data_6CF4
#
_entry.id 6CF4
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.398
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 6CF4 pdb_00006cf4 10.2210/pdb6cf4/pdb
WWPDB D_1000232635 ? ?
EMDB EMD-7466 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2018-05-23
2 'Structure model' 1 1 2018-06-06
3 'Structure model' 1 2 2018-06-13
4 'Structure model' 1 3 2019-12-18
5 'Structure model' 1 4 2021-06-30
6 'Structure model' 1 5 2024-11-06
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Data collection'
2 2 'Structure model' 'Database references'
3 3 'Structure model' 'Data collection'
4 3 'Structure model' 'Database references'
5 4 'Structure model' 'Author supporting evidence'
6 5 'Structure model' 'Data collection'
7 6 'Structure model' 'Data collection'
8 6 'Structure model' 'Database references'
9 6 'Structure model' 'Structure summary'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 2 'Structure model' citation
2 2 'Structure model' citation_author
3 3 'Structure model' citation
4 4 'Structure model' pdbx_audit_support
5 5 'Structure model' diffrn_detector
6 6 'Structure model' chem_comp_atom
7 6 'Structure model' chem_comp_bond
8 6 'Structure model' database_2
9 6 'Structure model' em_admin
10 6 'Structure model' pdbx_entry_details
11 6 'Structure model' pdbx_modification_feature
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 2 'Structure model' '_citation.journal_abbrev'
2 2 'Structure model' '_citation.pdbx_database_id_PubMed'
3 2 'Structure model' '_citation.title'
4 3 'Structure model' '_citation.journal_volume'
5 3 'Structure model' '_citation.page_first'
6 3 'Structure model' '_citation.page_last'
7 4 'Structure model' '_pdbx_audit_support.funding_organization'
8 5 'Structure model' '_diffrn_detector.detector'
9 6 'Structure model' '_database_2.pdbx_DOI'
10 6 'Structure model' '_database_2.pdbx_database_accession'
11 6 'Structure model' '_em_admin.last_update'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.entry_id 6CF4
_pdbx_database_status.recvd_initial_deposition_date 2018-02-13
_pdbx_database_status.SG_entry N
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_nmr_data ?
#
loop_
_pdbx_database_related.db_name
_pdbx_database_related.details
_pdbx_database_related.db_id
_pdbx_database_related.content_type
PDB . 5WHN unspecified
PDB . 5WKB unspecified
PDB . 5WHP unspecified
EMDB
;Segment NFGTFS, with familial mutation A315T and phosphorylated threonine, from the low complexity domain of TDP-43, residues 312-317
;
EMD-7466 'associated EM volume'
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
_audit_author.identifier_ORCID
'Guenther, E.L.' 1 ?
'Cao, Q.' 2 ?
'Boyer, D.R.' 3 ?
'Sawaya, M.R.' 4 ?
'Eisenberg, D.S.' 5 ?
#
_citation.abstract ?
_citation.abstract_id_CAS ?
_citation.book_id_ISBN ?
_citation.book_publisher ?
_citation.book_publisher_city ?
_citation.book_title ?
_citation.coordinate_linkage ?
_citation.country US
_citation.database_id_Medline ?
_citation.details ?
_citation.id primary
_citation.journal_abbrev 'Nat. Struct. Mol. Biol.'
_citation.journal_id_ASTM ?
_citation.journal_id_CSD ?
_citation.journal_id_ISSN 1545-9985
_citation.journal_full ?
_citation.journal_issue ?
_citation.journal_volume 25
_citation.language ?
_citation.page_first 463
_citation.page_last 471
_citation.title
'Atomic structures of TDP-43 LCD segments and insights into reversible or pathogenic aggregation.'
_citation.year 2018
_citation.database_id_CSD ?
_citation.pdbx_database_id_DOI 10.1038/s41594-018-0064-2
_citation.pdbx_database_id_PubMed 29786080
_citation.unpublished_flag ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Guenther, E.L.' 1 ?
primary 'Cao, Q.' 2 ?
primary 'Trinh, H.' 3 ?
primary 'Lu, J.' 4 ?
primary 'Sawaya, M.R.' 5 ?
primary 'Cascio, D.' 6 ?
primary 'Boyer, D.R.' 7 ?
primary 'Rodriguez, J.A.' 8 ?
primary 'Hughes, M.P.' 9 ?
primary 'Eisenberg, D.S.' 10 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn NFGTFS 751.679 1 ? ? ? ?
2 water nat water 18.015 1 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer yes
_entity_poly.pdbx_seq_one_letter_code 'NFG(TPO)FS'
_entity_poly.pdbx_seq_one_letter_code_can NFGTFS
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
_pdbx_entity_nonpoly.entity_id 2
_pdbx_entity_nonpoly.name water
_pdbx_entity_nonpoly.comp_id HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 ASN n
1 2 PHE n
1 3 GLY n
1 4 TPO n
1 5 PHE n
1 6 SER n
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num 1
_pdbx_entity_src_syn.pdbx_end_seq_num 6
_pdbx_entity_src_syn.organism_scientific 'Homo sapiens'
_pdbx_entity_src_syn.organism_common_name ?
_pdbx_entity_src_syn.ncbi_taxonomy_id 9606
_pdbx_entity_src_syn.details
'Synthetic peptide NFGpTFS corresponding tosegment 312-317 of TDP-43, with phosphorylated threonine'
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067
HOH non-polymer . WATER ? 'H2 O' 18.015
PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189
SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093
TPO 'L-peptide linking' n PHOSPHOTHREONINE PHOSPHONOTHREONINE 'C4 H10 N O6 P' 199.099
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 ASN 1 312 312 ASN ASN A . n
A 1 2 PHE 2 313 313 PHE PHE A . n
A 1 3 GLY 3 314 314 GLY GLY A . n
A 1 4 TPO 4 315 315 TPO TPO A . n
A 1 5 PHE 5 316 316 PHE PHE A . n
A 1 6 SER 6 317 317 SER SER A . n
#
_pdbx_nonpoly_scheme.asym_id B
_pdbx_nonpoly_scheme.entity_id 2
_pdbx_nonpoly_scheme.mon_id HOH
_pdbx_nonpoly_scheme.ndb_seq_num 1
_pdbx_nonpoly_scheme.pdb_seq_num 401
_pdbx_nonpoly_scheme.auth_seq_num 1
_pdbx_nonpoly_scheme.pdb_mon_id HOH
_pdbx_nonpoly_scheme.auth_mon_id HOH
_pdbx_nonpoly_scheme.pdb_strand_id A
_pdbx_nonpoly_scheme.pdb_ins_code .
#
loop_
_software.citation_id
_software.classification
_software.compiler_name
_software.compiler_version
_software.contact_author
_software.contact_author_email
_software.date
_software.description
_software.dependencies
_software.hardware
_software.language
_software.location
_software.mods
_software.name
_software.os
_software.os_version
_software.type
_software.version
_software.pdbx_ordinal
? 'data reduction' ? ? 'Wolfgang Kabsch' Wolfgang.Kabsch@mpimf-heidelberg.mpg.de ? ? ? ? ?
http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/ ? XDS ? ? package . 1
? 'data scaling' ? ? 'Wolfgang Kabsch' ? ? ? ? ? ?
http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? XSCALE ? ? package . 2
? refinement ? ? 'Paul D. Adams' PDAdams@lbl.gov ? ? ? ? C++
http://www.phenix-online.org/ ? PHENIX ? ? package . 3
? 'data extraction' ? ? PDB deposit@deposit.rcsb.org 'Sep. 1, 2017' ? ? ? C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/ ? PDB_EXTRACT ? ? package 3.24 4
#
_cell.angle_alpha 90.000
_cell.angle_alpha_esd ?
_cell.angle_beta 90.000
_cell.angle_beta_esd ?
_cell.angle_gamma 90.000
_cell.angle_gamma_esd ?
_cell.entry_id 6CF4
_cell.details ?
_cell.formula_units_Z ?
_cell.length_a 23.650
_cell.length_a_esd ?
_cell.length_b 4.720
_cell.length_b_esd ?
_cell.length_c 30.060
_cell.length_c_esd ?
_cell.volume ?
_cell.volume_esd ?
_cell.Z_PDB 4
_cell.reciprocal_angle_alpha ?
_cell.reciprocal_angle_beta ?
_cell.reciprocal_angle_gamma ?
_cell.reciprocal_angle_alpha_esd ?
_cell.reciprocal_angle_beta_esd ?
_cell.reciprocal_angle_gamma_esd ?
_cell.reciprocal_length_a ?
_cell.reciprocal_length_b ?
_cell.reciprocal_length_c ?
_cell.reciprocal_length_a_esd ?
_cell.reciprocal_length_b_esd ?
_cell.reciprocal_length_c_esd ?
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 6CF4
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 19
_symmetry.space_group_name_Hall ?
_symmetry.space_group_name_H-M 'P 21 21 21'
_symmetry.pdbx_full_space_group_name_H-M ?
#
_exptl.absorpt_coefficient_mu ?
_exptl.absorpt_correction_T_max ?
_exptl.absorpt_correction_T_min ?
