data_6C3G
#
_entry.id 6C3G
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.387
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 6C3G pdb_00006c3g 10.2210/pdb6c3g/pdb
WWPDB D_1000232002 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2018-04-18
2 'Structure model' 1 1 2018-07-18
3 'Structure model' 1 2 2018-08-01
4 'Structure model' 1 3 2024-03-13
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Data collection'
2 2 'Structure model' 'Database references'
3 3 'Structure model' 'Data collection'
4 3 'Structure model' 'Database references'
5 4 'Structure model' 'Data collection'
6 4 'Structure model' 'Database references'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 2 'Structure model' citation
2 3 'Structure model' citation
3 3 'Structure model' citation_author
4 3 'Structure model' pdbx_related_exp_data_set
5 4 'Structure model' chem_comp_atom
6 4 'Structure model' chem_comp_bond
7 4 'Structure model' database_2
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 2 'Structure model' '_citation.journal_volume'
2 2 'Structure model' '_citation.page_first'
3 2 'Structure model' '_citation.page_last'
4 2 'Structure model' '_citation.title'
5 4 'Structure model' '_database_2.pdbx_DOI'
6 4 'Structure model' '_database_2.pdbx_database_accession'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.entry_id 6C3G
_pdbx_database_status.recvd_initial_deposition_date 2018-01-09
_pdbx_database_status.SG_entry N
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_nmr_data ?
#
_pdbx_database_related.db_name PDB
_pdbx_database_related.details .
_pdbx_database_related.db_id 6C3F
_pdbx_database_related.content_type unspecified
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
_audit_author.identifier_ORCID
'Saelices, L.' 1 0000-0002-1904-2150
'Sawaya, M.R.' 2 0000-0003-0874-9043
'Eisenberg, D.S.' 3 0000-0003-2432-5419
#
loop_
_citation.abstract
_citation.abstract_id_CAS
_citation.book_id_ISBN
_citation.book_publisher
_citation.book_publisher_city
_citation.book_title
_citation.coordinate_linkage
_citation.country
_citation.database_id_Medline
_citation.details
_citation.id
_citation.journal_abbrev
_citation.journal_id_ASTM
_citation.journal_id_CSD
_citation.journal_id_ISSN
_citation.journal_full
_citation.journal_issue
_citation.journal_volume
_citation.language
_citation.page_first
_citation.page_last
_citation.title
_citation.year
_citation.database_id_CSD
_citation.pdbx_database_id_DOI
_citation.pdbx_database_id_PubMed
_citation.unpublished_flag
? ? ? ? ? ? ? US ? ? primary 'Protein Sci.' PRCIEI 0795 1469-896X ? ? 27 ? 1295 1303
'Crystal structures of amyloidogenic segments of human transthyretin.' 2018 ? 10.1002/pro.3420 29626847 ?
? ? ? ? ? ? ? US ? ? 1 'J. Biol. Chem.' JBCHA3 0071 1083-351X ? ? 290 ? 28932 28943
'Uncovering the Mechanism of Aggregation of Human Transthyretin.' 2015 ? 10.1074/jbc.M115.659912 26459562 ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Saelices, L.' 1 ?
primary 'Sievers, S.A.' 2 ?
primary 'Sawaya, M.R.' 3 ?
primary 'Eisenberg, D.S.' 4 ?
1 'Saelices, L.' 5 ?
1 'Johnson, L.M.' 6 ?
1 'Liang, W.Y.' 7 ?
1 'Sawaya, M.R.' 8 ?
1 'Cascio, D.' 9 ?
1 'Ruchala, P.' 10 ?
1 'Whitelegge, J.' 11 ?
1 'Jiang, L.' 12 ?
1 'Riek, R.' 13 ?
1 'Eisenberg, D.S.' 14 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn LYS-ALA-LEU-GLY-ILE-SER 588.718 2 ? ? ? ?
2 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ?
3 non-polymer syn GLYCEROL 92.094 1 ? ? ? ?
4 water nat water 18.015 2 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code KALGIS
_entity_poly.pdbx_seq_one_letter_code_can KALGIS
_entity_poly.pdbx_strand_id A,B
_entity_poly.pdbx_target_identifier ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2 'SULFATE ION' SO4
3 GLYCEROL GOL
4 water HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 LYS n
1 2 ALA n
1 3 LEU n
1 4 GLY n
1 5 ILE n
1 6 SER n
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num 1
_pdbx_entity_src_syn.pdbx_end_seq_num 6
_pdbx_entity_src_syn.organism_scientific 'Homo sapiens'
_pdbx_entity_src_syn.organism_common_name ?
_pdbx_entity_src_syn.ncbi_taxonomy_id 9606
_pdbx_entity_src_syn.details ?
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067
GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094
HOH non-polymer . WATER ? 'H2 O' 18.015
ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173
LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173
LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195
SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093
SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 LYS 1 1 1 LYS LYS A . n
A 1 2 ALA 2 2 2 ALA ALA A . n
A 1 3 LEU 3 3 3 LEU LEU A . n
A 1 4 GLY 4 4 4 GLY GLY A . n
A 1 5 ILE 5 5 5 ILE ILE A . n
A 1 6 SER 6 6 6 SER SER A . n
B 1 1 LYS 1 1 1 LYS LYS B . n
B 1 2 ALA 2 2 2 ALA ALA B . n
B 1 3 LEU 3 3 3 LEU LEU B . n
B 1 4 GLY 4 4 4 GLY GLY B . n
B 1 5 ILE 5 5 5 ILE ILE B . n
B 1 6 SER 6 6 6 SER SER B . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SO4 1 101 1 SO4 SO4 A .
D 3 GOL 1 101 1 GOL GOL B .
E 4 HOH 1 201 2 HOH HOH A .
E 4 HOH 2 202 1 HOH HOH A .
#
loop_
_software.citation_id
_software.classification
_software.compiler_name
_software.compiler_version
_software.contact_author
_software.contact_author_email
_software.date
_software.description
_software.dependencies
_software.hardware
_software.language
_software.location
_software.mods
_software.name
_software.os
_software.os_version
_software.type
_software.version
_software.pdbx_ordinal
? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 1
? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.8.1_1168 2
? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.24 3
? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4
? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5
#
_cell.angle_alpha 96.940
_cell.angle_alpha_esd ?
_cell.angle_beta 96.350
_cell.angle_beta_esd ?
_cell.angle_gamma 110.050
_cell.angle_gamma_esd ?
_cell.entry_id 6C3G
_cell.details ?
_cell.formula_units_Z ?
_cell.length_a 8.060
_cell.length_a_esd ?
_cell.length_b 9.480
_cell.length_b_esd ?
_cell.length_c 25.660
_cell.length_c_esd ?
_cell.volume ?
_cell.volume_esd ?
_cell.Z_PDB 2
_cell.reciprocal_angle_alpha ?
_cell.reciprocal_angle_beta ?
_cell.reciprocal_angle_gamma ?
_cell.reciprocal_angle_alpha_esd ?
