG 3 3 3 DG GUA A . n
A 1 4 DG 4 4 4 DG GUA A . n
A 1 5 CSL 5 5 5 CSL SEC A . n
A 1 6 DC 6 6 6 DC CYT A . n
A 1 7 DA 7 7 7 DA ADE A . n
A 1 8 DC 8 8 8 DC CYT A . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MG 1 101 11 MG MG A .
C 2 MG 1 102 12 MG MG A .
D 3 DOD 1 201 1008 DOD DOD A .
D 3 DOD 2 202 1033 DOD DOD A .
D 3 DOD 3 203 1029 DOD DOD A .
D 3 DOD 4 204 1021 DOD DOD A .
D 3 DOD 5 205 1020 DOD DOD A .
D 3 DOD 6 206 1034 DOD DOD A .
D 3 DOD 7 207 1026 DOD DOD A .
D 3 DOD 8 208 1001 DOD DOD A .
D 3 DOD 9 209 1005 DOD DOD A .
D 3 DOD 10 210 1004 DOD DOD A .
D 3 DOD 11 211 1036 DOD DOD A .
D 3 DOD 12 212 1028 DOD DOD A .
D 3 DOD 13 213 1009 DOD DOD A .
D 3 DOD 14 214 1017 DOD DOD A .
D 3 DOD 15 215 1025 DOD DOD A .
D 3 DOD 16 216 1007 DOD DOD A .
D 3 DOD 17 217 1015 DOD DOD A .
D 3 DOD 18 218 1010 DOD DOD A .
D 3 DOD 19 219 1039 DOD DOD A .
D 3 DOD 20 220 1016 DOD DOD A .
D 3 DOD 21 221 1006 DOD DOD A .
D 3 DOD 22 222 1037 DOD DOD A .
D 3 DOD 23 223 1022 DOD DOD A .
D 3 DOD 24 224 1011 DOD DOD A .
D 3 DOD 25 225 1024 DOD DOD A .
D 3 DOD 26 226 1014 DOD DOD A .
D 3 DOD 27 227 1038 DOD DOD A .
D 3 DOD 28 228 1027 DOD DOD A .
D 3 DOD 29 229 1013 DOD DOD A .
D 3 DOD 30 230 1018 DOD DOD A .
D 3 DOD 31 231 1035 DOD DOD A .
D 3 DOD 32 232 1030 DOD DOD A .
D 3 DOD 33 233 1031 DOD DOD A .
D 3 DOD 34 234 1019 DOD DOD A .
D 3 DOD 35 235 1023 DOD DOD A .
D 3 DOD 36 236 1012 DOD DOD A .
D 3 DOD 37 237 1002 DOD DOD A .
D 3 DOD 38 238 1003 DOD DOD A .
D 3 DOD 39 239 1032 DOD DOD A .
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_and_software_defined_assembly
_pdbx_struct_assembly.method_details PISA
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1,2
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D
#
loop_
_pdbx_struct_assembly_prop.biol_id
_pdbx_struct_assembly_prop.type
_pdbx_struct_assembly_prop.value
_pdbx_struct_assembly_prop.details
1 'ABSA (A^2)' 9340 ?
1 MORE -16 ?
1 'SSA (A^2)' 4680 ?
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 8_554 -y,-x,-z-1/2 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -12.1535000000
#
loop_
_pdbx_struct_conn_angle.id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_alt_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_auth_atom_id
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_alt_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr2_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_atom_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code
_pdbx_struct_conn_angle.ptnr2_symmetry
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_alt_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_atom_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_pdbx_struct_conn_angle.value_esd
