data_6C3F
#
_entry.id 6C3F
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.387
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 6C3F pdb_00006c3f 10.2210/pdb6c3f/pdb
WWPDB D_1000231996 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2018-04-18
2 'Structure model' 1 1 2018-07-18
3 'Structure model' 1 2 2018-08-01
4 'Structure model' 1 3 2024-03-13
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Data collection'
2 2 'Structure model' 'Database references'
3 3 'Structure model' 'Data collection'
4 3 'Structure model' 'Database references'
5 4 'Structure model' 'Data collection'
6 4 'Structure model' 'Database references'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 2 'Structure model' citation
2 3 'Structure model' citation
3 3 'Structure model' citation_author
4 3 'Structure model' pdbx_related_exp_data_set
5 4 'Structure model' chem_comp_atom
6 4 'Structure model' chem_comp_bond
7 4 'Structure model' database_2
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 2 'Structure model' '_citation.journal_volume'
2 2 'Structure model' '_citation.page_first'
3 2 'Structure model' '_citation.page_last'
4 2 'Structure model' '_citation.title'
5 4 'Structure model' '_database_2.pdbx_DOI'
6 4 'Structure model' '_database_2.pdbx_database_accession'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.entry_id 6C3F
_pdbx_database_status.recvd_initial_deposition_date 2018-01-09
_pdbx_database_status.SG_entry N
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_nmr_data ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
_audit_author.identifier_ORCID
'Saelices, L.' 1 0000-0002-1904-2150
'Sawaya, M.R.' 2 0000-0003-0874-9043
'Eisenberg, D.S.' 3 0000-0003-2432-5419
#
loop_
_citation.abstract
_citation.abstract_id_CAS
_citation.book_id_ISBN
_citation.book_publisher
_citation.book_publisher_city
_citation.book_title
_citation.coordinate_linkage
_citation.country
_citation.database_id_Medline
_citation.details
_citation.id
_citation.journal_abbrev
_citation.journal_id_ASTM
_citation.journal_id_CSD
_citation.journal_id_ISSN
_citation.journal_full
_citation.journal_issue
_citation.journal_volume
_citation.language
_citation.page_first
_citation.page_last
_citation.title
_citation.year
_citation.database_id_CSD
_citation.pdbx_database_id_DOI
_citation.pdbx_database_id_PubMed
_citation.unpublished_flag
? ? ? ? ? ? ? US ? ? primary 'Protein Sci.' PRCIEI 0795 1469-896X ? ? 27 ? 1295 1303
'Crystal structures of amyloidogenic segments of human transthyretin.' 2018 ? 10.1002/pro.3420 29626847 ?
? ? ? ? ? ? ? US ? ? 1 'J. Biol. Chem.' JBCHA3 0071 1083-351X ? ? 290 ? 28932 28943
'Uncovering the Mechanism of Aggregation of Human Transthyretin.' 2015 ? 10.1074/jbc.M115.659912 26459562 ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Saelices, L.' 1 ?
primary 'Sievers, S.A.' 2 ?
primary 'Sawaya, M.R.' 3 ?
primary 'Eisenberg, D.S.' 4 ?
1 'Saelices, L.' 5 ?
1 'Johnson, L.M.' 6 ?
1 'Liang, W.Y.' 7 ?
1 'Sawaya, M.R.' 8 ?
1 'Cascio, D.' 9 ?
1 'Ruchala, P.' 10 ?
1 'Whitelegge, J.' 11 ?
1 'Jiang, L.' 12 ?
1 'Riek, R.' 13 ?
1 'Eisenberg, D.S.' 14 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn ILE-TYR-LYS-VAL-GLU-ILE 764.929 2 ? ? ? ?
2 non-polymer syn 'trifluoroacetic acid' 114.023 1 ? ? ? ?
3 water nat water 18.015 4 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code IYKVEI
_entity_poly.pdbx_seq_one_letter_code_can IYKVEI
_entity_poly.pdbx_strand_id A,B
_entity_poly.pdbx_target_identifier ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2 'trifluoroacetic acid' TFA
3 water HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 ILE n
1 2 TYR n
1 3 LYS n
1 4 VAL n
1 5 GLU n
1 6 ILE n
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num 1
_pdbx_entity_src_syn.pdbx_end_seq_num 6
_pdbx_entity_src_syn.organism_scientific 'Homo sapiens'
_pdbx_entity_src_syn.organism_common_name ?
_pdbx_entity_src_syn.ncbi_taxonomy_id 9606
_pdbx_entity_src_syn.details ?
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129
HOH non-polymer . WATER ? 'H2 O' 18.015
ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173
LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195
TFA non-polymer . 'trifluoroacetic acid' ? 'C2 H F3 O2' 114.023
TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189
VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 ILE 1 1 1 ILE ILE A . n
A 1 2 TYR 2 2 2 TYR TYR A . n
A 1 3 LYS 3 3 3 LYS LYS A . n
A 1 4 VAL 4 4 4 VAL VAL A . n
A 1 5 GLU 5 5 5 GLU GLU A . n
A 1 6 ILE 6 6 6 ILE ILE A . n
B 1 1 ILE 1 1 1 ILE ILE B . n
B 1 2 TYR 2 2 2 TYR TYR B . n
B 1 3 LYS 3 3 3 LYS LYS B . n
B 1 4 VAL 4 4 4 VAL VAL B . n
B 1 5 GLU 5 5 5 GLU GLU B . n
B 1 6 ILE 6 6 6 ILE ILE B . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 TFA 1 101 1 TFA TFA A .
D 3 HOH 1 201 1 HOH HOH A .
E 3 HOH 1 101 4 HOH HOH B .
E 3 HOH 2 102 3 HOH HOH B .
E 3 HOH 3 103 5 HOH HOH B .
#
loop_
_software.citation_id
_software.classification
_software.compiler_name
_software.compiler_version
_software.contact_author
_software.contact_author_email
_software.date
_software.description
_software.dependencies
_software.hardware
_software.language
_software.location
_software.mods
_software.name
_software.os
_software.os_version
_software.type
_software.version
_software.pdbx_ordinal
? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 1
? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? dev_1555 2
? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.24 3
? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4
? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 5
#
_cell.angle_alpha 90.000
_cell.angle_alpha_esd ?
_cell.angle_beta 95.660
_cell.angle_beta_esd ?
_cell.angle_gamma 90.000
_cell.angle_gamma_esd ?
_cell.entry_id 6C3F
_cell.details ?
_cell.formula_units_Z ?
_cell.length_a 9.600
_cell.length_a_esd ?
_cell.length_b 29.450
_cell.length_b_esd ?
_cell.length_c 16.030
_cell.length_c_esd ?
_cell.volume ?
_cell.volume_esd ?
_cell.Z_PDB 4
_cell.reciprocal_angle_alpha ?
_cell.reciprocal_angle_beta ?
_cell.reciprocal_angle_gamma ?
_cell.reciprocal_angle_alpha_esd ?
_cell.reciprocal_angle_beta_esd ?
_cell.reciprocal_angle_gamma_esd ?
_cell.reciprocal_length_a ?
_cell.reciprocal_length_b ?
_cell.reciprocal_length_c ?
_cell.reciprocal_length_a_esd ?