_cell.reciprocal_angle_beta_esd ?
_cell.reciprocal_angle_gamma_esd ?
_cell.reciprocal_length_a ?
_cell.reciprocal_length_b ?
_cell.reciprocal_length_c ?
_cell.reciprocal_length_a_esd ?
_cell.reciprocal_length_b_esd ?
_cell.reciprocal_length_c_esd ?
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 6C3G
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 1
_symmetry.space_group_name_Hall ?
_symmetry.space_group_name_H-M 'P 1'
_symmetry.pdbx_full_space_group_name_H-M ?
#
_exptl.absorpt_coefficient_mu ?
_exptl.absorpt_correction_T_max ?
_exptl.absorpt_correction_T_min ?
_exptl.absorpt_correction_type ?
_exptl.absorpt_process_details ?
_exptl.entry_id 6C3G
_exptl.crystals_number 1
_exptl.details ?
_exptl.method 'X-RAY DIFFRACTION'
_exptl.method_details ?
#
_exptl_crystal.colour ?
_exptl_crystal.density_diffrn ?
_exptl_crystal.density_Matthews 1.53
_exptl_crystal.density_method ?
_exptl_crystal.density_percent_sol 19.71
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.id 1
_exptl_crystal.preparation ?
_exptl_crystal.size_max ?
_exptl_crystal.size_mid ?
_exptl_crystal.size_min ?
_exptl_crystal.size_rad ?
_exptl_crystal.colour_lustre ?
_exptl_crystal.colour_modifier ?
_exptl_crystal.colour_primary ?
_exptl_crystal.density_meas ?
_exptl_crystal.density_meas_esd ?
_exptl_crystal.density_meas_gt ?
_exptl_crystal.density_meas_lt ?
_exptl_crystal.density_meas_temp ?
_exptl_crystal.density_meas_temp_esd ?
_exptl_crystal.density_meas_temp_gt ?
_exptl_crystal.density_meas_temp_lt ?
_exptl_crystal.pdbx_crystal_image_url ?
_exptl_crystal.pdbx_crystal_image_format ?
_exptl_crystal.pdbx_mosaicity ?
_exptl_crystal.pdbx_mosaicity_esd ?
#
_exptl_crystal_grow.apparatus ?
_exptl_crystal_grow.atmosphere ?
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.details ?
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.method_ref ?
_exptl_crystal_grow.pH 3.5
_exptl_crystal_grow.pressure ?
_exptl_crystal_grow.pressure_esd ?
_exptl_crystal_grow.seeding ?
_exptl_crystal_grow.seeding_ref ?
_exptl_crystal_grow.temp 298
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.temp_esd ?
_exptl_crystal_grow.time ?
_exptl_crystal_grow.pdbx_details '0.1 M Citric acid pH 3.5, 2.0 M Ammonium sulfate, 25% Glycerol'
_exptl_crystal_grow.pdbx_pH_range ?
#
_diffrn.ambient_environment ?
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.ambient_temp_esd ?
_diffrn.crystal_id 1
_diffrn.crystal_support ?
_diffrn.crystal_treatment ?
_diffrn.details ?
_diffrn.id 1
_diffrn.ambient_pressure ?
_diffrn.ambient_pressure_esd ?
_diffrn.ambient_pressure_gt ?
_diffrn.ambient_pressure_lt ?
_diffrn.ambient_temp_gt ?
_diffrn.ambient_temp_lt ?
#
_diffrn_detector.details ?
_diffrn_detector.detector CCD
_diffrn_detector.diffrn_id 1
_diffrn_detector.type 'ADSC QUANTUM 315'
_diffrn_detector.area_resol_mean ?
_diffrn_detector.dtime ?
_diffrn_detector.pdbx_frames_total ?
_diffrn_detector.pdbx_collection_time_total ?
_diffrn_detector.pdbx_collection_date 2013-03-01
#
_diffrn_radiation.collimation ?
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.filter_edge ?
_diffrn_radiation.inhomogeneity ?
_diffrn_radiation.monochromator ?
_diffrn_radiation.polarisn_norm ?
_diffrn_radiation.polarisn_ratio ?
_diffrn_radiation.probe ?
_diffrn_radiation.type ?
_diffrn_radiation.xray_symbol ?
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.pdbx_wavelength_list ?
_diffrn_radiation.pdbx_wavelength ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_analyzer ?
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 0.9792
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.current ?
_diffrn_source.details ?
_diffrn_source.diffrn_id 1
_diffrn_source.power ?
_diffrn_source.size ?
_diffrn_source.source SYNCHROTRON
_diffrn_source.target ?
_diffrn_source.type 'APS BEAMLINE 24-ID-E'
_diffrn_source.voltage ?
_diffrn_source.take-off_angle ?
_diffrn_source.pdbx_wavelength_list 0.9792
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_synchrotron_beamline 24-ID-E
_diffrn_source.pdbx_synchrotron_site APS
#
_reflns.B_iso_Wilson_estimate 9.920
_reflns.entry_id 6C3G
_reflns.data_reduction_details ?
_reflns.data_reduction_method ?
_reflns.d_resolution_high 1.600
_reflns.d_resolution_low 12.566
_reflns.details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.number_all ?
_reflns.number_obs 871
_reflns.observed_criterion ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.observed_criterion_I_max ?
_reflns.observed_criterion_I_min ?
_reflns.observed_criterion_sigma_F ?
_reflns.observed_criterion_sigma_I ?
_reflns.percent_possible_obs 95.600
_reflns.R_free_details ?
_reflns.Rmerge_F_all ?
_reflns.Rmerge_F_obs ?
_reflns.Friedel_coverage ?
_reflns.number_gt ?
_reflns.threshold_expression ?
_reflns.pdbx_redundancy 2.912
_reflns.pdbx_Rmerge_I_obs 0.138
_reflns.pdbx_Rmerge_I_all ?
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_av_sigmaI ?
_reflns.pdbx_netI_over_sigmaI 5.720
_reflns.pdbx_res_netI_over_av_sigmaI_2 ?
_reflns.pdbx_res_netI_over_sigmaI_2 ?
_reflns.pdbx_chi_squared 1.154
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_d_res_high_opt ?
_reflns.pdbx_d_res_low_opt ?
_reflns.pdbx_d_res_opt_method ?
_reflns.phase_calculation_details ?
_reflns.pdbx_Rrim_I_all 0.169
_reflns.pdbx_Rpim_I_all ?
_reflns.pdbx_d_opt ?
_reflns.pdbx_number_measured_all 2536
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
_reflns.pdbx_CC_half 0.988
_reflns.pdbx_R_split ?
