data_5K2G
#
_entry.id 5K2G
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.387
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 5K2G pdb_00005k2g 10.2210/pdb5k2g/pdb
WWPDB D_1000221629 ? ?
EMDB EMD-8198 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2016-09-14
2 'Structure model' 1 1 2016-09-21
3 'Structure model' 1 2 2016-10-05
4 'Structure model' 1 3 2016-10-19
5 'Structure model' 1 4 2016-11-30
6 'Structure model' 1 5 2017-09-13
7 'Structure model' 1 6 2018-04-25
8 'Structure model' 1 7 2019-11-20
9 'Structure model' 1 8 2021-06-30
10 'Structure model' 1 9 2024-03-06
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Database references'
2 3 'Structure model' 'Database references'
3 4 'Structure model' 'Database references'
4 5 'Structure model' 'Refinement description'
5 6 'Structure model' 'Author supporting evidence'
6 6 'Structure model' 'Data collection'
7 7 'Structure model' 'Data collection'
8 8 'Structure model' 'Author supporting evidence'
9 9 'Structure model' 'Data collection'
10 10 'Structure model' 'Data collection'
11 10 'Structure model' 'Database references'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 6 'Structure model' em_software
2 6 'Structure model' pdbx_audit_support
3 7 'Structure model' diffrn_source
4 8 'Structure model' pdbx_audit_support
5 9 'Structure model' diffrn_detector
6 10 'Structure model' chem_comp_atom
7 10 'Structure model' chem_comp_bond
8 10 'Structure model' database_2
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 6 'Structure model' '_em_software.name'
2 6 'Structure model' '_pdbx_audit_support.funding_organization'
3 7 'Structure model' '_diffrn_source.source'
4 8 'Structure model' '_pdbx_audit_support.funding_organization'
5 9 'Structure model' '_diffrn_detector.detector'
6 10 'Structure model' '_database_2.pdbx_DOI'
7 10 'Structure model' '_database_2.pdbx_database_accession'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.entry_id 5K2G
_pdbx_database_status.recvd_initial_deposition_date 2016-05-18
_pdbx_database_status.SG_entry N
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_nmr_data ?
#
loop_
_pdbx_database_related.db_name
_pdbx_database_related.details
_pdbx_database_related.db_id
_pdbx_database_related.content_type
EMDB . EMD-8198 'associated EM volume'
EMDB . EMD-8196 'other EM volume'
EMDB . EMD-8197 'other EM volume'
EMDB . EMD-8199 'other EM volume'
PDB 'NNQQNY from yeast prion Sup35 with zinc' 5K2E unspecified
PDB 'NNQQNY from yeast prion Sup35 with cadmium' 5K2F unspecified
PDB 'GNNQQNY from yeast prion Sup35 in space group P212121' 5K2H unspecified
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Rodriguez, J.A.' 1
'Sawaya, M.R.' 2
'Cascio, D.' 3
'Eisenberg, D.S.' 4
#
_citation.abstract ?
_citation.abstract_id_CAS ?
_citation.book_id_ISBN ?
_citation.book_publisher ?
_citation.book_publisher_city ?
_citation.book_title ?
_citation.coordinate_linkage ?
_citation.country US
_citation.database_id_Medline ?
_citation.details ?
_citation.id primary
_citation.journal_abbrev Proc.Natl.Acad.Sci.USA
_citation.journal_id_ASTM PNASA6
_citation.journal_id_CSD 0040
_citation.journal_id_ISSN 1091-6490
_citation.journal_full ?
_citation.journal_issue ?
_citation.journal_volume 113
_citation.language ?
_citation.page_first 11232
_citation.page_last 11236
_citation.title 'Ab initio structure determination from prion nanocrystals at atomic resolution by MicroED.'
_citation.year 2016
_citation.database_id_CSD ?
_citation.pdbx_database_id_DOI 10.1073/pnas.1606287113
_citation.pdbx_database_id_PubMed 27647903
_citation.unpublished_flag ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Sawaya, M.R.' 1 ?
primary 'Rodriguez, J.' 2 ?
primary 'Cascio, D.' 3 ?
primary 'Collazo, M.J.' 4 ?
primary 'Shi, D.' 5 ?
primary 'Reyes, F.E.' 6 ?
primary 'Hattne, J.' 7 ?
primary 'Gonen, T.' 8 ?
primary 'Eisenberg, D.S.' 9 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn 'Eukaryotic peptide chain release factor GTP-binding subunit' 836.807 1 ? ? 'UNP residues 7-13' ?
2 water nat water 18.015 7 ? ? ? ?
#
_entity_name_com.entity_id 1
_entity_name_com.name
;SUP35, ERF-3, ERF3, ERF2, G1 to S phase transition protein 1, Omnipotent suppressor protein 2, PSI no more protein 2, Polypeptide release factor 3, Translation release factor 3
;
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code GNNQQNY
_entity_poly.pdbx_seq_one_letter_code_can GNNQQNY
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
_pdbx_entity_nonpoly.entity_id 2
_pdbx_entity_nonpoly.name water
_pdbx_entity_nonpoly.comp_id HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 GLY n
1 2 ASN n
1 3 ASN n
1 4 GLN n
1 5 GLN n
1 6 ASN n
1 7 TYR n
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num 1
_pdbx_entity_src_syn.pdbx_end_seq_num 7
_pdbx_entity_src_syn.organism_scientific 'Saccharomyces cerevisiae'
_pdbx_entity_src_syn.organism_common_name
;Baker's yeast
;
_pdbx_entity_src_syn.ncbi_taxonomy_id 4932
_pdbx_entity_src_syn.details ?
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118
GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067
HOH non-polymer . WATER ? 'H2 O' 18.015
TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 GLY 1 1 1 GLY GLY A . n
A 1 2 ASN 2 2 2 ASN ASN A . n
A 1 3 ASN 3 3 3 ASN ASN A . n
A 1 4 GLN 4 4 4 GLN GLN A . n
A 1 5 GLN 5 5 5 GLN GLN A . n
A 1 6 ASN 6 6 6 ASN ASN A . n
A 1 7 TYR 7 7 7 TYR TYR A . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HOH 1 101 4 HOH HOH A .
B 2 HOH 2 102 7 HOH HOH A .
B 2 HOH 3 103 2 HOH HOH A .
B 2 HOH 4 104 6 HOH HOH A .
B 2 HOH 5 105 1 HOH HOH A .
B 2 HOH 6 106 5 HOH HOH A .
B 2 HOH 7 107 3 HOH HOH A .
#
loop_
_software.citation_id
_software.classification
_software.compiler_name
_software.compiler_version
_software.contact_author
_software.contact_author_email
_software.date
_software.description
_software.dependencies
_software.hardware
_software.language
_software.location
_software.mods
_software.name
_software.os
_software.os_version
_software.type
_software.version
_software.pdbx_ordinal
? 'data scaling' ? ? 'Zbyszek Otwinowski' hkl@hkl-xray.com ? ? ? ? ? http://www.hkl-xray.com/ ?
SCALEPACK ? ? program . 1
? refinement ? ? 'Garib N. Murshudov' garib@ysbl.york.ac.uk ? ? ? ? Fortran_77
http://www.ccp4.ac.uk/dist/html/refmac5.html ? REFMAC ? ? program . 2
? 'data extraction' ? ? PDB deposit@deposit.rcsb.org 'June. 20, 2015' ? ? ? C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/ ? PDB_EXTRACT ? ? package 3.20 3
#
_cell.angle_alpha 90.000
_cell.angle_alpha_esd ?
_cell.angle_beta 107.770
_cell.angle_beta_esd ?
_cell.angle_gamma 90.000
_cell.angle_gamma_esd ?
_cell.entry_id 5K2G
_cell.details ?
_cell.formula_units_Z ?
_cell.length_a 22.870
_cell.length_a_esd ?
_cell.length_b 4.930
_cell.length_b_esd ?
_cell.length_c 24.180
_cell.length_c_esd ?
_cell.volume ?
_cell.volume_esd ?
_cell.Z_PDB 2
_cell.reciprocal_angle_alpha ?
_cell.reciprocal_angle_beta ?
_cell.reciprocal_angle_gamma ?
_cell.reciprocal_angle_alpha_esd ?
_cell.reciprocal_angle_beta_esd ?
_cell.reciprocal_angle_gamma_esd ?
_cell.reciprocal_length_a ?
_cell.reciprocal_length_b ?
_cell.reciprocal_length_c ?
_cell.reciprocal_length_a_esd ?
_cell.reciprocal_length_b_esd ?
_cell.reciprocal_length_c_esd ?
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 5K2G
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 4
_symmetry.space_group_name_Hall ?
_symmetry.space_group_name_H-M 'P 1 21 1'
_symmetry.pdbx_full_space_group_name_H-M ?
#
_exptl.absorpt_coefficient_mu ?
_exptl.absorpt_correction_T_max ?
_exptl.absorpt_correction_T_min ?
_exptl.absorpt_correction_type ?
_exptl.absorpt_process_details ?
_exptl.entry_id 5K2G
_exptl.crystals_number ?
_exptl.details ?
_exptl.method 'ELECTRON CRYSTALLOGRAPHY'
_exptl.method_details ?
#
_exptl_crystal.colour ?
_exptl_crystal.density_diffrn ?
_exptl_crystal.density_Matthews ?
_exptl_crystal.density_method ?
_exptl_crystal.density_percent_sol ?
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.id 1
_exptl_crystal.preparation ?