_cell.reciprocal_length_b_esd ?
_cell.reciprocal_length_c_esd ?
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 6C3F
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 4
_symmetry.space_group_name_Hall ?
_symmetry.space_group_name_H-M 'P 1 21 1'
_symmetry.pdbx_full_space_group_name_H-M ?
#
_exptl.absorpt_coefficient_mu ?
_exptl.absorpt_correction_T_max ?
_exptl.absorpt_correction_T_min ?
_exptl.absorpt_correction_type ?
_exptl.absorpt_process_details ?
_exptl.entry_id 6C3F
_exptl.crystals_number 1
_exptl.details ?
_exptl.method 'X-RAY DIFFRACTION'
_exptl.method_details ?
#
_exptl_crystal.colour ?
_exptl_crystal.density_diffrn ?
_exptl_crystal.density_Matthews 1.47
_exptl_crystal.density_method ?
_exptl_crystal.density_percent_sol 16.55
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.id 1
_exptl_crystal.preparation ?
_exptl_crystal.size_max ?
_exptl_crystal.size_mid ?
_exptl_crystal.size_min ?
_exptl_crystal.size_rad ?
_exptl_crystal.colour_lustre ?
_exptl_crystal.colour_modifier ?
_exptl_crystal.colour_primary ?
_exptl_crystal.density_meas ?
_exptl_crystal.density_meas_esd ?
_exptl_crystal.density_meas_gt ?
_exptl_crystal.density_meas_lt ?
_exptl_crystal.density_meas_temp ?
_exptl_crystal.density_meas_temp_esd ?
_exptl_crystal.density_meas_temp_gt ?
_exptl_crystal.density_meas_temp_lt ?
_exptl_crystal.pdbx_crystal_image_url ?
_exptl_crystal.pdbx_crystal_image_format ?
_exptl_crystal.pdbx_mosaicity ?
_exptl_crystal.pdbx_mosaicity_esd ?
#
_exptl_crystal_grow.apparatus ?
_exptl_crystal_grow.atmosphere ?
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.details ?
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.method_ref ?
_exptl_crystal_grow.pH ?
_exptl_crystal_grow.pressure ?
_exptl_crystal_grow.pressure_esd ?
_exptl_crystal_grow.seeding ?
_exptl_crystal_grow.seeding_ref ?
_exptl_crystal_grow.temp 298
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.temp_esd ?
_exptl_crystal_grow.time ?
_exptl_crystal_grow.pdbx_details '1.5 M NaCl, 10 % v/v ethanol, 25% Glycerol'
_exptl_crystal_grow.pdbx_pH_range ?
#
_diffrn.ambient_environment ?
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.ambient_temp_esd ?
_diffrn.crystal_id 1
_diffrn.crystal_support ?
_diffrn.crystal_treatment ?
_diffrn.details ?
_diffrn.id 1
_diffrn.ambient_pressure ?
_diffrn.ambient_pressure_esd ?
_diffrn.ambient_pressure_gt ?
_diffrn.ambient_pressure_lt ?
_diffrn.ambient_temp_gt ?
_diffrn.ambient_temp_lt ?
#
_diffrn_detector.details ?
_diffrn_detector.detector CCD
_diffrn_detector.diffrn_id 1
_diffrn_detector.type 'ADSC QUANTUM 315'
_diffrn_detector.area_resol_mean ?
_diffrn_detector.dtime ?
_diffrn_detector.pdbx_frames_total ?
_diffrn_detector.pdbx_collection_time_total ?
_diffrn_detector.pdbx_collection_date 2014-02-28
#
_diffrn_radiation.collimation ?
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.filter_edge ?
_diffrn_radiation.inhomogeneity ?
_diffrn_radiation.monochromator ?
_diffrn_radiation.polarisn_norm ?
_diffrn_radiation.polarisn_ratio ?
_diffrn_radiation.probe ?
_diffrn_radiation.type ?
_diffrn_radiation.xray_symbol ?
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.pdbx_wavelength_list ?
_diffrn_radiation.pdbx_wavelength ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_analyzer ?
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 0.9792
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.current ?
_diffrn_source.details ?
_diffrn_source.diffrn_id 1
_diffrn_source.power ?
_diffrn_source.size ?
_diffrn_source.source SYNCHROTRON
_diffrn_source.target ?
_diffrn_source.type 'APS BEAMLINE 24-ID-E'
_diffrn_source.voltage ?
_diffrn_source.take-off_angle ?
_diffrn_source.pdbx_wavelength_list 0.9792
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_synchrotron_beamline 24-ID-E
_diffrn_source.pdbx_synchrotron_site APS
#
_reflns.B_iso_Wilson_estimate 5.020
_reflns.entry_id 6C3F
_reflns.data_reduction_details ?
_reflns.data_reduction_method ?
_reflns.d_resolution_high 1.4990
_reflns.d_resolution_low 15.952
_reflns.details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.number_all ?
_reflns.number_obs 1413
_reflns.observed_criterion ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.observed_criterion_I_max ?
_reflns.observed_criterion_I_min ?
_reflns.observed_criterion_sigma_F ?
_reflns.observed_criterion_sigma_I ?
_reflns.percent_possible_obs 96.300
_reflns.R_free_details ?
_reflns.Rmerge_F_all ?
_reflns.Rmerge_F_obs ?
_reflns.Friedel_coverage ?
_reflns.number_gt ?
_reflns.threshold_expression ?
_reflns.pdbx_redundancy 2.735
_reflns.pdbx_Rmerge_I_obs 0.154
_reflns.pdbx_Rmerge_I_all ?
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_av_sigmaI ?
_reflns.pdbx_netI_over_sigmaI 5.060
_reflns.pdbx_res_netI_over_av_sigmaI_2 ?
_reflns.pdbx_res_netI_over_sigmaI_2 ?
_reflns.pdbx_chi_squared 0.974
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_d_res_high_opt ?
_reflns.pdbx_d_res_low_opt ?
_reflns.pdbx_d_res_opt_method ?
_reflns.phase_calculation_details ?
_reflns.pdbx_Rrim_I_all 0.188
_reflns.pdbx_Rpim_I_all ?
_reflns.pdbx_d_opt ?
_reflns.pdbx_number_measured_all ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
_reflns.pdbx_CC_half 0.989
_reflns.pdbx_R_split ?
#
loop_
_reflns_shell.d_res_high
_reflns_shell.d_res_low
_reflns_shell.meanI_over_sigI_all
_reflns_shell.meanI_over_sigI_obs
_reflns_shell.number_measured_all
_reflns_shell.number_measured_obs
_reflns_shell.number_possible
_reflns_shell.number_unique_all
_reflns_shell.number_unique_obs
_reflns_shell.percent_possible_all
_reflns_shell.percent_possible_obs
_reflns_shell.Rmerge_F_all
_reflns_shell.Rmerge_F_obs
_reflns_shell.Rmerge_I_all
_reflns_shell.Rmerge_I_obs
_reflns_shell.meanI_over_sigI_gt
_reflns_shell.meanI_over_uI_all
_reflns_shell.meanI_over_uI_gt
_reflns_shell.number_measured_gt
_reflns_shell.number_unique_gt
_reflns_shell.percent_possible_gt
_reflns_shell.Rmerge_F_gt
_reflns_shell.Rmerge_I_gt
_reflns_shell.pdbx_redundancy
_reflns_shell.pdbx_Rsym_value
_reflns_shell.pdbx_chi_squared
_reflns_shell.pdbx_netI_over_sigmaI_all
_reflns_shell.pdbx_netI_over_sigmaI_obs
_reflns_shell.pdbx_Rrim_I_all
_reflns_shell.pdbx_Rpim_I_all
_reflns_shell.pdbx_rejects
_reflns_shell.pdbx_ordinal
_reflns_shell.pdbx_diffrn_id
_reflns_shell.pdbx_CC_half
_reflns_shell.pdbx_R_split
1.500 1.560 ? 2.080 ? ? ? ? 145 96.700 ? ? ? ? 0.517 ? ? ? ? ? ? ? ? 2.676 ? ? ? ? 0.634 ? ? 1 1 0.765 ?