#
loop_
_reflns_shell.d_res_high
_reflns_shell.d_res_low
_reflns_shell.meanI_over_sigI_all
_reflns_shell.meanI_over_sigI_obs
_reflns_shell.number_measured_all
_reflns_shell.number_measured_obs
_reflns_shell.number_possible
_reflns_shell.number_unique_all
_reflns_shell.number_unique_obs
_reflns_shell.percent_possible_all
_reflns_shell.percent_possible_obs
_reflns_shell.Rmerge_F_all
_reflns_shell.Rmerge_F_obs
_reflns_shell.Rmerge_I_all
_reflns_shell.Rmerge_I_obs
_reflns_shell.meanI_over_sigI_gt
_reflns_shell.meanI_over_uI_all
_reflns_shell.meanI_over_uI_gt
_reflns_shell.number_measured_gt
_reflns_shell.number_unique_gt
_reflns_shell.percent_possible_gt
_reflns_shell.Rmerge_F_gt
_reflns_shell.Rmerge_I_gt
_reflns_shell.pdbx_redundancy
_reflns_shell.pdbx_Rsym_value
_reflns_shell.pdbx_chi_squared
_reflns_shell.pdbx_netI_over_sigmaI_all
_reflns_shell.pdbx_netI_over_sigmaI_obs
_reflns_shell.pdbx_Rrim_I_all
_reflns_shell.pdbx_Rpim_I_all
_reflns_shell.pdbx_rejects
_reflns_shell.pdbx_ordinal
_reflns_shell.pdbx_diffrn_id
_reflns_shell.pdbx_CC_half
_reflns_shell.pdbx_R_split
1.600 1.700 ? 1.410 ? ? ? ? 129 93.500 ? ? ? ? 0.675 ? ? ? ? ? ? ? ? 2.930 ? ? ? ? 0.830 ? ? 1 1 0.765 ?
1.700 1.810 ? 2.020 ? ? ? ? 128 95.500 ? ? ? ? 0.548 ? ? ? ? ? ? ? ? 3.023 ? ? ? ? 0.671 ? ? 2 1 0.632 ?
1.810 1.960 ? 4.080 ? ? ? ? 140 94.600 ? ? ? ? 0.230 ? ? ? ? ? ? ? ? 3.064 ? ? ? ? 0.281 ? ? 3 1 0.954 ?
1.960 2.150 ? 4.850 ? ? ? ? 103 98.100 ? ? ? ? 0.211 ? ? ? ? ? ? ? ? 2.825 ? ? ? ? 0.257 ? ? 4 1 0.929 ?
2.150 2.400 ? 6.910 ? ? ? ? 114 96.600 ? ? ? ? 0.174 ? ? ? ? ? ? ? ? 3.026 ? ? ? ? 0.214 ? ? 5 1 0.945 ?
2.400 2.770 ? 8.080 ? ? ? ? 90 100.000 ? ? ? ? 0.128 ? ? ? ? ? ? ? ? 2.944 ? ? ? ? 0.156 ? ? 6 1 0.920 ?
2.770 3.400 ? 9.350 ? ? ? ? 76 95.000 ? ? ? ? 0.088 ? ? ? ? ? ? ? ? 2.632 ? ? ? ? 0.106 ? ? 7 1 0.991 ?
3.400 4.800 ? 13.560 ? ? ? ? 64 95.500 ? ? ? ? 0.061 ? ? ? ? ? ? ? ? 2.609 ? ? ? ? 0.076 ? ? 8 1 0.986 ?
4.800 12.566 ? 14.010 ? ? ? ? 27 87.100 ? ? ? ? 0.039 ? ? ? ? ? ? ? ? 2.741 ? ? ? ? 0.047 ? ? 9 1 1.000 ?
#
_refine.aniso_B[1][1] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[2][3] ?
_refine.aniso_B[3][3] ?
_refine.B_iso_max 32.440
_refine.B_iso_mean 14.4500
_refine.B_iso_min 5.840
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.details ?
_refine.diff_density_max ?
_refine.diff_density_max_esd ?
_refine.diff_density_min ?
_refine.diff_density_min_esd ?
_refine.diff_density_rms ?
_refine.diff_density_rms_esd ?
_refine.entry_id 6C3G
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.ls_abs_structure_details ?
_refine.ls_abs_structure_Flack ?
_refine.ls_abs_structure_Flack_esd ?
_refine.ls_abs_structure_Rogers ?
_refine.ls_abs_structure_Rogers_esd ?
_refine.ls_d_res_high 1.6010
_refine.ls_d_res_low 12.5660
_refine.ls_extinction_coef ?
_refine.ls_extinction_coef_esd ?
_refine.ls_extinction_expression ?
_refine.ls_extinction_method ?
_refine.ls_goodness_of_fit_all ?
_refine.ls_goodness_of_fit_all_esd ?
_refine.ls_goodness_of_fit_obs ?
_refine.ls_goodness_of_fit_obs_esd ?
_refine.ls_hydrogen_treatment ?
_refine.ls_matrix_type ?
_refine.ls_number_constraints ?
_refine.ls_number_parameters ?
_refine.ls_number_reflns_all ?
_refine.ls_number_reflns_obs 870
_refine.ls_number_reflns_R_free 87
_refine.ls_number_reflns_R_work ?
_refine.ls_number_restraints ?
_refine.ls_percent_reflns_obs 95.7100
_refine.ls_percent_reflns_R_free 10.0000
_refine.ls_R_factor_all ?
_refine.ls_R_factor_obs 0.1848
_refine.ls_R_factor_R_free 0.2116
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_R_factor_R_work 0.1812
_refine.ls_R_Fsqd_factor_obs ?
_refine.ls_R_I_factor_obs ?
_refine.ls_redundancy_reflns_all ?
_refine.ls_redundancy_reflns_obs ?
_refine.ls_restrained_S_all ?
_refine.ls_restrained_S_obs ?
_refine.ls_shift_over_esd_max ?
_refine.ls_shift_over_esd_mean ?
_refine.ls_structure_factor_coef ?
_refine.ls_weighting_details ?
_refine.ls_weighting_scheme ?
_refine.ls_wR_factor_all ?
_refine.ls_wR_factor_obs ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.occupancy_max ?
_refine.occupancy_min ?
_refine.solvent_model_details ?
_refine.solvent_model_param_bsol ?
_refine.solvent_model_param_ksol ?
_refine.ls_R_factor_gt ?
_refine.ls_goodness_of_fit_gt ?
_refine.ls_goodness_of_fit_ref ?
_refine.ls_shift_over_su_max ?
_refine.ls_shift_over_su_max_lt ?
_refine.ls_shift_over_su_mean ?
_refine.ls_shift_over_su_mean_lt ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 2.000
_refine.pdbx_ls_sigma_Fsqd ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_starting_model ?
_refine.pdbx_stereochemistry_target_values ?
_refine.pdbx_R_Free_selection_details ?
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.pdbx_solvent_vdw_probe_radii 1.1100
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii 0.9000
_refine.pdbx_real_space_R ?
_refine.pdbx_density_correlation ?
_refine.pdbx_pd_number_of_powder_patterns ?
_refine.pdbx_pd_number_of_points ?
_refine.pdbx_pd_meas_number_of_points ?
_refine.pdbx_pd_proc_ls_prof_R_factor ?
_refine.pdbx_pd_proc_ls_prof_wR_factor ?