_exptl.absorpt_correction_type ?
_exptl.absorpt_process_details ?
_exptl.entry_id 6CF4
_exptl.crystals_number ?
_exptl.details ?
_exptl.method 'ELECTRON CRYSTALLOGRAPHY'
_exptl.method_details ?
#
_exptl_crystal.colour ?
_exptl_crystal.density_diffrn ?
_exptl_crystal.density_Matthews ?
_exptl_crystal.density_method ?
_exptl_crystal.density_percent_sol ?
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.id 1
_exptl_crystal.preparation ?
_exptl_crystal.size_max ?
_exptl_crystal.size_mid ?
_exptl_crystal.size_min ?
_exptl_crystal.size_rad ?
_exptl_crystal.colour_lustre ?
_exptl_crystal.colour_modifier ?
_exptl_crystal.colour_primary ?
_exptl_crystal.density_meas ?
_exptl_crystal.density_meas_esd ?
_exptl_crystal.density_meas_gt ?
_exptl_crystal.density_meas_lt ?
_exptl_crystal.density_meas_temp ?
_exptl_crystal.density_meas_temp_esd ?
_exptl_crystal.density_meas_temp_gt ?
_exptl_crystal.density_meas_temp_lt ?
_exptl_crystal.pdbx_crystal_image_url ?
_exptl_crystal.pdbx_crystal_image_format ?
_exptl_crystal.pdbx_mosaicity ?
_exptl_crystal.pdbx_mosaicity_esd ?
#
_exptl_crystal_grow.apparatus ?
_exptl_crystal_grow.atmosphere ?
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.details ?
_exptl_crystal_grow.method Batch
_exptl_crystal_grow.method_ref ?
_exptl_crystal_grow.pH 7.5
_exptl_crystal_grow.pressure ?
_exptl_crystal_grow.pressure_esd ?
_exptl_crystal_grow.seeding ?
_exptl_crystal_grow.seeding_ref ?
_exptl_crystal_grow.temp 310
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.temp_esd ?
_exptl_crystal_grow.time ?
_exptl_crystal_grow.pdbx_details '1X PBS 7.5'
_exptl_crystal_grow.pdbx_pH_range ?
#
_diffrn.ambient_environment ?
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.ambient_temp_esd ?
_diffrn.crystal_id 1
_diffrn.crystal_support ?
_diffrn.crystal_treatment ?
_diffrn.details ?
_diffrn.id 1
_diffrn.ambient_pressure ?
_diffrn.ambient_pressure_esd ?
_diffrn.ambient_pressure_gt ?
_diffrn.ambient_pressure_lt ?
_diffrn.ambient_temp_gt ?
_diffrn.ambient_temp_lt ?
_diffrn.pdbx_serial_crystal_experiment ?
#
_diffrn_detector.details ?
_diffrn_detector.detector CMOS
_diffrn_detector.diffrn_id 1
_diffrn_detector.type 'TVIPS F416 CMOS CAMERA'
_diffrn_detector.area_resol_mean ?
_diffrn_detector.dtime ?
_diffrn_detector.pdbx_frames_total ?
_diffrn_detector.pdbx_collection_time_total ?
_diffrn_detector.pdbx_collection_date 2018-01-09
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 0.0251
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.current ?
_diffrn_source.details ?
_diffrn_source.diffrn_id 1
_diffrn_source.power ?
_diffrn_source.size ?
_diffrn_source.source 'TRANSMISSION ELECTRON MICROSCOPE'
_diffrn_source.target ?
_diffrn_source.type 'TECNAI F20 TEM'
_diffrn_source.voltage ?
_diffrn_source.take-off_angle ?
_diffrn_source.pdbx_wavelength_list 0.0251
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_synchrotron_beamline ?
_diffrn_source.pdbx_synchrotron_site ?
#
_reflns.B_iso_Wilson_estimate 40.550
_reflns.entry_id 6CF4
_reflns.data_reduction_details ?
_reflns.data_reduction_method ?
_reflns.d_resolution_high 0.750
_reflns.d_resolution_low 7.645
_reflns.details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.number_all ?
_reflns.number_obs 4177
_reflns.observed_criterion ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.observed_criterion_I_max ?
_reflns.observed_criterion_I_min ?
_reflns.observed_criterion_sigma_F ?
_reflns.observed_criterion_sigma_I ?
_reflns.percent_possible_obs 86.600
_reflns.R_free_details ?
_reflns.Rmerge_F_all ?
_reflns.Rmerge_F_obs ?
_reflns.Friedel_coverage ?
_reflns.number_gt ?
_reflns.threshold_expression ?
_reflns.pdbx_redundancy 3.804
_reflns.pdbx_Rmerge_I_obs 0.172
_reflns.pdbx_Rmerge_I_all ?
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_av_sigmaI ?
_reflns.pdbx_netI_over_sigmaI 3.900
_reflns.pdbx_res_netI_over_av_sigmaI_2 ?
_reflns.pdbx_res_netI_over_sigmaI_2 ?
_reflns.pdbx_chi_squared 0.958
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_d_res_high_opt ?
_reflns.pdbx_d_res_low_opt ?
_reflns.pdbx_d_res_opt_method ?
_reflns.phase_calculation_details ?
_reflns.pdbx_Rrim_I_all 0.203
_reflns.pdbx_Rpim_I_all ?
_reflns.pdbx_d_opt ?
_reflns.pdbx_number_measured_all 15891
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
_reflns.pdbx_CC_half 0.989
_reflns.pdbx_R_split ?
#
loop_
_reflns_shell.d_res_high
_reflns_shell.d_res_low
_reflns_shell.meanI_over_sigI_all
_reflns_shell.meanI_over_sigI_obs
_reflns_shell.number_measured_all
_reflns_shell.number_measured_obs
_reflns_shell.number_possible
_reflns_shell.number_unique_all
_reflns_shell.number_unique_obs
_reflns_shell.percent_possible_all
_reflns_shell.percent_possible_obs
_reflns_shell.Rmerge_F_all
_reflns_shell.Rmerge_F_obs
_reflns_shell.Rmerge_I_all
_reflns_shell.Rmerge_I_obs
_reflns_shell.meanI_over_sigI_gt
_reflns_shell.meanI_over_uI_all
_reflns_shell.meanI_over_uI_gt
_reflns_shell.number_measured_gt
_reflns_shell.number_unique_gt
_reflns_shell.percent_possible_gt
_reflns_shell.Rmerge_F_gt
_reflns_shell.Rmerge_I_gt
_reflns_shell.pdbx_redundancy
_reflns_shell.pdbx_Rsym_value
_reflns_shell.pdbx_chi_squared
_reflns_shell.pdbx_netI_over_sigmaI_all
_reflns_shell.pdbx_netI_over_sigmaI_obs
_reflns_shell.pdbx_Rrim_I_all
_reflns_shell.pdbx_Rpim_I_all
_reflns_shell.pdbx_rejects
_reflns_shell.pdbx_ordinal
_reflns_shell.pdbx_diffrn_id
_reflns_shell.pdbx_CC_half
_reflns_shell.pdbx_R_split
0.750 0.770 ? 1.280 ? 1259 360 ? 314 87.200 ? ? ? ? 0.661 ? ? ? ? ? ? ? ? 4.010 ? ? ? ? 0.757 ? ? 1 1 0.599 ?
0.770 0.790 ? 1.430 ? 1271 352 ? 310 88.100 ? ? ? ? 0.668 ? ? ? ? ? ? ? ? 4.100 ? ? ? ? 0.770 ? ? 2 1 0.533 ?
0.790 0.810 ? 1.350 ? 974 306 ? 268 87.600 ? ? ? ? 0.656 ? ? ? ? ? ? ? ? 3.634 ? ? ? ? 0.772 ? ? 3 1 0.474 ?
0.810 0.840 ? 1.530 ? 1019 301 ? 265 88.000 ? ? ? ? 0.633 ? ? ? ? ? ? ? ? 3.845 ? ? ? ? 0.730 ? ? 4 1 0.625 ?
0.840 0.870 ? 1.830 ? 1032 303 ? 263 86.800 ? ? ? ? 0.559 ? ? ? ? ? ? ? ? 3.924 ? ? ? ? 0.645 ? ? 5 1 0.646 ?
0.870 0.900 ? 2.580 ? 1082 305 ? 268 87.900 ? ? ? ? 0.420 ? ? ? ? ? ? ? ? 4.037 ? ? ? ? 0.484 ? ? 6 1 0.788 ?
0.900 0.930 ? 3.480 ? 1146 306 ? 270 88.200 ? ? ? ? 0.302 ? ? ? ? ? ? ? ? 4.244 ? ? ? ? 0.341 ? ? 7 1 0.903 ?
0.930 0.970 ? 3.360 ? 901 277 ? 244 88.100 ? ? ? ? 0.304 ? ? ? ? ? ? ? ? 3.693 ? ? ? ? 0.353 ? ? 8 1 0.864 ?
0.970 1.010 ? 3.370 ? 808 258 ? 224 86.800 ? ? ? ? 0.341 ? ? ? ? ? ? ? ? 3.607 ? ? ? ? 0.405 ? ? 9 1 0.832 ?