1.560 1.620 ? 2.930 ? ? ? ? 155 95.100 ? ? ? ? 0.357 ? ? ? ? ? ? ? ? 2.787 ? ? ? ? 0.438 ? ? 2 1 0.871 ?
1.620 1.690 ? 2.610 ? ? ? ? 110 95.700 ? ? ? ? 0.456 ? ? ? ? ? ? ? ? 2.709 ? ? ? ? 0.557 ? ? 3 1 0.800 ?
1.690 1.770 ? 2.770 ? ? ? ? 142 97.300 ? ? ? ? 0.390 ? ? ? ? ? ? ? ? 2.782 ? ? ? ? 0.475 ? ? 4 1 0.858 ?
1.770 1.870 ? 3.330 ? ? ? ? 126 97.700 ? ? ? ? 0.316 ? ? ? ? ? ? ? ? 2.698 ? ? ? ? 0.390 ? ? 5 1 0.919 ?
1.870 1.980 ? 4.570 ? ? ? ? 126 97.700 ? ? ? ? 0.208 ? ? ? ? ? ? ? ? 2.722 ? ? ? ? 0.254 ? ? 6 1 0.931 ?
1.980 2.120 ? 6.290 ? ? ? ? 96 99.000 ? ? ? ? 0.168 ? ? ? ? ? ? ? ? 2.750 ? ? ? ? 0.205 ? ? 7 1 0.956 ?
2.120 2.290 ? 6.380 ? ? ? ? 115 98.300 ? ? ? ? 0.157 ? ? ? ? ? ? ? ? 2.748 ? ? ? ? 0.192 ? ? 8 1 0.959 ?
2.290 2.510 ? 6.650 ? ? ? ? 96 99.000 ? ? ? ? 0.143 ? ? ? ? ? ? ? ? 2.708 ? ? ? ? 0.174 ? ? 9 1 0.985 ?
2.510 2.800 ? 7.840 ? ? ? ? 79 92.900 ? ? ? ? 0.099 ? ? ? ? ? ? ? ? 2.861 ? ? ? ? 0.124 ? ? 10 1 0.995 ?
2.800 3.240 ? 8.640 ? ? ? ? 88 96.700 ? ? ? ? 0.091 ? ? ? ? ? ? ? ? 2.705 ? ? ? ? 0.109 ? ? 11 1 0.990 ?
3.240 3.970 ? 10.470 ? ? ? ? 58 93.500 ? ? ? ? 0.070 ? ? ? ? ? ? ? ? 2.638 ? ? ? ? 0.086 ? ? 12 1 0.992 ?
3.970 5.610 ? 10.830 ? ? ? ? 52 96.300 ? ? ? ? 0.067 ? ? ? ? ? ? ? ? 2.750 ? ? ? ? 0.082 ? ? 13 1 0.993 ?
5.610 15.952 ? 7.940 ? ? ? ? 25 78.100 ? ? ? ? 0.078 ? ? ? ? ? ? ? ? 2.760 ? ? ? ? 0.096 ? ? 14 1 0.998 ?
#
_refine.aniso_B[1][1] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[2][3] ?
_refine.aniso_B[3][3] ?
_refine.B_iso_max 17.890
_refine.B_iso_mean 8.1200
_refine.B_iso_min 2.210
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.details ?
_refine.diff_density_max ?
_refine.diff_density_max_esd ?
_refine.diff_density_min ?
_refine.diff_density_min_esd ?
_refine.diff_density_rms ?
_refine.diff_density_rms_esd ?
_refine.entry_id 6C3F
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.ls_abs_structure_details ?
_refine.ls_abs_structure_Flack ?
_refine.ls_abs_structure_Flack_esd ?
_refine.ls_abs_structure_Rogers ?
_refine.ls_abs_structure_Rogers_esd ?
_refine.ls_d_res_high 1.4990
_refine.ls_d_res_low 15.9520
_refine.ls_extinction_coef ?
_refine.ls_extinction_coef_esd ?
_refine.ls_extinction_expression ?
_refine.ls_extinction_method ?
_refine.ls_goodness_of_fit_all ?
_refine.ls_goodness_of_fit_all_esd ?
_refine.ls_goodness_of_fit_obs ?
_refine.ls_goodness_of_fit_obs_esd ?
_refine.ls_hydrogen_treatment ?
_refine.ls_matrix_type ?
_refine.ls_number_constraints ?
_refine.ls_number_parameters ?
_refine.ls_number_reflns_all ?
_refine.ls_number_reflns_obs 1400
_refine.ls_number_reflns_R_free 141
_refine.ls_number_reflns_R_work ?
_refine.ls_number_restraints ?
_refine.ls_percent_reflns_obs 96.0200
_refine.ls_percent_reflns_R_free 10.0700
_refine.ls_R_factor_all ?
_refine.ls_R_factor_obs 0.2109
_refine.ls_R_factor_R_free 0.2624
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_R_factor_R_work 0.2050
_refine.ls_R_Fsqd_factor_obs ?
_refine.ls_R_I_factor_obs ?
_refine.ls_redundancy_reflns_all ?
_refine.ls_redundancy_reflns_obs ?
_refine.ls_restrained_S_all ?
_refine.ls_restrained_S_obs ?
_refine.ls_shift_over_esd_max ?
_refine.ls_shift_over_esd_mean ?
_refine.ls_structure_factor_coef ?
_refine.ls_weighting_details ?
_refine.ls_weighting_scheme ?
_refine.ls_wR_factor_all ?
_refine.ls_wR_factor_obs ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.occupancy_max ?
_refine.occupancy_min ?
_refine.solvent_model_details ?
_refine.solvent_model_param_bsol ?
_refine.solvent_model_param_ksol ?
_refine.ls_R_factor_gt ?
_refine.ls_goodness_of_fit_gt ?
_refine.ls_goodness_of_fit_ref ?
_refine.ls_shift_over_su_max ?
_refine.ls_shift_over_su_max_lt ?
_refine.ls_shift_over_su_mean ?
_refine.ls_shift_over_su_mean_lt ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 1.390
_refine.pdbx_ls_sigma_Fsqd ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_starting_model ?
_refine.pdbx_stereochemistry_target_values ?
_refine.pdbx_R_Free_selection_details ?
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.pdbx_solvent_vdw_probe_radii 1.1100
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii 0.9000
_refine.pdbx_real_space_R ?