_refine.pdbx_pd_Marquardt_correlation_coeff ?
_refine.pdbx_pd_Fsqrd_R_factor ?
_refine.pdbx_pd_ls_matrix_band_width ?
_refine.pdbx_overall_phase_error 24.3500
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_diffrn_id 1
_refine.overall_SU_B ?
_refine.overall_SU_ML 0.0000
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_average_fsc_overall ?
_refine.pdbx_average_fsc_work ?
_refine.pdbx_average_fsc_free ?
#
_refine_hist.cycle_id final
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.d_res_high 1.6010
_refine_hist.d_res_low 12.5660
_refine_hist.pdbx_number_atoms_ligand 11
_refine_hist.number_atoms_solvent 2
_refine_hist.number_atoms_total 95
_refine_hist.pdbx_number_residues_total 12
_refine_hist.pdbx_B_iso_mean_ligand 27.18
_refine_hist.pdbx_B_iso_mean_solvent 26.62
_refine_hist.pdbx_number_atoms_protein 82
_refine_hist.pdbx_number_atoms_nucleic_acid 0
#
loop_
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.criterion
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.number
_refine_ls_restr.rejects
_refine_ls_restr.type
_refine_ls_restr.weight
_refine_ls_restr.pdbx_restraint_function
'X-RAY DIFFRACTION' ? 0.006 ? 89 ? f_bond_d ? ?
'X-RAY DIFFRACTION' ? 1.170 ? 115 ? f_angle_d ? ?
'X-RAY DIFFRACTION' ? 0.069 ? 14 ? f_chiral_restr ? ?
'X-RAY DIFFRACTION' ? 0.003 ? 12 ? f_plane_restr ? ?
'X-RAY DIFFRACTION' ? 12.957 ? 32 ? f_dihedral_angle_d ? ?
#
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_ls_shell.d_res_high 1.6005
_refine_ls_shell.d_res_low 1.659
_refine_ls_shell.number_reflns_all ?
_refine_ls_shell.number_reflns_obs 70
_refine_ls_shell.number_reflns_R_free ?
_refine_ls_shell.number_reflns_R_work ?
_refine_ls_shell.percent_reflns_obs 92.11
_refine_ls_shell.percent_reflns_R_free 8
_refine_ls_shell.R_factor_all ?
_refine_ls_shell.R_factor_obs ?
_refine_ls_shell.R_factor_R_free 0.2452
_refine_ls_shell.R_factor_R_free_error 0.0000
_refine_ls_shell.R_factor_R_work 0.2499
_refine_ls_shell.redundancy_reflns_all ?
_refine_ls_shell.redundancy_reflns_obs ?
_refine_ls_shell.wR_factor_all ?
_refine_ls_shell.wR_factor_obs ?
_refine_ls_shell.wR_factor_R_free ?
_refine_ls_shell.wR_factor_R_work ?
_refine_ls_shell.pdbx_total_number_of_bins_used 1
_refine_ls_shell.pdbx_phase_error ?
_refine_ls_shell.pdbx_fsc_work ?
_refine_ls_shell.pdbx_fsc_free ?
#
_struct.entry_id 6C3G
_struct.title 'AMYLOID FORMING PEPTIDE KALGIS FROM TRANSTHYRETIN'
_struct.pdbx_model_details ?
_struct.pdbx_formula_weight ?
_struct.pdbx_formula_weight_method ?
_struct.pdbx_model_type_details ?
_struct.pdbx_CASP_flag N
#
_struct_keywords.entry_id 6C3G
_struct_keywords.text 'amyloid, transthyretin, fibril, PROTEIN FIBRIL'
_struct_keywords.pdbx_keywords 'PROTEIN FIBRIL'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 1 ?
C N N 2 ?
D N N 3 ?
E N N 4 ?
#
_struct_ref.id 1
_struct_ref.db_name PDB
_struct_ref.db_code 6C3G
_struct_ref.pdbx_db_accession 6C3G
_struct_ref.pdbx_db_isoform ?
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_align_begin 1
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.pdbx_PDB_id_code
_struct_ref_seq.pdbx_strand_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.pdbx_seq_align_beg_ins_code
_struct_ref_seq.seq_align_end
_struct_ref_seq.pdbx_seq_align_end_ins_code
_struct_ref_seq.pdbx_db_accession
_struct_ref_seq.db_align_beg
_struct_ref_seq.pdbx_db_align_beg_ins_code
_struct_ref_seq.db_align_end
_struct_ref_seq.pdbx_db_align_end_ins_code
_struct_ref_seq.pdbx_auth_seq_align_beg
_struct_ref_seq.pdbx_auth_seq_align_end
1 1 6C3G A 1 ? 6 ? 6C3G 1 ? 6 ? 1 6
2 1 6C3G B 1 ? 6 ? 6C3G 1 ? 6 ? 1 6
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details eicosameric
_pdbx_struct_assembly.oligomeric_count 20
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8,9,10
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E
#
_pdbx_struct_assembly_auth_evidence.id 1
_pdbx_struct_assembly_auth_evidence.assembly_id 1
_pdbx_struct_assembly_auth_evidence.experimental_support 'scanning transmission electron microscopy'
_pdbx_struct_assembly_auth_evidence.details ?
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 1_545 x,y-1,z 1.0000000000 0.0000000000 0.0000000000 3.2501236693 0.0000000000 1.0000000000
0.0000000000 -8.9054531684 0.0000000000 0.0000000000 1.0000000000 0.0000000000
3 'crystal symmetry operation' 1_565 x,y+1,z 1.0000000000 0.0000000000 0.0000000000 -3.2501236693 0.0000000000 1.0000000000
0.0000000000 8.9054531684 0.0000000000 0.0000000000 1.0000000000 0.0000000000
4 'crystal symmetry operation' 1_535 x,y-2,z 1.0000000000 0.0000000000 0.0000000000 6.5002473385 0.0000000000 1.0000000000
0.0000000000 -17.8109063368 0.0000000000 0.0000000000 1.0000000000 0.0000000000
5 'crystal symmetry operation' 1_575 x,y+2,z 1.0000000000 0.0000000000 0.0000000000 -6.5002473385 0.0000000000 1.0000000000
0.0000000000 17.8109063368 0.0000000000 0.0000000000 1.0000000000 0.0000000000
6 'crystal symmetry operation' 1_655 x+1,y,z 1.0000000000 0.0000000000 0.0000000000 8.0600000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
7 'crystal symmetry operation' 1_665 x+1,y+1,z 1.0000000000 0.0000000000 0.0000000000 4.8098763307 0.0000000000 1.0000000000
0.0000000000 8.9054531684 0.0000000000 0.0000000000 1.0000000000 0.0000000000
8 'crystal symmetry operation' 1_635 x+1,y-2,z 1.0000000000 0.0000000000 0.0000000000 14.5602473385 0.0000000000 1.0000000000
0.0000000000 -17.8109063368 0.0000000000 0.0000000000 1.0000000000 0.0000000000
9 'crystal symmetry operation' 1_675 x+1,y+2,z 1.0000000000 0.0000000000 0.0000000000 1.5597526615 0.0000000000 1.0000000000
0.0000000000 17.8109063368 0.0000000000 0.0000000000 1.0000000000 0.0000000000
10 'crystal symmetry operation' 1_645 x+1,y-1,z 1.0000000000 0.0000000000 0.0000000000 11.3101236693 0.0000000000 1.0000000000
0.0000000000 -8.9054531684 0.0000000000 0.0000000000 1.0000000000 0.0000000000
#
_struct_sheet.id AA1
_struct_sheet.type ?