1.010 1.060 ? 4.480 ? 835 251 ? 218 86.900 ? ? ? ? 0.273 ? ? ? ? ? ? ? ? 3.830 ? ? ? ? 0.320 ? ? 10 1 0.872 ?
1.060 1.120 ? 5.190 ? 912 259 ? 227 87.600 ? ? ? ? 0.214 ? ? ? ? ? ? ? ? 4.018 ? ? ? ? 0.247 ? ? 11 1 0.969 ?
1.120 1.190 ? 5.710 ? 915 253 ? 222 87.700 ? ? ? ? 0.213 ? ? ? ? ? ? ? ? 4.122 ? ? ? ? 0.248 ? ? 12 1 0.953 ?
1.190 1.270 ? 5.610 ? 593 208 ? 175 84.100 ? ? ? ? 0.177 ? ? ? ? ? ? ? ? 3.389 ? ? ? ? 0.211 ? ? 13 1 0.958 ?
1.270 1.370 ? 5.480 ? 597 204 ? 178 87.300 ? ? ? ? 0.200 ? ? ? ? ? ? ? ? 3.354 ? ? ? ? 0.239 ? ? 14 1 0.942 ?
1.370 1.500 ? 6.700 ? 688 207 ? 177 85.500 ? ? ? ? 0.184 ? ? ? ? ? ? ? ? 3.887 ? ? ? ? 0.216 ? ? 15 1 0.929 ?
1.500 1.680 ? 7.210 ? 573 179 ? 156 87.200 ? ? ? ? 0.151 ? ? ? ? ? ? ? ? 3.673 ? ? ? ? 0.181 ? ? 16 1 0.929 ?
1.680 1.940 ? 7.090 ? 382 152 ? 127 83.600 ? ? ? ? 0.143 ? ? ? ? ? ? ? ? 3.008 ? ? ? ? 0.174 ? ? 17 1 0.929 ?
1.940 2.370 ? 8.650 ? 505 161 ? 134 83.200 ? ? ? ? 0.129 ? ? ? ? ? ? ? ? 3.769 ? ? ? ? 0.150 ? ? 18 1 0.976 ?
2.370 3.360 ? 8.710 ? 239 102 ? 82 80.400 ? ? ? ? 0.082 ? ? ? ? ? ? ? ? 2.915 ? ? ? ? 0.102 ? ? 19 1 0.983 ?
3.360 7.645 ? 9.550 ? 160 78 ? 55 70.500 ? ? ? ? 0.068 ? ? ? ? ? ? ? ? 2.909 ? ? ? ? 0.082 ? ? 20 1 0.991 ?
#
_refine.aniso_B[1][1] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[2][3] ?
_refine.aniso_B[3][3] ?
_refine.B_iso_max 170.860
_refine.B_iso_mean 12.1080
_refine.B_iso_min 0.000
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.details ?
_refine.diff_density_max ?
_refine.diff_density_max_esd ?
_refine.diff_density_min ?
_refine.diff_density_min_esd ?
_refine.diff_density_rms ?
_refine.diff_density_rms_esd ?
_refine.entry_id 6CF4
_refine.pdbx_refine_id 'ELECTRON CRYSTALLOGRAPHY'
_refine.ls_abs_structure_details ?
_refine.ls_abs_structure_Flack ?
_refine.ls_abs_structure_Flack_esd ?
_refine.ls_abs_structure_Rogers ?
_refine.ls_abs_structure_Rogers_esd ?
_refine.ls_d_res_high 0.7500
_refine.ls_d_res_low 7.6450
_refine.ls_extinction_coef ?
_refine.ls_extinction_coef_esd ?
_refine.ls_extinction_expression ?
_refine.ls_extinction_method ?
_refine.ls_goodness_of_fit_all ?
_refine.ls_goodness_of_fit_all_esd ?
_refine.ls_goodness_of_fit_obs ?
_refine.ls_goodness_of_fit_obs_esd ?
_refine.ls_hydrogen_treatment ?
_refine.ls_matrix_type ?
_refine.ls_number_constraints ?
_refine.ls_number_parameters ?
_refine.ls_number_reflns_all ?
_refine.ls_number_reflns_obs 4178
_refine.ls_number_reflns_R_free 428
_refine.ls_number_reflns_R_work ?
_refine.ls_number_restraints ?
_refine.ls_percent_reflns_obs 86.7700
_refine.ls_percent_reflns_R_free 10.2400
_refine.ls_R_factor_all ?
_refine.ls_R_factor_obs 0.2346
_refine.ls_R_factor_R_free 0.2512
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_R_factor_R_work 0.2324
_refine.ls_R_Fsqd_factor_obs ?
_refine.ls_R_I_factor_obs ?
_refine.ls_redundancy_reflns_all ?
_refine.ls_redundancy_reflns_obs ?
_refine.ls_restrained_S_all ?
_refine.ls_restrained_S_obs ?
_refine.ls_shift_over_esd_max ?
_refine.ls_shift_over_esd_mean ?
_refine.ls_structure_factor_coef ?
_refine.ls_weighting_details ?
_refine.ls_weighting_scheme ?
_refine.ls_wR_factor_all ?
_refine.ls_wR_factor_obs ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.occupancy_max ?
_refine.occupancy_min ?
_refine.solvent_model_details ?
_refine.solvent_model_param_bsol ?
_refine.solvent_model_param_ksol ?
_refine.ls_R_factor_gt ?
_refine.ls_goodness_of_fit_gt ?
_refine.ls_goodness_of_fit_ref ?
_refine.ls_shift_over_su_max ?
_refine.ls_shift_over_su_max_lt ?
_refine.ls_shift_over_su_mean ?
_refine.ls_shift_over_su_mean_lt ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 1.380
_refine.pdbx_ls_sigma_Fsqd ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.pdbx_method_to_determine_struct ?
_refine.pdbx_starting_model ?
_refine.pdbx_stereochemistry_target_values ?
_refine.pdbx_R_Free_selection_details ?
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.pdbx_solvent_vdw_probe_radii 1.1100
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii 0.9000
_refine.pdbx_real_space_R ?
_refine.pdbx_density_correlation ?
_refine.pdbx_pd_number_of_powder_patterns ?
_refine.pdbx_pd_number_of_points ?
_refine.pdbx_pd_meas_number_of_points ?
_refine.pdbx_pd_proc_ls_prof_R_factor ?
_refine.pdbx_pd_proc_ls_prof_wR_factor ?
_refine.pdbx_pd_Marquardt_correlation_coeff ?
_refine.pdbx_pd_Fsqrd_R_factor ?
_refine.pdbx_pd_ls_matrix_band_width ?
_refine.pdbx_overall_phase_error 30.2100
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_diffrn_id 1
_refine.overall_SU_B ?
_refine.overall_SU_ML 0.1100
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_average_fsc_overall ?
_refine.pdbx_average_fsc_work ?
_refine.pdbx_average_fsc_free ?
#
_refine_hist.cycle_id final
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.d_res_high 0.7500
_refine_hist.d_res_low 7.6450
_refine_hist.pdbx_number_atoms_ligand 0
_refine_hist.number_atoms_solvent 1
_refine_hist.number_atoms_total 53
_refine_hist.pdbx_number_residues_total 6
_refine_hist.pdbx_B_iso_mean_solvent 3.07
_refine_hist.pdbx_number_atoms_protein 52
_refine_hist.pdbx_number_atoms_nucleic_acid 0
#
loop_
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.criterion
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.number
_refine_ls_restr.rejects
_refine_ls_restr.type
_refine_ls_restr.weight
_refine_ls_restr.pdbx_restraint_function
'ELECTRON CRYSTALLOGRAPHY' ? 0.021 ? 53 ? f_bond_d ? ?
'ELECTRON CRYSTALLOGRAPHY' ? 2.042 ? 72 ? f_angle_d ? ?
'ELECTRON CRYSTALLOGRAPHY' ? 0.110 ? 6 ? f_chiral_restr ? ?
'ELECTRON CRYSTALLOGRAPHY' ? 0.008 ? 9 ? f_plane_restr ? ?
'ELECTRON CRYSTALLOGRAPHY' ? 32.500 ? 16 ? f_dihedral_angle_d ? ?
#
loop_
_refine_ls_shell.pdbx_refine_id
_refine_ls_shell.d_res_high
_refine_ls_shell.d_res_low
_refine_ls_shell.number_reflns_all
_refine_ls_shell.number_reflns_obs
_refine_ls_shell.number_reflns_R_free
_refine_ls_shell.number_reflns_R_work
_refine_ls_shell.percent_reflns_obs
_refine_ls_shell.percent_reflns_R_free
_refine_ls_shell.R_factor_all
_refine_ls_shell.R_factor_obs
_refine_ls_shell.R_factor_R_free
_refine_ls_shell.R_factor_R_free_error
_refine_ls_shell.R_factor_R_work
_refine_ls_shell.redundancy_reflns_all
_refine_ls_shell.redundancy_reflns_obs
_refine_ls_shell.wR_factor_all
_refine_ls_shell.wR_factor_obs
_refine_ls_shell.wR_factor_R_free
_refine_ls_shell.wR_factor_R_work
_refine_ls_shell.pdbx_total_number_of_bins_used
_refine_ls_shell.pdbx_phase_error
_refine_ls_shell.pdbx_fsc_work
_refine_ls_shell.pdbx_fsc_free
'ELECTRON CRYSTALLOGRAPHY' 0.7503 0.8588 1348 . 139 1209 88.0000 . . . 0.4023 0.0000 0.3819 . . . . . . 3 . . .