_refine.pdbx_density_correlation ?
_refine.pdbx_pd_number_of_powder_patterns ?
_refine.pdbx_pd_number_of_points ?
_refine.pdbx_pd_meas_number_of_points ?
_refine.pdbx_pd_proc_ls_prof_R_factor ?
_refine.pdbx_pd_proc_ls_prof_wR_factor ?
_refine.pdbx_pd_Marquardt_correlation_coeff ?
_refine.pdbx_pd_Fsqrd_R_factor ?
_refine.pdbx_pd_ls_matrix_band_width ?
_refine.pdbx_overall_phase_error 28.8600
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_diffrn_id 1
_refine.overall_SU_B ?
_refine.overall_SU_ML 0.1100
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_average_fsc_overall ?
_refine.pdbx_average_fsc_work ?
_refine.pdbx_average_fsc_free ?
#
_refine_hist.cycle_id final
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.d_res_high 1.4990
_refine_hist.d_res_low 15.9520
_refine_hist.pdbx_number_atoms_ligand 7
_refine_hist.number_atoms_solvent 4
_refine_hist.number_atoms_total 119
_refine_hist.pdbx_number_residues_total 12
_refine_hist.pdbx_B_iso_mean_ligand 14.31
_refine_hist.pdbx_B_iso_mean_solvent 14.63
_refine_hist.pdbx_number_atoms_protein 108
_refine_hist.pdbx_number_atoms_nucleic_acid 0
#
loop_
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.criterion
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.number
_refine_ls_restr.rejects
_refine_ls_restr.type
_refine_ls_restr.weight
_refine_ls_restr.pdbx_restraint_function
'X-RAY DIFFRACTION' ? 0.008 ? 114 ? f_bond_d ? ?
'X-RAY DIFFRACTION' ? 1.144 ? 153 ? f_angle_d ? ?
'X-RAY DIFFRACTION' ? 0.048 ? 18 ? f_chiral_restr ? ?
'X-RAY DIFFRACTION' ? 0.004 ? 17 ? f_plane_restr ? ?
'X-RAY DIFFRACTION' ? 15.554 ? 43 ? f_dihedral_angle_d ? ?
#
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_ls_shell.d_res_high 1.4991
_refine_ls_shell.d_res_low 1.553
_refine_ls_shell.number_reflns_all ?
_refine_ls_shell.number_reflns_obs 133
_refine_ls_shell.number_reflns_R_free ?
_refine_ls_shell.number_reflns_R_work ?
_refine_ls_shell.percent_reflns_obs 95.0000
_refine_ls_shell.percent_reflns_R_free 10
_refine_ls_shell.R_factor_all ?
_refine_ls_shell.R_factor_obs ?
_refine_ls_shell.R_factor_R_free 0.2423
_refine_ls_shell.R_factor_R_free_error 0.0000
_refine_ls_shell.R_factor_R_work 0.3093
_refine_ls_shell.redundancy_reflns_all ?
_refine_ls_shell.redundancy_reflns_obs ?
_refine_ls_shell.wR_factor_all ?
_refine_ls_shell.wR_factor_obs ?
_refine_ls_shell.wR_factor_R_free ?
_refine_ls_shell.wR_factor_R_work ?
_refine_ls_shell.pdbx_total_number_of_bins_used 1
_refine_ls_shell.pdbx_phase_error ?
_refine_ls_shell.pdbx_fsc_work ?
_refine_ls_shell.pdbx_fsc_free ?
#
_struct.entry_id 6C3F
_struct.title 'AMYLOID FORMING PEPTIDE IYKVEI FROM TRANSTHYRETIN'
_struct.pdbx_model_details ?
_struct.pdbx_formula_weight ?
_struct.pdbx_formula_weight_method ?
_struct.pdbx_model_type_details ?
_struct.pdbx_CASP_flag N
#
_struct_keywords.entry_id 6C3F
_struct_keywords.text 'amyloid, transthyretin, fibril, PROTEIN FIBRIL'
_struct_keywords.pdbx_keywords 'PROTEIN FIBRIL'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 1 ?
C N N 2 ?
D N N 3 ?
E N N 3 ?
#
_struct_ref.id 1
_struct_ref.db_name PDB
_struct_ref.db_code 6C3F
_struct_ref.pdbx_db_accession 6C3F
_struct_ref.pdbx_db_isoform ?
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_align_begin 1
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.pdbx_PDB_id_code
_struct_ref_seq.pdbx_strand_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.pdbx_seq_align_beg_ins_code
_struct_ref_seq.seq_align_end
_struct_ref_seq.pdbx_seq_align_end_ins_code
_struct_ref_seq.pdbx_db_accession
_struct_ref_seq.db_align_beg
_struct_ref_seq.pdbx_db_align_beg_ins_code
_struct_ref_seq.db_align_end
_struct_ref_seq.pdbx_db_align_end_ins_code
_struct_ref_seq.pdbx_auth_seq_align_beg
_struct_ref_seq.pdbx_auth_seq_align_end
1 1 6C3F A 1 ? 6 ? 6C3F 1 ? 6 ? 1 6
2 1 6C3F B 1 ? 6 ? 6C3F 1 ? 6 ? 1 6
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details eicosameric
_pdbx_struct_assembly.oligomeric_count 20
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8,9,10
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E
#
_pdbx_struct_assembly_auth_evidence.id 1
_pdbx_struct_assembly_auth_evidence.assembly_id 1
_pdbx_struct_assembly_auth_evidence.experimental_support 'scanning transmission electron microscopy'
_pdbx_struct_assembly_auth_evidence.details ?
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 1_455 x-1,y,z 1.0000000000 0.0000000000 0.0000000000 -9.6000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
3 'crystal symmetry operation' 1_655 x+1,y,z 1.0000000000 0.0000000000 0.0000000000 9.6000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
4 'crystal symmetry operation' 1_355 x-2,y,z 1.0000000000 0.0000000000 0.0000000000 -19.2000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
5 'crystal symmetry operation' 1_755 x+2,y,z 1.0000000000 0.0000000000 0.0000000000 19.2000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
6 'crystal symmetry operation' 1_556 x,y,z+1 1.0000000000 0.0000000000 0.0000000000 -1.5809594835 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 15.9518483917
7 'crystal symmetry operation' 1_456 x-1,y,z+1 1.0000000000 0.0000000000 0.0000000000 -11.1809594835 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 15.9518483917
8 'crystal symmetry operation' 1_656 x+1,y,z+1 1.0000000000 0.0000000000 0.0000000000 8.0190405165 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 15.9518483917
9 'crystal symmetry operation' 1_356 x-2,y,z+1 1.0000000000 0.0000000000 0.0000000000 -20.7809594835 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 15.9518483917
10 'crystal symmetry operation' 1_756 x+2,y,z+1 1.0000000000 0.0000000000 0.0000000000 17.6190405165 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 15.9518483917
#
_struct_sheet.id AA1
_struct_sheet.type ?
_struct_sheet.number_strands 2
_struct_sheet.details ?
#
_struct_sheet_order.sheet_id AA1
_struct_sheet_order.range_id_1 1
_struct_sheet_order.range_id_2 2
_struct_sheet_order.offset ?