_struct_sheet.number_strands 2
_struct_sheet.details ?
#
_struct_sheet_order.sheet_id AA1
_struct_sheet_order.range_id_1 1
_struct_sheet_order.range_id_2 2
_struct_sheet_order.offset ?
_struct_sheet_order.sense anti-parallel
#
loop_
_struct_sheet_range.sheet_id
_struct_sheet_range.id
_struct_sheet_range.beg_label_comp_id
_struct_sheet_range.beg_label_asym_id
_struct_sheet_range.beg_label_seq_id
_struct_sheet_range.pdbx_beg_PDB_ins_code
_struct_sheet_range.end_label_comp_id
_struct_sheet_range.end_label_asym_id
_struct_sheet_range.end_label_seq_id
_struct_sheet_range.pdbx_end_PDB_ins_code
_struct_sheet_range.beg_auth_comp_id
_struct_sheet_range.beg_auth_asym_id
_struct_sheet_range.beg_auth_seq_id
_struct_sheet_range.end_auth_comp_id
_struct_sheet_range.end_auth_asym_id
_struct_sheet_range.end_auth_seq_id
AA1 1 LEU A 3 ? ILE A 5 ? LEU A 3 ILE A 5
AA1 2 LEU B 3 ? ILE B 5 ? LEU B 3 ILE B 5
#
_pdbx_struct_sheet_hbond.sheet_id AA1
_pdbx_struct_sheet_hbond.range_id_1 1
_pdbx_struct_sheet_hbond.range_id_2 2
_pdbx_struct_sheet_hbond.range_1_label_atom_id N
_pdbx_struct_sheet_hbond.range_1_label_comp_id GLY
_pdbx_struct_sheet_hbond.range_1_label_asym_id A
_pdbx_struct_sheet_hbond.range_1_label_seq_id 4
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code ?
_pdbx_struct_sheet_hbond.range_1_auth_atom_id N
_pdbx_struct_sheet_hbond.range_1_auth_comp_id GLY
_pdbx_struct_sheet_hbond.range_1_auth_asym_id A
_pdbx_struct_sheet_hbond.range_1_auth_seq_id 4
_pdbx_struct_sheet_hbond.range_2_label_atom_id O
_pdbx_struct_sheet_hbond.range_2_label_comp_id GLY
_pdbx_struct_sheet_hbond.range_2_label_asym_id B
_pdbx_struct_sheet_hbond.range_2_label_seq_id 4
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code ?
_pdbx_struct_sheet_hbond.range_2_auth_atom_id O
_pdbx_struct_sheet_hbond.range_2_auth_comp_id GLY
_pdbx_struct_sheet_hbond.range_2_auth_asym_id B
_pdbx_struct_sheet_hbond.range_2_auth_seq_id 4
#
loop_
_struct_site.id
_struct_site.pdbx_evidence_code
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_struct_site.pdbx_auth_ins_code
_struct_site.pdbx_num_residues
_struct_site.details
AC1 Software A SO4 101 ? 10 'binding site for residue SO4 A 101'
AC2 Software B GOL 101 ? 10 'binding site for residue GOL B 101'
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 10 LYS A 1 ? LYS A 1 . ? 1_555 ?
