data_4XW1
#
_entry.id 4XW1
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.383
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 4XW1 pdb_00004xw1 10.2210/pdb4xw1/pdb
WWPDB D_1000204238 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2016-01-13
2 'Structure model' 2 0 2024-01-10
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Atomic model'
2 2 'Structure model' 'Data collection'
3 2 'Structure model' 'Database references'
4 2 'Structure model' 'Refinement description'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 2 'Structure model' atom_site
2 2 'Structure model' chem_comp_atom
3 2 'Structure model' chem_comp_bond
4 2 'Structure model' database_2
5 2 'Structure model' pdbx_initial_refinement_model
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 2 'Structure model' '_atom_site.occupancy'
2 2 'Structure model' '_database_2.pdbx_DOI'
3 2 'Structure model' '_database_2.pdbx_database_accession'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.entry_id 4XW1
_pdbx_database_status.recvd_initial_deposition_date 2015-01-28
_pdbx_database_status.SG_entry N
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site PDBE
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_nmr_data ?
#
_pdbx_database_related.db_name PDB
_pdbx_database_related.details 'The longer RNA duplex containing CCUG repeats'
_pdbx_database_related.db_id 4XW0
_pdbx_database_related.content_type unspecified
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Kiliszek, A.' 1
'Banaszak, K.' 2
'Rypniewski, W.' 3
#
_citation.abstract ?
_citation.abstract_id_CAS ?
_citation.book_id_ISBN ?
_citation.book_publisher ?
_citation.book_publisher_city ?
_citation.book_title ?
_citation.coordinate_linkage ?
_citation.country UK
_citation.database_id_Medline ?
_citation.details ?
_citation.id primary
_citation.journal_abbrev Rna
_citation.journal_id_ASTM RNARFU
_citation.journal_id_CSD 2122
_citation.journal_id_ISSN 1469-9001
_citation.journal_full ?
_citation.journal_issue ?
_citation.journal_volume 22
_citation.language ?
_citation.page_first 22
_citation.page_last 31
_citation.title 'Watson-Crick-like pairs in CCUG repeats: evidence for tautomeric shifts or protonation.'
_citation.year 2016
_citation.database_id_CSD ?
_citation.pdbx_database_id_DOI 10.1261/rna.052399.115
_citation.pdbx_database_id_PubMed 26543073
_citation.unpublished_flag ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Rypniewski, W.' 1 ?
primary 'Banaszak, K.' 2 ?
primary 'Kulinski, T.' 3 ?
primary 'Kiliszek, A.' 4 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn
;RNA (5'-R(*GP*CP*CP*UP*(LCG)P*CP*CP*UP*G)-3')
;
2835.729 1 ? ? ? ?
2 water nat water 18.015 8 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type polyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer yes
_entity_poly.pdbx_seq_one_letter_code 'GCCU(LCG)CCUG'
_entity_poly.pdbx_seq_one_letter_code_can GCCUGCCUG
_entity_poly.pdbx_strand_id C
_entity_poly.pdbx_target_identifier ?
#
_pdbx_entity_nonpoly.entity_id 2
_pdbx_entity_nonpoly.name water
_pdbx_entity_nonpoly.comp_id HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 G n
1 2 C n
1 3 C n
1 4 U n
1 5 LCG n
1 6 C n
1 7 C n
1 8 U n
1 9 G n
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num 1
_pdbx_entity_src_syn.pdbx_end_seq_num 9
_pdbx_entity_src_syn.organism_scientific 'Homo sapiens'
_pdbx_entity_src_syn.organism_common_name ?
_pdbx_entity_src_syn.ncbi_taxonomy_id 9606
_pdbx_entity_src_syn.details ?
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ?
'C9 H14 N3 O8 P' 323.197
G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ?
'C10 H14 N5 O8 P' 363.221
HOH non-polymer . WATER ?
'H2 O' 18.015
LCG 'RNA linking' n '[(1R,3R,4R,7S)-7-HYDROXY-3-(GUANIN-9-YL)-2,5-DIOXABICYCLO[2.2.1]HEPT-1-YL]METHYL DIHYDROGEN PHOSPHATE' ?
'C11 H14 N5 O8 P' 375.231
U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ?
'C9 H13 N2 O9 P' 324.181
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 G 1 1 1 G G C . n
A 1 2 C 2 2 2 C C C . n
A 1 3 C 3 3 3 C C C . n
A 1 4 U 4 4 4 U U C . n
A 1 5 LCG 5 5 5 LCG LCG C . n
A 1 6 C 6 6 6 C C C . n
A 1 7 C 7 7 7 C C C . n
A 1 8 U 8 8 8 U U C . n
A 1 9 G 9 9 9 G G C . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HOH 1 101 8 HOH HOH C .
B 2 HOH 2 102 1 HOH HOH C .
B 2 HOH 3 103 5 HOH HOH C .
B 2 HOH 4 104 9 HOH HOH C .
B 2 HOH 5 105 2 HOH HOH C .
B 2 HOH 6 106 6 HOH HOH C .
B 2 HOH 7 107 3 HOH HOH C .
B 2 HOH 8 108 7 HOH HOH C .
#
loop_
_software.citation_id
_software.classification
_software.compiler_name
_software.compiler_version
_software.contact_author
_software.contact_author_email
_software.date
_software.description
_software.dependencies
_software.hardware
_software.language
_software.location
_software.mods
_software.name
_software.os
_software.os_version
_software.type
_software.version
_software.pdbx_ordinal
? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(phenix.refine: 1.8.2_1309)' 1
? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2
? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3
? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4
#
_cell.angle_alpha 90.00
_cell.angle_alpha_esd ?
_cell.angle_beta 90.00
_cell.angle_beta_esd ?
_cell.angle_gamma 90.00
_cell.angle_gamma_esd ?
_cell.entry_id 4XW1
_cell.details ?
_cell.formula_units_Z ?
_cell.length_a 26.031
_cell.length_a_esd ?
_cell.length_b 26.031
_cell.length_b_esd ?
_cell.length_c 80.854
_cell.length_c_esd ?
_cell.volume ?
_cell.volume_esd ?
_cell.Z_PDB 8
_cell.reciprocal_angle_alpha ?
_cell.reciprocal_angle_beta ?
_cell.reciprocal_angle_gamma ?
_cell.reciprocal_angle_alpha_esd ?
_cell.reciprocal_angle_beta_esd ?
_cell.reciprocal_angle_gamma_esd ?
_cell.reciprocal_length_a ?
_cell.reciprocal_length_b ?
_cell.reciprocal_length_c ?
_cell.reciprocal_length_a_esd ?
_cell.reciprocal_length_b_esd ?
_cell.reciprocal_length_c_esd ?
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 4XW1
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 95
_symmetry.space_group_name_Hall ?
_symmetry.space_group_name_H-M 'P 43 2 2'
_symmetry.pdbx_full_space_group_name_H-M ?
#
_exptl.absorpt_coefficient_mu ?
_exptl.absorpt_correction_T_max ?
_exptl.absorpt_correction_T_min ?
_exptl.absorpt_correction_type ?
_exptl.absorpt_process_details ?
_exptl.entry_id 4XW1
_exptl.crystals_number ?
_exptl.details ?
_exptl.method 'X-RAY DIFFRACTION'
_exptl.method_details ?
#
_exptl_crystal.colour ?
_exptl_crystal.density_diffrn ?
_exptl_crystal.density_Matthews 2.42
_exptl_crystal.density_method ?
_exptl_crystal.density_percent_sol 49.07
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.id 1
_exptl_crystal.preparation ?
_exptl_crystal.size_max ?
_exptl_crystal.size_mid ?
_exptl_crystal.size_min ?
_exptl_crystal.size_rad ?
_exptl_crystal.colour_lustre ?
_exptl_crystal.colour_modifier ?
_exptl_crystal.colour_primary ?
_exptl_crystal.density_meas ?
_exptl_crystal.density_meas_esd ?
_exptl_crystal.density_meas_gt ?
_exptl_crystal.density_meas_lt ?
_exptl_crystal.density_meas_temp ?
_exptl_crystal.density_meas_temp_esd ?
_exptl_crystal.density_meas_temp_gt ?
_exptl_crystal.density_meas_temp_lt ?
_exptl_crystal.pdbx_crystal_image_url ?
_exptl_crystal.pdbx_crystal_image_format ?
_exptl_crystal.pdbx_mosaicity ?
_exptl_crystal.pdbx_mosaicity_esd ?
#
_exptl_crystal_grow.apparatus ?
_exptl_crystal_grow.atmosphere ?
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.details ?
_exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP'
_exptl_crystal_grow.method_ref ?
_exptl_crystal_grow.pH 6.5
_exptl_crystal_grow.pressure ?
_exptl_crystal_grow.pressure_esd ?
_exptl_crystal_grow.seeding ?
_exptl_crystal_grow.seeding_ref ?
_exptl_crystal_grow.temp 292
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.temp_esd ?
_exptl_crystal_grow.time ?
_exptl_crystal_grow.pdbx_details '10 mM magnesium acetate, sodium cacodylate and 1.3 M Li2SO4.'
_exptl_crystal_grow.pdbx_pH_range ?
#
_diffrn.ambient_environment ?
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.ambient_temp_esd ?
_diffrn.crystal_id 1
_diffrn.crystal_support ?
_diffrn.crystal_treatment ?
_diffrn.details ?
_diffrn.id 1
_diffrn.ambient_pressure ?
_diffrn.ambient_pressure_esd ?
_diffrn.ambient_pressure_gt ?
_diffrn.ambient_pressure_lt ?
_diffrn.ambient_temp_gt ?
_diffrn.ambient_temp_lt ?
#
_diffrn_detector.details ?
_diffrn_detector.detector CCD
_diffrn_detector.diffrn_id 1
_diffrn_detector.type 'MAR CCD 165 mm'
_diffrn_detector.area_resol_mean ?
_diffrn_detector.dtime ?
_diffrn_detector.pdbx_frames_total ?
_diffrn_detector.pdbx_collection_time_total ?
_diffrn_detector.pdbx_collection_date 2013-07-27
#
_diffrn_radiation.collimation ?
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.filter_edge ?
_diffrn_radiation.inhomogeneity ?
_diffrn_radiation.monochromator ?
_diffrn_radiation.polarisn_norm ?
_diffrn_radiation.polarisn_ratio ?
_diffrn_radiation.probe ?
_diffrn_radiation.type ?
_diffrn_radiation.xray_symbol ?
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.pdbx_wavelength_list ?
_diffrn_radiation.pdbx_wavelength ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_analyzer ?
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 0.9184
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.current ?
_diffrn_source.details ?
_diffrn_source.diffrn_id 1
_diffrn_source.power ?
_diffrn_source.size ?
_diffrn_source.source SYNCHROTRON
_diffrn_source.target ?
_diffrn_source.type 'BESSY BEAMLINE 14.2'
_diffrn_source.voltage ?
_diffrn_source.take-off_angle ?
_diffrn_source.pdbx_wavelength_list 0.9184
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_synchrotron_beamline 14.2
_diffrn_source.pdbx_synchrotron_site BESSY
#
_reflns.B_iso_Wilson_estimate ?
_reflns.entry_id 4XW1
_reflns.data_reduction_details ?
_reflns.data_reduction_method ?
_reflns.d_resolution_high 2.3
_reflns.d_resolution_low 20.0
_reflns.details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.number_all ?
_reflns.number_obs 1458
_reflns.observed_criterion ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.observed_criterion_I_max ?
_reflns.observed_criterion_I_min ?
_reflns.observed_criterion_sigma_F ?
_reflns.observed_criterion_sigma_I ?
_reflns.percent_possible_obs 97.6
_reflns.R_free_details ?
_reflns.Rmerge_F_all ?
_reflns.Rmerge_F_obs ?
_reflns.Friedel_coverage ?
_reflns.number_gt ?
_reflns.threshold_expression ?
_reflns.pdbx_redundancy 10.3
_reflns.pdbx_Rmerge_I_obs 0.051
_reflns.pdbx_Rmerge_I_all ?
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_av_sigmaI ?
_reflns.pdbx_netI_over_sigmaI 34.9
_reflns.pdbx_res_netI_over_av_sigmaI_2 ?
_reflns.pdbx_res_netI_over_sigmaI_2 ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_d_res_high_opt ?
_reflns.pdbx_d_res_low_opt ?
_reflns.pdbx_d_res_opt_method ?
_reflns.phase_calculation_details ?
_reflns.pdbx_Rrim_I_all ?
_reflns.pdbx_Rpim_I_all ?