_exptl_crystal.size_max ?
_exptl_crystal.size_mid ?
_exptl_crystal.size_min ?
_exptl_crystal.size_rad ?
_exptl_crystal.colour_lustre ?
_exptl_crystal.colour_modifier ?
_exptl_crystal.colour_primary ?
_exptl_crystal.density_meas ?
_exptl_crystal.density_meas_esd ?
_exptl_crystal.density_meas_gt ?
_exptl_crystal.density_meas_lt ?
_exptl_crystal.density_meas_temp ?
_exptl_crystal.density_meas_temp_esd ?
_exptl_crystal.density_meas_temp_gt ?
_exptl_crystal.density_meas_temp_lt ?
_exptl_crystal.pdbx_crystal_image_url ?
_exptl_crystal.pdbx_crystal_image_format ?
_exptl_crystal.pdbx_mosaicity ?
_exptl_crystal.pdbx_mosaicity_esd ?
#
_exptl_crystal_grow.apparatus ?
_exptl_crystal_grow.atmosphere ?
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.details ?
_exptl_crystal_grow.method BATCH
_exptl_crystal_grow.method_ref ?
_exptl_crystal_grow.pH 7.0
_exptl_crystal_grow.pressure ?
_exptl_crystal_grow.pressure_esd ?
_exptl_crystal_grow.seeding ?
_exptl_crystal_grow.seeding_ref ?
_exptl_crystal_grow.temp 273
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.temp_esd ?
_exptl_crystal_grow.time ?
_exptl_crystal_grow.pdbx_details water
_exptl_crystal_grow.pdbx_pH_range ?
#
_diffrn.ambient_environment ?
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.ambient_temp_esd ?
_diffrn.crystal_id 1
_diffrn.crystal_support ?
_diffrn.crystal_treatment ?
_diffrn.details ?
_diffrn.id 1
_diffrn.ambient_pressure ?
_diffrn.ambient_pressure_esd ?
_diffrn.ambient_pressure_gt ?
_diffrn.ambient_pressure_lt ?
_diffrn.ambient_temp_gt ?
_diffrn.ambient_temp_lt ?
_diffrn.pdbx_serial_crystal_experiment ?
#
_diffrn_detector.details ?
_diffrn_detector.detector CCD
_diffrn_detector.diffrn_id 1
_diffrn_detector.type 'TVIPS F416 CMOS CAMERA'
_diffrn_detector.area_resol_mean ?
_diffrn_detector.dtime ?
_diffrn_detector.pdbx_frames_total ?
_diffrn_detector.pdbx_collection_time_total ?
_diffrn_detector.pdbx_collection_date 2016-02-03
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 0.0251
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.current ?
_diffrn_source.details ?
_diffrn_source.diffrn_id 1
_diffrn_source.power ?
_diffrn_source.size ?
_diffrn_source.source 'ELECTRON MICROSCOPE'
_diffrn_source.target ?
_diffrn_source.type 'TECNAI F20 TEM'
_diffrn_source.voltage ?
_diffrn_source.take-off_angle ?
_diffrn_source.pdbx_wavelength_list 0.0251
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_synchrotron_beamline ?
_diffrn_source.pdbx_synchrotron_site ?
#
_refine.aniso_B[1][1] 0.2300
_refine.aniso_B[1][2] 0.0000
_refine.aniso_B[1][3] 0.0800
_refine.aniso_B[2][2] -0.5600
_refine.aniso_B[2][3] 0.0000
_refine.aniso_B[3][3] 0.2300
_refine.B_iso_max 20.070
_refine.B_iso_mean 5.0980
_refine.B_iso_min 2.400
_refine.correlation_coeff_Fo_to_Fc 0.9540
_refine.correlation_coeff_Fo_to_Fc_free 0.9470
_refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT'
_refine.diff_density_max ?
_refine.diff_density_max_esd ?
_refine.diff_density_min ?
_refine.diff_density_min_esd ?
_refine.diff_density_rms ?
_refine.diff_density_rms_esd ?
_refine.entry_id 5K2G
_refine.pdbx_refine_id 'ELECTRON CRYSTALLOGRAPHY'
_refine.ls_abs_structure_details ?
_refine.ls_abs_structure_Flack ?
_refine.ls_abs_structure_Flack_esd ?
_refine.ls_abs_structure_Rogers ?
_refine.ls_abs_structure_Rogers_esd ?
_refine.ls_d_res_high 1.1000
_refine.ls_d_res_low 23.0300
_refine.ls_extinction_coef ?
_refine.ls_extinction_coef_esd ?
_refine.ls_extinction_expression ?
_refine.ls_extinction_method ?
_refine.ls_goodness_of_fit_all ?
_refine.ls_goodness_of_fit_all_esd ?
_refine.ls_goodness_of_fit_obs ?
_refine.ls_goodness_of_fit_obs_esd ?
_refine.ls_hydrogen_treatment ?
_refine.ls_matrix_type ?
_refine.ls_number_constraints ?
_refine.ls_number_parameters ?
_refine.ls_number_reflns_all ?
_refine.ls_number_reflns_obs 1997
_refine.ls_number_reflns_R_free 222
_refine.ls_number_reflns_R_work ?
_refine.ls_number_restraints ?
_refine.ls_percent_reflns_obs 92.5400
_refine.ls_percent_reflns_R_free 10.0000
_refine.ls_R_factor_all ?
_refine.ls_R_factor_obs 0.1902
_refine.ls_R_factor_R_free 0.2242
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_R_factor_R_work 0.1866
_refine.ls_R_Fsqd_factor_obs ?
_refine.ls_R_I_factor_obs ?
_refine.ls_redundancy_reflns_all ?
_refine.ls_redundancy_reflns_obs ?
_refine.ls_restrained_S_all ?
_refine.ls_restrained_S_obs ?
_refine.ls_shift_over_esd_max ?
_refine.ls_shift_over_esd_mean ?
_refine.ls_structure_factor_coef ?
_refine.ls_weighting_details ?
_refine.ls_weighting_scheme ?
_refine.ls_wR_factor_all ?
_refine.ls_wR_factor_obs ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.occupancy_max ?
_refine.occupancy_min ?
_refine.solvent_model_details ?
_refine.solvent_model_param_bsol ?
_refine.solvent_model_param_ksol ?
_refine.ls_R_factor_gt ?
_refine.ls_goodness_of_fit_gt ?
_refine.ls_goodness_of_fit_ref ?
_refine.ls_shift_over_su_max ?
_refine.ls_shift_over_su_max_lt ?
_refine.ls_shift_over_su_mean ?
_refine.ls_shift_over_su_mean_lt ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 0.000
_refine.pdbx_ls_sigma_Fsqd ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.pdbx_method_to_determine_struct ?
_refine.pdbx_starting_model ?
_refine.pdbx_stereochemistry_target_values ?
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_overall_ESU_R 0.0470
_refine.pdbx_overall_ESU_R_Free 0.0480
_refine.pdbx_solvent_vdw_probe_radii 1.2000
_refine.pdbx_solvent_ion_probe_radii 0.8000
_refine.pdbx_solvent_shrinkage_radii 0.8000
_refine.pdbx_real_space_R ?
_refine.pdbx_density_correlation ?
_refine.pdbx_pd_number_of_powder_patterns ?
_refine.pdbx_pd_number_of_points ?
_refine.pdbx_pd_meas_number_of_points ?
_refine.pdbx_pd_proc_ls_prof_R_factor ?
_refine.pdbx_pd_proc_ls_prof_wR_factor ?
_refine.pdbx_pd_Marquardt_correlation_coeff ?
_refine.pdbx_pd_Fsqrd_R_factor ?
_refine.pdbx_pd_ls_matrix_band_width ?
_refine.pdbx_overall_phase_error ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_diffrn_id 1
_refine.overall_SU_B 1.5660
_refine.overall_SU_ML 0.0340
_refine.overall_SU_R_Cruickshank_DPI 0.0473
_refine.overall_SU_R_free ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_average_fsc_overall ?
_refine.pdbx_average_fsc_work ?
_refine.pdbx_average_fsc_free ?
#
_refine_hist.cycle_id final
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.d_res_high 1.1000
_refine_hist.d_res_low 23.0300
_refine_hist.pdbx_number_atoms_ligand 0
_refine_hist.number_atoms_solvent 7
_refine_hist.number_atoms_total 66
_refine_hist.pdbx_number_residues_total 7
_refine_hist.pdbx_B_iso_mean_solvent 14.51
_refine_hist.pdbx_number_atoms_protein 59
_refine_hist.pdbx_number_atoms_nucleic_acid 0
#
loop_
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.criterion
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.number
_refine_ls_restr.rejects
_refine_ls_restr.type
_refine_ls_restr.weight
_refine_ls_restr.pdbx_restraint_function
'ELECTRON CRYSTALLOGRAPHY' ? 0.019 0.020 59 ? r_bond_refined_d ? ?
'ELECTRON CRYSTALLOGRAPHY' ? 0.001 0.020 48 ? r_bond_other_d ? ?
'ELECTRON CRYSTALLOGRAPHY' ? 1.337 1.857 79 ? r_angle_refined_deg ? ?
'ELECTRON CRYSTALLOGRAPHY' ? 0.979 3.000 105 ? r_angle_other_deg ? ?
'ELECTRON CRYSTALLOGRAPHY' ? 6.832 5.000 6 ? r_dihedral_angle_1_deg ? ?