_struct_sheet_order.sense anti-parallel
#
loop_
_struct_sheet_range.sheet_id
_struct_sheet_range.id
_struct_sheet_range.beg_label_comp_id
_struct_sheet_range.beg_label_asym_id
_struct_sheet_range.beg_label_seq_id
_struct_sheet_range.pdbx_beg_PDB_ins_code
_struct_sheet_range.end_label_comp_id
_struct_sheet_range.end_label_asym_id
_struct_sheet_range.end_label_seq_id
_struct_sheet_range.pdbx_end_PDB_ins_code
_struct_sheet_range.beg_auth_comp_id
_struct_sheet_range.beg_auth_asym_id
_struct_sheet_range.beg_auth_seq_id
_struct_sheet_range.end_auth_comp_id
_struct_sheet_range.end_auth_asym_id
_struct_sheet_range.end_auth_seq_id
AA1 1 TYR A 2 ? GLU A 5 ? TYR A 2 GLU A 5
AA1 2 TYR B 2 ? GLU B 5 ? TYR B 2 GLU B 5
#
_pdbx_struct_sheet_hbond.sheet_id AA1
_pdbx_struct_sheet_hbond.range_id_1 1
_pdbx_struct_sheet_hbond.range_id_2 2
_pdbx_struct_sheet_hbond.range_1_label_atom_id N
_pdbx_struct_sheet_hbond.range_1_label_comp_id TYR
_pdbx_struct_sheet_hbond.range_1_label_asym_id A
_pdbx_struct_sheet_hbond.range_1_label_seq_id 2
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code ?
_pdbx_struct_sheet_hbond.range_1_auth_atom_id N
_pdbx_struct_sheet_hbond.range_1_auth_comp_id TYR
_pdbx_struct_sheet_hbond.range_1_auth_asym_id A
_pdbx_struct_sheet_hbond.range_1_auth_seq_id 2
_pdbx_struct_sheet_hbond.range_2_label_atom_id O
_pdbx_struct_sheet_hbond.range_2_label_comp_id GLU
_pdbx_struct_sheet_hbond.range_2_label_asym_id B
_pdbx_struct_sheet_hbond.range_2_label_seq_id 5
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code ?
_pdbx_struct_sheet_hbond.range_2_auth_atom_id O
_pdbx_struct_sheet_hbond.range_2_auth_comp_id GLU
_pdbx_struct_sheet_hbond.range_2_auth_asym_id B
_pdbx_struct_sheet_hbond.range_2_auth_seq_id 5
#
_struct_site.id AC1
_struct_site.pdbx_evidence_code Software
_struct_site.pdbx_auth_asym_id A
_struct_site.pdbx_auth_comp_id TFA
_struct_site.pdbx_auth_seq_id 101
_struct_site.pdbx_auth_ins_code ?
_struct_site.pdbx_num_residues 5
_struct_site.details 'binding site for residue TFA A 101'
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 5 ILE A 1 ? ILE A 1 . ? 1_555 ?
2 AC1 5 TYR A 2 ? TYR A 2 . ? 1_556 ?
3 AC1 5 VAL A 4 ? VAL A 4 . ? 1_556 ?
4 AC1 5 LYS B 3 ? LYS B 3 . ? 1_656 ?
5 AC1 5 ILE B 6 ? ILE B 6 . ? 1_555 ?
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
GLU N N N N 1
GLU CA C N S 2
GLU C C N N 3
GLU O O N N 4
GLU CB C N N 5
GLU CG C N N 6
GLU CD C N N 7
GLU OE1 O N N 8
GLU OE2 O N N 9
GLU OXT O N N 10
GLU H H N N 11
GLU H2 H N N 12
GLU HA H N N 13
GLU HB2 H N N 14
GLU HB3 H N N 15
GLU HG2 H N N 16
GLU HG3 H N N 17
GLU HE2 H N N 18
GLU HXT H N N 19
HOH O O N N 20
HOH H1 H N N 21
HOH H2 H N N 22
ILE N N N N 23
ILE CA C N S 24
ILE C C N N 25
ILE O O N N 26
ILE CB C N S 27
ILE CG1 C N N 28
ILE CG2 C N N 29
ILE CD1 C N N 30
ILE OXT O N N 31
ILE H H N N 32
ILE H2 H N N 33
ILE HA H N N 34
ILE HB H N N 35
ILE HG12 H N N 36
ILE HG13 H N N 37
ILE HG21 H N N 38
ILE HG22 H N N 39
ILE HG23 H N N 40
ILE HD11 H N N 41
ILE HD12 H N N 42
ILE HD13 H N N 43
ILE HXT H N N 44
LYS N N N N 45
LYS CA C N S 46
LYS C C N N 47
LYS O O N N 48
LYS CB C N N 49
LYS CG C N N 50
LYS CD C N N 51
LYS CE C N N 52
LYS NZ N N N 53
LYS OXT O N N 54
LYS H H N N 55
LYS H2 H N N 56
LYS HA H N N 57
LYS HB2 H N N 58
LYS HB3 H N N 59
LYS HG2 H N N 60
LYS HG3 H N N 61
LYS HD2 H N N 62
LYS HD3 H N N 63
LYS HE2 H N N 64
LYS HE3 H N N 65
LYS HZ1 H N N 66
LYS HZ2 H N N 67
LYS HZ3 H N N 68
LYS HXT H N N 69
TFA C1 C N N 70
TFA C2 C N N 71
TFA O O N N 72
TFA F1 F N N 73
TFA F2 F N N 74
TFA F3 F N N 75
TFA OXT O N N 76
TFA HXT H N N 77
TYR N N N N 78
TYR CA C N S 79
TYR C C N N 80
TYR O O N N 81
TYR CB C N N 82
TYR CG C Y N 83
TYR CD1 C Y N 84
TYR CD2 C Y N 85
TYR CE1 C Y N 86
TYR CE2 C Y N 87
TYR CZ C Y N 88
TYR OH O N N 89
TYR OXT O N N 90
TYR H H N N 91
TYR H2 H N N 92
TYR HA H N N 93
TYR HB2 H N N 94
TYR HB3 H N N 95
TYR HD1 H N N 96
TYR HD2 H N N 97
TYR HE1 H N N 98
TYR HE2 H N N 99
TYR HH H N N 100
TYR HXT H N N 101
VAL N N N N 102
VAL CA C N S 103
VAL C C N N 104
VAL O O N N 105
VAL CB C N N 106