'ELECTRON CRYSTALLOGRAPHY' 0.8588 1.0815 1378 . 137 1241 88.0000 . . . 0.2774 0.0000 0.2828 . . . . . . 3 . . .
'ELECTRON CRYSTALLOGRAPHY' 1.0815 7.6450 1452 . 152 1300 85.0000 . . . 0.2098 0.0000 0.1861 . . . . . . 3 . . .
#
_struct.entry_id 6CF4
_struct.title
;Segment NFGTFS, with familial mutation A315T and phosphorylated threonine, from the low complexity domain of TDP-43, residues 312-317
;
_struct.pdbx_model_details ?
_struct.pdbx_formula_weight ?
_struct.pdbx_formula_weight_method ?
_struct.pdbx_model_type_details ?
_struct.pdbx_CASP_flag N
#
_struct_keywords.entry_id 6CF4
_struct_keywords.text 'Amyloid, LARKS, Reversible aggregation, PROTEIN FIBRIL'
_struct_keywords.pdbx_keywords 'PROTEIN FIBRIL'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
#
_struct_ref.id 1
_struct_ref.db_name PDB
_struct_ref.db_code 6CF4
_struct_ref.pdbx_db_accession 6CF4
_struct_ref.pdbx_db_isoform ?
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_align_begin 1
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 6CF4
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 6
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession 6CF4
_struct_ref_seq.db_align_beg 312
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 317
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 312
_struct_ref_seq.pdbx_auth_seq_align_end 317
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details decameric
_pdbx_struct_assembly.oligomeric_count 10
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8,9,10
_pdbx_struct_assembly_gen.asym_id_list A,B
#
_pdbx_struct_assembly_auth_evidence.id 1
_pdbx_struct_assembly_auth_evidence.assembly_id 1
_pdbx_struct_assembly_auth_evidence.experimental_support none
_pdbx_struct_assembly_auth_evidence.details ?
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 1_565 x,y+1,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
1.0000000000 0.0000000000 4.7200000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
3 'crystal symmetry operation' 1_575 x,y+2,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
1.0000000000 0.0000000000 9.4400000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
4 'crystal symmetry operation' 1_545 x,y-1,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
1.0000000000 0.0000000000 -4.7200000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
5 'crystal symmetry operation' 1_535 x,y-2,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
1.0000000000 0.0000000000 -9.4400000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
6 'crystal symmetry operation' 3_565 -x,y+3/2,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
1.0000000000 0.0000000000 7.0800000000 0.0000000000 0.0000000000 -1.0000000000 15.0300000000
7 'crystal symmetry operation' 3_555 -x,y+1/2,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
1.0000000000 0.0000000000 2.3600000000 0.0000000000 0.0000000000 -1.0000000000 15.0300000000
8 'crystal symmetry operation' 3_545 -x,y-1/2,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
1.0000000000 0.0000000000 -2.3600000000 0.0000000000 0.0000000000 -1.0000000000 15.0300000000
9 'crystal symmetry operation' 3_535 -x,y-3/2,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
1.0000000000 0.0000000000 -7.0800000000 0.0000000000 0.0000000000 -1.0000000000 15.0300000000
10 'crystal symmetry operation' 3_525 -x,y-5/2,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
1.0000000000 0.0000000000 -11.8000000000 0.0000000000 0.0000000000 -1.0000000000 15.0300000000
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
covale1 covale both ? A GLY 3 C ? ? ? 1_555 A TPO 4 N ? ? A GLY 314 A TPO 315 1_555 ? ? ? ? ? ? ? 1.315 ? ?
covale2 covale both ? A TPO 4 C ? ? ? 1_555 A PHE 5 N ? ? A TPO 315 A PHE 316 1_555 ? ? ? ? ? ? ? 1.320 ? ?
#
_struct_conn_type.id covale
_struct_conn_type.criteria ?
_struct_conn_type.reference ?
#
_pdbx_modification_feature.ordinal 1
_pdbx_modification_feature.label_comp_id TPO
_pdbx_modification_feature.label_asym_id A
_pdbx_modification_feature.label_seq_id 4
_pdbx_modification_feature.label_alt_id ?
_pdbx_modification_feature.modified_residue_label_comp_id .
_pdbx_modification_feature.modified_residue_label_asym_id .
_pdbx_modification_feature.modified_residue_label_seq_id .
_pdbx_modification_feature.modified_residue_label_alt_id .
_pdbx_modification_feature.auth_comp_id TPO
_pdbx_modification_feature.auth_asym_id A
_pdbx_modification_feature.auth_seq_id 315
_pdbx_modification_feature.PDB_ins_code ?
_pdbx_modification_feature.symmetry 1_555
_pdbx_modification_feature.modified_residue_auth_comp_id .
_pdbx_modification_feature.modified_residue_auth_asym_id .
_pdbx_modification_feature.modified_residue_auth_seq_id .
_pdbx_modification_feature.modified_residue_PDB_ins_code .
_pdbx_modification_feature.modified_residue_symmetry .
_pdbx_modification_feature.comp_id_linking_atom .
_pdbx_modification_feature.modified_residue_id_linking_atom .
_pdbx_modification_feature.modified_residue_id THR
_pdbx_modification_feature.ref_pcm_id 1
_pdbx_modification_feature.ref_comp_id TPO
_pdbx_modification_feature.type Phosphorylation
_pdbx_modification_feature.category 'Named protein modification'
#
_pdbx_entry_details.entry_id 6CF4
_pdbx_entry_details.compound_details ?
_pdbx_entry_details.source_details ?
_pdbx_entry_details.nonpolymer_details ?
_pdbx_entry_details.sequence_details ?
_pdbx_entry_details.has_ligand_of_interest ?
_pdbx_entry_details.has_protein_modification Y
#
_pdbx_validate_symm_contact.id 1
_pdbx_validate_symm_contact.PDB_model_num 1
_pdbx_validate_symm_contact.auth_atom_id_1 O1P
_pdbx_validate_symm_contact.auth_asym_id_1 A
_pdbx_validate_symm_contact.auth_comp_id_1 TPO
_pdbx_validate_symm_contact.auth_seq_id_1 315
_pdbx_validate_symm_contact.PDB_ins_code_1 ?
_pdbx_validate_symm_contact.label_alt_id_1 ?
_pdbx_validate_symm_contact.site_symmetry_1 1_555
_pdbx_validate_symm_contact.auth_atom_id_2 HOP2
_pdbx_validate_symm_contact.auth_asym_id_2 A
_pdbx_validate_symm_contact.auth_comp_id_2 TPO
_pdbx_validate_symm_contact.auth_seq_id_2 315
_pdbx_validate_symm_contact.PDB_ins_code_2 ?
_pdbx_validate_symm_contact.label_alt_id_2 ?
_pdbx_validate_symm_contact.site_symmetry_2 1_545
_pdbx_validate_symm_contact.dist 1.52
#
_em_3d_fitting.entry_id 6CF4
_em_3d_fitting.id 1
_em_3d_fitting.details ?
_em_3d_fitting.overall_b_value 19.6
_em_3d_fitting.ref_protocol OTHER
_em_3d_fitting.ref_space RECIPROCAL
_em_3d_fitting.target_criteria 'maximum likihood'
_em_3d_fitting.method ?
#
_em_3d_reconstruction.entry_id 6CF4
_em_3d_reconstruction.id 1
_em_3d_reconstruction.algorithm ?
_em_3d_reconstruction.details
;Density map was obtained using measured diffraction intensities and phases acquired from a crystallographic direct methods program, shelxd.
;
_em_3d_reconstruction.refinement_type ?
_em_3d_reconstruction.image_processing_id 1
_em_3d_reconstruction.num_class_averages ?
_em_3d_reconstruction.num_particles ?
_em_3d_reconstruction.resolution ?
_em_3d_reconstruction.resolution_method 'DIFFRACTION PATTERN/LAYERLINES'
_em_3d_reconstruction.symmetry_type '3D CRYSTAL'
_em_3d_reconstruction.method ?
_em_3d_reconstruction.nominal_pixel_size ?
_em_3d_reconstruction.actual_pixel_size ?
_em_3d_reconstruction.magnification_calibration ?
#
_em_buffer.id 1
_em_buffer.details ?
_em_buffer.pH 4
_em_buffer.specimen_id 1
_em_buffer.name ?
#
_em_entity_assembly.id 1
_em_entity_assembly.parent_id 0
_em_entity_assembly.details ?
_em_entity_assembly.name 'crystal of NFGTFS phosphorylated on threonine.'
_em_entity_assembly.source NATURAL
_em_entity_assembly.type COMPLEX
_em_entity_assembly.entity_id_list 1
_em_entity_assembly.synonym ?