_reflns.pdbx_d_opt ?
_reflns.pdbx_number_measured_all ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
_reflns.pdbx_CC_half ?
_reflns.pdbx_R_split ?
#
_reflns_shell.d_res_high 2.3
_reflns_shell.d_res_low 2.44
_reflns_shell.meanI_over_sigI_all ?
_reflns_shell.meanI_over_sigI_obs 2.55
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_possible ?
_reflns_shell.number_unique_all ?
_reflns_shell.number_unique_obs ?
_reflns_shell.percent_possible_all 85.5
_reflns_shell.percent_possible_obs ?
_reflns_shell.Rmerge_F_all ?
_reflns_shell.Rmerge_F_obs ?
_reflns_shell.Rmerge_I_all ?
_reflns_shell.Rmerge_I_obs 0.657
_reflns_shell.meanI_over_sigI_gt ?
_reflns_shell.meanI_over_uI_all ?
_reflns_shell.meanI_over_uI_gt ?
_reflns_shell.number_measured_gt ?
_reflns_shell.number_unique_gt ?
_reflns_shell.percent_possible_gt ?
_reflns_shell.Rmerge_F_gt ?
_reflns_shell.Rmerge_I_gt ?
_reflns_shell.pdbx_redundancy 5.5
_reflns_shell.pdbx_Rsym_value ?
_reflns_shell.pdbx_chi_squared ?
_reflns_shell.pdbx_netI_over_sigmaI_all ?
_reflns_shell.pdbx_netI_over_sigmaI_obs ?
_reflns_shell.pdbx_Rrim_I_all ?
_reflns_shell.pdbx_Rpim_I_all ?
_reflns_shell.pdbx_rejects ?
_reflns_shell.pdbx_ordinal 1
_reflns_shell.pdbx_diffrn_id 1
_reflns_shell.pdbx_CC_half ?
_reflns_shell.pdbx_R_split ?
#
_refine.aniso_B[1][1] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[2][3] ?
_refine.aniso_B[3][3] ?
_refine.B_iso_max ?
_refine.B_iso_mean ?
_refine.B_iso_min ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.details ?
_refine.diff_density_max ?
_refine.diff_density_max_esd ?
_refine.diff_density_min ?
_refine.diff_density_min_esd ?
_refine.diff_density_rms ?
_refine.diff_density_rms_esd ?
_refine.entry_id 4XW1
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.ls_abs_structure_details ?
_refine.ls_abs_structure_Flack ?
_refine.ls_abs_structure_Flack_esd ?
_refine.ls_abs_structure_Rogers ?
_refine.ls_abs_structure_Rogers_esd ?
_refine.ls_d_res_high 2.302
_refine.ls_d_res_low 20.0
_refine.ls_extinction_coef ?
_refine.ls_extinction_coef_esd ?
_refine.ls_extinction_expression ?
_refine.ls_extinction_method ?
_refine.ls_goodness_of_fit_all ?
_refine.ls_goodness_of_fit_all_esd ?
_refine.ls_goodness_of_fit_obs ?
_refine.ls_goodness_of_fit_obs_esd ?
_refine.ls_hydrogen_treatment ?
_refine.ls_matrix_type ?
_refine.ls_number_constraints ?
_refine.ls_number_parameters ?
_refine.ls_number_reflns_all ?
_refine.ls_number_reflns_obs 1414
_refine.ls_number_reflns_R_free 1414
_refine.ls_number_reflns_R_work ?
_refine.ls_number_restraints ?
_refine.ls_percent_reflns_obs 96.98
_refine.ls_percent_reflns_R_free 100.00
_refine.ls_R_factor_all ?
_refine.ls_R_factor_obs 0.1910
_refine.ls_R_factor_R_free 0.1910
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_R_factor_R_work 0.1910
_refine.ls_R_Fsqd_factor_obs ?
_refine.ls_R_I_factor_obs ?
_refine.ls_redundancy_reflns_all ?
_refine.ls_redundancy_reflns_obs ?
_refine.ls_restrained_S_all ?
_refine.ls_restrained_S_obs ?
_refine.ls_shift_over_esd_max ?
_refine.ls_shift_over_esd_mean ?
_refine.ls_structure_factor_coef ?
_refine.ls_weighting_details ?
_refine.ls_weighting_scheme ?
_refine.ls_wR_factor_all ?
_refine.ls_wR_factor_obs ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.occupancy_max ?
_refine.occupancy_min ?
_refine.solvent_model_details 'FLAT BULK SOLVENT MODEL'
_refine.solvent_model_param_bsol ?
_refine.solvent_model_param_ksol ?
_refine.ls_R_factor_gt ?
_refine.ls_goodness_of_fit_gt ?
_refine.ls_goodness_of_fit_ref ?
_refine.ls_shift_over_su_max ?
_refine.ls_shift_over_su_max_lt ?
_refine.ls_shift_over_su_mean ?
_refine.ls_shift_over_su_mean_lt ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 1.36
_refine.pdbx_ls_sigma_Fsqd ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_ls_cross_valid_method NONE
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_starting_model 3GLP
_refine.pdbx_stereochemistry_target_values ML
_refine.pdbx_R_Free_selection_details ?
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.pdbx_solvent_vdw_probe_radii 1.11
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii 0.90
_refine.pdbx_real_space_R ?
_refine.pdbx_density_correlation ?
_refine.pdbx_pd_number_of_powder_patterns ?
_refine.pdbx_pd_number_of_points ?
_refine.pdbx_pd_meas_number_of_points ?
_refine.pdbx_pd_proc_ls_prof_R_factor ?
_refine.pdbx_pd_proc_ls_prof_wR_factor ?
_refine.pdbx_pd_Marquardt_correlation_coeff ?
_refine.pdbx_pd_Fsqrd_R_factor ?
_refine.pdbx_pd_ls_matrix_band_width ?
_refine.pdbx_overall_phase_error 21.49
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_diffrn_id 1
_refine.overall_SU_B ?
_refine.overall_SU_ML 0.18
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_average_fsc_overall ?
_refine.pdbx_average_fsc_work ?
_refine.pdbx_average_fsc_free ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 187
_refine_hist.pdbx_number_atoms_ligand 0
_refine_hist.number_atoms_solvent 8
_refine_hist.number_atoms_total 195
_refine_hist.d_res_high 2.302
_refine_hist.d_res_low 20.0
#
loop_
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.criterion
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.number
_refine_ls_restr.rejects
_refine_ls_restr.type
_refine_ls_restr.weight
_refine_ls_restr.pdbx_restraint_function
'X-RAY DIFFRACTION' ? 0.007 ? 208 ? f_bond_d ? ?
'X-RAY DIFFRACTION' ? 1.783 ? 322 ? f_angle_d ? ?
'X-RAY DIFFRACTION' ? 12.473 ? 99 ? f_dihedral_angle_d ? ?
'X-RAY DIFFRACTION' ? 0.069 ? 43 ? f_chiral_restr ? ?
'X-RAY DIFFRACTION' ? 0.010 ? 9 ? f_plane_restr ? ?
#
loop_
_refine_ls_shell.pdbx_refine_id
_refine_ls_shell.d_res_high
_refine_ls_shell.d_res_low
_refine_ls_shell.number_reflns_all
_refine_ls_shell.number_reflns_obs
_refine_ls_shell.number_reflns_R_free
_refine_ls_shell.number_reflns_R_work
_refine_ls_shell.percent_reflns_obs
_refine_ls_shell.percent_reflns_R_free
_refine_ls_shell.R_factor_all
_refine_ls_shell.R_factor_obs
_refine_ls_shell.R_factor_R_free
_refine_ls_shell.R_factor_R_free_error
_refine_ls_shell.R_factor_R_work
_refine_ls_shell.redundancy_reflns_all
_refine_ls_shell.redundancy_reflns_obs
_refine_ls_shell.wR_factor_all
_refine_ls_shell.wR_factor_obs
_refine_ls_shell.wR_factor_R_free
_refine_ls_shell.wR_factor_R_work
_refine_ls_shell.pdbx_total_number_of_bins_used
_refine_ls_shell.pdbx_phase_error
_refine_ls_shell.pdbx_fsc_work
_refine_ls_shell.pdbx_fsc_free
'X-RAY DIFFRACTION' 2.3023 2.3846 . . 110 110 80.00 . . . 0.2601 . 0.2601 . . . . . . . . . .
'X-RAY DIFFRACTION' 2.3846 2.4800 . . 128 128 96.00 . . . 0.2437 . 0.2437 . . . . . . . . . .
'X-RAY DIFFRACTION' 2.4800 2.5928 . . 142 142 99.00 . . . 0.2532 . 0.2532 . . . . . . . . . .
'X-RAY DIFFRACTION' 2.5928 2.7293 . . 133 133 99.00 . . . 0.3011 . 0.3011 . . . . . . . . . .
'X-RAY DIFFRACTION' 2.7293 2.9001 . . 147 147 99.00 . . . 0.2879 . 0.2879 . . . . . . . . . .
'X-RAY DIFFRACTION' 2.9001 3.1237 . . 139 139 99.00 . . . 0.2736 . 0.2736 . . . . . . . . . .
'X-RAY DIFFRACTION' 3.1237 3.4374 . . 140 140 97.00 . . . 0.1901 . 0.1901 . . . . . . . . . .
'X-RAY DIFFRACTION' 3.4374 3.9333 . . 143 143 100.00 . . . 0.1825 . 0.1825 . . . . . . . . . .
'X-RAY DIFFRACTION' 3.9333 4.9500 . . 154 154 99.00 . . . 0.1262 . 0.1262 . . . . . . . . . .
'X-RAY DIFFRACTION' 4.9500 26.0327 . . 178 178 99.00 . . . 0.1565 . 0.1565 . . . . . . . . . .
#
_struct.entry_id 4XW1
_struct.title 'Crystal structure of (GCCU(G-LNA)CCUG)2 duplex'
_struct.pdbx_model_details ?
_struct.pdbx_formula_weight ?
_struct.pdbx_formula_weight_method ?
_struct.pdbx_model_type_details ?
_struct.pdbx_CASP_flag ?
#
_struct_keywords.entry_id 4XW1
_struct_keywords.text
;CCUG repeats, RNA duplex, Myotonic Dystrophy type 2, tautomery, LNA residue, 3' overhanging nucleotides, RNA
;
_struct_keywords.pdbx_keywords RNA
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
#
_struct_ref.db_code 4XW1
_struct_ref.db_name PDB
_struct_ref.details ?
_struct_ref.entity_id 1
_struct_ref.id 1
_struct_ref.seq_align ?
_struct_ref.seq_dif ?
_struct_ref.pdbx_db_accession 4XW1
_struct_ref.pdbx_db_isoform ?
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_align_begin 1
_struct_ref.pdbx_align_end ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 4XW1
_struct_ref_seq.pdbx_strand_id C
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 9
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession 4XW1
_struct_ref_seq.db_align_beg 1
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 9
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 9
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details software_defined_assembly
_pdbx_struct_assembly.method_details PISA
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
loop_
_pdbx_struct_assembly_prop.biol_id
_pdbx_struct_assembly_prop.type
_pdbx_struct_assembly_prop.value
_pdbx_struct_assembly_prop.details
1 'ABSA (A^2)' 1890 ?
1 MORE -2 ?
1 'SSA (A^2)' 3420 ?