VAL CG1 C N N 107
VAL CG2 C N N 108
VAL OXT O N N 109
VAL H H N N 110
VAL H2 H N N 111
VAL HA H N N 112
VAL HB H N N 113
VAL HG11 H N N 114
VAL HG12 H N N 115
VAL HG13 H N N 116
VAL HG21 H N N 117
VAL HG22 H N N 118
VAL HG23 H N N 119
VAL HXT H N N 120
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
GLU N CA sing N N 1
GLU N H sing N N 2
GLU N H2 sing N N 3
GLU CA C sing N N 4
GLU CA CB sing N N 5
GLU CA HA sing N N 6
GLU C O doub N N 7
GLU C OXT sing N N 8
GLU CB CG sing N N 9
GLU CB HB2 sing N N 10
GLU CB HB3 sing N N 11
GLU CG CD sing N N 12
GLU CG HG2 sing N N 13
GLU CG HG3 sing N N 14
GLU CD OE1 doub N N 15
GLU CD OE2 sing N N 16
GLU OE2 HE2 sing N N 17
GLU OXT HXT sing N N 18
HOH O H1 sing N N 19
HOH O H2 sing N N 20
ILE N CA sing N N 21
ILE N H sing N N 22
ILE N H2 sing N N 23
ILE CA C sing N N 24
ILE CA CB sing N N 25
ILE CA HA sing N N 26
ILE C O doub N N 27
ILE C OXT sing N N 28
ILE CB CG1 sing N N 29
ILE CB CG2 sing N N 30
ILE CB HB sing N N 31
ILE CG1 CD1 sing N N 32
ILE CG1 HG12 sing N N 33
ILE CG1 HG13 sing N N 34
ILE CG2 HG21 sing N N 35
ILE CG2 HG22 sing N N 36
ILE CG2 HG23 sing N N 37
ILE CD1 HD11 sing N N 38
ILE CD1 HD12 sing N N 39
ILE CD1 HD13 sing N N 40
ILE OXT HXT sing N N 41
LYS N CA sing N N 42
LYS N H sing N N 43
LYS N H2 sing N N 44
LYS CA C sing N N 45
LYS CA CB sing N N 46
LYS CA HA sing N N 47
LYS C O doub N N 48
LYS C OXT sing N N 49
LYS CB CG sing N N 50
LYS CB HB2 sing N N 51
LYS CB HB3 sing N N 52
LYS CG CD sing N N 53
LYS CG HG2 sing N N 54
LYS CG HG3 sing N N 55
LYS CD CE sing N N 56
LYS CD HD2 sing N N 57
LYS CD HD3 sing N N 58
LYS CE NZ sing N N 59
LYS CE HE2 sing N N 60
LYS CE HE3 sing N N 61
LYS NZ HZ1 sing N N 62
LYS NZ HZ2 sing N N 63
LYS NZ HZ3 sing N N 64
LYS OXT HXT sing N N 65
TFA C1 C2 sing N N 66
TFA C1 O doub N N 67
TFA C1 OXT sing N N 68
TFA C2 F1 sing N N 69
TFA C2 F2 sing N N 70
TFA C2 F3 sing N N 71
TFA OXT HXT sing N N 72
TYR N CA sing N N 73
TYR N H sing N N 74
TYR N H2 sing N N 75
TYR CA C sing N N 76
TYR CA CB sing N N 77
TYR CA HA sing N N 78
TYR C O doub N N 79
TYR C OXT sing N N 80
TYR CB CG sing N N 81
TYR CB HB2 sing N N 82
TYR CB HB3 sing N N 83
TYR CG CD1 doub Y N 84
TYR CG CD2 sing Y N 85
TYR CD1 CE1 sing Y N 86
TYR CD1 HD1 sing N N 87
TYR CD2 CE2 doub Y N 88
TYR CD2 HD2 sing N N 89
TYR CE1 CZ doub Y N 90
TYR CE1 HE1 sing N N 91
TYR CE2 CZ sing Y N 92
TYR CE2 HE2 sing N N 93
TYR CZ OH sing N N 94
TYR OH HH sing N N 95
TYR OXT HXT sing N N 96
VAL N CA sing N N 97
VAL N H sing N N 98
VAL N H2 sing N N 99
VAL CA C sing N N 100
VAL CA CB sing N N 101
VAL CA HA sing N N 102
VAL C O doub N N 103
VAL C OXT sing N N 104
VAL CB CG1 sing N N 105
VAL CB CG2 sing N N 106
VAL CB HB sing N N 107
VAL CG1 HG11 sing N N 108
VAL CG1 HG12 sing N N 109
VAL CG1 HG13 sing N N 110
VAL CG2 HG21 sing N N 111
VAL CG2 HG22 sing N N 112
VAL CG2 HG23 sing N N 113
VAL OXT HXT sing N N 114
#
_pdbx_audit_support.funding_organization 'Seventh Framework Programme for Research'
_pdbx_audit_support.country 'United States'
_pdbx_audit_support.grant_number 298559
_pdbx_audit_support.ordinal 1
#
_atom_sites.entry_id 6C3F
_atom_sites.fract_transf_matrix[1][1] 0.104167
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.010331
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.033956
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.062689
_atom_sites.fract_transf_vector[1] 0.000000
_atom_sites.fract_transf_vector[2] 0.000000
_atom_sites.fract_transf_vector[3] 0.000000
#
loop_
_atom_type.symbol
C
F
N
O
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 N N . ILE A 1 1 ? 2.570 -5.985 11.153 1.00 14.05 ? 1 ILE A N 1
ATOM 2 C CA . ILE A 1 1 ? 2.464 -4.530 11.098 1.00 9.47 ? 1 ILE A CA 1
ATOM 3 C C . ILE A 1 1 ? 3.176 -3.959 9.887 1.00 6.97 ? 1 ILE A C 1
ATOM 4 O O . ILE A 1 1 ? 4.387 -4.078 9.785 1.00 7.07 ? 1 ILE A O 1
ATOM 5 C CB . ILE A 1 1 ? 3.075 -3.881 12.340 1.00 10.56 ? 1 ILE A CB 1
ATOM 6 C CG1 . ILE A 1 1 ? 2.570 -4.579 13.599 1.00 13.35 ? 1 ILE A CG1 1
ATOM 7 C CG2 . ILE A 1 1 ? 2.772 -2.410 12.359 1.00 6.80 ? 1 ILE A CG2 1