_em_entity_assembly.oligomeric_details ?
#
_em_image_scans.entry_id 6CF4
_em_image_scans.id 1
_em_image_scans.dimension_height 4096
_em_image_scans.dimension_width 4096
_em_image_scans.frames_per_image ?
_em_image_scans.image_recording_id 1
_em_image_scans.sampling_size ?
_em_image_scans.scanner_model ?
_em_image_scans.used_frames_per_image ?
_em_image_scans.citation_id ?
_em_image_scans.number_digital_images ?
_em_image_scans.od_range ?
_em_image_scans.quant_bit_size ?
_em_image_scans.details ?
#
_em_imaging.id 1
_em_imaging.entry_id 6CF4
_em_imaging.accelerating_voltage 200
_em_imaging.alignment_procedure BASIC
_em_imaging.c2_aperture_diameter ?
_em_imaging.calibrated_defocus_max ?
_em_imaging.calibrated_defocus_min ?
_em_imaging.calibrated_magnification ?
_em_imaging.cryogen NITROGEN
_em_imaging.details ?
_em_imaging.electron_source 'FIELD EMISSION GUN'
_em_imaging.illumination_mode 'FLOOD BEAM'
_em_imaging.microscope_model 'FEI TECNAI F20'
_em_imaging.mode DIFFRACTION
_em_imaging.nominal_cs ?
_em_imaging.nominal_defocus_max ?
_em_imaging.nominal_defocus_min ?
_em_imaging.nominal_magnification ?
_em_imaging.recording_temperature_maximum 100
_em_imaging.recording_temperature_minimum 100
_em_imaging.residual_tilt ?
_em_imaging.specimen_holder_model 'GATAN 626 SINGLE TILT LIQUID NITROGEN CRYO TRANSFER HOLDER'
_em_imaging.specimen_id 1
_em_imaging.citation_id ?
_em_imaging.date ?
_em_imaging.temperature ?
_em_imaging.tilt_angle_min ?
_em_imaging.tilt_angle_max ?
_em_imaging.astigmatism ?
_em_imaging.detector_distance ?
_em_imaging.electron_beam_tilt_params ?
_em_imaging.specimen_holder_type ?
#
_em_sample_support.id 1
_em_sample_support.specimen_id 1
_em_sample_support.details ?
_em_sample_support.grid_material COPPER
_em_sample_support.grid_mesh_size 300
_em_sample_support.grid_type 'Quantifoil R2/2'
_em_sample_support.method ?
_em_sample_support.film_material ?
#
_em_vitrification.id 1
_em_vitrification.specimen_id 1
_em_vitrification.chamber_temperature ?
_em_vitrification.cryogen_name ETHANE
_em_vitrification.details ?
_em_vitrification.humidity ?
_em_vitrification.instrument 'FEI VITROBOT MARK IV'
_em_vitrification.entry_id 6CF4
_em_vitrification.citation_id ?
_em_vitrification.method ?
_em_vitrification.temp ?
_em_vitrification.time_resolved_state ?
#
_em_experiment.entry_id 6CF4
_em_experiment.id 1
_em_experiment.aggregation_state '3D ARRAY'
_em_experiment.reconstruction_method CRYSTALLOGRAPHY
_em_experiment.entity_assembly_id 1
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
ASN N N N N 1
ASN CA C N S 2
ASN C C N N 3
ASN O O N N 4
ASN CB C N N 5
ASN CG C N N 6
ASN OD1 O N N 7
ASN ND2 N N N 8
ASN OXT O N N 9
ASN H H N N 10
ASN H2 H N N 11
ASN HA H N N 12
ASN HB2 H N N 13
ASN HB3 H N N 14
ASN HD21 H N N 15
ASN HD22 H N N 16
ASN HXT H N N 17
GLY N N N N 18
GLY CA C N N 19
GLY C C N N 20
GLY O O N N 21
GLY OXT O N N 22
GLY H H N N 23
GLY H2 H N N 24
GLY HA2 H N N 25
GLY HA3 H N N 26
GLY HXT H N N 27
HOH O O N N 28
HOH H1 H N N 29
HOH H2 H N N 30
PHE N N N N 31
PHE CA C N S 32
PHE C C N N 33
PHE O O N N 34
PHE CB C N N 35
PHE CG C Y N 36
PHE CD1 C Y N 37
PHE CD2 C Y N 38
PHE CE1 C Y N 39
PHE CE2 C Y N 40
PHE CZ C Y N 41
PHE OXT O N N 42
PHE H H N N 43
PHE H2 H N N 44
PHE HA H N N 45
PHE HB2 H N N 46
PHE HB3 H N N 47
PHE HD1 H N N 48
PHE HD2 H N N 49
PHE HE1 H N N 50
PHE HE2 H N N 51
PHE HZ H N N 52
PHE HXT H N N 53
SER N N N N 54
SER CA C N S 55
SER C C N N 56
SER O O N N 57
SER CB C N N 58
SER OG O N N 59
SER OXT O N N 60
SER H H N N 61
SER H2 H N N 62
SER HA H N N 63
SER HB2 H N N 64
SER HB3 H N N 65
SER HG H N N 66
SER HXT H N N 67
TPO N N N N 68
TPO CA C N S 69
TPO CB C N R 70
TPO CG2 C N N 71
TPO OG1 O N N 72
TPO P P N N 73
TPO O1P O N N 74
TPO O2P O N N 75
TPO O3P O N N 76
TPO C C N N 77
TPO O O N N 78
TPO OXT O N N 79
TPO H H N N 80
TPO H2 H N N 81
TPO HA H N N 82
TPO HB H N N 83
TPO HG21 H N N 84
TPO HG22 H N N 85
TPO HG23 H N N 86
TPO HOP2 H N N 87
TPO HOP3 H N N 88
TPO HXT H N N 89
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ASN N CA sing N N 1
ASN N H sing N N 2
ASN N H2 sing N N 3
ASN CA C sing N N 4
ASN CA CB sing N N 5
ASN CA HA sing N N 6
ASN C O doub N N 7
ASN C OXT sing N N 8
ASN CB CG sing N N 9
ASN CB HB2 sing N N 10
ASN CB HB3 sing N N 11
ASN CG OD1 doub N N 12
ASN CG ND2 sing N N 13
ASN ND2 HD21 sing N N 14
ASN ND2 HD22 sing N N 15
ASN OXT HXT sing N N 16
GLY N CA sing N N 17
GLY N H sing N N 18
GLY N H2 sing N N 19
GLY CA C sing N N 20
GLY CA HA2 sing N N 21
GLY CA HA3 sing N N 22
GLY C O doub N N 23
GLY C OXT sing N N 24
GLY OXT HXT sing N N 25
HOH O H1 sing N N 26
HOH O H2 sing N N 27
PHE N CA sing N N 28
PHE N H sing N N 29
PHE N H2 sing N N 30
PHE CA C sing N N 31
PHE CA CB sing N N 32
PHE CA HA sing N N 33
PHE C O doub N N 34
PHE C OXT sing N N 35
PHE CB CG sing N N 36
PHE CB HB2 sing N N 37
PHE CB HB3 sing N N 38
PHE CG CD1 doub Y N 39
PHE CG CD2 sing Y N 40
PHE CD1 CE1 sing Y N 41
PHE CD1 HD1 sing N N 42
PHE CD2 CE2 doub Y N 43
PHE CD2 HD2 sing N N 44
PHE CE1 CZ doub Y N 45
PHE CE1 HE1 sing N N 46
PHE CE2 CZ sing Y N 47
PHE CE2 HE2 sing N N 48
PHE CZ HZ sing N N 49
PHE OXT HXT sing N N 50
SER N CA sing N N 51
SER N H sing N N 52
SER N H2 sing N N 53
SER CA C sing N N 54
SER CA CB sing N N 55
SER CA HA sing N N 56
SER C O doub N N 57
SER C OXT sing N N 58
SER CB OG sing N N 59
SER CB HB2 sing N N 60
SER CB HB3 sing N N 61
SER OG HG sing N N 62
SER OXT HXT sing N N 63
TPO N CA sing N N 64
TPO N H sing N N 65
TPO N H2 sing N N 66
TPO CA CB sing N N 67
TPO CA C sing N N 68
TPO CA HA sing N N 69
TPO CB CG2 sing N N 70
TPO CB OG1 sing N N 71
TPO CB HB sing N N 72
TPO CG2 HG21 sing N N 73
TPO CG2 HG22 sing N N 74
TPO CG2 HG23 sing N N 75
TPO OG1 P sing N N 76
TPO P O1P doub N N 77
TPO P O2P sing N N 78
TPO P O3P sing N N 79
TPO O2P HOP2 sing N N 80
TPO O3P HOP3 sing N N 81
TPO C O doub N N 82
TPO C OXT sing N N 83
TPO OXT HXT sing N N 84
#
_em_3d_crystal_entity.id 1
_em_3d_crystal_entity.image_processing_id 1
_em_3d_crystal_entity.angle_alpha 90.00
_em_3d_crystal_entity.angle_beta 90.00
_em_3d_crystal_entity.angle_gamma 90.00
_em_3d_crystal_entity.length_a 23.650
_em_3d_crystal_entity.length_b 4.720
_em_3d_crystal_entity.length_c 30.060
_em_3d_crystal_entity.space_group_name 'P 21 21 21'
_em_3d_crystal_entity.space_group_num 19
#
_em_admin.entry_id 6CF4
_em_admin.current_status REL
_em_admin.deposition_date 2018-02-13
_em_admin.deposition_site RCSB
_em_admin.last_update 2024-11-06
_em_admin.map_release_date 2018-05-23
_em_admin.title
;Segment NFGTFS, with familial mutation A315T and phosphorylated threonine, from the low complexity domain of TDP-43, residues 312-317
;
#
_em_crystal_formation.id 1
_em_crystal_formation.specimen_id 1
_em_crystal_formation.atmosphere 'air, sealed chamber'
_em_crystal_formation.details
'Crystals were prepared by shaking peptide in microcentrifuge tube at 37 deg Celsius for 4 days.'