'ELECTRON CRYSTALLOGRAPHY' ? 60.232 28.333 6 ? r_dihedral_angle_2_deg ? ?
'ELECTRON CRYSTALLOGRAPHY' ? 9.053 15.000 8 ? r_dihedral_angle_3_deg ? ?
'ELECTRON CRYSTALLOGRAPHY' ? 0.075 0.200 6 ? r_chiral_restr ? ?
'ELECTRON CRYSTALLOGRAPHY' ? 0.003 0.020 84 ? r_gen_planes_refined ? ?
'ELECTRON CRYSTALLOGRAPHY' ? 0.001 0.020 20 ? r_gen_planes_other ? ?
'ELECTRON CRYSTALLOGRAPHY' ? 0.466 0.396 27 ? r_mcbond_it ? ?
'ELECTRON CRYSTALLOGRAPHY' ? 0.435 0.378 26 ? r_mcbond_other ? ?
'ELECTRON CRYSTALLOGRAPHY' ? 0.629 0.577 32 ? r_mcangle_it ? ?
'ELECTRON CRYSTALLOGRAPHY' ? 0.467 3.000 107 ? r_rigid_bond_restr ? ?
'ELECTRON CRYSTALLOGRAPHY' ? 13.935 1.000 4 ? r_sphericity_free ? ?
'ELECTRON CRYSTALLOGRAPHY' ? 3.759 1.000 110 ? r_sphericity_bonded ? ?
#
_refine_ls_shell.pdbx_refine_id 'ELECTRON CRYSTALLOGRAPHY'
_refine_ls_shell.d_res_high 1.1000
_refine_ls_shell.d_res_low 1.1290
_refine_ls_shell.number_reflns_all 168
_refine_ls_shell.number_reflns_obs ?
_refine_ls_shell.number_reflns_R_free 17
_refine_ls_shell.number_reflns_R_work 151
_refine_ls_shell.percent_reflns_obs 93.8500
_refine_ls_shell.percent_reflns_R_free ?
_refine_ls_shell.R_factor_all ?
_refine_ls_shell.R_factor_obs ?
_refine_ls_shell.R_factor_R_free 0.2710
_refine_ls_shell.R_factor_R_free_error ?
_refine_ls_shell.R_factor_R_work 0.2190
_refine_ls_shell.redundancy_reflns_all ?
_refine_ls_shell.redundancy_reflns_obs ?
_refine_ls_shell.wR_factor_all ?
_refine_ls_shell.wR_factor_obs ?
_refine_ls_shell.wR_factor_R_free ?
_refine_ls_shell.wR_factor_R_work ?
_refine_ls_shell.pdbx_total_number_of_bins_used 20
_refine_ls_shell.pdbx_phase_error ?
_refine_ls_shell.pdbx_fsc_work ?
_refine_ls_shell.pdbx_fsc_free ?
#
_struct.entry_id 5K2G
_struct.title 'Structure of GNNQQNY from yeast prion Sup35 in space group P21 determined by MicroED'
_struct.pdbx_model_details ?
_struct.pdbx_formula_weight ?
_struct.pdbx_formula_weight_method ?
_struct.pdbx_model_type_details ?
_struct.pdbx_CASP_flag N
#
_struct_keywords.entry_id 5K2G
_struct_keywords.text 'amyloid, yeast prion, PROTEIN FIBRIL'
_struct_keywords.pdbx_keywords 'PROTEIN FIBRIL'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
#
_struct_ref.id 1
_struct_ref.db_name UNP
_struct_ref.db_code ERF3_YEAST
_struct_ref.pdbx_db_accession P05453
_struct_ref.pdbx_db_isoform ?
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code GNNQQNY
_struct_ref.pdbx_align_begin 7
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 5K2G
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 7
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession P05453
_struct_ref_seq.db_align_beg 7
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 13
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 7
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details octadecameric
_pdbx_struct_assembly.oligomeric_count 18
#
loop_
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
_pdbx_struct_assembly_gen.asym_id_list
1 1 A,B
1 2 A,B
1 3 A,B
1 4 A,B
1 5 A,B
1 6 A,B
1 7 A,B
1 8 A,B
1 9 A,B
1 10 A,B
1 11 A,B
1 12 A,B
1 13 A,B
1 14 A,B
1 15 A,B
1 16 A,B
1 17 A,B
1 18 A,B
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 1_515 x,y-4,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 -19.7200000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
3 'crystal symmetry operation' 1_525 x,y-3,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 -14.7900000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
4 'crystal symmetry operation' 1_535 x,y-2,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 -9.8600000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
5 'crystal symmetry operation' 1_545 x,y-1,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 -4.9300000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
6 'crystal symmetry operation' 1_565 x,y+1,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 4.9300000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
7 'crystal symmetry operation' 1_575 x,y+2,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 9.8600000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
8 'crystal symmetry operation' 1_585 x,y+3,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 14.7900000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
9 'crystal symmetry operation' 1_595 x,y+4,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 19.7200000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
10 'crystal symmetry operation' 2_515 -x,y-7/2,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 -17.2550000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
11 'crystal symmetry operation' 2_525 -x,y-5/2,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 -12.3250000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
12 'crystal symmetry operation' 2_535 -x,y-3/2,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 -7.3950000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
13 'crystal symmetry operation' 2_545 -x,y-1/2,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 -2.4650000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
14 'crystal symmetry operation' 2_555 -x,y+1/2,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 2.4650000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
15 'crystal symmetry operation' 2_565 -x,y+3/2,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 7.3950000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
16 'crystal symmetry operation' 2_575 -x,y+5/2,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 12.3250000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
17 'crystal symmetry operation' 2_585 -x,y+7/2,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 17.2550000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
18 'crystal symmetry operation' 2_595 -x,y+9/2,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 22.1850000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
#
_struct_biol.id 1
_struct_biol.details
;The biological unit is an extended pair of beta sheets comprising peptides at positions X,Y,Z and -X,Y+1/2,-Z extended ad infinitum along the b crystal axis.
;
#
_em_3d_fitting.entry_id 5K2G
_em_3d_fitting.id 1
_em_3d_fitting.details ?
_em_3d_fitting.overall_b_value 5.1
_em_3d_fitting.ref_protocol OTHER
_em_3d_fitting.ref_space RECIPROCAL
_em_3d_fitting.target_criteria 'maximum likelihood'
_em_3d_fitting.method ?
#
_em_3d_reconstruction.entry_id 5K2G
_em_3d_reconstruction.id 1
_em_3d_reconstruction.algorithm ?
_em_3d_reconstruction.details
;The density map was obtained using measured diffraction intensities and phases acquired from crystallographic direct methods program SHELXD.
;
_em_3d_reconstruction.image_processing_id 1
_em_3d_reconstruction.num_class_averages ?
_em_3d_reconstruction.num_particles ?
_em_3d_reconstruction.resolution ?
_em_3d_reconstruction.resolution_method 'DIFFRACTION PATTERN/LAYERLINES'
_em_3d_reconstruction.symmetry_type '3D CRYSTAL'
_em_3d_reconstruction.method ?
_em_3d_reconstruction.nominal_pixel_size ?
_em_3d_reconstruction.actual_pixel_size ?
_em_3d_reconstruction.magnification_calibration ?
_em_3d_reconstruction.citation_id ?
_em_3d_reconstruction.euler_angles_details ?
#
_em_buffer.id 1
_em_buffer.details water
_em_buffer.pH 7
_em_buffer.specimen_id 1
_em_buffer.name ?
#
_em_entity_assembly.id 1
_em_entity_assembly.parent_id 0
_em_entity_assembly.details ?
_em_entity_assembly.name 'Prion fibril composed of a 7-residue segment of Sup35'
_em_entity_assembly.source 'MULTIPLE SOURCES'
_em_entity_assembly.type COMPLEX
_em_entity_assembly.entity_id_list 1
_em_entity_assembly.synonym ?
_em_entity_assembly.oligomeric_details ?
#
_em_image_scans.entry_id 5K2G
_em_image_scans.id 1
_em_image_scans.dimension_height 4096
_em_image_scans.dimension_width 4096
_em_image_scans.frames_per_image ?
_em_image_scans.image_recording_id 1
_em_image_scans.sampling_size 15.6
_em_image_scans.scanner_model ?
_em_image_scans.used_frames_per_image ?
_em_image_scans.number_digital_images ?
_em_image_scans.details ?
_em_image_scans.od_range ?
_em_image_scans.quant_bit_size ?
_em_image_scans.citation_id ?
#
_em_imaging.id 1
_em_imaging.entry_id 5K2G
_em_imaging.accelerating_voltage 200
_em_imaging.alignment_procedure BASIC
_em_imaging.c2_aperture_diameter ?
_em_imaging.calibrated_defocus_max ?
_em_imaging.calibrated_defocus_min ?
_em_imaging.calibrated_magnification ?
_em_imaging.cryogen NITROGEN
_em_imaging.details ?
_em_imaging.electron_source 'FIELD EMISSION GUN'
_em_imaging.illumination_mode 'FLOOD BEAM'
_em_imaging.microscope_model 'FEI TECNAI F20'
_em_imaging.mode DIFFRACTION
_em_imaging.nominal_cs ?
_em_imaging.nominal_defocus_max ?
_em_imaging.nominal_defocus_min ?
_em_imaging.nominal_magnification ?
_em_imaging.recording_temperature_maximum 100
_em_imaging.recording_temperature_minimum 100
_em_imaging.residual_tilt ?