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1,2
_pdbx_struct_assembly_gen.asym_id_list A,B
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 7_555 y,x,-z+1/4 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 20.2135000000
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
covale1 covale both ? A U 4 "O3'" ? ? ? 1_555 A LCG 5 P ? ? C U 4 C LCG 5 1_555 ? ? ? ? ? ? ? 1.599 ? ?
covale2 covale both ? A LCG 5 "O3'" ? ? ? 1_555 A C 6 P ? ? C LCG 5 C C 6 1_555 ? ? ? ? ? ? ? 1.598 ? ?
hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 6 N3 ? ? C G 1 C C 6 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 6 O2 ? ? C G 1 C C 6 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 6 N4 ? ? C G 1 C C 6 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog4 hydrog ? ? A C 2 N3 ? ? ? 1_555 A LCG 5 N1 ? ? C C 2 C LCG 5 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog5 hydrog ? ? A C 2 N4 ? ? ? 1_555 A LCG 5 O6 ? ? C C 2 C LCG 5 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog6 hydrog ? ? A C 2 O2 ? ? ? 1_555 A LCG 5 N2 ? ? C C 2 C LCG 5 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog7 hydrog ? ? A C 3 N3 ? ? ? 1_555 A U 4 N3 ? ? C C 3 C U 4 7_555 ? ? ? ? ? ? TYPE_18_PAIR ? ? ?
hydrog8 hydrog ? ? A C 3 N4 ? ? ? 1_555 A U 4 O4 ? ? C C 3 C U 4 7_555 ? ? ? ? ? ? TYPE_18_PAIR ? ? ?
hydrog9 hydrog ? ? A U 4 N3 ? ? ? 1_555 A C 3 N3 ? ? C U 4 C C 3 7_555 ? ? ? ? ? ? TYPE_18_PAIR ? ? ?
hydrog10 hydrog ? ? A U 4 O4 ? ? ? 1_555 A C 3 N4 ? ? C U 4 C C 3 7_555 ? ? ? ? ? ? TYPE_18_PAIR ? ? ?
hydrog11 hydrog ? ? A LCG 5 N1 ? ? ? 1_555 A C 2 N3 ? ? C LCG 5 C C 2 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog12 hydrog ? ? A LCG 5 N2 ? ? ? 1_555 A C 2 O2 ? ? C LCG 5 C C 2 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog13 hydrog ? ? A LCG 5 O6 ? ? ? 1_555 A C 2 N4 ? ? C LCG 5 C C 2 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog14 hydrog ? ? A C 6 N3 ? ? ? 1_555 A G 1 N1 ? ? C C 6 C G 1 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog15 hydrog ? ? A C 6 N4 ? ? ? 1_555 A G 1 O6 ? ? C C 6 C G 1 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog16 hydrog ? ? A C 6 O2 ? ? ? 1_555 A G 1 N2 ? ? C C 6 C G 1 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
covale ? ?
hydrog ? ?
#
_pdbx_validate_rmsd_angle.id 1
_pdbx_validate_rmsd_angle.PDB_model_num 1
_pdbx_validate_rmsd_angle.auth_atom_id_1 "O3'"
_pdbx_validate_rmsd_angle.auth_asym_id_1 C
_pdbx_validate_rmsd_angle.auth_comp_id_1 U
_pdbx_validate_rmsd_angle.auth_seq_id_1 4
_pdbx_validate_rmsd_angle.PDB_ins_code_1 ?
_pdbx_validate_rmsd_angle.label_alt_id_1 ?
_pdbx_validate_rmsd_angle.auth_atom_id_2 P
_pdbx_validate_rmsd_angle.auth_asym_id_2 C
_pdbx_validate_rmsd_angle.auth_comp_id_2 LCG
_pdbx_validate_rmsd_angle.auth_seq_id_2 5
_pdbx_validate_rmsd_angle.PDB_ins_code_2 ?
_pdbx_validate_rmsd_angle.label_alt_id_2 ?
_pdbx_validate_rmsd_angle.auth_atom_id_3 OP2
_pdbx_validate_rmsd_angle.auth_asym_id_3 C
_pdbx_validate_rmsd_angle.auth_comp_id_3 LCG
_pdbx_validate_rmsd_angle.auth_seq_id_3 5
_pdbx_validate_rmsd_angle.PDB_ins_code_3 ?
_pdbx_validate_rmsd_angle.label_alt_id_3 ?
_pdbx_validate_rmsd_angle.angle_value 119.68
_pdbx_validate_rmsd_angle.angle_target_value 110.50
_pdbx_validate_rmsd_angle.angle_deviation 9.18
_pdbx_validate_rmsd_angle.angle_standard_deviation 1.10
_pdbx_validate_rmsd_angle.linker_flag Y
#
_pdbx_struct_special_symmetry.id 1
_pdbx_struct_special_symmetry.PDB_model_num 1
_pdbx_struct_special_symmetry.auth_asym_id C
_pdbx_struct_special_symmetry.auth_comp_id HOH
_pdbx_struct_special_symmetry.auth_seq_id 106
_pdbx_struct_special_symmetry.PDB_ins_code ?
_pdbx_struct_special_symmetry.label_asym_id B
_pdbx_struct_special_symmetry.label_comp_id HOH
_pdbx_struct_special_symmetry.label_seq_id .
#
_pdbx_refine_tls.id 1
_pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION'
_pdbx_refine_tls.details ?
_pdbx_refine_tls.method refined
_pdbx_refine_tls.origin_x 7.6478
_pdbx_refine_tls.origin_y 4.2841
_pdbx_refine_tls.origin_z 4.6019
_pdbx_refine_tls.T[1][1] 0.3682
_pdbx_refine_tls.T[1][1]_esd ?
_pdbx_refine_tls.T[1][2] 0.0128
_pdbx_refine_tls.T[1][2]_esd ?
_pdbx_refine_tls.T[1][3] 0.0190
_pdbx_refine_tls.T[1][3]_esd ?
_pdbx_refine_tls.T[2][2] 0.4807
_pdbx_refine_tls.T[2][2]_esd ?
_pdbx_refine_tls.T[2][3] 0.0308
_pdbx_refine_tls.T[2][3]_esd ?
_pdbx_refine_tls.T[3][3] 0.4485
_pdbx_refine_tls.T[3][3]_esd ?
_pdbx_refine_tls.L[1][1] 0.1075
_pdbx_refine_tls.L[1][1]_esd ?
_pdbx_refine_tls.L[1][2] -0.0414
_pdbx_refine_tls.L[1][2]_esd ?
_pdbx_refine_tls.L[1][3] 0.0534
_pdbx_refine_tls.L[1][3]_esd ?
_pdbx_refine_tls.L[2][2] 0.0467
_pdbx_refine_tls.L[2][2]_esd ?
_pdbx_refine_tls.L[2][3] -0.0187
_pdbx_refine_tls.L[2][3]_esd ?
_pdbx_refine_tls.L[3][3] 0.0272
_pdbx_refine_tls.L[3][3]_esd ?
_pdbx_refine_tls.S[1][1] -0.0057
_pdbx_refine_tls.S[1][1]_esd ?
_pdbx_refine_tls.S[1][2] 0.2064
_pdbx_refine_tls.S[1][2]_esd ?
_pdbx_refine_tls.S[1][3] 0.3664
_pdbx_refine_tls.S[1][3]_esd ?
_pdbx_refine_tls.S[2][1] 0.0758
_pdbx_refine_tls.S[2][1]_esd ?
_pdbx_refine_tls.S[2][2] -0.1573
_pdbx_refine_tls.S[2][2]_esd ?
_pdbx_refine_tls.S[2][3] -0.1933
_pdbx_refine_tls.S[2][3]_esd ?
_pdbx_refine_tls.S[3][1] -0.1110
_pdbx_refine_tls.S[3][1]_esd ?
_pdbx_refine_tls.S[3][2] 0.4647
_pdbx_refine_tls.S[3][2]_esd ?
_pdbx_refine_tls.S[3][3] 0.0002
_pdbx_refine_tls.S[3][3]_esd ?
#
_pdbx_refine_tls_group.id 1
_pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION'
_pdbx_refine_tls_group.refine_tls_id 1
_pdbx_refine_tls_group.beg_label_asym_id ?
_pdbx_refine_tls_group.beg_label_seq_id ?
_pdbx_refine_tls_group.beg_auth_asym_id ?
_pdbx_refine_tls_group.beg_auth_seq_id 1
_pdbx_refine_tls_group.end_label_asym_id ?
_pdbx_refine_tls_group.end_label_seq_id ?
_pdbx_refine_tls_group.end_auth_asym_id ?
_pdbx_refine_tls_group.end_auth_seq_id 9
_pdbx_refine_tls_group.selection all
_pdbx_refine_tls_group.selection_details 'chain B'
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
C OP3 O N N 1
C P P N N 2
C OP1 O N N 3
C OP2 O N N 4
C "O5'" O N N 5
C "C5'" C N N 6
C "C4'" C N R 7
C "O4'" O N N 8
C "C3'" C N S 9
C "O3'" O N N 10
C "C2'" C N R 11
C "O2'" O N N 12
C "C1'" C N R 13
C N1 N N N 14
C C2 C N N 15
C O2 O N N 16
C N3 N N N 17
C C4 C N N 18
C N4 N N N 19
C C5 C N N 20
C C6 C N N 21
C HOP3 H N N 22
C HOP2 H N N 23
C "H5'" H N N 24
C "H5''" H N N 25
C "H4'" H N N 26
C "H3'" H N N 27
C "HO3'" H N N 28
C "H2'" H N N 29
C "HO2'" H N N 30
C "H1'" H N N 31
C H41 H N N 32
C H42 H N N 33
C H5 H N N 34
C H6 H N N 35
G OP3 O N N 36
G P P N N 37
G OP1 O N N 38
G OP2 O N N 39
G "O5'" O N N 40
G "C5'" C N N 41
G "C4'" C N R 42
G "O4'" O N N 43
G "C3'" C N S 44
G "O3'" O N N 45
G "C2'" C N R 46
G "O2'" O N N 47
G "C1'" C N R 48
G N9 N Y N 49
G C8 C Y N 50
G N7 N Y N 51
G C5 C Y N 52
G C6 C N N 53
G O6 O N N 54
G N1 N N N 55
G C2 C N N 56
G N2 N N N 57
G N3 N N N 58
G C4 C Y N 59
G HOP3 H N N 60
G HOP2 H N N 61
G "H5'" H N N 62
G "H5''" H N N 63
G "H4'" H N N 64
G "H3'" H N N 65
G "HO3'" H N N 66
G "H2'" H N N 67
G "HO2'" H N N 68
G "H1'" H N N 69
G H8 H N N 70
G H1 H N N 71
G H21 H N N 72
G H22 H N N 73
HOH O O N N 74
HOH H1 H N N 75
HOH H2 H N N 76