2 AC1 10 LYS A 1 ? LYS A 1 . ? 1_545 ?
3 AC1 10 LYS A 1 ? LYS A 1 . ? 1_655 ?
4 AC1 10 ALA A 2 ? ALA A 2 . ? 1_545 ?
5 AC1 10 LYS B 1 ? LYS B 1 . ? 1_756 ?
6 AC1 10 LYS B 1 ? LYS B 1 . ? 1_656 ?
7 AC1 10 SER B 6 ? SER B 6 . ? 1_555 ?
8 AC1 10 GOL D . ? GOL B 101 . ? 1_445 ?
9 AC1 10 GOL D . ? GOL B 101 . ? 1_555 ?
10 AC1 10 GOL D . ? GOL B 101 . ? 1_545 ?
11 AC2 10 LYS A 1 ? LYS A 1 . ? 1_655 ?
12 AC2 10 LYS A 1 ? LYS A 1 . ? 1_665 ?
13 AC2 10 SER A 6 ? SER A 6 . ? 1_656 ?
14 AC2 10 SO4 C . ? SO4 A 101 . ? 1_555 ?
15 AC2 10 SO4 C . ? SO4 A 101 . ? 1_665 ?
16 AC2 10 SO4 C . ? SO4 A 101 . ? 1_565 ?
17 AC2 10 HOH E . ? HOH A 201 . ? 1_656 ?
18 AC2 10 LYS B 1 ? LYS B 1 . ? 1_666 ?
19 AC2 10 LYS B 1 ? LYS B 1 . ? 1_766 ?
20 AC2 10 SER B 6 ? SER B 6 . ? 1_555 ?
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
ALA N N N N 1
ALA CA C N S 2
ALA C C N N 3
ALA O O N N 4
ALA CB C N N 5
ALA OXT O N N 6
ALA H H N N 7
ALA H2 H N N 8
ALA HA H N N 9
ALA HB1 H N N 10
ALA HB2 H N N 11
ALA HB3 H N N 12
ALA HXT H N N 13
GLY N N N N 14
GLY CA C N N 15
GLY C C N N 16
GLY O O N N 17
GLY OXT O N N 18
GLY H H N N 19
GLY H2 H N N 20
GLY HA2 H N N 21
GLY HA3 H N N 22
GLY HXT H N N 23
GOL C1 C N N 24
GOL O1 O N N 25
GOL C2 C N N 26
GOL O2 O N N 27
GOL C3 C N N 28
GOL O3 O N N 29
GOL H11 H N N 30
GOL H12 H N N 31
GOL HO1 H N N 32
GOL H2 H N N 33
GOL HO2 H N N 34
GOL H31 H N N 35
GOL H32 H N N 36
GOL HO3 H N N 37
HOH O O N N 38
HOH H1 H N N 39
HOH H2 H N N 40
ILE N N N N 41
ILE CA C N S 42
ILE C C N N 43
ILE O O N N 44
ILE CB C N S 45
ILE CG1 C N N 46
ILE CG2 C N N 47
ILE CD1 C N N 48
ILE OXT O N N 49
ILE H H N N 50
ILE H2 H N N 51
ILE HA H N N 52
ILE HB H N N 53
ILE HG12 H N N 54
ILE HG13 H N N 55
ILE HG21 H N N 56
ILE HG22 H N N 57
ILE HG23 H N N 58
ILE HD11 H N N 59
ILE HD12 H N N 60
ILE HD13 H N N 61
ILE HXT H N N 62
LEU N N N N 63
LEU CA C N S 64
LEU C C N N 65
LEU O O N N 66
LEU CB C N N 67
LEU CG C N N 68
LEU CD1 C N N 69
LEU CD2 C N N 70
LEU OXT O N N 71
LEU H H N N 72
LEU H2 H N N 73
LEU HA H N N 74
LEU HB2 H N N 75
LEU HB3 H N N 76
LEU HG H N N 77
LEU HD11 H N N 78
LEU HD12 H N N 79
LEU HD13 H N N 80
LEU HD21 H N N 81
LEU HD22 H N N 82
LEU HD23 H N N 83
LEU HXT H N N 84
LYS N N N N 85
LYS CA C N S 86
LYS C C N N 87
LYS O O N N 88
LYS CB C N N 89
LYS CG C N N 90
LYS CD C N N 91
LYS CE C N N 92
LYS NZ N N N 93
LYS OXT O N N 94
LYS H H N N 95
LYS H2 H N N 96
LYS HA H N N 97
LYS HB2 H N N 98
LYS HB3 H N N 99
LYS HG2 H N N 100
LYS HG3 H N N 101
LYS HD2 H N N 102
LYS HD3 H N N 103
LYS HE2 H N N 104
LYS HE3 H N N 105
LYS HZ1 H N N 106
LYS HZ2 H N N 107
LYS HZ3 H N N 108
LYS HXT H N N 109
SER N N N N 110
SER CA C N S 111
SER C C N N 112
SER O O N N 113
SER CB C N N 114
SER OG O N N 115
SER OXT O N N 116
SER H H N N 117
SER H2 H N N 118
SER HA H N N 119
SER HB2 H N N 120
SER HB3 H N N 121
SER HG H N N 122
SER HXT H N N 123
SO4 S S N N 124
SO4 O1 O N N 125
SO4 O2 O N N 126
SO4 O3 O N N 127
SO4 O4 O N N 128
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ALA N CA sing N N 1
ALA N H sing N N 2
ALA N H2 sing N N 3
ALA CA C sing N N 4
ALA CA CB sing N N 5
ALA CA HA sing N N 6
ALA C O doub N N 7
ALA C OXT sing N N 8
ALA CB HB1 sing N N 9
ALA CB HB2 sing N N 10
ALA CB HB3 sing N N 11
ALA OXT HXT sing N N 12
GLY N CA sing N N 13
GLY N H sing N N 14
GLY N H2 sing N N 15
GLY CA C sing N N 16
GLY CA HA2 sing N N 17
GLY CA HA3 sing N N 18
GLY C O doub N N 19
GLY C OXT sing N N 20
GLY OXT HXT sing N N 21
GOL C1 O1 sing N N 22
GOL C1 C2 sing N N 23
GOL C1 H11 sing N N 24
GOL C1 H12 sing N N 25
GOL O1 HO1 sing N N 26
GOL C2 O2 sing N N 27
GOL C2 C3 sing N N 28
GOL C2 H2 sing N N 29
GOL O2 HO2 sing N N 30
GOL C3 O3 sing N N 31
GOL C3 H31 sing N N 32
GOL C3 H32 sing N N 33
GOL O3 HO3 sing N N 34
HOH O H1 sing N N 35
HOH O H2 sing N N 36
ILE N CA sing N N 37
ILE N H sing N N 38
ILE N H2 sing N N 39
ILE CA C sing N N 40
ILE CA CB sing N N 41
ILE CA HA sing N N 42
ILE C O doub N N 43
ILE C OXT sing N N 44
ILE CB CG1 sing N N 45
ILE CB CG2 sing N N 46
ILE CB HB sing N N 47
ILE CG1 CD1 sing N N 48
ILE CG1 HG12 sing N N 49
ILE CG1 HG13 sing N N 50
ILE CG2 HG21 sing N N 51
ILE CG2 HG22 sing N N 52
ILE CG2 HG23 sing N N 53
ILE CD1 HD11 sing N N 54
ILE CD1 HD12 sing N N 55
ILE CD1 HD13 sing N N 56
ILE OXT HXT sing N N 57
LEU N CA sing N N 58
LEU N H sing N N 59
LEU N H2 sing N N 60
LEU CA C sing N N 61
LEU CA CB sing N N 62
LEU CA HA sing N N 63
LEU C O doub N N 64
LEU C OXT sing N N 65
LEU CB CG sing N N 66