1 OP2 ? A DA 7 ? A DA 7 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? D DOD . ? A DOD 218 ? 1_555 89.3 ?
2 OP2 ? A DA 7 ? A DA 7 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? D DOD . ? A DOD 224 ? 1_555 92.0 ?
3 O ? D DOD . ? A DOD 218 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? D DOD . ? A DOD 224 ? 1_555 96.2 ?
4 OP2 ? A DA 7 ? A DA 7 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? D DOD . ? A DOD 226 ? 1_555 91.2 ?
5 O ? D DOD . ? A DOD 218 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? D DOD . ? A DOD 226 ? 1_555 174.5 ?
6 O ? D DOD . ? A DOD 224 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? D DOD . ? A DOD 226 ? 1_555 89.2 ?
7 OP2 ? A DA 7 ? A DA 7 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? D DOD . ? A DOD 229 ? 1_555 92.0 ?
8 O ? D DOD . ? A DOD 218 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? D DOD . ? A DOD 229 ? 1_555 94.0 ?
9 O ? D DOD . ? A DOD 224 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? D DOD . ? A DOD 229 ? 1_555 169.0 ?
10 O ? D DOD . ? A DOD 226 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? D DOD . ? A DOD 229 ? 1_555 80.4 ?
11 OP2 ? A DA 7 ? A DA 7 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? D DOD . ? A DOD 236 ? 4_555 171.7 ?
12 O ? D DOD . ? A DOD 218 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? D DOD . ? A DOD 236 ? 4_555 95.0 ?
13 O ? D DOD . ? A DOD 224 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? D DOD . ? A DOD 236 ? 4_555 94.6 ?
14 O ? D DOD . ? A DOD 226 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? D DOD . ? A DOD 236 ? 4_555 83.8 ?
15 O ? D DOD . ? A DOD 229 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? D DOD . ? A DOD 236 ? 4_555 80.6 ?
16 O ? D DOD . ? A DOD 208 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? D DOD . ? A DOD 209 ? 1_555 100.1 ?
17 O ? D DOD . ? A DOD 208 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? D DOD . ? A DOD 210 ? 1_555 98.9 ?
18 O ? D DOD . ? A DOD 209 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? D DOD . ? A DOD 210 ? 1_555 83.3 ?
19 O ? D DOD . ? A DOD 208 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? D DOD . ? A DOD 235 ? 1_555 90.2 ?
20 O ? D DOD . ? A DOD 209 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? D DOD . ? A DOD 235 ? 1_555 88.9 ?
21 O ? D DOD . ? A DOD 210 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? D DOD . ? A DOD 235 ? 1_555 169.0 ?
22 O ? D DOD . ? A DOD 208 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? D DOD . ? A DOD 237 ? 1_555 99.1 ?
23 O ? D DOD . ? A DOD 209 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? D DOD . ? A DOD 237 ? 1_555 160.8 ?
24 O ? D DOD . ? A DOD 210 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? D DOD . ? A DOD 237 ? 1_555 94.3 ?
25 O ? D DOD . ? A DOD 235 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? D DOD . ? A DOD 237 ? 1_555 90.5 ?
26 O ? D DOD . ? A DOD 208 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? D DOD . ? A DOD 238 ? 1_555 174.5 ?
27 O ? D DOD . ? A DOD 209 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? D DOD . ? A DOD 238 ? 1_555 76.1 ?
28 O ? D DOD . ? A DOD 210 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? D DOD . ? A DOD 238 ? 1_555 84.6 ?
29 O ? D DOD . ? A DOD 235 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? D DOD . ? A DOD 238 ? 1_555 85.9 ?
30 O ? D DOD . ? A DOD 237 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? D DOD . ? A DOD 238 ? 1_555 84.8 ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2018-10-17
2 'Structure model' 1 1 2018-12-19
3 'Structure model' 2 0 2022-03-02
4 'Structure model' 2 1 2023-10-04
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Data collection'
2 2 'Structure model' 'Database references'
3 3 'Structure model' Advisory
4 3 'Structure model' 'Data collection'
5 3 'Structure model' 'Database references'
6 3 'Structure model' 'Derived calculations'
7 3 'Structure model' 'Polymer sequence'
8 3 'Structure model' 'Refinement description'