_em_crystal_formation.instrument 'microcentrifuge tube'
_em_crystal_formation.lipid_mixture none
_em_crystal_formation.lipid_protein_ratio ?
_em_crystal_formation.temperature 310
_em_crystal_formation.time 4
_em_crystal_formation.time_unit DAY
#
_em_ctf_correction.id 1
_em_ctf_correction.em_image_processing_id 1
_em_ctf_correction.type NONE
_em_ctf_correction.details ?
#
_em_diffraction.id 1
_em_diffraction.camera_length 819
_em_diffraction.imaging_id 1
_em_diffraction.tilt_angle_list ?
#
loop_
_em_diffraction_shell.id
_em_diffraction_shell.em_diffraction_stats_id
_em_diffraction_shell.fourier_space_coverage
_em_diffraction_shell.high_resolution
_em_diffraction_shell.low_resolution
_em_diffraction_shell.multiplicity
_em_diffraction_shell.num_structure_factors
_em_diffraction_shell.phase_residual
1 1 85 7.65 1.08 3.6 1300 20.96
2 1 88 1.08 0.86 3.9 1241 37.03
3 1 88 0.86 0.75 3.9 1209 39.38
#
_em_diffraction_stats.id 1
_em_diffraction_stats.details ?
_em_diffraction_stats.image_processing_id 1
_em_diffraction_stats.fourier_space_coverage 86.6
_em_diffraction_stats.high_resolution 0.75
_em_diffraction_stats.num_intensities_measured 15891
_em_diffraction_stats.num_structure_factors 4177
_em_diffraction_stats.overall_phase_error 32.2
_em_diffraction_stats.overall_phase_residual 32.2
_em_diffraction_stats.phase_error_rejection_criteria 0
_em_diffraction_stats.r_merge 17.2
_em_diffraction_stats.r_sym 17.2
#
_em_entity_assembly_molwt.entity_assembly_id 1
_em_entity_assembly_molwt.id 1
_em_entity_assembly_molwt.experimental_flag NO
_em_entity_assembly_molwt.units ?
_em_entity_assembly_molwt.value ?
#
_em_entity_assembly_naturalsource.id 2
_em_entity_assembly_naturalsource.entity_assembly_id 1
_em_entity_assembly_naturalsource.cell ?
_em_entity_assembly_naturalsource.cellular_location ?
_em_entity_assembly_naturalsource.ncbi_tax_id 9606
_em_entity_assembly_naturalsource.organ ?
_em_entity_assembly_naturalsource.organelle ?
_em_entity_assembly_naturalsource.organism 'Homo sapiens'
_em_entity_assembly_naturalsource.strain ?
_em_entity_assembly_naturalsource.tissue ?
#
_em_image_processing.id 1
_em_image_processing.image_recording_id 1
_em_image_processing.details ?
#
_em_image_recording.id 1
_em_image_recording.imaging_id 1
_em_image_recording.avg_electron_dose_per_image 0.01
_em_image_recording.average_exposure_time 3
_em_image_recording.details 'The detector was operated in rolling shutter mode with 2X2 pixel binning.'
_em_image_recording.detector_mode ?
_em_image_recording.film_or_detector_model 'TVIPS TEMCAM-F416 (4k x 4k)'
_em_image_recording.num_diffraction_images 100
_em_image_recording.num_grids_imaged 1
_em_image_recording.num_real_images ?
#
loop_
_em_software.id
_em_software.category
_em_software.details
_em_software.name
_em_software.version
_em_software.image_processing_id
_em_software.fitting_id
_em_software.imaging_id
1 'IMAGE ACQUISITION' ? EM-Menu ? ? ? 1
2 MASKING ? ? ? ? ? ?
3 'CTF CORRECTION' ? ? ? 1 ? ?
4 'LAYERLINE INDEXING' ? ? ? ? ? ?
5 'DIFFRACTION INDEXING' ? ? ? ? ? ?
6 'MODEL FITTING' ? Coot ? ? 1 ?
7 OTHER ? ? ? ? ? ?
8 'MOLECULAR REPLACEMENT' ? ? ? 1 ? ?
9 'LATTICE DISTORTION CORRECTION' ? ? ? 1 ? ?
10 'SYMMETRY DETERMINATION' ? ? ? 1 ? ?
11 'CRYSTALLOGRAPHY MERGING' ? ? ? 1 ? ?
12 RECONSTRUCTION 'direct methods' SHELXD 2013/2 1 ? ?
13 'MODEL REFINEMENT' ? PHENIX ? ? 1 ?
#
_em_specimen.id 1
_em_specimen.experiment_id 1
_em_specimen.concentration ?
_em_specimen.details ?
_em_specimen.embedding_applied NO
_em_specimen.shadowing_applied NO
_em_specimen.staining_applied NO
_em_specimen.vitrification_applied YES
#
_pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute on Aging (NIH/NIA)'
_pdbx_audit_support.country 'United States'
_pdbx_audit_support.grant_number AG029430
_pdbx_audit_support.ordinal 1
#
_atom_sites.entry_id 6CF4
_atom_sites.fract_transf_matrix[1][1] 0.042283
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.211864
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.033267
_atom_sites.fract_transf_vector[1] 0.000000
_atom_sites.fract_transf_vector[2] 0.000000
_atom_sites.fract_transf_vector[3] 0.000000
#
loop_
_atom_type.symbol
C
H
N
O
P
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 N N . ASN A 1 1 ? 12.845 2.557 3.438 1.00 4.43 ? 312 ASN A N 1
ATOM 2 C CA . ASN A 1 1 ? 11.573 1.795 3.262 1.00 2.56 ? 312 ASN A CA 1
ATOM 3 C C . ASN A 1 1 ? 10.471 2.711 2.786 1.00 2.97 ? 312 ASN A C 1
ATOM 4 O O . ASN A 1 1 ? 10.742 3.827 2.365 1.00 2.25 ? 312 ASN A O 1
ATOM 5 C CB . ASN A 1 1 ? 11.171 1.016 4.536 1.00 3.07 ? 312 ASN A CB 1
ATOM 6 C CG . ASN A 1 1 ? 10.780 1.898 5.708 1.00 2.97 ? 312 ASN A CG 1
ATOM 7 O OD1 . ASN A 1 1 ? 10.751 3.120 5.632 1.00 2.97 ? 312 ASN A OD1 1
ATOM 8 N ND2 . ASN A 1 1 ? 10.454 1.252 6.803 1.00 3.48 ? 312 ASN A ND2 1
ATOM 9 H H1 . ASN A 1 1 ? 13.468 2.222 2.898 0.51 52.60 ? 312 ASN A H1 1
ATOM 10 H H2 . ASN A 1 1 ? 12.709 3.413 3.238 1.00 13.53 ? 312 ASN A H2 1
ATOM 11 H H3 . ASN A 1 1 ? 13.117 2.488 4.283 0.12 170.86 ? 312 ASN A H3 1
ATOM 12 H HA . ASN A 1 1 ? 11.719 1.147 2.559 0.83 1.52 ? 312 ASN A HA 1
ATOM 13 H HB2 . ASN A 1 1 ? 10.412 0.444 4.331 1.00 3.68 ? 312 ASN A HB2 1