ATOM 8 C CD1 . ILE A 1 1 ? 3.682 -4.889 14.595 1.00 10.04 ? 1 ILE A CD1 1
ATOM 9 N N . TYR A 1 2 ? 2.447 -3.337 8.964 1.00 6.19 ? 2 TYR A N 1
ATOM 10 C CA . TYR A 1 2 ? 3.125 -2.732 7.826 1.00 5.09 ? 2 TYR A CA 1
ATOM 11 C C . TYR A 1 2 ? 2.317 -1.640 7.151 1.00 4.26 ? 2 TYR A C 1
ATOM 12 O O . TYR A 1 2 ? 1.093 -1.561 7.288 1.00 2.56 ? 2 TYR A O 1
ATOM 13 C CB . TYR A 1 2 ? 3.504 -3.802 6.791 1.00 7.09 ? 2 TYR A CB 1
ATOM 14 C CG . TYR A 1 2 ? 2.357 -4.494 6.074 1.00 5.83 ? 2 TYR A CG 1
ATOM 15 C CD1 . TYR A 1 2 ? 1.749 -3.920 4.959 1.00 7.67 ? 2 TYR A CD1 1
ATOM 16 C CD2 . TYR A 1 2 ? 1.919 -5.754 6.475 1.00 7.76 ? 2 TYR A CD2 1
ATOM 17 C CE1 . TYR A 1 2 ? 0.715 -4.562 4.293 1.00 8.20 ? 2 TYR A CE1 1
ATOM 18 C CE2 . TYR A 1 2 ? 0.876 -6.410 5.809 1.00 9.13 ? 2 TYR A CE2 1
ATOM 19 C CZ . TYR A 1 2 ? 0.284 -5.811 4.714 1.00 9.12 ? 2 TYR A CZ 1
ATOM 20 O OH . TYR A 1 2 ? -0.745 -6.446 4.040 1.00 12.08 ? 2 TYR A OH 1
ATOM 21 N N . LYS A 1 3 ? 3.032 -0.799 6.413 1.00 3.10 ? 3 LYS A N 1
ATOM 22 C CA . LYS A 1 3 ? 2.417 0.159 5.513 1.00 3.26 ? 3 LYS A CA 1
ATOM 23 C C . LYS A 1 3 ? 3.110 0.066 4.166 1.00 3.19 ? 3 LYS A C 1
ATOM 24 O O . LYS A 1 3 ? 4.332 0.005 4.091 1.00 3.06 ? 3 LYS A O 1
ATOM 25 C CB . LYS A 1 3 ? 2.503 1.587 6.057 1.00 4.47 ? 3 LYS A CB 1
ATOM 26 C CG . LYS A 1 3 ? 2.078 2.629 5.028 1.00 5.87 ? 3 LYS A CG 1
ATOM 27 C CD . LYS A 1 3 ? 1.983 4.005 5.648 1.00 7.44 ? 3 LYS A CD 1
ATOM 28 C CE . LYS A 1 3 ? 1.527 5.027 4.631 1.00 11.52 ? 3 LYS A CE 1
ATOM 29 N NZ . LYS A 1 3 ? 1.325 6.339 5.291 1.00 14.20 ? 3 LYS A NZ 1
ATOM 30 N N . VAL A 1 4 ? 2.316 0.023 3.108 1.00 3.16 ? 4 VAL A N 1
ATOM 31 C CA . VAL A 1 4 ? 2.814 0.039 1.742 1.00 3.52 ? 4 VAL A CA 1
ATOM 32 C C . VAL A 1 4 ? 2.145 1.190 0.992 1.00 4.13 ? 4 VAL A C 1
ATOM 33 O O . VAL A 1 4 ? 0.945 1.403 1.112 1.00 2.21 ? 4 VAL A O 1
ATOM 34 C CB . VAL A 1 4 ? 2.531 -1.293 1.023 1.00 5.72 ? 4 VAL A CB 1
ATOM 35 C CG1 . VAL A 1 4 ? 2.955 -1.230 -0.443 1.00 10.99 ? 4 VAL A CG1 1
ATOM 36 C CG2 . VAL A 1 4 ? 3.239 -2.409 1.731 1.00 9.57 ? 4 VAL A CG2 1
ATOM 37 N N . GLU A 1 5 ? 2.925 1.944 0.235 1.00 3.43 ? 5 GLU A N 1
ATOM 38 C CA . GLU A 1 5 ? 2.370 3.076 -0.483 1.00 5.03 ? 5 GLU A CA 1
ATOM 39 C C . GLU A 1 5 ? 3.070 3.285 -1.811 1.00 4.62 ? 5 GLU A C 1
ATOM 40 O O . GLU A 1 5 ? 4.300 3.243 -1.903 1.00 3.90 ? 5 GLU A O 1
ATOM 41 C CB . GLU A 1 5 ? 2.456 4.357 0.357 1.00 6.16 ? 5 GLU A CB 1
ATOM 42 C CG . GLU A 1 5 ? 2.023 5.605 -0.417 1.00 10.36 ? 5 GLU A CG 1
ATOM 43 C CD . GLU A 1 5 ? 1.822 6.813 0.479 1.00 14.05 ? 5 GLU A CD 1
ATOM 44 O OE1 . GLU A 1 5 ? 1.310 6.633 1.597 1.00 14.81 ? 5 GLU A OE1 1
ATOM 45 O OE2 . GLU A 1 5 ? 2.181 7.935 0.068 1.00 12.38 ? 5 GLU A OE2 1
ATOM 46 N N . ILE A 1 6 ? 2.273 3.494 -2.847 1.00 4.46 ? 6 ILE A N 1
ATOM 47 C CA . ILE A 1 6 ? 2.815 3.846 -4.145 1.00 7.54 ? 6 ILE A CA 1
ATOM 48 C C . ILE A 1 6 ? 2.380 5.260 -4.430 1.00 9.14 ? 6 ILE A C 1
ATOM 49 O O . ILE A 1 6 ? 1.177 5.531 -4.502 1.00 8.12 ? 6 ILE A O 1
ATOM 50 C CB . ILE A 1 6 ? 2.339 2.913 -5.267 1.00 6.32 ? 6 ILE A CB 1
ATOM 51 C CG1 . ILE A 1 6 ? 2.767 1.475 -4.973 1.00 6.52 ? 6 ILE A CG1 1
ATOM 52 C CG2 . ILE A 1 6 ? 2.889 3.392 -6.601 1.00 6.65 ? 6 ILE A CG2 1
ATOM 53 C CD1 . ILE A 1 6 ? 2.215 0.455 -5.950 1.00 6.36 ? 6 ILE A CD1 1
ATOM 54 O OXT . ILE A 1 6 ? 3.231 6.143 -4.560 1.00 11.60 ? 6 ILE A OXT 1
ATOM 55 N N . ILE B 1 1 ? -1.991 5.197 -4.033 1.00 6.97 ? 1 ILE B N 1
ATOM 56 C CA . ILE B 1 1 ? -2.566 3.953 -3.531 1.00 5.07 ? 1 ILE B CA 1
ATOM 57 C C . ILE B 1 1 ? -1.790 3.488 -2.297 1.00 4.56 ? 1 ILE B C 1
ATOM 58 O O . ILE B 1 1 ? -0.566 3.569 -2.262 1.00 5.42 ? 1 ILE B O 1
ATOM 59 C CB . ILE B 1 1 ? -2.569 2.857 -4.628 1.00 6.43 ? 1 ILE B CB 1
ATOM 60 C CG1 . ILE B 1 1 ? -3.082 1.517 -4.095 1.00 9.74 ? 1 ILE B CG1 1
ATOM 61 C CG2 . ILE B 1 1 ? -1.184 2.673 -5.229 1.00 7.33 ? 1 ILE B CG2 1
ATOM 62 C CD1 . ILE B 1 1 ? -3.230 0.452 -5.174 1.00 8.16 ? 1 ILE B CD1 1
ATOM 63 N N . TYR B 1 2 ? -2.492 3.026 -1.272 1.00 4.17 ? 2 TYR B N 1
ATOM 64 C CA . TYR B 1 2 ? -1.784 2.509 -0.108 1.00 4.60 ? 2 TYR B CA 1