9 3 'Structure model' 'Structure summary'
10 4 'Structure model' 'Data collection'
11 4 'Structure model' 'Refinement description'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 2 'Structure model' citation
2 3 'Structure model' database_2
3 3 'Structure model' diffrn_radiation_wavelength
4 3 'Structure model' diffrn_source
5 3 'Structure model' entity
6 3 'Structure model' entity_poly
7 3 'Structure model' pdbx_struct_conn_angle
8 3 'Structure model' pdbx_unobs_or_zero_occ_atoms
9 3 'Structure model' refine_hist
10 3 'Structure model' struct_conn
11 4 'Structure model' chem_comp_atom
12 4 'Structure model' chem_comp_bond
13 4 'Structure model' pdbx_initial_refinement_model
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 2 'Structure model' '_citation.journal_volume'
2 2 'Structure model' '_citation.page_first'
3 3 'Structure model' '_database_2.pdbx_DOI'
4 3 'Structure model' '_database_2.pdbx_database_accession'
5 3 'Structure model' '_diffrn_source.pdbx_synchrotron_beamline'
6 3 'Structure model' '_diffrn_source.pdbx_synchrotron_site'
7 3 'Structure model' '_entity.formula_weight'
8 3 'Structure model' '_entity_poly.type'
9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id'
10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id'
11 3 'Structure model' '_pdbx_struct_conn_angle.value'
12 3 'Structure model' '_refine_hist.d_res_low'
13 3 'Structure model' '_struct_conn.pdbx_dist_value'
14 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id'
#
loop_
_software.citation_id
_software.classification
_software.compiler_name
_software.compiler_version
_software.contact_author
_software.contact_author_email
_software.date
_software.description
_software.dependencies
_software.hardware
_software.language
_software.location
_software.mods
_software.name
_software.os
_software.os_version
_software.type
_software.version
_software.pdbx_ordinal
? refinement ? ? ? ? ? ? ? ? ? ? ? nCNS ? ? ? 1.0.0 1
? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 2
? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 3
? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4
? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? LAUEGEN ? ? ? . 5
? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? LSCALE ? ? ? . 6
? phasing ? ? ? ? ? ? ? ? ? ? ? CNS ? ? ? . 7
#
loop_
_pdbx_validate_close_contact.id
_pdbx_validate_close_contact.PDB_model_num
_pdbx_validate_close_contact.auth_atom_id_1
_pdbx_validate_close_contact.auth_asym_id_1
_pdbx_validate_close_contact.auth_comp_id_1
_pdbx_validate_close_contact.auth_seq_id_1
_pdbx_validate_close_contact.PDB_ins_code_1
_pdbx_validate_close_contact.label_alt_id_1
_pdbx_validate_close_contact.auth_atom_id_2
_pdbx_validate_close_contact.auth_asym_id_2
_pdbx_validate_close_contact.auth_comp_id_2
_pdbx_validate_close_contact.auth_seq_id_2
_pdbx_validate_close_contact.PDB_ins_code_2
_pdbx_validate_close_contact.label_alt_id_2
_pdbx_validate_close_contact.dist
1 1 O1P A CSL 5 ? ? D2 A DOD 201 ? ? 1.51
2 1 O2P A CSL 5 ? ? D2 A DOD 202 ? ? 1.60
#
loop_
_pdbx_validate_symm_contact.id
_pdbx_validate_symm_contact.PDB_model_num
_pdbx_validate_symm_contact.auth_atom_id_1
_pdbx_validate_symm_contact.auth_asym_id_1
_pdbx_validate_symm_contact.auth_comp_id_1
_pdbx_validate_symm_contact.auth_seq_id_1
_pdbx_validate_symm_contact.PDB_ins_code_1
_pdbx_validate_symm_contact.label_alt_id_1
_pdbx_validate_symm_contact.site_symmetry_1
_pdbx_validate_symm_contact.auth_atom_id_2
_pdbx_validate_symm_contact.auth_asym_id_2
_pdbx_validate_symm_contact.auth_comp_id_2
_pdbx_validate_symm_contact.auth_seq_id_2
_pdbx_validate_symm_contact.PDB_ins_code_2
_pdbx_validate_symm_contact.label_alt_id_2
_pdbx_validate_symm_contact.site_symmetry_2
_pdbx_validate_symm_contact.dist
1 1 D1 A DOD 214 ? ? 1_555 O A DOD 230 ? ? 4_555 1.54
2 1 O A DOD 203 ? ? 1_555 D1 A DOD 231 ? ? 8_554 1.57
#
_pdbx_distant_solvent_atoms.id 1
_pdbx_distant_solvent_atoms.PDB_model_num 1
_pdbx_distant_solvent_atoms.auth_atom_id O
_pdbx_distant_solvent_atoms.label_alt_id ?