_em_imaging.specimen_holder_model 'GATAN 626 SINGLE TILT LIQUID NITROGEN CRYO TRANSFER HOLDER'
_em_imaging.specimen_id 1
_em_imaging.date ?
_em_imaging.temperature ?
_em_imaging.tilt_angle_min ?
_em_imaging.tilt_angle_max ?
_em_imaging.specimen_holder_type ?
_em_imaging.astigmatism ?
_em_imaging.electron_beam_tilt_params ?
_em_imaging.citation_id ?
_em_imaging.detector_distance ?
#
_em_sample_support.id 1
_em_sample_support.specimen_id 1
_em_sample_support.details ?
_em_sample_support.grid_material COPPER
_em_sample_support.grid_mesh_size 300
_em_sample_support.grid_type 'Quantifoil R2/2'
_em_sample_support.method ?
_em_sample_support.film_material ?
_em_sample_support.citation_id ?
#
_em_vitrification.id 1
_em_vitrification.specimen_id 1
_em_vitrification.chamber_temperature ?
_em_vitrification.cryogen_name ETHANE
_em_vitrification.details 'Plunged into liquid ethane (FEI VITROBOT MARK IV)'
_em_vitrification.humidity ?
_em_vitrification.instrument 'FEI VITROBOT MARK IV'
_em_vitrification.entry_id 5K2G
_em_vitrification.temp ?
_em_vitrification.method ?
_em_vitrification.time_resolved_state ?
_em_vitrification.citation_id ?
#
_em_experiment.entry_id 5K2G
_em_experiment.id 1
_em_experiment.aggregation_state '3D ARRAY'
_em_experiment.reconstruction_method CRYSTALLOGRAPHY
_em_experiment.entity_assembly_id 1
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
ASN N N N N 1
ASN CA C N S 2
ASN C C N N 3
ASN O O N N 4
ASN CB C N N 5
ASN CG C N N 6
ASN OD1 O N N 7
ASN ND2 N N N 8
ASN OXT O N N 9
ASN H H N N 10
ASN H2 H N N 11
ASN HA H N N 12
ASN HB2 H N N 13
ASN HB3 H N N 14
ASN HD21 H N N 15
ASN HD22 H N N 16
ASN HXT H N N 17
GLN N N N N 18
GLN CA C N S 19
GLN C C N N 20
GLN O O N N 21
GLN CB C N N 22
GLN CG C N N 23
GLN CD C N N 24
GLN OE1 O N N 25
GLN NE2 N N N 26
GLN OXT O N N 27
GLN H H N N 28
GLN H2 H N N 29
GLN HA H N N 30
GLN HB2 H N N 31
GLN HB3 H N N 32
GLN HG2 H N N 33
GLN HG3 H N N 34
GLN HE21 H N N 35
GLN HE22 H N N 36
GLN HXT H N N 37
GLY N N N N 38
GLY CA C N N 39
GLY C C N N 40
GLY O O N N 41
GLY OXT O N N 42
GLY H H N N 43
GLY H2 H N N 44
GLY HA2 H N N 45
GLY HA3 H N N 46
GLY HXT H N N 47
HOH O O N N 48
HOH H1 H N N 49
HOH H2 H N N 50
TYR N N N N 51
TYR CA C N S 52
TYR C C N N 53
TYR O O N N 54
TYR CB C N N 55
TYR CG C Y N 56
TYR CD1 C Y N 57
TYR CD2 C Y N 58
TYR CE1 C Y N 59
TYR CE2 C Y N 60
TYR CZ C Y N 61
TYR OH O N N 62
TYR OXT O N N 63
TYR H H N N 64
TYR H2 H N N 65
TYR HA H N N 66
TYR HB2 H N N 67
TYR HB3 H N N 68
TYR HD1 H N N 69
TYR HD2 H N N 70
TYR HE1 H N N 71
TYR HE2 H N N 72
TYR HH H N N 73
TYR HXT H N N 74
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ASN N CA sing N N 1
ASN N H sing N N 2
ASN N H2 sing N N 3
ASN CA C sing N N 4
ASN CA CB sing N N 5
ASN CA HA sing N N 6
ASN C O doub N N 7
ASN C OXT sing N N 8
ASN CB CG sing N N 9
ASN CB HB2 sing N N 10
ASN CB HB3 sing N N 11
ASN CG OD1 doub N N 12
ASN CG ND2 sing N N 13
ASN ND2 HD21 sing N N 14
ASN ND2 HD22 sing N N 15
ASN OXT HXT sing N N 16
GLN N CA sing N N 17
GLN N H sing N N 18
GLN N H2 sing N N 19
GLN CA C sing N N 20
GLN CA CB sing N N 21
GLN CA HA sing N N 22
GLN C O doub N N 23
GLN C OXT sing N N 24
GLN CB CG sing N N 25
GLN CB HB2 sing N N 26
GLN CB HB3 sing N N 27
GLN CG CD sing N N 28
GLN CG HG2 sing N N 29
GLN CG HG3 sing N N 30
GLN CD OE1 doub N N 31
GLN CD NE2 sing N N 32
GLN NE2 HE21 sing N N 33
GLN NE2 HE22 sing N N 34
GLN OXT HXT sing N N 35
GLY N CA sing N N 36
GLY N H sing N N 37
GLY N H2 sing N N 38
GLY CA C sing N N 39
GLY CA HA2 sing N N 40
GLY CA HA3 sing N N 41
GLY C O doub N N 42
GLY C OXT sing N N 43
GLY OXT HXT sing N N 44
HOH O H1 sing N N 45
HOH O H2 sing N N 46
TYR N CA sing N N 47
TYR N H sing N N 48
TYR N H2 sing N N 49
TYR CA C sing N N 50
TYR CA CB sing N N 51
TYR CA HA sing N N 52
TYR C O doub N N 53
TYR C OXT sing N N 54
TYR CB CG sing N N 55
TYR CB HB2 sing N N 56
TYR CB HB3 sing N N 57
TYR CG CD1 doub Y N 58
TYR CG CD2 sing Y N 59
TYR CD1 CE1 sing Y N 60
TYR CD1 HD1 sing N N 61
TYR CD2 CE2 doub Y N 62
TYR CD2 HD2 sing N N 63
TYR CE1 CZ doub Y N 64
TYR CE1 HE1 sing N N 65
TYR CE2 CZ sing Y N 66
TYR CE2 HE2 sing N N 67
TYR CZ OH sing N N 68
TYR OH HH sing N N 69
TYR OXT HXT sing N N 70
#
_em_3d_crystal_entity.id 1
_em_3d_crystal_entity.image_processing_id 1
_em_3d_crystal_entity.angle_alpha 90.00
_em_3d_crystal_entity.angle_beta 107.77
_em_3d_crystal_entity.angle_gamma 90.00
_em_3d_crystal_entity.length_a 22.870
_em_3d_crystal_entity.length_b 4.930
_em_3d_crystal_entity.length_c 24.180
_em_3d_crystal_entity.space_group_name 'P 1 21 1'
_em_3d_crystal_entity.space_group_num 4
#
_em_crystal_formation.id 1
_em_crystal_formation.specimen_id 1
_em_crystal_formation.atmosphere 'in air, in sealed chamber, in equilibrium with reservoir solution'
_em_crystal_formation.details
'Grown in batch at ~20 degrees C in a microcentrifuge tube. Crystals grew within a day after seeding with NNQQNY-Zn crystals.'
_em_crystal_formation.instrument '24-well plate'
_em_crystal_formation.lipid_mixture none
_em_crystal_formation.lipid_protein_ratio ?
_em_crystal_formation.temperature 298
_em_crystal_formation.time 1
_em_crystal_formation.time_unit DAY
#
_em_ctf_correction.id 1
_em_ctf_correction.em_image_processing_id 1
_em_ctf_correction.type NONE
_em_ctf_correction.details ?
#
_em_diffraction.id 1
_em_diffraction.camera_length 1350
_em_diffraction.imaging_id 1
_em_diffraction.tilt_angle_list ?
#
loop_
_em_diffraction_shell.id
_em_diffraction_shell.em_diffraction_stats_id
_em_diffraction_shell.fourier_space_coverage
_em_diffraction_shell.high_resolution
_em_diffraction_shell.low_resolution
_em_diffraction_shell.multiplicity
_em_diffraction_shell.num_structure_factors
_em_diffraction_shell.phase_residual
1 1 89.9 1.71 90 5.8 613 0.1
2 1 92.9 1.36 1.71 6.9 585 0.1
3 1 93.2 1.19 1.36 6.5 549 0.1
4 1 93.8 1.10 1.19 4.8 471 0.1
5 1 92.3 1.10 90 6.6 2218 0.1
#
_em_diffraction_stats.id 1
_em_diffraction_stats.details
;Phase statistics are not applicable. No imaging was used. The phases were obtained by a crystallographic direct methods program, shelxd.
;
_em_diffraction_stats.image_processing_id 1
_em_diffraction_stats.fourier_space_coverage 82.7
_em_diffraction_stats.high_resolution 1.00
_em_diffraction_stats.num_intensities_measured 16753
_em_diffraction_stats.num_structure_factors 2399
_em_diffraction_stats.overall_phase_error 0.1
_em_diffraction_stats.overall_phase_residual 0.1
_em_diffraction_stats.phase_error_rejection_criteria 0
_em_diffraction_stats.r_merge 15.1
_em_diffraction_stats.r_sym 15.1
#
_em_entity_assembly_molwt.entity_assembly_id 1
_em_entity_assembly_molwt.id 1
_em_entity_assembly_molwt.experimental_flag NO
_em_entity_assembly_molwt.units KILODALTONS/NANOMETER
_em_entity_assembly_molwt.value 3.25
#
_em_entity_assembly_naturalsource.id 1
_em_entity_assembly_naturalsource.entity_assembly_id 1
_em_entity_assembly_naturalsource.cell ?