ATOM 65 C C . TYR B 1 2 ? -2.575 1.505 0.684 1.00 3.55 ? 2 TYR B C 1
ATOM 66 O O . TYR B 1 2 ? -3.784 1.400 0.551 1.00 4.48 ? 2 TYR B O 1
ATOM 67 C CB . TYR B 1 2 ? -1.356 3.647 0.824 1.00 7.43 ? 2 TYR B CB 1
ATOM 68 C CG . TYR B 1 2 ? -2.470 4.376 1.553 1.00 8.52 ? 2 TYR B CG 1
ATOM 69 C CD1 . TYR B 1 2 ? -3.162 5.412 0.933 1.00 9.53 ? 2 TYR B CD1 1
ATOM 70 C CD2 . TYR B 1 2 ? -2.791 4.066 2.880 1.00 10.18 ? 2 TYR B CD2 1
ATOM 71 C CE1 . TYR B 1 2 ? -4.163 6.109 1.594 1.00 11.03 ? 2 TYR B CE1 1
ATOM 72 C CE2 . TYR B 1 2 ? -3.803 4.762 3.552 1.00 10.37 ? 2 TYR B CE2 1
ATOM 73 C CZ . TYR B 1 2 ? -4.480 5.785 2.893 1.00 13.21 ? 2 TYR B CZ 1
ATOM 74 O OH . TYR B 1 2 ? -5.483 6.501 3.518 1.00 15.83 ? 2 TYR B OH 1
ATOM 75 N N . LYS B 1 3 ? -1.857 0.761 1.509 1.00 3.71 ? 3 LYS B N 1
ATOM 76 C CA . LYS B 1 3 ? -2.457 -0.149 2.462 1.00 3.79 ? 3 LYS B CA 1
ATOM 77 C C . LYS B 1 3 ? -1.725 -0.026 3.789 1.00 3.14 ? 3 LYS B C 1
ATOM 78 O O . LYS B 1 3 ? -0.498 0.013 3.822 1.00 3.50 ? 3 LYS B O 1
ATOM 79 C CB . LYS B 1 3 ? -2.399 -1.582 1.951 1.00 4.56 ? 3 LYS B CB 1
ATOM 80 C CG . LYS B 1 3 ? -2.970 -2.598 2.912 1.00 6.85 ? 3 LYS B CG 1
ATOM 81 C CD . LYS B 1 3 ? -2.997 -3.995 2.296 1.00 6.82 ? 3 LYS B CD 1
ATOM 82 C CE . LYS B 1 3 ? -3.551 -5.008 3.290 1.00 10.43 ? 3 LYS B CE 1
ATOM 83 N NZ . LYS B 1 3 ? -3.590 -6.386 2.710 1.00 12.14 ? 3 LYS B NZ 1
ATOM 84 N N . VAL B 1 4 ? -2.476 0.059 4.878 1.00 3.09 ? 4 VAL B N 1
ATOM 85 C CA . VAL B 1 4 ? -1.895 -0.029 6.211 1.00 4.58 ? 4 VAL B CA 1
ATOM 86 C C . VAL B 1 4 ? -2.536 -1.184 6.953 1.00 4.44 ? 4 VAL B C 1
ATOM 87 O O . VAL B 1 4 ? -3.738 -1.395 6.861 1.00 3.57 ? 4 VAL B O 1
ATOM 88 C CB . VAL B 1 4 ? -2.078 1.273 7.017 1.00 4.81 ? 4 VAL B CB 1
ATOM 89 C CG1 . VAL B 1 4 ? -1.157 2.339 6.473 1.00 6.36 ? 4 VAL B CG1 1
ATOM 90 C CG2 . VAL B 1 4 ? -3.538 1.740 7.002 1.00 3.37 ? 4 VAL B CG2 1
ATOM 91 N N . GLU B 1 5 ? -1.743 -1.943 7.689 1.00 3.84 ? 5 GLU B N 1
ATOM 92 C CA . GLU B 1 5 ? -2.316 -3.072 8.395 1.00 5.03 ? 5 GLU B CA 1
ATOM 93 C C . GLU B 1 5 ? -1.670 -3.336 9.748 1.00 6.75 ? 5 GLU B C 1
ATOM 94 O O . GLU B 1 5 ? -0.448 -3.254 9.906 1.00 6.27 ? 5 GLU B O 1
ATOM 95 C CB . GLU B 1 5 ? -2.233 -4.329 7.532 1.00 6.21 ? 5 GLU B CB 1
ATOM 96 C CG . GLU B 1 5 ? -2.564 -5.586 8.307 1.00 8.29 ? 5 GLU B CG 1
ATOM 97 C CD . GLU B 1 5 ? -2.615 -6.807 7.440 1.00 12.04 ? 5 GLU B CD 1
ATOM 98 O OE1 . GLU B 1 5 ? -2.165 -7.881 7.904 1.00 17.15 ? 5 GLU B OE1 1
ATOM 99 O OE2 . GLU B 1 5 ? -3.105 -6.686 6.295 1.00 10.96 ? 5 GLU B OE2 1
ATOM 100 N N . ILE B 1 6 ? -2.510 -3.645 10.729 1.00 6.91 ? 6 ILE B N 1
ATOM 101 C CA . ILE B 1 6 ? -2.035 -4.073 12.033 1.00 6.78 ? 6 ILE B CA 1
ATOM 102 C C . ILE B 1 6 ? -2.538 -5.480 12.361 1.00 11.07 ? 6 ILE B C 1
ATOM 103 O O . ILE B 1 6 ? -3.711 -5.810 12.194 1.00 11.63 ? 6 ILE B O 1
ATOM 104 C CB . ILE B 1 6 ? -2.460 -3.106 13.133 1.00 9.33 ? 6 ILE B CB 1
ATOM 105 C CG1 . ILE B 1 6 ? -1.879 -1.718 12.862 1.00 7.79 ? 6 ILE B CG1 1
ATOM 106 C CG2 . ILE B 1 6 ? -1.968 -3.618 14.480 1.00 9.28 ? 6 ILE B CG2 1
ATOM 107 C CD1 . ILE B 1 6 ? -2.202 -0.694 13.933 1.00 8.63 ? 6 ILE B CD1 1
ATOM 108 O OXT . ILE B 1 6 ? -1.762 -6.330 12.800 1.00 17.89 ? 6 ILE B OXT 1
HETATM 109 C C1 . TFA C 2 . ? 1.362 -6.743 17.469 1.00 14.40 ? 101 TFA A C1 1
HETATM 110 C C2 . TFA C 2 . ? -0.024 -6.557 16.887 1.00 13.88 ? 101 TFA A C2 1
HETATM 111 O O . TFA C 2 . ? 2.301 -5.983 17.107 1.00 13.23 ? 101 TFA A O 1
HETATM 112 F F1 . TFA C 2 . ? -0.794 -7.589 17.289 1.00 17.86 ? 101 TFA A F1 1
HETATM 113 F F2 . TFA C 2 . ? -0.559 -5.408 17.318 1.00 12.12 ? 101 TFA A F2 1
HETATM 114 F F3 . TFA C 2 . ? 0.072 -6.507 15.551 1.00 14.17 ? 101 TFA A F3 1
HETATM 115 O OXT . TFA C 2 . ? 1.569 -7.675 18.301 1.00 14.48 ? 101 TFA A OXT 1
HETATM 116 O O . HOH D 3 . ? 3.609 -8.090 8.943 1.00 9.80 ? 201 HOH A O 1
HETATM 117 O O . HOH E 3 . ? 0.414 -7.052 11.963 1.00 16.91 ? 101 HOH B O 1
HETATM 118 O O . HOH E 3 . ? -3.593 5.733 -6.060 1.00 15.69 ? 102 HOH B O 1
HETATM 119 O O . HOH E 3 . ? 0.239 -8.498 9.435 1.00 16.13 ? 103 HOH B O 1
#