_pdbx_distant_solvent_atoms.auth_asym_id A
_pdbx_distant_solvent_atoms.auth_comp_id DOD
_pdbx_distant_solvent_atoms.auth_seq_id 239
_pdbx_distant_solvent_atoms.PDB_ins_code ?
_pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.09
_pdbx_distant_solvent_atoms.neighbor_ligand_distance .
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
CSL P P N N 1
CSL O2P O N N 2
CSL O1P O N N 3
CSL "O5'" O N N 4
CSL "C5'" C N N 5
CSL "C4'" C N R 6
CSL "O4'" O N N 7
CSL "C1'" C N R 8
CSL N1 N N N 9
CSL C2 C N N 10
CSL O2 O N N 11
CSL N3 N N N 12
CSL C4 C N N 13
CSL N4 N N N 14
CSL C5 C N N 15
CSL C6 C N N 16
CSL "C2'" C N R 17
CSL "SE2'" SE N N 18
CSL "CA'" C N N 19
CSL "C3'" C N R 20
CSL "O3'" O N N 21
CSL O3P O N N 22
CSL HOP2 H N N 23
CSL "H5'1" H N N 24
CSL "H5'2" H N N 25
CSL "H4'" H N N 26
CSL "H1'" H N N 27
CSL HN41 H N N 28
CSL HN42 H N N 29
CSL H5 H N N 30
CSL H6 H N N 31
CSL "H2'" H N N 32
CSL "HA'1" H N N 33
CSL "HA'2" H N N 34
CSL "HA'3" H N N 35
CSL "H3'" H N N 36
CSL H3T H N N 37
CSL HOP3 H N N 38
DA OP3 O N N 39
DA P P N N 40
DA OP1 O N N 41
DA OP2 O N N 42
DA "O5'" O N N 43
DA "C5'" C N N 44
DA "C4'" C N R 45
DA "O4'" O N N 46
DA "C3'" C N S 47
DA "O3'" O N N 48
DA "C2'" C N N 49
DA "C1'" C N R 50
DA N9 N Y N 51
DA C8 C Y N 52
DA N7 N Y N 53
DA C5 C Y N 54
DA C6 C Y N 55
DA N6 N N N 56
DA N1 N Y N 57
DA C2 C Y N 58
DA N3 N Y N 59
DA C4 C Y N 60
DA HOP3 H N N 61
DA HOP2 H N N 62
DA "H5'" H N N 63
DA "H5''" H N N 64
DA "H4'" H N N 65
DA "H3'" H N N 66
DA "HO3'" H N N 67
DA "H2'" H N N 68
DA "H2''" H N N 69
DA "H1'" H N N 70
DA H8 H N N 71
DA H61 H N N 72
DA H62 H N N 73
DA H2 H N N 74
DC OP3 O N N 75
DC P P N N 76
DC OP1 O N N 77
DC OP2 O N N 78
DC "O5'" O N N 79
DC "C5'" C N N 80
DC "C4'" C N R 81
DC "O4'" O N N 82
DC "C3'" C N S 83
DC "O3'" O N N 84
DC "C2'" C N N 85
DC "C1'" C N R 86
DC N1 N N N 87
DC C2 C N N 88
DC O2 O N N 89
DC N3 N N N 90
DC C4 C N N 91
DC N4 N N N 92
DC C5 C N N 93
DC C6 C N N 94
DC HOP3 H N N 95
DC HOP2 H N N 96
DC "H5'" H N N 97
DC "H5''" H N N 98
DC "H4'" H N N 99
DC "H3'" H N N 100
DC "HO3'" H N N 101
DC "H2'" H N N 102
DC "H2''" H N N 103
DC "H1'" H N N 104
DC H41 H N N 105
DC H42 H N N 106
DC H5 H N N 107
DC H6 H N N 108
DG OP3 O N N 109
DG P P N N 110
DG OP1 O N N 111