LCG P P N N 77
LCG OP1 O N N 78
LCG "O5'" O N N 79
LCG "C5'" C N N 80
LCG "C3'" C N S 81
LCG "C6'" C N N 82
LCG N9 N Y N 83
LCG C8 C Y N 84
LCG C4 C Y N 85
LCG N7 N Y N 86
LCG C5 C Y N 87
LCG C6 C N N 88
LCG "C2'" C N R 89
LCG O6 O N N 90
LCG "C4'" C N R 91
LCG "C1'" C N R 92
LCG C2 C N N 93
LCG N1 N N N 94
LCG "O4'" O N N 95
LCG OP2 O N N 96
LCG N2 N N N 97
LCG N3 N N N 98
LCG "O2'" O N N 99
LCG "O3'" O N N 100
LCG OP3 O N N 101
LCG "H5'" H N N 102
LCG "H5''" H N N 103
LCG "H3'" H N N 104
LCG "H6'1" H N N 105
LCG "H6'2" H N N 106
LCG H8 H N N 107
LCG "H2'" H N N 108
LCG "H1'" H N N 109
LCG H1 H N N 110
LCG HOP2 H N N 111
LCG H21 H N N 112
LCG H22 H N N 113
LCG "HO3'" H N N 114
LCG HOP3 H N N 115
U OP3 O N N 116
U P P N N 117
U OP1 O N N 118
U OP2 O N N 119
U "O5'" O N N 120
U "C5'" C N N 121
U "C4'" C N R 122
U "O4'" O N N 123
U "C3'" C N S 124
U "O3'" O N N 125
U "C2'" C N R 126
U "O2'" O N N 127
U "C1'" C N R 128
U N1 N N N 129
U C2 C N N 130
U O2 O N N 131
U N3 N N N 132
U C4 C N N 133
U O4 O N N 134
U C5 C N N 135
U C6 C N N 136
U HOP3 H N N 137
U HOP2 H N N 138
U "H5'" H N N 139
U "H5''" H N N 140
U "H4'" H N N 141
U "H3'" H N N 142
U "HO3'" H N N 143
U "H2'" H N N 144
U "HO2'" H N N 145
U "H1'" H N N 146
U H3 H N N 147
U H5 H N N 148
U H6 H N N 149
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
C OP3 P sing N N 1
C OP3 HOP3 sing N N 2
C P OP1 doub N N 3
C P OP2 sing N N 4
C P "O5'" sing N N 5
C OP2 HOP2 sing N N 6
C "O5'" "C5'" sing N N 7
C "C5'" "C4'" sing N N 8
C "C5'" "H5'" sing N N 9
C "C5'" "H5''" sing N N 10
C "C4'" "O4'" sing N N 11
C "C4'" "C3'" sing N N 12
C "C4'" "H4'" sing N N 13
C "O4'" "C1'" sing N N 14
C "C3'" "O3'" sing N N 15
C "C3'" "C2'" sing N N 16
C "C3'" "H3'" sing N N 17
C "O3'" "HO3'" sing N N 18
C "C2'" "O2'" sing N N 19
C "C2'" "C1'" sing N N 20
C "C2'" "H2'" sing N N 21
C "O2'" "HO2'" sing N N 22
C "C1'" N1 sing N N 23
C "C1'" "H1'" sing N N 24
C N1 C2 sing N N 25
C N1 C6 sing N N 26
C C2 O2 doub N N 27
C C2 N3 sing N N 28
C N3 C4 doub N N 29
C C4 N4 sing N N 30
C C4 C5 sing N N 31
C N4 H41 sing N N 32
C N4 H42 sing N N 33
C C5 C6 doub N N 34
C C5 H5 sing N N 35
C C6 H6 sing N N 36
G OP3 P sing N N 37
G OP3 HOP3 sing N N 38
G P OP1 doub N N 39
G P OP2 sing N N 40
G P "O5'" sing N N 41
G OP2 HOP2 sing N N 42
G "O5'" "C5'" sing N N 43
G "C5'" "C4'" sing N N 44
G "C5'" "H5'" sing N N 45
G "C5'" "H5''" sing N N 46
G "C4'" "O4'" sing N N 47
G "C4'" "C3'" sing N N 48
G "C4'" "H4'" sing N N 49
G "O4'" "C1'" sing N N 50
G "C3'" "O3'" sing N N 51
G "C3'" "C2'" sing N N 52
G "C3'" "H3'" sing N N 53
G "O3'" "HO3'" sing N N 54
G "C2'" "O2'" sing N N 55
G "C2'" "C1'" sing N N 56
G "C2'" "H2'" sing N N 57
G "O2'" "HO2'" sing N N 58
G "C1'" N9 sing N N 59
G "C1'" "H1'" sing N N 60
G N9 C8 sing Y N 61
G N9 C4 sing Y N 62
G C8 N7 doub Y N 63
G C8 H8 sing N N 64
G N7 C5 sing Y N 65
G C5 C6 sing N N 66
G C5 C4 doub Y N 67
G C6 O6 doub N N 68
G C6 N1 sing N N 69
G N1 C2 sing N N 70
G N1 H1 sing N N 71
G C2 N2 sing N N 72
G C2 N3 doub N N 73
G N2 H21 sing N N 74
G N2 H22 sing N N 75
G N3 C4 sing N N 76
HOH O H1 sing N N 77
HOH O H2 sing N N 78
LCG P OP1 doub N N 79
LCG P "O5'" sing N N 80
LCG P OP2 sing N N 81
LCG P OP3 sing N N 82
LCG "O5'" "C5'" sing N N 83
LCG "C5'" "C4'" sing N N 84
LCG "C5'" "H5'" sing N N 85
LCG "C5'" "H5''" sing N N 86
LCG "C3'" "C2'" sing N N 87
LCG "C3'" "C4'" sing N N 88
LCG "C3'" "O3'" sing N N 89
LCG "C3'" "H3'" sing N N 90
LCG "C6'" "C4'" sing N N 91
LCG "C6'" "O2'" sing N N 92
LCG "C6'" "H6'1" sing N N 93
LCG "C6'" "H6'2" sing N N 94
LCG N9 C8 sing Y N 95
LCG N9 C4 sing Y N 96
LCG N9 "C1'" sing N N 97
LCG C8 N7 doub Y N 98
LCG C8 H8 sing N N 99
LCG C4 C5 doub Y N 100
LCG C4 N3 sing N N 101
LCG N7 C5 sing Y N 102
LCG C5 C6 sing N N 103
LCG C6 O6 doub N N 104
LCG C6 N1 sing N N 105
LCG "C2'" "C1'" sing N N 106
LCG "C2'" "O2'" sing N N 107
LCG "C2'" "H2'" sing N N 108
LCG "C4'" "O4'" sing N N 109
LCG "C1'" "O4'" sing N N 110
LCG "C1'" "H1'" sing N N 111
LCG C2 N1 sing N N 112
LCG C2 N2 sing N N 113
LCG C2 N3 doub N N 114
LCG N1 H1 sing N N 115
LCG OP2 HOP2 sing N N 116
LCG N2 H21 sing N N 117
LCG N2 H22 sing N N 118
LCG "O3'" "HO3'" sing N N 119
LCG OP3 HOP3 sing N N 120
U OP3 P sing N N 121
U OP3 HOP3 sing N N 122
U P OP1 doub N N 123
U P OP2 sing N N 124
U P "O5'" sing N N 125
U OP2 HOP2 sing N N 126
U "O5'" "C5'" sing N N 127
U "C5'" "C4'" sing N N 128
U "C5'" "H5'" sing N N 129
U "C5'" "H5''" sing N N 130
U "C4'" "O4'" sing N N 131
U "C4'" "C3'" sing N N 132
U "C4'" "H4'" sing N N 133
U "O4'" "C1'" sing N N 134
U "C3'" "O3'" sing N N 135
U "C3'" "C2'" sing N N 136
U "C3'" "H3'" sing N N 137
U "O3'" "HO3'" sing N N 138
U "C2'" "O2'" sing N N 139
U "C2'" "C1'" sing N N 140
U "C2'" "H2'" sing N N 141
U "O2'" "HO2'" sing N N 142
U "C1'" N1 sing N N 143
U "C1'" "H1'" sing N N 144
U N1 C2 sing N N 145
U N1 C6 sing N N 146
U C2 O2 doub N N 147
U C2 N3 sing N N 148
U N3 C4 sing N N 149
U N3 H3 sing N N 150
U C4 O4 doub N N 151
U C4 C5 sing N N 152
U C5 C6 doub N N 153
U C5 H5 sing N N 154
U C6 H6 sing N N 155
#
loop_
_ndb_struct_conf_na.entry_id
_ndb_struct_conf_na.feature
4XW1 'double helix'
4XW1 'a-form double helix'
4XW1 'mismatched base pair'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A G 1 1_555 A C 6 7_555 -0.212 -0.062 0.020 2.450 -4.777 1.695 1 C_G1:C6_C C 1 ? C 6 ? 19 1
1 A C 2 1_555 A LCG 5 7_555 0.247 -0.273 -0.275 6.794 -6.354 0.145 2 C_C2:LCG5_C C 2 ? C 5 ? 19 1
1 A C 3 1_555 A U 4 7_555 0.546 -1.723 0.413 5.756 -9.870 14.391 3 C_C3:U4_C C 3 ? C 4 ? 18 1
1 A U 4 1_555 A C 3 7_555 -0.546 -1.723 0.413 -5.756 -9.870 14.391 4 C_U4:C3_C C 4 ? C 3 ? 18 1
1 A LCG 5 1_555 A C 2 7_555 -0.247 -0.273 -0.275 -6.793 -6.354 0.145 5 C_LCG5:C2_C C 5 ? C 2 ? 19 1
1 A C 6 1_555 A G 1 7_555 0.212 -0.062 0.020 -2.450 -4.777 1.695 6 C_C6:G1_C C 6 ? C 1 ? 19 1
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A G 1 1_555 A C 6 7_555 A C 2 1_555 A LCG 5 7_555 -0.815 -1.980 3.209 -2.244 2.874 31.999 -4.064 1.084 3.072 5.192
4.055 32.201 1 CC_G1C2:LCG5C6_CC C 1 ? C 6 ? C 2 ? C 5 ?
1 A C 2 1_555 A LCG 5 7_555 A C 3 1_555 A U 4 7_555 0.328 -1.397 3.270 -6.182 12.073 28.792 -4.567 -1.631 2.388 22.752
11.651 31.766 2 CC_C2C3:U4LCG5_CC C 2 ? C 5 ? C 3 ? C 4 ?
1 A C 3 1_555 A U 4 7_555 A U 4 1_555 A C 3 7_555 0.000 -1.395 3.635 0.000 19.056 31.579 -4.822 0.000 2.432 31.668
0.000 36.757 3 CC_C3U4:C3U4_CC C 3 ? C 4 ? C 4 ? C 3 ?
1 A U 4 1_555 A C 3 7_555 A LCG 5 1_555 A C 2 7_555 -0.328 -1.397 3.270 6.182 12.073 28.792 -4.567 1.631 2.388 22.752
-11.651 31.766 4 CC_U4LCG5:C2C3_CC C 4 ? C 3 ? C 5 ? C 2 ?
1 A LCG 5 1_555 A C 2 7_555 A C 6 1_555 A G 1 7_555 0.815 -1.980 3.209 2.244 2.874 31.999 -4.064 -1.084 3.072 5.192
-4.055 32.201 5 CC_LCG5C6:G1C2_CC C 5 ? C 2 ? C 6 ? C 1 ?
#
_pdbx_audit_support.funding_organization 'National Science Centre'
_pdbx_audit_support.country Poland
_pdbx_audit_support.grant_number UMO-2011/01/B/NZ1/04429
_pdbx_audit_support.ordinal 1
#
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'experimental model'
_pdbx_initial_refinement_model.source_name PDB
_pdbx_initial_refinement_model.accession_code 3GLP
_pdbx_initial_refinement_model.details ?