LEU CB HB2 sing N N 67
LEU CB HB3 sing N N 68
LEU CG CD1 sing N N 69
LEU CG CD2 sing N N 70
LEU CG HG sing N N 71
LEU CD1 HD11 sing N N 72
LEU CD1 HD12 sing N N 73
LEU CD1 HD13 sing N N 74
LEU CD2 HD21 sing N N 75
LEU CD2 HD22 sing N N 76
LEU CD2 HD23 sing N N 77
LEU OXT HXT sing N N 78
LYS N CA sing N N 79
LYS N H sing N N 80
LYS N H2 sing N N 81
LYS CA C sing N N 82
LYS CA CB sing N N 83
LYS CA HA sing N N 84
LYS C O doub N N 85
LYS C OXT sing N N 86
LYS CB CG sing N N 87
LYS CB HB2 sing N N 88
LYS CB HB3 sing N N 89
LYS CG CD sing N N 90
LYS CG HG2 sing N N 91
LYS CG HG3 sing N N 92
LYS CD CE sing N N 93
LYS CD HD2 sing N N 94
LYS CD HD3 sing N N 95
LYS CE NZ sing N N 96
LYS CE HE2 sing N N 97
LYS CE HE3 sing N N 98
LYS NZ HZ1 sing N N 99
LYS NZ HZ2 sing N N 100
LYS NZ HZ3 sing N N 101
LYS OXT HXT sing N N 102
SER N CA sing N N 103
SER N H sing N N 104
SER N H2 sing N N 105
SER CA C sing N N 106
SER CA CB sing N N 107
SER CA HA sing N N 108
SER C O doub N N 109
SER C OXT sing N N 110
SER CB OG sing N N 111
SER CB HB2 sing N N 112
SER CB HB3 sing N N 113
SER OG HG sing N N 114
SER OXT HXT sing N N 115
SO4 S O1 doub N N 116
SO4 S O2 doub N N 117
SO4 S O3 sing N N 118
SO4 S O4 sing N N 119
#
_pdbx_audit_support.funding_organization 'Seventh Framework Programme for Research'
_pdbx_audit_support.country 'United States'
_pdbx_audit_support.grant_number 298559
_pdbx_audit_support.ordinal 1
#
_atom_sites.entry_id 6C3G
_atom_sites.fract_transf_matrix[1][1] 0.124069
_atom_sites.fract_transf_matrix[1][2] 0.045278
_atom_sites.fract_transf_matrix[1][3] 0.021825
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.112290
_atom_sites.fract_transf_matrix[2][3] 0.019373
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.039791
_atom_sites.fract_transf_vector[1] 0.000000
_atom_sites.fract_transf_vector[2] 0.000000
_atom_sites.fract_transf_vector[3] 0.000000
#
loop_
_atom_type.symbol
C
N
O
S
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 N N . LYS A 1 1 ? -0.653 -4.667 8.869 1.00 20.28 ? 1 LYS A N 1
ATOM 2 C CA . LYS A 1 1 ? -0.020 -5.065 7.617 1.00 17.04 ? 1 LYS A CA 1
ATOM 3 C C . LYS A 1 1 ? -0.290 -4.048 6.502 1.00 12.73 ? 1 LYS A C 1
ATOM 4 O O . LYS A 1 1 ? -1.387 -3.481 6.408 1.00 13.19 ? 1 LYS A O 1
ATOM 5 C CB . LYS A 1 1 ? -0.498 -6.458 7.187 1.00 14.97 ? 1 LYS A CB 1
ATOM 6 C CG . LYS A 1 1 ? -0.120 -7.625 8.115 1.00 11.82 ? 1 LYS A CG 1
ATOM 7 C CD . LYS A 1 1 ? -0.864 -8.885 7.661 1.00 19.94 ? 1 LYS A CD 1
ATOM 8 C CE . LYS A 1 1 ? -0.257 -10.165 8.214 1.00 20.47 ? 1 LYS A CE 1
ATOM 9 N NZ . LYS A 1 1 ? 1.078 -10.449 7.608 1.00 23.24 ? 1 LYS A NZ 1
ATOM 10 N N . ALA A 1 2 ? 0.723 -3.822 5.670 1.00 10.39 ? 2 ALA A N 1
ATOM 11 C CA . ALA A 1 2 ? 0.626 -2.907 4.540 1.00 7.62 ? 2 ALA A CA 1
ATOM 12 C C . ALA A 1 2 ? 0.288 -3.675 3.261 1.00 8.63 ? 2 ALA A C 1
ATOM 13 O O . ALA A 1 2 ? 0.530 -4.889 3.169 1.00 8.14 ? 2 ALA A O 1
ATOM 14 C CB . ALA A 1 2 ? 1.939 -2.156 4.369 1.00 9.25 ? 2 ALA A CB 1
ATOM 15 N N . LEU A 1 3 ? -0.270 -2.966 2.284 1.00 5.84 ? 3 LEU A N 1
ATOM 16 C CA . LEU A 1 3 ? -0.695 -3.557 1.022 1.00 9.09 ? 3 LEU A CA 1
ATOM 17 C C . LEU A 1 3 ? -0.172 -2.747 -0.151 1.00 8.63 ? 3 LEU A C 1
ATOM 18 O O . LEU A 1 3 ? -0.333 -1.520 -0.189 1.00 8.27 ? 3 LEU A O 1
ATOM 19 C CB . LEU A 1 3 ? -2.231 -3.586 0.937 1.00 8.40 ? 3 LEU A CB 1
ATOM 20 C CG . LEU A 1 3 ? -2.754 -3.878 -0.473 1.00 10.29 ? 3 LEU A CG 1
ATOM 21 C CD1 . LEU A 1 3 ? -2.379 -5.301 -0.862 1.00 10.81 ? 3 LEU A CD1 1
ATOM 22 C CD2 . LEU A 1 3 ? -4.257 -3.666 -0.592 1.00 13.06 ? 3 LEU A CD2 1
ATOM 23 N N . GLY A 1 4 ? 0.412 -3.424 -1.133 1.00 7.36 ? 4 GLY A N 1
ATOM 24 C CA . GLY A 1 4 ? 0.800 -2.745 -2.351 1.00 7.85 ? 4 GLY A CA 1
ATOM 25 C C . GLY A 1 4 ? 0.452 -3.534 -3.594 1.00 8.48 ? 4 GLY A C 1
ATOM 26 O O . GLY A 1 4 ? 0.613 -4.759 -3.643 1.00 7.47 ? 4 GLY A O 1
ATOM 27 N N . ILE A 1 5 ? -0.013 -2.816 -4.604 1.00 7.29 ? 5 ILE A N 1
ATOM 28 C CA . ILE A 1 5 ? -0.355 -3.385 -5.902 1.00 9.44 ? 5 ILE A CA 1
ATOM 29 C C . ILE A 1 5 ? 0.264 -2.476 -6.952 1.00 9.66 ? 5 ILE A C 1
ATOM 30 O O . ILE A 1 5 ? 0.038 -1.265 -6.955 1.00 10.17 ? 5 ILE A O 1
ATOM 31 C CB . ILE A 1 5 ? -1.891 -3.441 -6.113 1.00 8.80 ? 5 ILE A CB 1
ATOM 32 C CG1 . ILE A 1 5 ? -2.549 -4.347 -5.070 1.00 8.87 ? 5 ILE A CG1 1
ATOM 33 C CG2 . ILE A 1 5 ? -2.237 -3.954 -7.515 1.00 10.05 ? 5 ILE A CG2 1
ATOM 34 C CD1 . ILE A 1 5 ? -4.070 -4.223 -5.048 1.00 8.71 ? 5 ILE A CD1 1