DG OP2 O N N 112
DG "O5'" O N N 113
DG "C5'" C N N 114
DG "C4'" C N R 115
DG "O4'" O N N 116
DG "C3'" C N S 117
DG "O3'" O N N 118
DG "C2'" C N N 119
DG "C1'" C N R 120
DG N9 N Y N 121
DG C8 C Y N 122
DG N7 N Y N 123
DG C5 C Y N 124
DG C6 C N N 125
DG O6 O N N 126
DG N1 N N N 127
DG C2 C N N 128
DG N2 N N N 129
DG N3 N N N 130
DG C4 C Y N 131
DG HOP3 H N N 132
DG HOP2 H N N 133
DG "H5'" H N N 134
DG "H5''" H N N 135
DG "H4'" H N N 136
DG "H3'" H N N 137
DG "HO3'" H N N 138
DG "H2'" H N N 139
DG "H2''" H N N 140
DG "H1'" H N N 141
DG H8 H N N 142
DG H1 H N N 143
DG H21 H N N 144
DG H22 H N N 145
DOD O O N N 146
DOD D1 D N N 147
DOD D2 D N N 148
DT OP3 O N N 149
DT P P N N 150
DT OP1 O N N 151
DT OP2 O N N 152
DT "O5'" O N N 153
DT "C5'" C N N 154
DT "C4'" C N R 155
DT "O4'" O N N 156
DT "C3'" C N S 157
DT "O3'" O N N 158
DT "C2'" C N N 159
DT "C1'" C N R 160
DT N1 N N N 161
DT C2 C N N 162
DT O2 O N N 163
DT N3 N N N 164
DT C4 C N N 165
DT O4 O N N 166
DT C5 C N N 167
DT C7 C N N 168
DT C6 C N N 169
DT HOP3 H N N 170
DT HOP2 H N N 171
DT "H5'" H N N 172
DT "H5''" H N N 173
DT "H4'" H N N 174
DT "H3'" H N N 175
DT "HO3'" H N N 176
DT "H2'" H N N 177
DT "H2''" H N N 178
DT "H1'" H N N 179
DT H3 H N N 180
DT H71 H N N 181
DT H72 H N N 182
DT H73 H N N 183
DT H6 H N N 184
MG MG MG N N 185
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
CSL P O2P sing N N 1
CSL P O1P doub N N 2
CSL P "O5'" sing N N 3
CSL P O3P sing N N 4
CSL O2P HOP2 sing N N 5
CSL "O5'" "C5'" sing N N 6
CSL "C5'" "C4'" sing N N 7
CSL "C5'" "H5'1" sing N N 8
CSL "C5'" "H5'2" sing N N 9
CSL "C4'" "O4'" sing N N 10
CSL "C4'" "C3'" sing N N 11
CSL "C4'" "H4'" sing N N 12
CSL "O4'" "C1'" sing N N 13
CSL "C1'" N1 sing N N 14
CSL "C1'" "C2'" sing N N 15
CSL "C1'" "H1'" sing N N 16
CSL N1 C2 sing N N 17
CSL N1 C6 sing N N 18
CSL C2 O2 doub N N 19
CSL C2 N3 sing N N 20
CSL N3 C4 doub N N 21
CSL C4 N4 sing N N 22
CSL C4 C5 sing N N 23
CSL N4 HN41 sing N N 24
CSL N4 HN42 sing N N 25
CSL C5 C6 doub N N 26
CSL C5 H5 sing N N 27
CSL C6 H6 sing N N 28
CSL "C2'" "SE2'" sing N N 29
CSL "C2'" "C3'" sing N N 30
CSL "C2'" "H2'" sing N N 31
CSL "SE2'" "CA'" sing N N 32
CSL "CA'" "HA'1" sing N N 33
CSL "CA'" "HA'2" sing N N 34
CSL "CA'" "HA'3" sing N N 35