#
_atom_sites.entry_id 4XW1
_atom_sites.fract_transf_matrix[1][1] 0.038416
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.038416
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.012368
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
N
O
P
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 O "O5'" . G A 1 1 ? 13.787 8.368 13.246 1.00 59.49 ? 1 G C "O5'" 1
ATOM 2 C "C5'" . G A 1 1 ? 15.020 7.747 13.584 1.00 54.83 ? 1 G C "C5'" 1
ATOM 3 C "C4'" . G A 1 1 ? 14.810 6.673 14.614 1.00 48.26 ? 1 G C "C4'" 1
ATOM 4 O "O4'" . G A 1 1 ? 14.097 7.244 15.728 1.00 44.13 ? 1 G C "O4'" 1
ATOM 5 C "C3'" . G A 1 1 ? 13.934 5.508 14.184 1.00 45.72 ? 1 G C "C3'" 1
ATOM 6 O "O3'" . G A 1 1 ? 14.646 4.519 13.467 1.00 41.86 ? 1 G C "O3'" 1
ATOM 7 C "C2'" . G A 1 1 ? 13.389 4.999 15.508 1.00 43.32 ? 1 G C "C2'" 1
ATOM 8 O "O2'" . G A 1 1 ? 14.410 4.275 16.181 1.00 40.53 ? 1 G C "O2'" 1
ATOM 9 C "C1'" . G A 1 1 ? 13.185 6.306 16.256 1.00 43.65 ? 1 G C "C1'" 1
ATOM 10 N N9 . G A 1 1 ? 11.828 6.861 16.114 1.00 40.96 ? 1 G C N9 1
ATOM 11 C C8 . G A 1 1 ? 11.509 8.028 15.464 1.00 40.78 ? 1 G C C8 1
ATOM 12 N N7 . G A 1 1 ? 10.235 8.308 15.502 1.00 39.62 ? 1 G C N7 1
ATOM 13 C C5 . G A 1 1 ? 9.682 7.269 16.246 1.00 39.73 ? 1 G C C5 1
ATOM 14 C C6 . G A 1 1 ? 8.335 7.033 16.631 1.00 39.31 ? 1 G C C6 1
ATOM 15 O O6 . G A 1 1 ? 7.342 7.727 16.364 1.00 38.28 ? 1 G C O6 1
ATOM 16 N N1 . G A 1 1 ? 8.201 5.873 17.375 1.00 33.85 ? 1 G C N1 1
ATOM 17 C C2 . G A 1 1 ? 9.237 5.037 17.688 1.00 40.12 ? 1 G C C2 1
ATOM 18 N N2 . G A 1 1 ? 8.924 3.938 18.405 1.00 37.68 ? 1 G C N2 1
ATOM 19 N N3 . G A 1 1 ? 10.499 5.245 17.333 1.00 40.09 ? 1 G C N3 1
ATOM 20 C C4 . G A 1 1 ? 10.654 6.375 16.634 1.00 39.46 ? 1 G C C4 1
ATOM 21 P P . C A 1 2 ? 13.858 3.591 12.419 1.00 46.17 ? 2 C C P 1
ATOM 22 O OP1 . C A 1 2 ? 14.877 2.727 11.802 1.00 47.31 ? 2 C C OP1 1
ATOM 23 O OP2 . C A 1 2 ? 12.971 4.453 11.590 1.00 48.17 ? 2 C C OP2 1
ATOM 24 O "O5'" . C A 1 2 ? 12.921 2.671 13.319 1.00 44.25 ? 2 C C "O5'" 1
ATOM 25 C "C5'" . C A 1 2 ? 13.487 1.676 14.157 1.00 39.35 ? 2 C C "C5'" 1
ATOM 26 C "C4'" . C A 1 2 ? 12.412 0.829 14.767 1.00 35.27 ? 2 C C "C4'" 1
ATOM 27 O "O4'" . C A 1 2 ? 11.660 1.619 15.734 1.00 34.18 ? 2 C C "O4'" 1
ATOM 28 C "C3'" . C A 1 2 ? 11.342 0.327 13.798 1.00 36.77 ? 2 C C "C3'" 1
ATOM 29 O "O3'" . C A 1 2 ? 11.760 -0.803 13.055 1.00 33.46 ? 2 C C "O3'" 1
ATOM 30 C "C2'" . C A 1 2 ? 10.189 0.039 14.741 1.00 38.95 ? 2 C C "C2'" 1
ATOM 31 O "O2'" . C A 1 2 ? 10.467 -1.135 15.482 1.00 41.19 ? 2 C C "O2'" 1
ATOM 32 C "C1'" . C A 1 2 ? 10.303 1.223 15.709 1.00 40.26 ? 2 C C "C1'" 1
ATOM 33 N N1 . C A 1 2 ? 9.476 2.371 15.267 1.00 36.62 ? 2 C C N1 1
ATOM 34 C C2 . C A 1 2 ? 8.110 2.355 15.558 1.00 35.84 ? 2 C C C2 1
ATOM 35 O O2 . C A 1 2 ? 7.628 1.397 16.171 1.00 36.65 ? 2 C C O2 1
ATOM 36 N N3 . C A 1 2 ? 7.324 3.378 15.180 1.00 35.83 ? 2 C C N3 1
ATOM 37 C C4 . C A 1 2 ? 7.848 4.404 14.511 1.00 37.32 ? 2 C C C4 1
ATOM 38 N N4 . C A 1 2 ? 7.008 5.390 14.150 1.00 34.92 ? 2 C C N4 1
ATOM 39 C C5 . C A 1 2 ? 9.239 4.447 14.179 1.00 36.25 ? 2 C C C5 1
ATOM 40 C C6 . C A 1 2 ? 10.009 3.416 14.567 1.00 36.87 ? 2 C C C6 1
ATOM 41 P P . C A 1 3 ? 11.089 -1.200 11.652 1.00 41.28 ? 3 C C P 1
ATOM 42 O OP1 . C A 1 3 ? 11.749 -2.455 11.239 1.00 46.40 ? 3 C C OP1 1
ATOM 43 O OP2 . C A 1 3 ? 11.090 -0.051 10.705 1.00 45.44 ? 3 C C OP2 1
ATOM 44 O "O5'" . C A 1 3 ? 9.553 -1.486 11.953 1.00 31.96 ? 3 C C "O5'" 1
ATOM 45 C "C5'" . C A 1 3 ? 9.151 -2.617 12.696 1.00 42.50 ? 3 C C "C5'" 1
ATOM 46 C "C4'" . C A 1 3 ? 7.653 -2.657 12.817 1.00 39.96 ? 3 C C "C4'" 1
ATOM 47 O "O4'" . C A 1 3 ? 7.165 -1.548 13.613 1.00 39.41 ? 3 C C "O4'" 1
ATOM 48 C "C3'" . C A 1 3 ? 6.877 -2.528 11.522 1.00 37.39 ? 3 C C "C3'" 1
ATOM 49 O "O3'" . C A 1 3 ? 6.866 -3.748 10.833 1.00 37.09 ? 3 C C "O3'" 1
ATOM 50 C "C2'" . C A 1 3 ? 5.500 -2.117 12.029 1.00 34.58 ? 3 C C "C2'" 1
ATOM 51 O "O2'" . C A 1 3 ? 4.858 -3.224 12.646 1.00 28.36 ? 3 C C "O2'" 1
ATOM 52 C "C1'" . C A 1 3 ? 5.884 -1.157 13.147 1.00 34.42 ? 3 C C "C1'" 1
ATOM 53 N N1 . C A 1 3 ? 5.943 0.249 12.686 1.00 31.93 ? 3 C C N1 1
ATOM 54 C C2 . C A 1 3 ? 4.747 0.943 12.521 1.00 34.92 ? 3 C C C2 1
ATOM 55 O O2 . C A 1 3 ? 3.687 0.358 12.759 1.00 37.02 ? 3 C C O2 1
ATOM 56 N N3 . C A 1 3 ? 4.754 2.230 12.089 1.00 38.35 ? 3 C C N3 1
ATOM 57 C C4 . C A 1 3 ? 5.909 2.843 11.832 1.00 37.81 ? 3 C C C4 1
ATOM 58 N N4 . C A 1 3 ? 5.848 4.117 11.429 1.00 32.24 ? 3 C C N4 1
ATOM 59 C C5 . C A 1 3 ? 7.156 2.152 11.984 1.00 35.06 ? 3 C C C5 1
ATOM 60 C C6 . C A 1 3 ? 7.129 0.875 12.399 1.00 34.05 ? 3 C C C6 1
ATOM 61 P P . U A 1 4 ? 7.201 -3.844 9.283 1.00 37.05 ? 4 U C P 1
ATOM 62 O OP1 . U A 1 4 ? 7.514 -5.304 9.147 1.00 34.54 ? 4 U C OP1 1
ATOM 63 O OP2 . U A 1 4 ? 8.123 -2.789 8.774 1.00 40.47 ? 4 U C OP2 1
ATOM 64 O "O5'" . U A 1 4 ? 5.798 -3.542 8.587 1.00 37.72 ? 4 U C "O5'" 1
ATOM 65 C "C5'" . U A 1 4 ? 4.659 -4.343 8.857 1.00 33.83 ? 4 U C "C5'" 1
ATOM 66 C "C4'" . U A 1 4 ? 3.400 -3.681 8.359 1.00 34.31 ? 4 U C "C4'" 1
ATOM 67 O "O4'" . U A 1 4 ? 3.106 -2.513 9.175 1.00 39.31 ? 4 U C "O4'" 1
ATOM 68 C "C3'" . U A 1 4 ? 3.436 -3.144 6.942 1.00 33.39 ? 4 U C "C3'" 1
ATOM 69 O "O3'" . U A 1 4 ? 3.220 -4.146 5.965 1.00 34.30 ? 4 U C "O3'" 1
ATOM 70 C "C2'" . U A 1 4 ? 2.346 -2.080 6.956 1.00 34.47 ? 4 U C "C2'" 1
ATOM 71 O "O2'" . U A 1 4 ? 1.068 -2.649 6.720 1.00 31.79 ? 4 U C "O2'" 1
ATOM 72 C "C1'" . U A 1 4 ? 2.424 -1.550 8.403 1.00 35.41 ? 4 U C "C1'" 1
ATOM 73 N N1 . U A 1 4 ? 3.191 -0.284 8.463 1.00 32.24 ? 4 U C N1 1
ATOM 74 C C2 . U A 1 4 ? 2.543 0.905 8.153 1.00 37.42 ? 4 U C C2 1
ATOM 75 O O2 . U A 1 4 ? 1.353 0.960 7.860 1.00 42.53 ? 4 U C O2 1
ATOM 76 N N3 . U A 1 4 ? 3.323 2.036 8.207 1.00 33.33 ? 4 U C N3 1
ATOM 77 C C4 . U A 1 4 ? 4.658 2.089 8.490 1.00 36.39 ? 4 U C C4 1
ATOM 78 O O4 . U A 1 4 ? 5.232 3.177 8.482 1.00 34.76 ? 4 U C O4 1
ATOM 79 C C5 . U A 1 4 ? 5.247 0.814 8.782 1.00 40.68 ? 4 U C C5 1
ATOM 80 C C6 . U A 1 4 ? 4.526 -0.308 8.754 1.00 34.43 ? 4 U C C6 1
HETATM 81 P P . LCG A 1 5 ? 4.334 -4.407 4.848 1.00 38.46 ? 5 LCG C P 1
HETATM 82 O OP1 . LCG A 1 5 ? 3.919 -5.938 4.290 1.00 54.21 ? 5 LCG C OP1 1
HETATM 83 O "O5'" . LCG A 1 5 ? 4.104 -3.341 3.664 1.00 43.83 ? 5 LCG C "O5'" 1
HETATM 84 C "C5'" . LCG A 1 5 ? 2.940 -3.608 2.929 1.00 40.32 ? 5 LCG C "C5'" 1
HETATM 85 C "C3'" . LCG A 1 5 ? 2.981 -1.128 1.924 1.00 31.03 ? 5 LCG C "C3'" 1
HETATM 86 C "C6'" . LCG A 1 5 ? 0.991 -2.222 1.836 1.00 33.17 ? 5 LCG C "C6'" 1
HETATM 87 N N9 . LCG A 1 5 ? 2.685 0.585 4.293 1.00 39.46 ? 5 LCG C N9 1
HETATM 88 C C8 . LCG A 1 5 ? 3.893 0.219 4.759 1.00 36.43 ? 5 LCG C C8 1
HETATM 89 C C4 . LCG A 1 5 ? 2.613 1.930 4.360 1.00 38.61 ? 5 LCG C C4 1
HETATM 90 N N7 . LCG A 1 5 ? 4.565 1.313 5.123 1.00 32.43 ? 5 LCG C N7 1
HETATM 91 C C5 . LCG A 1 5 ? 3.808 2.393 4.896 1.00 36.17 ? 5 LCG C C5 1
HETATM 92 C C6 . LCG A 1 5 ? 4.009 3.851 5.082 1.00 33.34 ? 5 LCG C C6 1
HETATM 93 C "C2'" . LCG A 1 5 ? 1.769 -0.173 2.256 1.00 32.47 ? 5 LCG C "C2'" 1
HETATM 94 O O6 . LCG A 1 5 ? 5.069 4.309 5.553 1.00 32.49 ? 5 LCG C O6 1
HETATM 95 C "C4'" . LCG A 1 5 ? 2.252 -2.291 2.752 1.00 37.97 ? 5 LCG C "C4'" 1