ATOM 35 N N . SER A 1 6 ? 1.056 -3.063 -7.841 1.00 10.59 ? 6 SER A N 1
ATOM 36 C CA . SER A 1 6 ? 1.729 -2.303 -8.888 1.00 13.73 ? 6 SER A CA 1
ATOM 37 C C . SER A 1 6 ? 0.736 -1.777 -9.914 1.00 25.79 ? 6 SER A C 1
ATOM 38 O O . SER A 1 6 ? -0.436 -2.177 -9.935 1.00 25.59 ? 6 SER A O 1
ATOM 39 C CB . SER A 1 6 ? 2.738 -3.195 -9.599 1.00 21.17 ? 6 SER A CB 1
ATOM 40 O OG . SER A 1 6 ? 2.067 -4.240 -10.290 1.00 16.65 ? 6 SER A OG 1
ATOM 41 O OXT . SER A 1 6 ? 1.097 -0.949 -10.756 1.00 27.36 ? 6 SER A OXT 1
ATOM 42 N N . LYS B 1 1 ? -0.210 -7.416 -12.698 1.00 24.52 ? 1 LYS B N 1
ATOM 43 C CA . LYS B 1 1 ? 0.198 -6.639 -11.533 1.00 20.45 ? 1 LYS B CA 1
ATOM 44 C C . LYS B 1 1 ? 0.899 -7.495 -10.482 1.00 16.45 ? 1 LYS B C 1
ATOM 45 O O . LYS B 1 1 ? 0.598 -8.679 -10.298 1.00 13.66 ? 1 LYS B O 1
ATOM 46 C CB . LYS B 1 1 ? -1.008 -5.925 -10.906 1.00 20.80 ? 1 LYS B CB 1
ATOM 47 C CG . LYS B 1 1 ? -1.573 -4.799 -11.763 1.00 21.08 ? 1 LYS B CG 1
ATOM 48 C CD . LYS B 1 1 ? -3.086 -4.852 -11.764 1.00 27.82 ? 1 LYS B CD 1
ATOM 49 C CE . LYS B 1 1 ? -3.672 -4.078 -12.936 1.00 26.96 ? 1 LYS B CE 1
ATOM 50 N NZ . LYS B 1 1 ? -5.168 -4.205 -12.999 1.00 27.70 ? 1 LYS B NZ 1
ATOM 51 N N . ALA B 1 2 ? 1.848 -6.881 -9.793 1.00 11.76 ? 2 ALA B N 1
ATOM 52 C CA . ALA B 1 2 ? 2.472 -7.523 -8.662 1.00 13.31 ? 2 ALA B CA 1
ATOM 53 C C . ALA B 1 2 ? 1.705 -7.068 -7.431 1.00 10.24 ? 2 ALA B C 1
ATOM 54 O O . ALA B 1 2 ? 1.106 -5.984 -7.427 1.00 8.15 ? 2 ALA B O 1
ATOM 55 C CB . ALA B 1 2 ? 3.929 -7.124 -8.567 1.00 11.54 ? 2 ALA B CB 1
ATOM 56 N N . LEU B 1 3 ? 1.714 -7.894 -6.392 1.00 7.82 ? 3 LEU B N 1
ATOM 57 C CA . LEU B 1 3 ? 0.989 -7.579 -5.170 1.00 7.31 ? 3 LEU B CA 1
ATOM 58 C C . LEU B 1 3 ? 1.751 -8.077 -3.955 1.00 7.06 ? 3 LEU B C 1
ATOM 59 O O . LEU B 1 3 ? 2.228 -9.219 -3.931 1.00 8.25 ? 3 LEU B O 1
ATOM 60 C CB . LEU B 1 3 ? -0.427 -8.183 -5.208 1.00 7.02 ? 3 LEU B CB 1
ATOM 61 C CG . LEU B 1 3 ? -1.349 -7.980 -4.000 1.00 6.55 ? 3 LEU B CG 1
ATOM 62 C CD1 . LEU B 1 3 ? -2.799 -7.981 -4.467 1.00 11.85 ? 3 LEU B CD1 1
ATOM 63 C CD2 . LEU B 1 3 ? -1.145 -9.038 -2.912 1.00 8.23 ? 3 LEU B CD2 1
ATOM 64 N N . GLY B 1 4 ? 1.837 -7.236 -2.928 1.00 6.13 ? 4 GLY B N 1
ATOM 65 C CA . GLY B 1 4 ? 2.481 -7.631 -1.700 1.00 7.07 ? 4 GLY B CA 1
ATOM 66 C C . GLY B 1 4 ? 1.659 -7.197 -0.506 1.00 7.85 ? 4 GLY B C 1
ATOM 67 O O . GLY B 1 4 ? 1.007 -6.142 -0.534 1.00 7.24 ? 4 GLY B O 1
ATOM 68 N N . ILE B 1 5 ? 1.667 -8.029 0.529 1.00 6.49 ? 5 ILE B N 1
ATOM 69 C CA . ILE B 1 5 ? 1.090 -7.680 1.814 1.00 7.23 ? 5 ILE B CA 1
ATOM 70 C C . ILE B 1 5 ? 2.139 -7.983 2.885 1.00 8.16 ? 5 ILE B C 1
ATOM 71 O O . ILE B 1 5 ? 2.632 -9.121 2.988 1.00 7.33 ? 5 ILE B O 1
ATOM 72 C CB . ILE B 1 5 ? -0.198 -8.487 2.091 1.00 7.24 ? 5 ILE B CB 1
ATOM 73 C CG1 . ILE B 1 5 ? -1.239 -8.201 1.003 1.00 8.62 ? 5 ILE B CG1 1
ATOM 74 C CG2 . ILE B 1 5 ? -0.727 -8.174 3.496 1.00 9.75 ? 5 ILE B CG2 1
ATOM 75 C CD1 . ILE B 1 5 ? -2.532 -8.986 1.155 1.00 11.45 ? 5 ILE B CD1 1
ATOM 76 N N . SER B 1 6 ? 2.486 -6.977 3.687 1.00 8.47 ? 6 SER B N 1
ATOM 77 C CA . SER B 1 6 ? 3.613 -7.105 4.606 1.00 11.06 ? 6 SER B CA 1
ATOM 78 C C . SER B 1 6 ? 3.266 -8.004 5.776 1.00 16.06 ? 6 SER B C 1
ATOM 79 O O . SER B 1 6 ? 2.098 -8.364 5.990 1.00 12.43 ? 6 SER B O 1
ATOM 80 C CB . SER B 1 6 ? 4.075 -5.733 5.116 1.00 11.00 ? 6 SER B CB 1
ATOM 81 O OG . SER B 1 6 ? 3.113 -5.168 5.993 1.00 13.17 ? 6 SER B OG 1
ATOM 82 O OXT . SER B 1 6 ? 4.173 -8.385 6.526 1.00 18.02 ? 6 SER B OXT 1
HETATM 83 S S . SO4 C 2 . ? 3.998 -9.986 9.518 1.00 27.01 ? 101 SO4 A S 1
HETATM 84 O O1 . SO4 C 2 . ? 3.337 -8.700 9.294 1.00 24.86 ? 101 SO4 A O1 1
HETATM 85 O O2 . SO4 C 2 . ? 4.420 -10.561 8.243 1.00 26.28 ? 101 SO4 A O2 1
HETATM 86 O O3 . SO4 C 2 . ? 3.050 -10.885 10.180 1.00 28.63 ? 101 SO4 A O3 1
HETATM 87 O O4 . SO4 C 2 . ? 5.175 -9.795 10.368 1.00 28.59 ? 101 SO4 A O4 1
HETATM 88 C C1 . GOL D 3 . ? 4.051 -5.558 9.753 1.00 22.71 ? 101 GOL B C1 1
HETATM 89 O O1 . GOL D 3 . ? 4.124 -4.880 8.521 1.00 24.13 ? 101 GOL B O1 1
HETATM 90 C C2 . GOL D 3 . ? 3.935 -4.501 10.836 1.00 25.52 ? 101 GOL B C2 1
HETATM 91 O O2 . GOL D 3 . ? 3.268 -3.373 10.299 1.00 32.44 ? 101 GOL B O2 1
HETATM 92 C C3 . GOL D 3 . ? 5.334 -4.102 11.282 1.00 28.38 ? 101 GOL B C3 1
HETATM 93 O O3 . GOL D 3 . ? 5.305 -2.812 11.860 1.00 30.45 ? 101 GOL B O3 1
HETATM 94 O O . HOH E 4 . ? 2.706 0.007 -12.168 1.00 27.26 ? 201 HOH A O 1
HETATM 95 O O . HOH E 4 . ? 0.531 -5.773 10.981 1.00 25.98 ? 202 HOH A O 1
#