CSL "C3'" "O3'" sing N N 36
CSL "C3'" "H3'" sing N N 37
CSL "O3'" H3T sing N N 38
CSL O3P HOP3 sing N N 39
DA OP3 P sing N N 40
DA OP3 HOP3 sing N N 41
DA P OP1 doub N N 42
DA P OP2 sing N N 43
DA P "O5'" sing N N 44
DA OP2 HOP2 sing N N 45
DA "O5'" "C5'" sing N N 46
DA "C5'" "C4'" sing N N 47
DA "C5'" "H5'" sing N N 48
DA "C5'" "H5''" sing N N 49
DA "C4'" "O4'" sing N N 50
DA "C4'" "C3'" sing N N 51
DA "C4'" "H4'" sing N N 52
DA "O4'" "C1'" sing N N 53
DA "C3'" "O3'" sing N N 54
DA "C3'" "C2'" sing N N 55
DA "C3'" "H3'" sing N N 56
DA "O3'" "HO3'" sing N N 57
DA "C2'" "C1'" sing N N 58
DA "C2'" "H2'" sing N N 59
DA "C2'" "H2''" sing N N 60
DA "C1'" N9 sing N N 61
DA "C1'" "H1'" sing N N 62
DA N9 C8 sing Y N 63
DA N9 C4 sing Y N 64
DA C8 N7 doub Y N 65
DA C8 H8 sing N N 66
DA N7 C5 sing Y N 67
DA C5 C6 sing Y N 68
DA C5 C4 doub Y N 69
DA C6 N6 sing N N 70
DA C6 N1 doub Y N 71
DA N6 H61 sing N N 72
DA N6 H62 sing N N 73
DA N1 C2 sing Y N 74
DA C2 N3 doub Y N 75
DA C2 H2 sing N N 76
DA N3 C4 sing Y N 77
DC OP3 P sing N N 78
DC OP3 HOP3 sing N N 79
DC P OP1 doub N N 80
DC P OP2 sing N N 81
DC P "O5'" sing N N 82
DC OP2 HOP2 sing N N 83
DC "O5'" "C5'" sing N N 84
DC "C5'" "C4'" sing N N 85
DC "C5'" "H5'" sing N N 86
DC "C5'" "H5''" sing N N 87
DC "C4'" "O4'" sing N N 88
DC "C4'" "C3'" sing N N 89
DC "C4'" "H4'" sing N N 90
DC "O4'" "C1'" sing N N 91
DC "C3'" "O3'" sing N N 92
DC "C3'" "C2'" sing N N 93
DC "C3'" "H3'" sing N N 94
DC "O3'" "HO3'" sing N N 95
DC "C2'" "C1'" sing N N 96
DC "C2'" "H2'" sing N N 97
DC "C2'" "H2''" sing N N 98
DC "C1'" N1 sing N N 99
DC "C1'" "H1'" sing N N 100
DC N1 C2 sing N N 101
DC N1 C6 sing N N 102
DC C2 O2 doub N N 103
DC C2 N3 sing N N 104
DC N3 C4 doub N N 105
DC C4 N4 sing N N 106
DC C4 C5 sing N N 107
DC N4 H41 sing N N 108
DC N4 H42 sing N N 109
DC C5 C6 doub N N 110
DC C5 H5 sing N N 111
DC C6 H6 sing N N 112
DG OP3 P sing N N 113
DG OP3 HOP3 sing N N 114
DG P OP1 doub N N 115
DG P OP2 sing N N 116
DG P "O5'" sing N N 117
DG OP2 HOP2 sing N N 118
DG "O5'" "C5'" sing N N 119
DG "C5'" "C4'" sing N N 120
DG "C5'" "H5'" sing N N 121
DG "C5'" "H5''" sing N N 122
DG "C4'" "O4'" sing N N 123
DG "C4'" "C3'" sing N N 124
DG "C4'" "H4'" sing N N 125
DG "O4'" "C1'" sing N N 126