_em_entity_assembly_naturalsource.cellular_location ?
_em_entity_assembly_naturalsource.ncbi_tax_id 4932
_em_entity_assembly_naturalsource.organ .
_em_entity_assembly_naturalsource.organelle ?
_em_entity_assembly_naturalsource.organism 'Saccharomyces cerevisiae'
_em_entity_assembly_naturalsource.strain ?
_em_entity_assembly_naturalsource.tissue .
#
_em_image_processing.id 1
_em_image_processing.image_recording_id 1
_em_image_processing.details ?
#
_em_image_recording.id 1
_em_image_recording.imaging_id 1
_em_image_recording.avg_electron_dose_per_image 0.01
_em_image_recording.average_exposure_time 2
_em_image_recording.details 'The detector was operated in rolling shutter mode with 2x2 pixel binning.'
_em_image_recording.detector_mode ?
_em_image_recording.film_or_detector_model 'TVIPS TEMCAM-F416 (4k x 4k)'
_em_image_recording.num_diffraction_images 879
_em_image_recording.num_grids_imaged 2
_em_image_recording.num_real_images ?
#
_em_imaging_optics.id 1
_em_imaging_optics.imaging_id 1
_em_imaging_optics.chr_aberration_corrector ?
_em_imaging_optics.energyfilter_lower ?
_em_imaging_optics.energyfilter_name none
_em_imaging_optics.energyfilter_upper ?
_em_imaging_optics.phase_plate ?
_em_imaging_optics.sph_aberration_corrector ?
#
loop_
_em_software.id
_em_software.category
_em_software.details
_em_software.name
_em_software.version
_em_software.image_processing_id
_em_software.fitting_id
_em_software.imaging_id
1 'IMAGE ACQUISITION' ? EM-Menu 1 ? ? 1
2 MASKING ? ? ? ? ? ?
3 'CTF CORRECTION' ? ? ? 1 ? ?
4 'LAYERLINE INDEXING' ? ? ? ? ? ?
5 'DIFFRACTION INDEXING' ? XDS 'Oct 15, 2015' ? ? ?
6 'MODEL FITTING' ? Coot 0.8.2 ? 1 ?
7 OTHER ? SHELXD 2013/2 ? ? ?
8 'MODEL REFINEMENT' ? refmac5 5.8.0135 ? 1 ?
9 'MOLECULAR REPLACEMENT' ? ? ? 1 ? ?
10 'SYMMETRY DETERMINATION' ? ? ? 1 ? ?
11 'CRYSTALLOGRAPHY MERGING' ? SCALEPACK 1.98.7 1 ? ?
12 RECONSTRUCTION 'direct methods' SHELXD 2013/2 1 ? ?
#
_em_specimen.id 1
_em_specimen.experiment_id 1
_em_specimen.concentration 10
_em_specimen.details crystal
_em_specimen.embedding_applied NO
_em_specimen.shadowing_applied NO
_em_specimen.staining_applied NO
_em_specimen.vitrification_applied YES
#
loop_
_pdbx_audit_support.funding_organization
_pdbx_audit_support.country
_pdbx_audit_support.grant_number
_pdbx_audit_support.ordinal
'National Science Foundation (NSF, United States)' 'United States' MCB-0445429 1
'National Institutes of Health/National Institute on Aging (NIH/NIA)' 'United States' 1R01-AG029430 2
;Alzheimer's Disease Reasearch Center
;
'United States' ? 3
'Howard Hughes Medical Institute (HHMI)' 'United States' ? 4
'Department of Energy (DOE, United States)' 'United States' DE-FC02-02ER63421 5
'Giannini Foundation' 'United States' ? 6
#
_atom_sites.entry_id 5K2G
_atom_sites.fract_transf_matrix[1][1] 0.043725
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.014011
_atom_sites.fract_transf_matrix[2][1] -0.000000
_atom_sites.fract_transf_matrix[2][2] 0.202840
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] -0.000000
_atom_sites.fract_transf_matrix[3][3] 0.043428
_atom_sites.fract_transf_vector[1] 0.000000
_atom_sites.fract_transf_vector[2] 0.000000
_atom_sites.fract_transf_vector[3] 0.000000
#
loop_
_atom_type.symbol
C
H
N
O
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 N N . GLY A 1 1 ? -9.420 4.723 6.046 1.00 6.12 ? 1 GLY A N 1
ATOM 2 C CA . GLY A 1 1 ? -9.341 4.278 4.625 1.00 5.50 ? 1 GLY A CA 1
ATOM 3 C C . GLY A 1 1 ? -8.280 3.203 4.428 1.00 4.81 ? 1 GLY A C 1
ATOM 4 O O . GLY A 1 1 ? -7.898 2.523 5.371 1.00 5.91 ? 1 GLY A O 1
ATOM 5 H H1 . GLY A 1 1 ? -8.962 5.618 6.142 1.00 6.16 ? 1 GLY A H1 1
ATOM 6 H H2 . GLY A 1 1 ? -10.342 4.809 6.298 1.00 5.96 ? 1 GLY A H2 1
ATOM 7 H H3 . GLY A 1 1 ? -8.994 4.084 6.623 1.00 5.99 ? 1 GLY A H3 1
ATOM 8 H HA2 . GLY A 1 1 ? -10.200 3.921 4.349 1.00 5.45 ? 1 GLY A HA2 1
ATOM 9 H HA3 . GLY A 1 1 ? -9.124 5.035 4.059 1.00 5.28 ? 1 GLY A HA3 1
ATOM 10 N N . ASN A 1 2 ? -7.789 3.054 3.197 1.00 3.79 ? 2 ASN A N 1
ATOM 11 C CA . ASN A 1 2 ? -6.701 2.096 2.889 1.00 3.57 ? 2 ASN A CA 1
ATOM 12 C C . ASN A 1 2 ? -5.345 2.604 3.471 1.00 3.28 ? 2 ASN A C 1
ATOM 13 O O . ASN A 1 2 ? -5.107 3.814 3.500 1.00 3.80 ? 2 ASN A O 1
ATOM 14 C CB . ASN A 1 2 ? -6.635 1.841 1.366 1.00 3.94 ? 2 ASN A CB 1
ATOM 15 C CG . ASN A 1 2 ? -7.967 1.349 0.801 1.00 4.41 ? 2 ASN A CG 1
ATOM 16 O OD1 . ASN A 1 2 ? -8.471 0.280 1.183 1.00 4.52 ? 2 ASN A OD1 1
ATOM 17 N ND2 . ASN A 1 2 ? -8.572 2.154 -0.075 1.00 4.75 ? 2 ASN A ND2 1
ATOM 18 H H . ASN A 1 2 ? -8.109 3.595 2.406 1.00 4.04 ? 2 ASN A H 1
ATOM 19 H HA . ASN A 1 2 ? -6.902 1.237 3.316 1.00 3.60 ? 2 ASN A HA 1
ATOM 20 H HB2 . ASN A 1 2 ? -6.393 2.665 0.915 1.00 3.96 ? 2 ASN A HB2 1
ATOM 21 H HB3 . ASN A 1 2 ? -5.969 1.158 1.196 1.00 3.93 ? 2 ASN A HB3 1
ATOM 22 H HD21 . ASN A 1 2 ? -9.525 2.361 0.027 1.00 4.57 ? 2 ASN A HD21 1
ATOM 23 H HD22 . ASN A 1 2 ? -8.064 2.538 -0.819 1.00 4.46 ? 2 ASN A HD22 1
ATOM 24 N N . ASN A 1 3 ? -4.464 1.673 3.888 1.00 3.00 ? 3 ASN A N 1
ATOM 25 C CA . ASN A 1 3 ? -3.177 1.980 4.604 1.00 2.96 ? 3 ASN A CA 1
ATOM 26 C C . ASN A 1 3 ? -1.917 1.409 3.910 1.00 2.77 ? 3 ASN A C 1