HETATM 96 C "C1'" . LCG A 1 5 ? 1.643 -0.293 3.730 1.00 34.20 ? 5 LCG C "C1'" 1
HETATM 97 C C2 . LCG A 1 5 ? 1.779 4.271 4.203 1.00 30.66 ? 5 LCG C C2 1
HETATM 98 N N1 . LCG A 1 5 ? 2.983 4.750 4.717 1.00 34.20 ? 5 LCG C N1 1
HETATM 99 O "O4'" . LCG A 1 5 ? 1.946 -1.670 3.938 1.00 36.34 ? 5 LCG C "O4'" 1
HETATM 100 O OP2 . LCG A 1 5 ? 5.974 -4.330 5.265 1.00 44.25 ? 5 LCG C OP2 1
HETATM 101 N N2 . LCG A 1 5 ? 0.736 5.206 3.830 1.00 46.60 ? 5 LCG C N2 1
HETATM 102 N N3 . LCG A 1 5 ? 1.579 2.878 4.016 1.00 37.67 ? 5 LCG C N3 1
HETATM 103 O "O2'" . LCG A 1 5 ? 0.713 -0.866 1.740 1.00 30.06 ? 5 LCG C "O2'" 1
HETATM 104 O "O3'" . LCG A 1 5 ? 2.985 -1.510 0.574 1.00 32.55 ? 5 LCG C "O3'" 1
ATOM 105 P P . C A 1 6 ? 4.025 -0.903 -0.476 1.00 34.58 ? 6 C C P 1
ATOM 106 O OP1 . C A 1 6 ? 4.015 -1.775 -1.668 1.00 42.03 ? 6 C C OP1 1
ATOM 107 O OP2 . C A 1 6 ? 5.315 -0.625 0.189 1.00 35.84 ? 6 C C OP2 1
ATOM 108 O "O5'" . C A 1 6 ? 3.419 0.541 -0.792 1.00 38.61 ? 6 C C "O5'" 1
ATOM 109 C "C5'" . C A 1 6 ? 2.051 0.721 -1.138 1.00 36.39 ? 6 C C "C5'" 1
ATOM 110 C "C4'" . C A 1 6 ? 1.665 2.182 -1.108 1.00 32.98 ? 6 C C "C4'" 1
ATOM 111 O "O4'" . C A 1 6 ? 1.739 2.664 0.255 1.00 32.08 ? 6 C C "O4'" 1
ATOM 112 C "C3'" . C A 1 6 ? 2.567 3.137 -1.882 1.00 34.04 ? 6 C C "C3'" 1
ATOM 113 O "O3'" . C A 1 6 ? 2.312 3.180 -3.276 1.00 31.45 ? 6 C C "O3'" 1
ATOM 114 C "C2'" . C A 1 6 ? 2.322 4.467 -1.176 1.00 34.25 ? 6 C C "C2'" 1
ATOM 115 O "O2'" . C A 1 6 ? 1.115 5.074 -1.606 1.00 34.51 ? 6 C C "O2'" 1
ATOM 116 C "C1'" . C A 1 6 ? 2.161 4.012 0.273 1.00 33.58 ? 6 C C "C1'" 1
ATOM 117 N N1 . C A 1 6 ? 3.459 4.094 0.979 1.00 33.28 ? 6 C C N1 1
ATOM 118 C C2 . C A 1 6 ? 3.895 5.353 1.398 1.00 34.26 ? 6 C C C2 1
ATOM 119 O O2 . C A 1 6 ? 3.126 6.308 1.200 1.00 35.11 ? 6 C C O2 1
ATOM 120 N N3 . C A 1 6 ? 5.106 5.497 2.009 1.00 37.57 ? 6 C C N3 1
ATOM 121 C C4 . C A 1 6 ? 5.874 4.415 2.214 1.00 40.71 ? 6 C C C4 1
ATOM 122 N N4 . C A 1 6 ? 7.053 4.540 2.835 1.00 34.11 ? 6 C C N4 1
ATOM 123 C C5 . C A 1 6 ? 5.446 3.127 1.767 1.00 40.18 ? 6 C C C5 1
ATOM 124 C C6 . C A 1 6 ? 4.254 3.002 1.148 1.00 34.58 ? 6 C C C6 1
ATOM 125 P P . C A 1 7 ? 3.533 3.375 -4.307 1.00 32.69 ? 7 C C P 1
ATOM 126 O OP1 . C A 1 7 ? 2.983 3.250 -5.675 1.00 33.34 ? 7 C C OP1 1
ATOM 127 O OP2 . C A 1 7 ? 4.627 2.430 -3.961 1.00 35.82 ? 7 C C OP2 1
ATOM 128 O "O5'" . C A 1 7 ? 4.164 4.807 -3.943 1.00 38.21 ? 7 C C "O5'" 1
ATOM 129 C "C5'" . C A 1 7 ? 3.539 6.019 -4.305 1.00 38.28 ? 7 C C "C5'" 1
ATOM 130 C "C4'" . C A 1 7 ? 4.005 7.226 -3.509 1.00 41.96 ? 7 C C "C4'" 1
ATOM 131 O "O4'" . C A 1 7 ? 4.254 6.920 -2.109 1.00 44.27 ? 7 C C "O4'" 1
ATOM 132 C "C3'" . C A 1 7 ? 5.274 7.956 -3.919 1.00 35.42 ? 7 C C "C3'" 1
ATOM 133 O "O3'" . C A 1 7 ? 5.157 8.701 -5.118 1.00 35.85 ? 7 C C "O3'" 1
ATOM 134 C "C2'" . C A 1 7 ? 5.473 8.869 -2.714 1.00 35.78 ? 7 C C "C2'" 1
ATOM 135 O "O2'" . C A 1 7 ? 4.527 9.921 -2.750 1.00 35.68 ? 7 C C "O2'" 1
ATOM 136 C "C1'" . C A 1 7 ? 5.083 7.937 -1.565 1.00 40.11 ? 7 C C "C1'" 1
ATOM 137 N N1 . C A 1 7 ? 6.281 7.358 -0.910 1.00 38.06 ? 7 C C N1 1
ATOM 138 C C2 . C A 1 7 ? 7.088 8.230 -0.178 1.00 41.75 ? 7 C C C2 1
ATOM 139 O O2 . C A 1 7 ? 6.736 9.415 -0.107 1.00 36.45 ? 7 C C O2 1
ATOM 140 N N3 . C A 1 7 ? 8.213 7.766 0.439 1.00 44.38 ? 7 C C N3 1
ATOM 141 C C4 . C A 1 7 ? 8.536 6.473 0.335 1.00 42.11 ? 7 C C C4 1
ATOM 142 N N4 . C A 1 7 ? 9.638 6.017 0.932 1.00 36.58 ? 7 C C N4 1
ATOM 143 C C5 . C A 1 7 ? 7.726 5.575 -0.407 1.00 38.40 ? 7 C C C5 1
ATOM 144 C C6 . C A 1 7 ? 6.630 6.050 -1.017 1.00 37.73 ? 7 C C C6 1
ATOM 145 P P . U A 1 8 ? 6.474 9.135 -5.960 1.00 39.39 ? 8 U C P 1
ATOM 146 O OP1 . U A 1 8 ? 6.030 9.902 -7.161 1.00 39.95 ? 8 U C OP1 1
ATOM 147 O OP2 . U A 1 8 ? 7.393 7.951 -6.003 1.00 39.96 ? 8 U C OP2 1
ATOM 148 O "O5'" . U A 1 8 ? 7.280 10.155 -5.047 1.00 40.60 ? 8 U C "O5'" 1
ATOM 149 C "C5'" . U A 1 8 ? 6.733 11.409 -4.692 1.00 41.84 ? 8 U C "C5'" 1
ATOM 150 C "C4'" . U A 1 8 ? 7.729 12.181 -3.888 1.00 38.82 ? 8 U C "C4'" 1
ATOM 151 O "O4'" . U A 1 8 ? 8.042 11.464 -2.668 1.00 38.52 ? 8 U C "O4'" 1
ATOM 152 C "C3'" . U A 1 8 ? 9.073 12.365 -4.554 1.00 39.82 ? 8 U C "C3'" 1
ATOM 153 O "O3'" . U A 1 8 ? 9.046 13.433 -5.467 1.00 40.42 ? 8 U C "O3'" 1
ATOM 154 C "C2'" . U A 1 8 ? 10.000 12.622 -3.379 1.00 40.35 ? 8 U C "C2'" 1
ATOM 155 O "O2'" . U A 1 8 ? 9.888 13.979 -2.977 1.00 41.51 ? 8 U C "O2'" 1
ATOM 156 C "C1'" . U A 1 8 ? 9.373 11.744 -2.290 1.00 43.28 ? 8 U C "C1'" 1
ATOM 157 N N1 . U A 1 8 ? 10.092 10.471 -2.064 1.00 47.93 ? 8 U C N1 1
ATOM 158 C C2 . U A 1 8 ? 11.156 10.540 -1.176 1.00 49.28 ? 8 U C C2 1
ATOM 159 O O2 . U A 1 8 ? 11.492 11.597 -0.655 1.00 48.23 ? 8 U C O2 1
ATOM 160 N N3 . U A 1 8 ? 11.805 9.342 -0.955 1.00 49.77 ? 8 U C N3 1
ATOM 161 C C4 . U A 1 8 ? 11.499 8.105 -1.515 1.00 51.09 ? 8 U C C4 1
ATOM 162 O O4 . U A 1 8 ? 12.178 7.113 -1.205 1.00 55.55 ? 8 U C O4 1
ATOM 163 C C5 . U A 1 8 ? 10.375 8.117 -2.412 1.00 49.20 ? 8 U C C5 1
ATOM 164 C C6 . U A 1 8 ? 9.727 9.275 -2.656 1.00 49.09 ? 8 U C C6 1
ATOM 165 P P . G A 1 9 ? 10.042 13.435 -6.709 1.00 42.59 ? 9 G C P 1
ATOM 166 O OP1 . G A 1 9 ? 9.518 14.436 -7.679 1.00 51.03 ? 9 G C OP1 1
ATOM 167 O OP2 . G A 1 9 ? 10.354 12.061 -7.189 1.00 46.85 ? 9 G C OP2 1
ATOM 168 O "O5'" . G A 1 9 ? 11.402 13.939 -6.070 1.00 47.06 ? 9 G C "O5'" 1
ATOM 169 C "C5'" . G A 1 9 ? 11.524 15.240 -5.533 1.00 42.81 ? 9 G C "C5'" 1
ATOM 170 C "C4'" . G A 1 9 ? 12.904 15.389 -4.992 1.00 43.66 ? 9 G C "C4'" 1
ATOM 171 O "O4'" . G A 1 9 ? 13.004 14.528 -3.848 1.00 50.47 ? 9 G C "O4'" 1
ATOM 172 C "C3'" . G A 1 9 ? 13.994 14.892 -5.922 1.00 50.27 ? 9 G C "C3'" 1
ATOM 173 O "O3'" . G A 1 9 ? 14.429 15.893 -6.815 1.00 53.72 ? 9 G C "O3'" 1
ATOM 174 C "C2'" . G A 1 9 ? 15.084 14.473 -4.972 1.00 53.80 ? 9 G C "C2'" 1
ATOM 175 O "O2'" . G A 1 9 ? 15.769 15.638 -4.532 1.00 60.84 ? 9 G C "O2'" 1
ATOM 176 C "C1'" . G A 1 9 ? 14.274 13.941 -3.796 1.00 54.12 ? 9 G C "C1'" 1
ATOM 177 N N9 . G A 1 9 ? 14.133 12.469 -3.758 1.00 55.52 ? 9 G C N9 1
ATOM 178 C C8 . G A 1 9 ? 13.198 11.624 -4.332 1.00 50.81 ? 9 G C C8 1
ATOM 179 N N7 . G A 1 9 ? 13.406 10.363 -4.019 1.00 45.20 ? 9 G C N7 1
ATOM 180 C C5 . G A 1 9 ? 14.529 10.387 -3.179 1.00 46.84 ? 9 G C C5 1
ATOM 181 C C6 . G A 1 9 ? 15.253 9.349 -2.518 1.00 42.01 ? 9 G C C6 1
ATOM 182 O O6 . G A 1 9 ? 15.020 8.138 -2.526 1.00 41.32 ? 9 G C O6 1
ATOM 183 N N1 . G A 1 9 ? 16.329 9.844 -1.778 1.00 42.80 ? 9 G C N1 1
ATOM 184 C C2 . G A 1 9 ? 16.667 11.171 -1.679 1.00 43.60 ? 9 G C C2 1
ATOM 185 N N2 . G A 1 9 ? 17.730 11.480 -0.944 1.00 44.30 ? 9 G C N2 1
ATOM 186 N N3 . G A 1 9 ? 16.021 12.147 -2.282 1.00 43.73 ? 9 G C N3 1
ATOM 187 C C4 . G A 1 9 ? 14.975 11.681 -3.006 1.00 51.83 ? 9 G C C4 1
HETATM 188 O O . HOH B 2 . ? 7.655 4.106 6.109 1.00 43.77 ? 101 HOH C O 1
HETATM 189 O O . HOH B 2 . ? 1.705 -0.560 14.443 1.00 24.72 ? 102 HOH C O 1
HETATM 190 O O . HOH B 2 . ? 8.008 6.054 10.626 1.00 36.75 ? 103 HOH C O 1
HETATM 191 O O . HOH B 2 . ? 16.571 15.113 -1.637 1.00 49.18 ? 104 HOH C O 1
HETATM 192 O O . HOH B 2 . ? 8.563 1.835 3.104 1.00 41.69 ? 105 HOH C O 1
HETATM 193 O O . HOH B 2 . ? 0.000 7.638 0.000 0.50 37.64 ? 106 HOH C O 1