DG "C3'" "O3'" sing N N 127
DG "C3'" "C2'" sing N N 128
DG "C3'" "H3'" sing N N 129
DG "O3'" "HO3'" sing N N 130
DG "C2'" "C1'" sing N N 131
DG "C2'" "H2'" sing N N 132
DG "C2'" "H2''" sing N N 133
DG "C1'" N9 sing N N 134
DG "C1'" "H1'" sing N N 135
DG N9 C8 sing Y N 136
DG N9 C4 sing Y N 137
DG C8 N7 doub Y N 138
DG C8 H8 sing N N 139
DG N7 C5 sing Y N 140
DG C5 C6 sing N N 141
DG C5 C4 doub Y N 142
DG C6 O6 doub N N 143
DG C6 N1 sing N N 144
DG N1 C2 sing N N 145
DG N1 H1 sing N N 146
DG C2 N2 sing N N 147
DG C2 N3 doub N N 148
DG N2 H21 sing N N 149
DG N2 H22 sing N N 150
DG N3 C4 sing N N 151
DOD O D1 sing N N 152
DOD O D2 sing N N 153
DT OP3 P sing N N 154
DT OP3 HOP3 sing N N 155
DT P OP1 doub N N 156
DT P OP2 sing N N 157
DT P "O5'" sing N N 158
DT OP2 HOP2 sing N N 159
DT "O5'" "C5'" sing N N 160
DT "C5'" "C4'" sing N N 161
DT "C5'" "H5'" sing N N 162
DT "C5'" "H5''" sing N N 163
DT "C4'" "O4'" sing N N 164
DT "C4'" "C3'" sing N N 165
DT "C4'" "H4'" sing N N 166
DT "O4'" "C1'" sing N N 167
DT "C3'" "O3'" sing N N 168
DT "C3'" "C2'" sing N N 169
DT "C3'" "H3'" sing N N 170
DT "O3'" "HO3'" sing N N 171
DT "C2'" "C1'" sing N N 172
DT "C2'" "H2'" sing N N 173
DT "C2'" "H2''" sing N N 174
DT "C1'" N1 sing N N 175
DT "C1'" "H1'" sing N N 176
DT N1 C2 sing N N 177
DT N1 C6 sing N N 178
DT C2 O2 doub N N 179
DT C2 N3 sing N N 180
DT N3 C4 sing N N 181
DT N3 H3 sing N N 182
DT C4 O4 doub N N 183
DT C4 C5 sing N N 184
DT C5 C7 sing N N 185
DT C5 C6 doub N N 186
DT C7 H71 sing N N 187
DT C7 H72 sing N N 188
DT C7 H73 sing N N 189
DT C6 H6 sing N N 190
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2 'MAGNESIUM ION' MG
3 water DOD
#
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'experimental model'
_pdbx_initial_refinement_model.source_name PDB
_pdbx_initial_refinement_model.accession_code 4FP6
_pdbx_initial_refinement_model.details ?
#
_pdbx_struct_assembly_auth_evidence.id 1
_pdbx_struct_assembly_auth_evidence.assembly_id 1
_pdbx_struct_assembly_auth_evidence.experimental_support none
_pdbx_struct_assembly_auth_evidence.details ?
#
loop_
_refine_funct_minimized.pdbx_refine_id
_refine_funct_minimized.type
'X-RAY DIFFRACTION' 'Joint X-ray/neutron ML'
'NEUTRON DIFFRACTION' 'Joint X-ray/neutron ML'
#