ATOM 27 O O . ASN A 1 3 ? -1.876 0.197 3.667 1.00 3.03 ? 3 ASN A O 1
ATOM 28 C CB . ASN A 1 3 ? -3.217 1.439 6.061 1.00 3.36 ? 3 ASN A CB 1
ATOM 29 C CG . ASN A 1 3 ? -1.971 1.806 6.879 1.00 4.03 ? 3 ASN A CG 1
ATOM 30 O OD1 . ASN A 1 3 ? -1.738 2.982 7.162 1.00 6.53 ? 3 ASN A OD1 1
ATOM 31 N ND2 . ASN A 1 3 ? -1.183 0.805 7.278 1.00 4.82 ? 3 ASN A ND2 1
ATOM 32 H H . ASN A 1 3 ? -4.605 0.683 3.750 1.00 3.04 ? 3 ASN A H 1
ATOM 33 H HA . ASN A 1 3 ? -3.063 2.950 4.669 1.00 2.97 ? 3 ASN A HA 1
ATOM 34 H HB2 . ASN A 1 3 ? -3.990 1.812 6.513 1.00 3.24 ? 3 ASN A HB2 1
ATOM 35 H HB3 . ASN A 1 3 ? -3.287 0.471 6.034 1.00 3.44 ? 3 ASN A HB3 1
ATOM 36 H HD21 . ASN A 1 3 ? -1.577 -0.012 7.648 1.00 4.44 ? 3 ASN A HD21 1
ATOM 37 H HD22 . ASN A 1 3 ? -0.209 0.887 7.200 1.00 4.41 ? 3 ASN A HD22 1
ATOM 38 N N . GLN A 1 4 ? -0.909 2.261 3.638 1.00 2.53 ? 4 GLN A N 1
ATOM 39 C CA . GLN A 1 4 ? 0.486 1.861 3.213 1.00 2.46 ? 4 GLN A CA 1
ATOM 40 C C . GLN A 1 4 ? 1.555 2.563 4.093 1.00 2.65 ? 4 GLN A C 1
ATOM 41 O O . GLN A 1 4 ? 1.609 3.797 4.120 1.00 2.83 ? 4 GLN A O 1
ATOM 42 C CB . GLN A 1 4 ? 0.797 2.120 1.700 1.00 2.41 ? 4 GLN A CB 1
ATOM 43 C CG . GLN A 1 4 ? 2.160 1.560 1.238 1.00 2.44 ? 4 GLN A CG 1
ATOM 44 C CD . GLN A 1 4 ? 2.661 2.109 -0.088 1.00 2.64 ? 4 GLN A CD 1
ATOM 45 O OE1 . GLN A 1 4 ? 2.847 3.313 -0.228 1.00 2.82 ? 4 GLN A OE1 1
ATOM 46 N NE2 . GLN A 1 4 ? 2.896 1.224 -1.056 1.00 2.93 ? 4 GLN A NE2 1
ATOM 47 H H . GLN A 1 4 ? -1.009 3.264 3.696 1.00 2.56 ? 4 GLN A H 1
ATOM 48 H HA . GLN A 1 4 ? 0.583 0.899 3.350 1.00 2.52 ? 4 GLN A HA 1
ATOM 49 H HB2 . GLN A 1 4 ? 0.107 1.699 1.163 1.00 2.40 ? 4 GLN A HB2 1
ATOM 50 H HB3 . GLN A 1 4 ? 0.800 3.076 1.541 1.00 2.41 ? 4 GLN A HB3 1
ATOM 51 H HG2 . GLN A 1 4 ? 2.840 1.763 1.897 1.00 2.42 ? 4 GLN A HG2 1
ATOM 52 H HG3 . GLN A 1 4 ? 2.078 0.597 1.148 1.00 2.48 ? 4 GLN A HG3 1
ATOM 53 H HE21 . GLN A 1 4 ? 2.595 1.364 -1.849 1.00 2.76 ? 4 GLN A HE21 1
ATOM 54 H HE22 . GLN A 1 4 ? 3.349 0.512 -0.887 1.00 2.72 ? 4 GLN A HE22 1
ATOM 55 N N . GLN A 1 5 ? 2.376 1.778 4.820 1.00 2.96 ? 5 GLN A N 1
ATOM 56 C CA . GLN A 1 5 ? 3.494 2.307 5.663 1.00 3.17 ? 5 GLN A CA 1
ATOM 57 C C . GLN A 1 5 ? 4.864 1.753 5.184 1.00 3.41 ? 5 GLN A C 1
ATOM 58 O O . GLN A 1 5 ? 5.029 0.530 5.077 1.00 3.84 ? 5 GLN A O 1
ATOM 59 C CB . GLN A 1 5 ? 3.244 2.042 7.173 1.00 3.69 ? 5 GLN A CB 1
ATOM 60 C CG . GLN A 1 5 ? 2.092 2.871 7.759 1.00 3.99 ? 5 GLN A CG 1
ATOM 61 C CD . GLN A 1 5 ? 1.612 2.426 9.129 1.00 4.48 ? 5 GLN A CD 1
ATOM 62 O OE1 . GLN A 1 5 ? 1.027 1.352 9.260 1.00 4.69 ? 5 GLN A OE1 1
ATOM 63 N NE2 . GLN A 1 5 ? 1.854 3.242 10.148 1.00 6.38 ? 5 GLN A NE2 1
ATOM 64 H H . GLN A 1 5 ? 2.305 0.771 4.857 1.00 2.93 ? 5 GLN A H 1
ATOM 65 H HA . GLN A 1 5 ? 3.531 3.280 5.568 1.00 3.26 ? 5 GLN A HA 1
ATOM 66 H HB2 . GLN A 1 5 ? 3.027 1.105 7.295 1.00 3.63 ? 5 GLN A HB2 1
ATOM 67 H HB3 . GLN A 1 5 ? 4.049 2.262 7.667 1.00 3.64 ? 5 GLN A HB3 1
ATOM 68 H HG2 . GLN A 1 5 ? 2.382 3.794 7.830 1.00 4.10 ? 5 GLN A HG2 1
ATOM 69 H HG3 . GLN A 1 5 ? 1.335 2.816 7.154 1.00 4.01 ? 5 GLN A HG3 1
ATOM 70 H HE21 . GLN A 1 5 ? 2.663 3.377 10.408 1.00 5.72 ? 5 GLN A HE21 1
ATOM 71 H HE22 . GLN A 1 5 ? 1.203 3.636 10.548 1.00 5.77 ? 5 GLN A HE22 1
ATOM 72 N N . ASN A 1 6 ? 5.807 2.663 4.874 1.00 3.39 ? 6 ASN A N 1
ATOM 73 C CA . ASN A 1 6 ? 7.163 2.360 4.352 1.00 4.23 ? 6 ASN A CA 1
ATOM 74 C C . ASN A 1 6 ? 8.233 2.814 5.364 1.00 4.24 ? 6 ASN A C 1
ATOM 75 O O . ASN A 1 6 ? 8.619 3.995 5.389 1.00 5.16 ? 6 ASN A O 1
ATOM 76 C CB . ASN A 1 6 ? 7.372 3.031 2.980 1.00 4.61 ? 6 ASN A CB 1
ATOM 77 C CG . ASN A 1 6 ? 6.258 2.703 2.005 1.00 4.96 ? 6 ASN A CG 1
ATOM 78 O OD1 . ASN A 1 6 ? 6.147 1.562 1.529 1.00 5.68 ? 6 ASN A OD1 1
ATOM 79 N ND2 . ASN A 1 6 ? 5.401 3.683 1.730 1.00 4.90 ? 6 ASN A ND2 1
ATOM 80 H H . ASN A 1 6 ? 5.665 3.658 4.976 1.00 3.54 ? 6 ASN A H 1
ATOM 81 H HA . ASN A 1 6 ? 7.261 1.395 4.217 1.00 4.11 ? 6 ASN A HA 1
ATOM 82 H HB2 . ASN A 1 6 ? 7.409 3.994 3.091 1.00 4.59 ? 6 ASN A HB2 1
ATOM 83 H HB3 . ASN A 1 6 ? 8.205 2.711 2.599 1.00 4.47 ? 6 ASN A HB3 1
ATOM 84 H HD21 . ASN A 1 6 ? 4.921 3.689 0.877 1.00 4.76 ? 6 ASN A HD21 1
ATOM 85 H HD22 . ASN A 1 6 ? 5.241 4.397 2.383 1.00 4.83 ? 6 ASN A HD22 1
ATOM 86 N N . TYR A 1 7 ? 8.693 1.873 6.193 1.00 5.36 ? 7 TYR A N 1
ATOM 87 C CA . TYR A 1 7 ? 9.594 2.151 7.331 1.00 5.57 ? 7 TYR A CA 1
ATOM 88 C C . TYR A 1 7 ? 11.077 2.271 6.919 1.00 7.40 ? 7 TYR A C 1
ATOM 89 O O . TYR A 1 7 ? 11.524 1.816 5.866 1.00 8.72 ? 7 TYR A O 1
ATOM 90 C CB . TYR A 1 7 ? 9.417 1.090 8.440 1.00 5.74 ? 7 TYR A CB 1
ATOM 91 C CG . TYR A 1 7 ? 7.993 0.968 9.014 1.00 6.19 ? 7 TYR A CG 1
ATOM 92 C CD1 . TYR A 1 7 ? 7.556 1.775 10.079 1.00 6.70 ? 7 TYR A CD1 1
ATOM 93 C CD2 . TYR A 1 7 ? 7.071 0.050 8.487 1.00 7.16 ? 7 TYR A CD2 1
ATOM 94 C CE1 . TYR A 1 7 ? 6.258 1.664 10.609 1.00 5.65 ? 7 TYR A CE1 1
ATOM 95 C CE2 . TYR A 1 7 ? 5.775 -0.058 9.004 1.00 6.91 ? 7 TYR A CE2 1
ATOM 96 C CZ . TYR A 1 7 ? 5.363 0.740 10.061 1.00 6.73 ? 7 TYR A CZ 1
ATOM 97 O OH . TYR A 1 7 ? 4.073 0.600 10.558 1.00 7.10 ? 7 TYR A OH 1
ATOM 98 O OXT . TYR A 1 7 ? 11.885 2.853 7.657 1.00 8.39 ? 7 TYR A OXT 1
ATOM 99 H H . TYR A 1 7 ? 8.463 0.893 6.105 1.00 5.19 ? 7 TYR A H 1