ATOM 14 H HB3 . ASN A 1 1 ? 11.922 0.471 4.818 0.78 3.22 ? 312 ASN A HB3 1
ATOM 15 H HD22 . ASN A 1 1 ? 10.487 0.392 6.812 1.00 10.51 ? 312 ASN A HD22 1
ATOM 16 N N . PHE A 1 2 ? 9.235 2.218 2.782 1.00 3.44 ? 313 PHE A N 1
ATOM 17 C CA . PHE A 1 2 ? 8.123 3.117 2.535 1.00 3.12 ? 313 PHE A CA 1
ATOM 18 C C . PHE A 1 2 ? 7.734 3.805 3.829 1.00 2.62 ? 313 PHE A C 1
ATOM 19 O O . PHE A 1 2 ? 7.795 5.029 3.928 1.00 3.19 ? 313 PHE A O 1
ATOM 20 C CB . PHE A 1 2 ? 6.938 2.400 1.895 1.00 3.47 ? 313 PHE A CB 1
ATOM 21 C CG . PHE A 1 2 ? 5.906 3.340 1.374 1.00 4.70 ? 313 PHE A CG 1
ATOM 22 C CD1 . PHE A 1 2 ? 6.003 3.836 0.096 1.00 5.86 ? 313 PHE A CD1 1
ATOM 23 C CD2 . PHE A 1 2 ? 4.862 3.768 2.174 1.00 7.22 ? 313 PHE A CD2 1
ATOM 24 C CE1 . PHE A 1 2 ? 5.064 4.721 -0.392 1.00 6.40 ? 313 PHE A CE1 1
ATOM 25 C CE2 . PHE A 1 2 ? 3.922 4.658 1.692 1.00 8.18 ? 313 PHE A CE2 1
ATOM 26 C CZ . PHE A 1 2 ? 4.026 5.133 0.402 1.00 7.02 ? 313 PHE A CZ 1
ATOM 27 H H . PHE A 1 2 ? 9.021 1.395 2.916 1.00 4.95 ? 313 PHE A H 1
ATOM 28 H HA . PHE A 1 2 ? 8.407 3.807 1.918 0.76 2.02 ? 313 PHE A HA 1
ATOM 29 H HB3 . PHE A 1 2 ? 6.518 1.829 2.556 0.89 1.86 ? 313 PHE A HB3 1
ATOM 30 H HD1 . PHE A 1 2 ? 6.704 3.563 -0.451 0.56 7.21 ? 313 PHE A HD1 1
ATOM 31 H HD2 . PHE A 1 2 ? 4.789 3.449 3.044 1.00 105.75 ? 313 PHE A HD2 1
ATOM 32 H HE1 . PHE A 1 2 ? 5.137 5.042 -1.262 1.00 42.48 ? 313 PHE A HE1 1
ATOM 33 H HE2 . PHE A 1 2 ? 3.218 4.931 2.236 0.00 85.96 ? 313 PHE A HE2 1
ATOM 34 H HZ . PHE A 1 2 ? 3.394 5.731 0.070 0.73 12.47 ? 313 PHE A HZ 1
ATOM 35 N N . GLY A 1 3 ? 7.408 3.044 4.851 1.00 2.45 ? 314 GLY A N 1
ATOM 36 C CA . GLY A 1 3 ? 7.275 3.664 6.133 1.00 3.11 ? 314 GLY A CA 1
ATOM 37 C C . GLY A 1 3 ? 6.419 2.877 7.061 1.00 2.26 ? 314 GLY A C 1
ATOM 38 O O . GLY A 1 3 ? 6.297 1.666 6.961 1.00 2.67 ? 314 GLY A O 1
ATOM 39 H HA2 . GLY A 1 3 ? 8.154 3.764 6.529 0.89 5.70 ? 314 GLY A HA2 1
ATOM 40 H HA3 . GLY A 1 3 ? 6.883 4.536 6.020 1.00 120.76 ? 314 GLY A HA3 1
HETATM 41 N N . TPO A 1 4 ? 5.803 3.594 7.975 1.00 2.39 ? 315 TPO A N 1
HETATM 42 C CA . TPO A 1 4 ? 5.181 2.973 9.103 1.00 2.13 ? 315 TPO A CA 1
HETATM 43 C CB . TPO A 1 4 ? 6.131 3.012 10.292 1.00 2.35 ? 315 TPO A CB 1
HETATM 44 C CG2 . TPO A 1 4 ? 5.481 2.535 11.587 1.00 3.60 ? 315 TPO A CG2 1
HETATM 45 O OG1 . TPO A 1 4 ? 7.150 2.084 9.950 1.00 2.68 ? 315 TPO A OG1 1
HETATM 46 P P . TPO A 1 4 ? 8.647 2.648 10.020 1.00 2.79 ? 315 TPO A P 1
HETATM 47 O O1P . TPO A 1 4 ? 9.596 1.446 9.603 1.00 3.38 ? 315 TPO A O1P 1
HETATM 48 O O2P . TPO A 1 4 ? 8.821 3.730 9.007 1.00 3.46 ? 315 TPO A O2P 1
HETATM 49 O O3P . TPO A 1 4 ? 9.014 3.185 11.454 1.00 2.79 ? 315 TPO A O3P 1
HETATM 50 C C . TPO A 1 4 ? 3.883 3.676 9.408 1.00 2.52 ? 315 TPO A C 1
HETATM 51 O O . TPO A 1 4 ? 3.812 4.888 9.465 1.00 2.17 ? 315 TPO A O 1
HETATM 52 H H . TPO A 1 4 ? 5.683 4.684 7.900 1.00 17.81 ? 315 TPO A H 1
HETATM 53 H HA . TPO A 1 4 ? 4.981 2.041 8.884 0.90 0.08 ? 315 TPO A HA 1
HETATM 54 H HG21 . TPO A 1 4 ? 5.733 3.232 12.385 1.00 25.49 ? 315 TPO A HG21 1
HETATM 55 H HG22 . TPO A 1 4 ? 5.879 1.552 11.836 0.87 16.05 ? 315 TPO A HG22 1
HETATM 56 H HG23 . TPO A 1 4 ? 4.399 2.465 11.507 0.82 7.61 ? 315 TPO A HG23 1
HETATM 57 H HOP2 . TPO A 1 4 ? 9.043 4.774 9.355 1.00 1.84 ? 315 TPO A HOP2 1
ATOM 58 N N . PHE A 1 5 ? 2.846 2.878 9.583 1.00 3.18 ? 316 PHE A N 1
ATOM 59 C CA . PHE A 1 5 ? 1.565 3.379 10.020 1.00 3.55 ? 316 PHE A CA 1
ATOM 60 C C . PHE A 1 5 ? 1.308 2.781 11.382 1.00 3.16 ? 316 PHE A C 1
ATOM 61 O O . PHE A 1 5 ? 1.321 1.571 11.547 1.00 3.31 ? 316 PHE A O 1
ATOM 62 C CB . PHE A 1 5 ? 0.502 2.911 9.038 1.00 5.05 ? 316 PHE A CB 1
ATOM 63 C CG . PHE A 1 5 ? -0.878 3.415 9.328 1.00 7.31 ? 316 PHE A CG 1
ATOM 64 C CD1 . PHE A 1 5 ? -1.110 4.440 10.222 1.00 8.89 ? 316 PHE A CD1 1
ATOM 65 C CD2 . PHE A 1 5 ? -1.959 2.847 8.679 1.00 9.55 ? 316 PHE A CD2 1
ATOM 66 C CE1 . PHE A 1 5 ? -2.397 4.877 10.464 1.00 10.84 ? 316 PHE A CE1 1
ATOM 67 C CE2 . PHE A 1 5 ? -3.241 3.281 8.912 1.00 10.86 ? 316 PHE A CE2 1
ATOM 68 C CZ . PHE A 1 5 ? -3.464 4.291 9.811 1.00 9.09 ? 316 PHE A CZ 1
ATOM 69 H H . PHE A 1 5 ? 2.864 2.027 9.454 1.00 13.00 ? 316 PHE A H 1
ATOM 70 H HA . PHE A 1 5 ? 1.569 4.348 10.079 1.00 4.01 ? 316 PHE A HA 1
ATOM 71 H HB3 . PHE A 1 5 ? 0.472 1.939 9.043 1.00 3.45 ? 316 PHE A HB3 1
ATOM 72 H HD1 . PHE A 1 5 ? -0.399 4.836 10.672 1.00 153.69 ? 316 PHE A HD1 1
ATOM 73 H HD2 . PHE A 1 5 ? -1.815 2.158 8.073 0.92 58.96 ? 316 PHE A HD2 1
ATOM 74 H HE1 . PHE A 1 5 ? -2.546 5.565 11.071 0.00 85.49 ? 316 PHE A HE1 1
ATOM 75 H HE2 . PHE A 1 5 ? -3.956 2.884 8.469 1.00 43.71 ? 316 PHE A HE2 1
ATOM 76 H HZ . PHE A 1 5 ? -4.329 4.590 9.971 0.00 7.08 ? 316 PHE A HZ 1
ATOM 77 N N . SER A 1 6 ? 1.076 3.619 12.366 1.00 4.36 ? 317 SER A N 1
ATOM 78 C CA . SER A 1 6 ? 0.815 3.144 13.704 1.00 5.97 ? 317 SER A CA 1
ATOM 79 C C . SER A 1 6 ? -0.344 3.944 14.255 1.00 6.06 ? 317 SER A C 1
ATOM 80 O O . SER A 1 6 ? -0.818 4.888 13.654 1.00 5.98 ? 317 SER A O 1
ATOM 81 C CB . SER A 1 6 ? 2.093 3.289 14.574 1.00 8.74 ? 317 SER A CB 1
ATOM 82 O OG . SER A 1 6 ? 2.292 4.575 14.897 1.00 9.51 ? 317 SER A OG 1
ATOM 83 O OXT . SER A 1 6 ? -0.738 3.695 15.404 1.00 5.61 ? 317 SER A OXT 1