HETATM 194 O O . HOH B 2 . ? 6.736 2.678 -2.203 1.00 43.88 ? 107 HOH C O 1
HETATM 195 O O . HOH B 2 . ? 10.718 2.908 10.603 1.00 38.54 ? 108 HOH C O 1
#
loop_
_atom_site_anisotrop.id
_atom_site_anisotrop.type_symbol
_atom_site_anisotrop.pdbx_label_atom_id
_atom_site_anisotrop.pdbx_label_alt_id
_atom_site_anisotrop.pdbx_label_comp_id
_atom_site_anisotrop.pdbx_label_asym_id
_atom_site_anisotrop.pdbx_label_seq_id
_atom_site_anisotrop.pdbx_PDB_ins_code
_atom_site_anisotrop.U[1][1]
_atom_site_anisotrop.U[2][2]
_atom_site_anisotrop.U[3][3]
_atom_site_anisotrop.U[1][2]
_atom_site_anisotrop.U[1][3]
_atom_site_anisotrop.U[2][3]
_atom_site_anisotrop.pdbx_auth_seq_id
_atom_site_anisotrop.pdbx_auth_comp_id
_atom_site_anisotrop.pdbx_auth_asym_id
_atom_site_anisotrop.pdbx_auth_atom_id
1 O "O5'" . G A 1 ? 0.6714 0.7820 0.8068 -0.0541 -0.0319 0.0233 1 G C "O5'"
2 C "C5'" . G A 1 ? 0.6054 0.7350 0.7428 -0.0524 -0.0329 0.0259 1 G C "C5'"
3 C "C4'" . G A 1 ? 0.5300 0.6505 0.6532 -0.0458 -0.0328 0.0143 1 G C "C4'"
4 O "O4'" . G A 1 ? 0.4869 0.5828 0.6069 -0.0516 -0.0375 0.0049 1 G C "O4'"
5 C "C3'" . G A 1 ? 0.5047 0.6201 0.6124 -0.0337 -0.0263 0.0083 1 G C "C3'"
6 O "O3'" . G A 1 ? 0.4490 0.5867 0.5548 -0.0254 -0.0218 0.0135 1 G C "O3'"
7 C "C2'" . G A 1 ? 0.4849 0.5808 0.5803 -0.0317 -0.0285 -0.0051 1 G C "C2'"
8 O "O2'" . G A 1 ? 0.4458 0.5543 0.5398 -0.0296 -0.0301 -0.0062 1 G C "O2'"
9 C "C1'" . G A 1 ? 0.4916 0.5717 0.5951 -0.0435 -0.0349 -0.0067 1 G C "C1'"
10 N N9 . G A 1 ? 0.4663 0.5240 0.5659 -0.0448 -0.0342 -0.0115 1 G C N9
11 C C8 . G A 1 ? 0.4619 0.5159 0.5717 -0.0520 -0.0352 -0.0051 1 G C C8
12 N N7 . G A 1 ? 0.4565 0.4888 0.5600 -0.0517 -0.0343 -0.0115 1 G C N7
13 C C5 . G A 1 ? 0.4669 0.4875 0.5549 -0.0440 -0.0327 -0.0229 1 G C C5
14 C C6 . G A 1 ? 0.4739 0.4705 0.5494 -0.0403 -0.0313 -0.0335 1 G C C6
15 O O6 . G A 1 ? 0.4661 0.4466 0.5418 -0.0432 -0.0311 -0.0350 1 G C O6
16 N N1 . G A 1 ? 0.4107 0.4028 0.4727 -0.0326 -0.0299 -0.0428 1 G C N1
17 C C2 . G A 1 ? 0.4850 0.4939 0.5457 -0.0288 -0.0299 -0.0419 1 G C C2
18 N N2 . G A 1 ? 0.4611 0.4628 0.5078 -0.0211 -0.0284 -0.0517 1 G C N2
19 N N3 . G A 1 ? 0.4731 0.5046 0.5454 -0.0322 -0.0313 -0.0320 1 G C N3
20 C C4 . G A 1 ? 0.4593 0.4953 0.5448 -0.0398 -0.0327 -0.0229 1 G C C4
21 P P . C A 2 ? 0.5067 0.6457 0.6018 -0.0138 -0.0141 0.0127 2 C C P
22 O OP1 . C A 2 ? 0.5122 0.6770 0.6083 -0.0073 -0.0108 0.0194 2 C C OP1
23 O OP2 . C A 2 ? 0.5340 0.6633 0.6330 -0.0169 -0.0127 0.0161 2 C C OP2
24 O "O5'" . C A 2 ? 0.4949 0.6137 0.5727 -0.0068 -0.0131 -0.0014 2 C C "O5'"
25 C "C5'" . C A 2 ? 0.4336 0.5573 0.5041 -0.0021 -0.0138 -0.0070 2 C C "C5'"
26 C "C4'" . C A 2 ? 0.3941 0.4980 0.4480 0.0053 -0.0118 -0.0196 2 C C "C4'"
27 O "O4'" . C A 2 ? 0.3888 0.4684 0.4417 -0.0019 -0.0163 -0.0272 2 C C "O4'"
28 C "C3'" . C A 2 ? 0.4180 0.5161 0.4631 0.0138 -0.0055 -0.0210 2 C C "C3'"
29 O "O3'" . C A 2 ? 0.3716 0.4879 0.4118 0.0239 -0.0002 -0.0179 2 C C "O3'"
30 C "C2'" . C A 2 ? 0.4586 0.5305 0.4908 0.0160 -0.0061 -0.0342 2 C C "C2'"
31 O "O2'" . C A 2 ? 0.4898 0.5636 0.5115 0.0230 -0.0056 -0.0412 2 C C "O2'"
32 C "C1'" . C A 2 ? 0.4765 0.5363 0.5169 0.0040 -0.0131 -0.0358 2 C C "C1'"
33 N N1 . C A 2 ? 0.4329 0.4792 0.4790 -0.0024 -0.0138 -0.0337 2 C C N1
34 C C2 . C A 2 ? 0.4347 0.4566 0.4706 -0.0003 -0.0127 -0.0430 2 C C C2
35 O O2 . C A 2 ? 0.4525 0.4648 0.4751 0.0068 -0.0112 -0.0526 2 C C O2
36 N N3 . C A 2 ? 0.4373 0.4462 0.4780 -0.0059 -0.0134 -0.0416 2 C C N3
37 C C4 . C A 2 ? 0.4478 0.4673 0.5030 -0.0135 -0.0151 -0.0311 2 C C C4
38 N N4 . C A 2 ? 0.4206 0.4262 0.4799 -0.0188 -0.0157 -0.0301 2 C C N4
39 C C5 . C A 2 ? 0.4223 0.4669 0.4883 -0.0158 -0.0161 -0.0212 2 C C C5
40 C C6 . C A 2 ? 0.4275 0.4848 0.4884 -0.0101 -0.0154 -0.0229 2 C C C6
41 P P . C A 3 ? 0.4705 0.5911 0.5067 0.0320 0.0066 -0.0141 3 C C P
42 O OP1 . C A 3 ? 0.5307 0.6707 0.5616 0.0419 0.0106 -0.0122 3 C C OP1
43 O OP2 . C A 3 ? 0.5175 0.6428 0.5663 0.0252 0.0064 -0.0042 3 C C OP2
44 O "O5'" . C A 3 ? 0.3658 0.4600 0.3884 0.0365 0.0085 -0.0253 3 C C "O5'"
45 C "C5'" . C A 3 ? 0.5071 0.5922 0.5153 0.0444 0.0098 -0.0359 3 C C "C5'"
46 C "C4'" . C A 3 ? 0.4868 0.5469 0.4844 0.0473 0.0117 -0.0448 3 C C "C4'"
47 O "O4'" . C A 3 ? 0.4851 0.5256 0.4867 0.0374 0.0066 -0.0487 3 C C "O4'"
48 C "C3'" . C A 3 ? 0.4547 0.5142 0.4519 0.0511 0.0166 -0.0406 3 C C "C3'"
49 O "O3'" . C A 3 ? 0.4500 0.5206 0.4388 0.0626 0.0223 -0.0405 3 C C "O3'"
50 C "C2'" . C A 3 ? 0.4308 0.4620 0.4211 0.0491 0.0157 -0.0498 3 C C "C2'"
51 O "O2'" . C A 3 ? 0.3611 0.3805 0.3361 0.0576 0.0177 -0.0606 3 C C "O2'"
52 C "C1'" . C A 3 ? 0.4290 0.4520 0.4268 0.0379 0.0088 -0.0514 3 C C "C1'"
53 N N1 . C A 3 ? 0.3929 0.4157 0.4044 0.0278 0.0062 -0.0436 3 C C N1
54 C C2 . C A 3 ? 0.4380 0.4407 0.4481 0.0250 0.0064 -0.0467 3 C C C2
55 O O2 . C A 3 ? 0.4745 0.4603 0.4719 0.0311 0.0088 -0.0558 3 C C O2
56 N N3 . C A 3 ? 0.4776 0.4794 0.5001 0.0158 0.0040 -0.0397 3 C C N3
57 C C4 . C A 3 ? 0.4600 0.4803 0.4962 0.0093 0.0014 -0.0298 3 C C C4
58 N N4 . C A 3 ? 0.3862 0.4043 0.4343 0.0002 -0.0010 -0.0233 3 C C N4
59 C C5 . C A 3 ? 0.4176 0.4590 0.4556 0.0120 0.0012 -0.0263 3 C C C5
60 C C6 . C A 3 ? 0.4087 0.4508 0.4343 0.0212 0.0036 -0.0333 3 C C C6
61 P P . U A 4 ? 0.4407 0.5318 0.4350 0.0668 0.0272 -0.0296 4 U C P
62 O OP1 . U A 4 ? 0.4083 0.5112 0.3928 0.0783 0.0311 -0.0321 4 U C OP1
63 O OP2 . U A 4 ? 0.4734 0.5802 0.4841 0.0580 0.0247 -0.0178 4 U C OP2
64 O "O5'" . U A 4 ? 0.4565 0.5305 0.4461 0.0689 0.0305 -0.0318 4 U C "O5'"
65 C "C5'" . U A 4 ? 0.4182 0.4744 0.3930 0.0768 0.0333 -0.0424 4 U C "C5'"
66 C "C4'" . U A 4 ? 0.4305 0.4688 0.4041 0.0752 0.0348 -0.0438 4 U C "C4'"
67 O "O4'" . U A 4 ? 0.4977 0.5191 0.4770 0.0643 0.0294 -0.0464 4 U C "O4'"
68 C "C3'" . U A 4 ? 0.4122 0.4625 0.3942 0.0746 0.0378 -0.0332 4 U C "C3'"
69 O "O3'" . U A 4 ? 0.4228 0.4828 0.3976 0.0857 0.0440 -0.0319 4 U C "O3'"
70 C "C2'" . U A 4 ? 0.4324 0.4610 0.4163 0.0681 0.0363 -0.0355 4 U C "C2'"
71 O "O2'" . U A 4 ? 0.4079 0.4204 0.3795 0.0757 0.0403 -0.0429 4 U C "O2'"
72 C "C1'" . U A 4 ? 0.4487 0.4628 0.4338 0.0599 0.0301 -0.0421 4 U C "C1'"
73 N N1 . U A 4 ? 0.4011 0.4221 0.4018 0.0481 0.0253 -0.0340 4 U C N1
74 C C2 . U A 4 ? 0.4684 0.4774 0.4759 0.0406 0.0239 -0.0316 4 U C C2
75 O O2 . U A 4 ? 0.5408 0.5333 0.5418 0.0432 0.0263 -0.0360 4 U C O2
76 N N3 . U A 4 ? 0.4092 0.4258 0.4313 0.0299 0.0194 -0.0238 4 U C N3
77 C C4 . U A 4 ? 0.4390 0.4741 0.4697 0.0262 0.0165 -0.0181 4 U C C4
78 O O4 . U A 4 ? 0.4122 0.4524 0.4562 0.0164 0.0125 -0.0112 4 U C O4
79 C C5 . U A 4 ? 0.4921 0.5388 0.5147 0.0345 0.0184 -0.0211 4 U C C5
80 C C6 . U A 4 ? 0.4200 0.4597 0.4284 0.0450 0.0227 -0.0287 4 U C C6
81 P P . LCG A 5 ? 0.4630 0.5526 0.4456 0.0888 0.0468 -0.0200 5 LCG C P
82 O OP1 . LCG A 5 ? 0.6657 0.7597 0.6343 0.1035 0.0531 -0.0243 5 LCG C OP1
83 O "O5'" . LCG A 5 ? 0.5263 0.6197 0.5195 0.0839 0.0481 -0.0102 5 LCG C "O5'"
84 C "C5'" . LCG A 5 ? 0.4881 0.5707 0.4733 0.0903 0.0526 -0.0130 5 LCG C "C5'"
85 C "C3'" . LCG A 5 ? 0.3620 0.4458 0.3711 0.0729 0.0492 0.0023 5 LCG C "C3'"
86 C "C6'" . LCG A 5 ? 0.4056 0.4620 0.3928 0.0857 0.0549 -0.0120 5 LCG C "C6'"