ATOM 100 H HA . TYR A 1 7 ? 9.335 3.008 7.727 1.00 5.68 ? 7 TYR A HA 1
ATOM 101 H HB2 . TYR A 1 7 ? 9.664 0.226 8.079 1.00 5.95 ? 7 TYR A HB2 1
ATOM 102 H HB3 . TYR A 1 7 ? 10.008 1.314 9.176 1.00 5.71 ? 7 TYR A HB3 1
ATOM 103 H HD1 . TYR A 1 7 ? 8.145 2.390 10.451 1.00 6.43 ? 7 TYR A HD1 1
ATOM 104 H HD2 . TYR A 1 7 ? 7.327 -0.495 7.778 1.00 6.83 ? 7 TYR A HD2 1
ATOM 105 H HE1 . TYR A 1 7 ? 5.995 2.207 11.316 1.00 5.80 ? 7 TYR A HE1 1
ATOM 106 H HE2 . TYR A 1 7 ? 5.185 -0.679 8.639 1.00 6.54 ? 7 TYR A HE2 1
ATOM 107 H HH . TYR A 1 7 ? 4.098 0.426 11.359 1.00 6.95 ? 7 TYR A HH 1
HETATM 108 O O . HOH B 2 . ? 12.095 4.217 10.084 1.00 11.46 ? 101 HOH A O 1
HETATM 109 O O . HOH B 2 . ? -0.431 0.388 11.535 1.00 14.96 ? 102 HOH A O 1
HETATM 110 O O . HOH B 2 . ? 10.942 1.837 3.020 1.00 11.43 ? 103 HOH A O 1
HETATM 111 O O . HOH B 2 . ? -2.614 3.478 9.898 1.00 16.03 ? 104 HOH A O 1
HETATM 112 O O . HOH B 2 . ? -6.853 5.348 7.372 1.00 20.07 ? 105 HOH A O 1
HETATM 113 O O . HOH B 2 . ? 13.890 1.416 9.423 1.00 16.51 ? 106 HOH A O 1
HETATM 114 O O . HOH B 2 . ? -11.403 1.771 -1.545 1.00 11.08 ? 107 HOH A O 1
#
loop_
_atom_site_anisotrop.id
_atom_site_anisotrop.type_symbol
_atom_site_anisotrop.pdbx_label_atom_id
_atom_site_anisotrop.pdbx_label_alt_id
_atom_site_anisotrop.pdbx_label_comp_id
_atom_site_anisotrop.pdbx_label_asym_id
_atom_site_anisotrop.pdbx_label_seq_id
_atom_site_anisotrop.pdbx_PDB_ins_code
_atom_site_anisotrop.U[1][1]
_atom_site_anisotrop.U[2][2]
_atom_site_anisotrop.U[3][3]
_atom_site_anisotrop.U[1][2]
_atom_site_anisotrop.U[1][3]
_atom_site_anisotrop.U[2][3]
_atom_site_anisotrop.pdbx_auth_seq_id
_atom_site_anisotrop.pdbx_auth_comp_id
_atom_site_anisotrop.pdbx_auth_asym_id
_atom_site_anisotrop.pdbx_auth_atom_id
1 N N . GLY A 1 ? 0.0993 0.0651 0.0681 0.0121 0.0297 0.0085 1 GLY A N
2 C CA . GLY A 1 ? 0.0841 0.0542 0.0705 0.0062 0.0308 0.0051 1 GLY A CA
3 C C . GLY A 1 ? 0.0812 0.0546 0.0468 0.0049 0.0259 0.0003 1 GLY A C
4 O O . GLY A 1 ? 0.0971 0.0702 0.0571 0.0121 0.0390 0.0188 1 GLY A O
5 H H1 . GLY A 1 ? 0.0962 0.0686 0.0690 0.0093 0.0272 0.0086 1 GLY A H1
6 H H2 . GLY A 1 ? 0.0940 0.0630 0.0692 0.0081 0.0218 0.0085 1 GLY A H2
7 H H3 . GLY A 1 ? 0.0945 0.0637 0.0692 0.0048 0.0255 0.0097 1 GLY A H3
8 H HA2 . GLY A 1 ? 0.0879 0.0557 0.0635 0.0064 0.0260 0.0031 1 GLY A HA2
9 H HA3 . GLY A 1 ? 0.0863 0.0527 0.0615 0.0050 0.0271 0.0014 1 GLY A HA3
10 N N . ASN A 2 ? 0.0652 0.0388 0.0397 0.0029 0.0141 0.0000 2 ASN A N
11 C CA . ASN A 2 ? 0.0650 0.0283 0.0422 0.0005 0.0065 -0.0010 2 ASN A CA
12 C C . ASN A 2 ? 0.0532 0.0340 0.0372 0.0049 0.0130 0.0057 2 ASN A C
13 O O . ASN A 2 ? 0.0609 0.0322 0.0511 0.0100 0.0051 0.0037 2 ASN A O
14 C CB . ASN A 2 ? 0.0732 0.0327 0.0435 0.0020 0.0075 -0.0040 2 ASN A CB
15 C CG . ASN A 2 ? 0.0773 0.0440 0.0462 0.0013 -0.0003 -0.0019 2 ASN A CG
16 O OD1 . ASN A 2 ? 0.0752 0.0375 0.0587 -0.0011 -0.0012 -0.0120 2 ASN A OD1
17 N ND2 . ASN A 2 ? 0.0847 0.0445 0.0511 0.0131 0.0104 0.0026 2 ASN A ND2
18 H H . ASN A 2 ? 0.0691 0.0393 0.0451 0.0010 0.0107 0.0034 2 ASN A H
19 H HA . ASN A 2 ? 0.0644 0.0326 0.0397 0.0006 0.0105 0.0016 2 ASN A HA
20 H HB2 . ASN A 2 ? 0.0722 0.0357 0.0425 0.0012 0.0057 -0.0016 2 ASN A HB2
21 H HB3 . ASN A 2 ? 0.0716 0.0342 0.0433 0.0028 0.0053 -0.0025 2 ASN A HB3
22 H HD21 . ASN A 2 ? 0.0813 0.0438 0.0485 0.0076 0.0054 0.0009 2 ASN A HD21
23 H HD22 . ASN A 2 ? 0.0799 0.0428 0.0465 0.0068 0.0040 -0.0004 2 ASN A HD22
24 N N . ASN A 3 ? 0.0546 0.0329 0.0262 0.0026 0.0051 0.0010 3 ASN A N
25 C CA . ASN A 3 ? 0.0502 0.0314 0.0309 0.0016 0.0079 0.0016 3 ASN A CA
26 C C . ASN A 3 ? 0.0471 0.0298 0.0282 -0.0003 0.0062 0.0021 3 ASN A C
27 O O . ASN A 3 ? 0.0449 0.0298 0.0401 -0.0009 0.0149 0.0005 3 ASN A O
28 C CB . ASN A 3 ? 0.0613 0.0381 0.0283 0.0080 0.0060 -0.0006 3 ASN A CB
29 C CG . ASN A 3 ? 0.0705 0.0449 0.0376 0.0010 -0.0003 -0.0029 3 ASN A CG
30 O OD1 . ASN A 3 ? 0.1233 0.0439 0.0807 -0.0045 -0.0310 0.0004 3 ASN A OD1
31 N ND2 . ASN A 3 ? 0.0649 0.0556 0.0624 0.0076 0.0134 0.0071 3 ASN A ND2
32 H H . ASN A 3 ? 0.0532 0.0327 0.0293 0.0024 0.0072 0.0017 3 ASN A H
33 H HA . ASN A 3 ? 0.0517 0.0315 0.0295 0.0018 0.0065 0.0009 3 ASN A HA
34 H HB2 . ASN A 3 ? 0.0546 0.0373 0.0309 0.0041 0.0043 -0.0001 3 ASN A HB2
35 H HB3 . ASN A 3 ? 0.0592 0.0386 0.0329 0.0045 0.0051 -0.0002 3 ASN A HB3
36 H HD21 . ASN A 3 ? 0.0658 0.0521 0.0506 0.0042 0.0063 0.0005 3 ASN A HD21
37 H HD22 . ASN A 3 ? 0.0645 0.0513 0.0515 0.0048 0.0072 0.0028 3 ASN A HD22
38 N N . GLN A 4 ? 0.0404 0.0282 0.0273 0.0029 0.0051 0.0001 4 GLN A N
39 C CA . GLN A 4 ? 0.0396 0.0265 0.0273 0.0016 0.0052 0.0005 4 GLN A CA
40 C C . GLN A 4 ? 0.0414 0.0291 0.0302 -0.0036 0.0059 0.0014 4 GLN A C
41 O O . GLN A 4 ? 0.0436 0.0288 0.0349 -0.0037 -0.0024 0.0032 4 GLN A O
42 C CB . GLN A 4 ? 0.0371 0.0265 0.0278 -0.0029 0.0054 -0.0013 4 GLN A CB
43 C CG . GLN A 4 ? 0.0365 0.0296 0.0266 0.0003 0.0011 -0.0005 4 GLN A CG
44 C CD . GLN A 4 ? 0.0425 0.0317 0.0258 0.0006 0.0002 0.0010 4 GLN A CD
45 O OE1 . GLN A 4 ? 0.0440 0.0321 0.0309 -0.0054 -0.0011 -0.0050 4 GLN A OE1
46 N NE2 . GLN A 4 ? 0.0490 0.0362 0.0261 0.0040 -0.0036 -0.0012 4 GLN A NE2