ATOM 84 H H . SER A 1 6 ? 1.064 4.475 12.285 0.00 80.72 ? 317 SER A H 1
ATOM 85 H HA . SER A 1 6 ? 0.559 2.198 13.676 0.91 7.32 ? 317 SER A HA 1
ATOM 86 H HB2 . SER A 1 6 ? 1.986 2.770 15.386 0.00 61.56 ? 317 SER A HB2 1
ATOM 87 H HB3 . SER A 1 6 ? 2.857 2.967 14.071 1.00 13.83 ? 317 SER A HB3 1
ATOM 88 H HG . SER A 1 6 ? 1.656 4.856 15.333 0.29 12.54 ? 317 SER A HG 1
HETATM 89 O O . HOH B 2 . ? 9.493 1.845 13.535 1.00 3.07 ? 401 HOH A O 1
#
loop_
_atom_site_anisotrop.id
_atom_site_anisotrop.type_symbol
_atom_site_anisotrop.pdbx_label_atom_id
_atom_site_anisotrop.pdbx_label_alt_id
_atom_site_anisotrop.pdbx_label_comp_id
_atom_site_anisotrop.pdbx_label_asym_id
_atom_site_anisotrop.pdbx_label_seq_id
_atom_site_anisotrop.pdbx_PDB_ins_code
_atom_site_anisotrop.U[1][1]
_atom_site_anisotrop.U[2][2]
_atom_site_anisotrop.U[3][3]
_atom_site_anisotrop.U[1][2]
_atom_site_anisotrop.U[1][3]
_atom_site_anisotrop.U[2][3]
_atom_site_anisotrop.pdbx_auth_seq_id
_atom_site_anisotrop.pdbx_auth_comp_id
_atom_site_anisotrop.pdbx_auth_asym_id
_atom_site_anisotrop.pdbx_auth_atom_id
1 N N . ASN A 1 ? 0.0676 0.0422 0.0583 -0.0063 0.0282 -0.0143 312 ASN A N
2 C CA . ASN A 1 ? 0.0515 0.0180 0.0278 0.0043 0.0114 0.0006 312 ASN A CA
3 C C . ASN A 1 ? 0.0558 0.0399 0.0171 0.0015 0.0047 -0.0013 312 ASN A C
4 O O . ASN A 1 ? 0.0519 0.0173 0.0162 -0.0006 0.0030 -0.0011 312 ASN A O
5 C CB . ASN A 1 ? 0.0462 0.0436 0.0267 -0.0031 0.0056 -0.0012 312 ASN A CB
6 C CG . ASN A 1 ? 0.0601 0.0274 0.0253 -0.0077 0.0032 0.0072 312 ASN A CG
7 O OD1 . ASN A 1 ? 0.0617 0.0208 0.0302 0.0007 -0.0004 -0.0062 312 ASN A OD1
8 N ND2 . ASN A 1 ? 0.0589 0.0364 0.0369 -0.0077 0.0055 0.0027 312 ASN A ND2
16 N N . PHE A 2 ? 0.0588 0.0473 0.0246 0.0010 0.0023 -0.0037 313 PHE A N
17 C CA . PHE A 2 ? 0.0617 0.0284 0.0286 -0.0041 0.0055 -0.0057 313 PHE A CA
18 C C . PHE A 2 ? 0.0587 0.0189 0.0221 0.0056 0.0023 -0.0018 313 PHE A C
19 O O . PHE A 2 ? 0.0734 0.0248 0.0232 -0.0109 0.0010 -0.0018 313 PHE A O
20 C CB . PHE A 2 ? 0.0604 0.0200 0.0513 0.0010 0.0033 0.0088 313 PHE A CB
21 C CG . PHE A 2 ? 0.0788 0.0377 0.0622 0.0046 -0.0019 0.0245 313 PHE A CG
22 C CD1 . PHE A 2 ? 0.0864 0.0631 0.0733 0.0124 -0.0122 0.0346 313 PHE A CD1
23 C CD2 . PHE A 2 ? 0.0995 0.0761 0.0988 0.0107 -0.0110 0.0453 313 PHE A CD2
24 C CE1 . PHE A 2 ? 0.0949 0.0600 0.0883 -0.0029 -0.0097 0.0393 313 PHE A CE1
25 C CE2 . PHE A 2 ? 0.1066 0.0931 0.1112 0.0198 -0.0094 0.0339 313 PHE A CE2
26 C CZ . PHE A 2 ? 0.1000 0.0629 0.1037 0.0041 -0.0145 0.0411 313 PHE A CZ
35 N N . GLY A 3 ? 0.0493 0.0162 0.0277 0.0033 0.0057 -0.0027 314 GLY A N
36 C CA . GLY A 3 ? 0.0601 0.0214 0.0365 -0.0062 0.0064 0.0059 314 GLY A CA
37 C C . GLY A 3 ? 0.0532 0.0162 0.0166 -0.0036 0.0042 -0.0003 314 GLY A C
38 O O . GLY A 3 ? 0.0542 0.0268 0.0206 0.0174 0.0072 0.0034 314 GLY A O
41 N N . TPO A 4 ? 0.0490 0.0265 0.0152 -0.0031 0.0022 -0.0021 315 TPO A N
42 C CA . TPO A 4 ? 0.0461 0.0202 0.0146 0.0090 -0.0007 0.0003 315 TPO A CA
43 C CB . TPO A 4 ? 0.0421 0.0266 0.0206 0.0054 -0.0055 0.0076 315 TPO A CB
44 C CG2 . TPO A 4 ? 0.0581 0.0321 0.0464 0.0177 -0.0069 0.0080 315 TPO A CG2
45 O OG1 . TPO A 4 ? 0.0539 0.0302 0.0178 0.0032 -0.0053 -0.0041 315 TPO A OG1
46 P P . TPO A 4 ? 0.0578 0.0304 0.0178 0.0007 0.0014 0.0036 315 TPO A P
47 O O1P . TPO A 4 ? 0.0644 0.0450 0.0192 -0.0050 -0.0031 0.0025 315 TPO A O1P
48 O O2P . TPO A 4 ? 0.0752 0.0341 0.0222 -0.0068 0.0034 0.0022 315 TPO A O2P
49 O O3P . TPO A 4 ? 0.0588 0.0287 0.0185 0.0060 0.0063 0.0009 315 TPO A O3P
50 C C . TPO A 4 ? 0.0501 0.0264 0.0194 0.0006 -0.0037 0.0068 315 TPO A C
51 O O . TPO A 4 ? 0.0440 0.0141 0.0243 0.0035 -0.0009 0.0017 315 TPO A O
58 N N . PHE A 5 ? 0.0522 0.0353 0.0333 -0.0195 -0.0122 0.0123 316 PHE A N
59 C CA . PHE A 5 ? 0.0672 0.0254 0.0424 -0.0086 -0.0053 0.0010 316 PHE A CA
60 C C . PHE A 5 ? 0.0690 0.0220 0.0289 -0.0087 0.0053 -0.0024 316 PHE A C
61 O O . PHE A 5 ? 0.0632 0.0379 0.0247 0.0028 0.0105 -0.0074 316 PHE A O
62 C CB . PHE A 5 ? 0.0706 0.0640 0.0573 0.0038 -0.0084 -0.0286 316 PHE A CB
63 C CG . PHE A 5 ? 0.1020 0.0834 0.0924 0.0154 -0.0100 -0.0489 316 PHE A CG
64 C CD1 . PHE A 5 ? 0.1207 0.0971 0.1199 0.0321 -0.0156 -0.0556 316 PHE A CD1
65 C CD2 . PHE A 5 ? 0.1231 0.1210 0.1188 0.0072 -0.0099 -0.0695 316 PHE A CD2
66 C CE1 . PHE A 5 ? 0.1259 0.1577 0.1281 0.0356 -0.0193 -0.0685 316 PHE A CE1
67 C CE2 . PHE A 5 ? 0.1359 0.1423 0.1346 0.0173 -0.0160 -0.0798 316 PHE A CE2
68 C CZ . PHE A 5 ? 0.1183 0.1065 0.1206 0.0299 -0.0147 -0.0611 316 PHE A CZ
77 N N . SER A 6 ? 0.0851 0.0257 0.0547 -0.0089 0.0086 -0.0012 317 SER A N
78 C CA . SER A 6 ? 0.0984 0.0641 0.0645 -0.0149 0.0061 0.0004 317 SER A CA
79 C C . SER A 6 ? 0.1062 0.0875 0.0365 -0.0048 -0.0035 -0.0003 317 SER A C
80 O O . SER A 6 ? 0.1154 0.0747 0.0372 0.0131 -0.0039 -0.0009 317 SER A O
81 C CB . SER A 6 ? 0.1173 0.1125 0.1023 0.0043 0.0070 -0.0104 317 SER A CB
82 O OG . SER A 6 ? 0.1267 0.1213 0.1132 0.0018 -0.0002 -0.0276 317 SER A OG
83 O OXT . SER A 6 ? 0.0968 0.0869 0.0296 -0.0108 -0.0075 -0.0043 317 SER A OXT
89 O O . HOH B . ? 0.0503 0.0447 0.0218 0.0068 0.0059 -0.0102 401 HOH A O
#