47 H H . GLN A 4 ? 0.0419 0.0279 0.0274 0.0017 0.0053 0.0006 4 GLN A H
48 H HA . GLN A 4 ? 0.0405 0.0268 0.0282 0.0007 0.0055 0.0014 4 GLN A HA
49 H HB2 . GLN A 4 ? 0.0361 0.0277 0.0272 -0.0008 0.0039 -0.0007 4 GLN A HB2
50 H HB3 . GLN A 4 ? 0.0373 0.0270 0.0272 -0.0012 0.0039 -0.0001 4 GLN A HB3
51 H HG2 . GLN A 4 ? 0.0362 0.0294 0.0261 -0.0004 0.0017 -0.0003 4 GLN A HG2
52 H HG3 . GLN A 4 ? 0.0379 0.0295 0.0265 0.0000 0.0016 -0.0001 4 GLN A HG3
53 H HE21 . GLN A 4 ? 0.0450 0.0342 0.0255 0.0022 -0.0021 -0.0006 4 GLN A HE21
54 H HE22 . GLN A 4 ? 0.0441 0.0333 0.0258 0.0004 -0.0021 -0.0008 4 GLN A HE22
55 N N . GLN A 5 ? 0.0485 0.0341 0.0296 -0.0003 0.0065 0.0044 5 GLN A N
56 C CA . GLN A 5 ? 0.0497 0.0355 0.0351 -0.0013 0.0075 -0.0010 5 GLN A CA
57 C C . GLN A 5 ? 0.0566 0.0304 0.0423 -0.0015 0.0191 0.0021 5 GLN A C
58 O O . GLN A 5 ? 0.0557 0.0339 0.0564 0.0127 0.0245 0.0047 5 GLN A O
59 C CB . GLN A 5 ? 0.0592 0.0439 0.0371 -0.0035 0.0080 0.0051 5 GLN A CB
60 C CG . GLN A 5 ? 0.0671 0.0509 0.0333 -0.0010 0.0106 0.0001 5 GLN A CG
61 C CD . GLN A 5 ? 0.0725 0.0567 0.0411 -0.0031 0.0167 0.0066 5 GLN A CD
62 O OE1 . GLN A 5 ? 0.0616 0.0679 0.0487 -0.0102 0.0091 0.0135 5 GLN A OE1
63 N NE2 . GLN A 5 ? 0.0911 0.0855 0.0657 -0.0027 0.0065 -0.0168 5 GLN A NE2
64 H H . GLN A 5 ? 0.0465 0.0338 0.0307 -0.0006 0.0065 0.0020 5 GLN A H
65 H HA . GLN A 5 ? 0.0524 0.0360 0.0354 -0.0020 0.0093 0.0013 5 GLN A HA
66 H HB2 . GLN A 5 ? 0.0585 0.0434 0.0358 -0.0037 0.0086 0.0026 5 GLN A HB2
67 H HB3 . GLN A 5 ? 0.0593 0.0430 0.0358 -0.0031 0.0089 0.0025 5 GLN A HB3
68 H HG2 . GLN A 5 ? 0.0670 0.0514 0.0371 -0.0025 0.0110 0.0022 5 GLN A HG2
69 H HG3 . GLN A 5 ? 0.0652 0.0505 0.0363 -0.0024 0.0107 0.0026 5 GLN A HG3
70 H HE21 . GLN A 5 ? 0.0858 0.0739 0.0574 -0.0017 0.0137 -0.0062 5 GLN A HE21
71 H HE22 . GLN A 5 ? 0.0867 0.0742 0.0582 -0.0062 0.0079 -0.0051 5 GLN A HE22
72 N N . ASN A 6 ? 0.0639 0.0315 0.0331 -0.0082 0.0155 -0.0030 6 ASN A N
73 C CA . ASN A 6 ? 0.0742 0.0384 0.0479 0.0004 0.0246 -0.0109 6 ASN A CA
74 C C . ASN A 6 ? 0.0755 0.0443 0.0410 -0.0006 0.0260 -0.0068 6 ASN A C
75 O O . ASN A 6 ? 0.0911 0.0401 0.0646 0.0041 0.0153 -0.0093 6 ASN A O
76 C CB . ASN A 6 ? 0.0839 0.0366 0.0544 0.0014 0.0291 -0.0060 6 ASN A CB
77 C CG . ASN A 6 ? 0.0996 0.0408 0.0481 -0.0119 0.0241 0.0053 6 ASN A CG
78 O OD1 . ASN A 6 ? 0.1103 0.0354 0.0701 -0.0118 0.0357 0.0064 6 ASN A OD1
79 N ND2 . ASN A 6 ? 0.0943 0.0438 0.0480 -0.0086 0.0251 -0.0082 6 ASN A ND2
80 H H . ASN A 6 ? 0.0635 0.0336 0.0374 -0.0024 0.0178 -0.0042 6 ASN A H
81 H HA . ASN A 6 ? 0.0739 0.0374 0.0448 0.0001 0.0235 -0.0070 6 ASN A HA
82 H HB2 . ASN A 6 ? 0.0859 0.0370 0.0512 -0.0017 0.0264 -0.0063 6 ASN A HB2
83 H HB3 . ASN A 6 ? 0.0842 0.0363 0.0493 0.0010 0.0283 -0.0057 6 ASN A HB3
84 H HD21 . ASN A 6 ? 0.0896 0.0405 0.0505 -0.0080 0.0240 -0.0042 6 ASN A HD21
85 H HD22 . ASN A 6 ? 0.0939 0.0392 0.0503 -0.0072 0.0250 -0.0064 6 ASN A HD22
86 N N . TYR A 7 ? 0.0946 0.0510 0.0579 0.0039 0.0237 0.0032 7 TYR A N
87 C CA . TYR A 7 ? 0.1115 0.0513 0.0485 0.0061 0.0241 -0.0018 7 TYR A CA
88 C C . TYR A 7 ? 0.1128 0.0944 0.0738 -0.0004 0.0277 -0.0118 7 TYR A C
89 O O . TYR A 7 ? 0.1273 0.1120 0.0917 0.0207 0.0368 -0.0206 7 TYR A O
90 C CB . TYR A 7 ? 0.1151 0.0489 0.0541 -0.0147 0.0226 -0.0031 7 TYR A CB
91 C CG . TYR A 7 ? 0.1187 0.0557 0.0605 -0.0063 0.0298 0.0000 7 TYR A CG
92 C CD1 . TYR A 7 ? 0.1191 0.0677 0.0676 -0.0104 0.0403 -0.0051 7 TYR A CD1
93 C CD2 . TYR A 7 ? 0.1301 0.0636 0.0783 -0.0042 0.0195 -0.0146 7 TYR A CD2
94 C CE1 . TYR A 7 ? 0.1179 0.0521 0.0444 -0.0033 0.0351 -0.0022 7 TYR A CE1
95 C CE2 . TYR A 7 ? 0.1254 0.0620 0.0751 -0.0040 0.0135 -0.0164 7 TYR A CE2
96 C CZ . TYR A 7 ? 0.1315 0.0501 0.0739 -0.0058 0.0251 -0.0062 7 TYR A CZ
97 O OH . TYR A 7 ? 0.1218 0.0702 0.0775 0.0152 0.0155 0.0094 7 TYR A OH
98 O OXT . TYR A 7 ? 0.0841 0.1359 0.0987 0.0038 0.0229 -0.0195 7 TYR A OXT
99 H H . TYR A 7 ? 0.0939 0.0519 0.0511 0.0032 0.0244 -0.0006 7 TYR A H
100 H HA . TYR A 7 ? 0.1067 0.0537 0.0554 0.0032 0.0252 -0.0070 7 TYR A HA
101 H HB2 . TYR A 7 ? 0.1151 0.0557 0.0549 -0.0035 0.0247 -0.0031 7 TYR A HB2
102 H HB3 . TYR A 7 ? 0.1126 0.0512 0.0529 -0.0082 0.0227 -0.0029 7 TYR A HB3
103 H HD1 . TYR A 7 ? 0.1207 0.0582 0.0652 -0.0042 0.0363 -0.0036 7 TYR A HD1
104 H HD2 . TYR A 7 ? 0.1256 0.0569 0.0769 -0.0013 0.0204 -0.0092 7 TYR A HD2
105 H HE1 . TYR A 7 ? 0.1197 0.0424 0.0583 0.0060 0.0347 -0.0051 7 TYR A HE1
106 H HE2 . TYR A 7 ? 0.1238 0.0511 0.0735 -0.0054 0.0210 -0.0099 7 TYR A HE2
107 H HH . TYR A 7 ? 0.1254 0.0618 0.0765 0.0087 0.0186 0.0067 7 TYR A HH
108 O O . HOH B . ? 0.1301 0.2208 0.0845 -0.0396 -0.0294 0.0422 101 HOH A O
109 O O . HOH B . ? 0.2286 0.1555 0.1840 0.0227 0.1630 -0.0281 102 HOH A O
110 O O . HOH B . ? 0.1928 0.1433 0.0981 0.0774 0.0184 0.0090 103 HOH A O
111 O O . HOH B . ? 0.2072 0.1772 0.2247 -0.0174 0.1157 -0.0022 104 HOH A O
112 O O . HOH B . ? 0.2548 0.1623 0.3451 0.0367 -0.0117 0.0452 105 HOH A O
113 O O . HOH B . ? 0.2600 0.2474 0.1198 -0.0503 0.0776 -0.0128 106 HOH A O
114 O O . HOH B . ? 0.1861 0.1673 0.0675 -0.0287 0.0232 0.0376 107 HOH A O
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