87 N N9 . LCG A 5 ? 0.4780 0.5275 0.4938 0.0531 0.0371 -0.0079 5 LCG C N9
88 C C8 . LCG A 5 ? 0.4330 0.4988 0.4523 0.0525 0.0351 -0.0055 5 LCG C C8
89 C C4 . LCG A 5 ? 0.4659 0.5084 0.4927 0.0422 0.0332 -0.0040 5 LCG C C4
90 N N7 . LCG A 5 ? 0.3770 0.4460 0.4093 0.0414 0.0299 -0.0002 5 LCG C N7
91 C C5 . LCG A 5 ? 0.4274 0.4822 0.4647 0.0347 0.0286 0.0009 5 LCG C C5
92 C C6 . LCG A 5 ? 0.3884 0.4391 0.4393 0.0221 0.0235 0.0060 5 LCG C C6
93 C "C2'" . LCG A 5 ? 0.3892 0.4465 0.3979 0.0665 0.0470 -0.0030 5 LCG C "C2'"
94 O O6 . LCG A 5 ? 0.3708 0.4322 0.4315 0.0151 0.0192 0.0105 5 LCG C O6
95 C "C4'" . LCG A 5 ? 0.4606 0.5289 0.4531 0.0814 0.0506 -0.0110 5 LCG C "C4'"
96 C "C1'" . LCG A 5 ? 0.4183 0.4597 0.4213 0.0637 0.0428 -0.0132 5 LCG C "C1'"
97 C C2 . LCG A 5 ? 0.3671 0.3886 0.4093 0.0253 0.0281 0.0007 5 LCG C C2
98 N N1 . LCG A 5 ? 0.4041 0.4383 0.4571 0.0178 0.0234 0.0058 5 LCG C N1
99 O "O4'" . LCG A 5 ? 0.4462 0.4958 0.4389 0.0737 0.0455 -0.0177 5 LCG C "O4'"
100 O OP2 . LCG A 5 ? 0.5255 0.6373 0.5183 0.0840 0.0432 -0.0134 5 LCG C OP2
101 N N2 . LCG A 5 ? 0.5737 0.5785 0.6183 0.0208 0.0280 0.0005 5 LCG C N2
102 N N3 . LCG A 5 ? 0.4589 0.4844 0.4881 0.0374 0.0330 -0.0042 5 LCG C N3
103 O "O2'" . LCG A 5 ? 0.3658 0.4135 0.3629 0.0755 0.0519 -0.0081 5 LCG C "O2'"
104 O "O3'" . LCG A 5 ? 0.3764 0.4748 0.3856 0.0797 0.0546 0.0092 5 LCG C "O3'"
105 P P . C A 6 ? 0.3889 0.5123 0.4126 0.0758 0.0551 0.0236 6 C C P
106 O OP1 . C A 6 ? 0.4798 0.6181 0.4989 0.0864 0.0613 0.0277 6 C C OP1
107 O OP2 . C A 6 ? 0.3973 0.5342 0.4303 0.0693 0.0506 0.0277 6 C C OP2
108 O "O5'" . C A 6 ? 0.4409 0.5521 0.4739 0.0661 0.0529 0.0276 6 C C "O5'"
109 C "C5'" . C A 6 ? 0.4214 0.5131 0.4480 0.0681 0.0552 0.0228 6 C C "C5'"
110 C "C4'" . C A 6 ? 0.3790 0.4585 0.4157 0.0569 0.0516 0.0259 6 C C "C4'"
111 O "O4'" . C A 6 ? 0.3718 0.4373 0.4098 0.0490 0.0457 0.0195 6 C C "O4'"
112 C "C3'" . C A 6 ? 0.3807 0.4790 0.4335 0.0495 0.0504 0.0393 6 C C "C3'"
113 O "O3'" . C A 6 ? 0.3440 0.4518 0.3990 0.0536 0.0551 0.0468 6 C C "O3'"
114 C "C2'" . C A 6 ? 0.3860 0.4682 0.4472 0.0372 0.0446 0.0384 6 C C "C2'"
115 O "O2'" . C A 6 ? 0.3957 0.4602 0.4554 0.0357 0.0458 0.0366 6 C C "O2'"
116 C "C1'" . C A 6 ? 0.3854 0.4525 0.4379 0.0372 0.0413 0.0267 6 C C "C1'"
117 N N1 . C A 6 ? 0.3745 0.4554 0.4345 0.0321 0.0371 0.0298 6 C C N1
118 C C2 . C A 6 ? 0.3832 0.4623 0.4563 0.0199 0.0315 0.0341 6 C C C2
119 O O2 . C A 6 ? 0.3974 0.4622 0.4744 0.0142 0.0304 0.0346 6 C C O2
120 N N3 . C A 6 ? 0.4182 0.5103 0.4990 0.0148 0.0275 0.0376 6 C C N3
121 C C4 . C A 6 ? 0.4548 0.5616 0.5306 0.0215 0.0290 0.0366 6 C C C4
122 N N4 . C A 6 ? 0.3645 0.4839 0.4478 0.0166 0.0250 0.0397 6 C C N4
123 C C5 . C A 6 ? 0.4516 0.5608 0.5143 0.0340 0.0347 0.0323 6 C C C5
124 C C6 . C A 6 ? 0.3874 0.4838 0.4427 0.0390 0.0387 0.0291 6 C C C6
125 P P . C A 7 ? 0.3458 0.4832 0.4130 0.0526 0.0565 0.0609 7 C C P
126 O OP1 . C A 7 ? 0.3528 0.4954 0.4185 0.0586 0.0620 0.0660 7 C C OP1
127 O OP2 . C A 7 ? 0.3801 0.5356 0.4453 0.0573 0.0567 0.0613 7 C C OP2
128 O "O5'" . C A 7 ? 0.4100 0.5487 0.4933 0.0386 0.0505 0.0677 7 C C "O5'"
129 C "C5'" . C A 7 ? 0.4120 0.5396 0.5029 0.0309 0.0491 0.0711 7 C C "C5'"
130 C "C4'" . C A 7 ? 0.4563 0.5788 0.5592 0.0178 0.0423 0.0732 7 C C "C4'"
131 O "O4'" . C A 7 ? 0.4899 0.6037 0.5883 0.0160 0.0382 0.0645 7 C C "O4'"
132 C "C3'" . C A 7 ? 0.3606 0.5054 0.4798 0.0105 0.0400 0.0859 7 C C "C3'"
133 O "O3'" . C A 7 ? 0.3606 0.5127 0.4887 0.0080 0.0420 0.0959 7 C C "O3'"
134 C "C2'" . C A 7 ? 0.3671 0.4995 0.4930 -0.0007 0.0330 0.0827 7 C C "C2'"
135 O "O2'" . C A 7 ? 0.3711 0.4842 0.5003 -0.0074 0.0311 0.0815 7 C C "O2'"
136 C "C1'" . C A 7 ? 0.4315 0.5494 0.5433 0.0046 0.0323 0.0695 7 C C "C1'"
137 N N1 . C A 7 ? 0.3999 0.5331 0.5130 0.0052 0.0303 0.0699 7 C C N1
138 C C2 . C A 7 ? 0.4419 0.5777 0.5666 -0.0055 0.0242 0.0730 7 C C C2
139 O O2 . C A 7 ? 0.3758 0.5005 0.5088 -0.0147 0.0208 0.0750 7 C C O2
140 N N3 . C A 7 ? 0.4700 0.6197 0.5965 -0.0055 0.0221 0.0737 7 C C N3
141 C C4 . C A 7 ? 0.4405 0.6016 0.5577 0.0047 0.0259 0.0713 7 C C C4
142 N N4 . C A 7 ? 0.3653 0.5402 0.4844 0.0047 0.0238 0.0720 7 C C N4
143 C C5 . C A 7 ? 0.3983 0.5571 0.5038 0.0156 0.0321 0.0681 7 C C C5
144 C C6 . C A 7 ? 0.3949 0.5400 0.4987 0.0155 0.0341 0.0676 7 C C C6
145 P P . U A 8 ? 0.3909 0.5718 0.5340 0.0042 0.0420 0.1107 8 U C P
146 O OP1 . U A 8 ? 0.3951 0.5780 0.5451 0.0021 0.0444 0.1190 8 U C OP1
147 O OP2 . U A 8 ? 0.3929 0.5939 0.5314 0.0124 0.0446 0.1116 8 U C OP2
148 O "O5'" . U A 8 ? 0.4020 0.5829 0.5579 -0.0083 0.0349 0.1134 8 U C "O5'"
149 C "C5'" . U A 8 ? 0.4211 0.5845 0.5840 -0.0186 0.0305 0.1128 8 U C "C5'"
150 C "C4'" . U A 8 ? 0.3771 0.5456 0.5521 -0.0291 0.0241 0.1162 8 U C "C4'"
151 O "O4'" . U A 8 ? 0.3773 0.5413 0.5448 -0.0272 0.0217 0.1072 8 U C "O4'"
152 C "C3'" . U A 8 ? 0.3761 0.5730 0.5640 -0.0315 0.0242 0.1292 8 U C "C3'"
153 O "O3'" . U A 8 ? 0.3781 0.5798 0.5781 -0.0377 0.0241 0.1394 8 U C "O3'"
154 C "C2'" . U A 8 ? 0.3801 0.5791 0.5739 -0.0386 0.0181 0.1278 8 U C "C2'"
155 O "O2'" . U A 8 ? 0.3948 0.5825 0.5997 -0.0507 0.0126 0.1297 8 U C "O2'"
156 C "C1'" . U A 8 ? 0.4283 0.6093 0.6067 -0.0331 0.0178 0.1135 8 U C "C1'"
157 N N1 . U A 8 ? 0.4849 0.6804 0.6558 -0.0246 0.0201 0.1112 8 U C N1
158 C C2 . U A 8 ? 0.4973 0.7010 0.6741 -0.0297 0.0154 0.1118 8 U C C2
159 O O2 . U A 8 ? 0.4817 0.6813 0.6694 -0.0405 0.0099 0.1143 8 U C O2
160 N N3 . U A 8 ? 0.5015 0.7183 0.6711 -0.0217 0.0175 0.1095 8 U C N3
161 C C4 . U A 8 ? 0.5206 0.7428 0.6779 -0.0094 0.0236 0.1066 8 U C C4
162 O O4 . U A 8 ? 0.5749 0.8089 0.7269 -0.0034 0.0247 0.1047 8 U C O4
163 C C5 . U A 8 ? 0.5015 0.7144 0.6534 -0.0048 0.0281 0.1060 8 U C C5
164 C C6 . U A 8 ? 0.5021 0.7023 0.6608 -0.0124 0.0263 0.1084 8 U C C6
165 P P . G A 9 ? 0.3923 0.6235 0.6024 -0.0362 0.0273 0.1536 9 G C P
166 O OP1 . G A 9 ? 0.4973 0.7261 0.7157 -0.0408 0.0282 0.1611 9 G C OP1
167 O OP2 . G A 9 ? 0.4443 0.6911 0.6447 -0.0241 0.0328 0.1531 9 G C OP2
168 O "O5'" . G A 9 ? 0.4400 0.6851 0.6629 -0.0449 0.0218 0.1594 9 G C "O5'"
169 C "C5'" . G A 9 ? 0.3850 0.6214 0.6200 -0.0574 0.0156 0.1617 9 G C "C5'"
170 C "C4'" . G A 9 ? 0.3869 0.6400 0.6320 -0.0628 0.0114 0.1668 9 G C "C4'"
171 O "O4'" . G A 9 ? 0.4790 0.7252 0.7135 -0.0590 0.0100 0.1562 9 G C "O4'"
172 C "C3'" . G A 9 ? 0.4589 0.7419 0.7092 -0.0583 0.0150 0.1776 9 G C "C3'"
173 O "O3'" . G A 9 ? 0.4933 0.7890 0.7587 -0.0650 0.0145 0.1904 9 G C "O3'"
174 C "C2'" . G A 9 ? 0.4999 0.7926 0.7517 -0.0596 0.0116 0.1759 9 G C "C2'"
175 O "O2'" . G A 9 ? 0.5832 0.8782 0.8502 -0.0718 0.0054 0.1817 9 G C "O2'"
176 C "C1'" . G A 9 ? 0.5165 0.7855 0.7543 -0.0568 0.0101 0.1610 9 G C "C1'"
177 N N9 . G A 9 ? 0.5383 0.8103 0.7608 -0.0444 0.0148 0.1540 9 G C N9
178 C C8 . G A 9 ? 0.4851 0.7510 0.6944 -0.0340 0.0206 0.1490 9 G C C8
179 N N7 . G A 9 ? 0.4161 0.6870 0.6141 -0.0248 0.0231 0.1431 9 G C N7
180 C C5 . G A 9 ? 0.4316 0.7123 0.6357 -0.0295 0.0187 0.1442 9 G C C5
181 C C6 . G A 9 ? 0.3695 0.6593 0.5673 -0.0241 0.0186 0.1399 9 G C C6
182 O O6 . G A 9 ? 0.3648 0.6555 0.5496 -0.0136 0.0226 0.1338 9 G C O6
183 N N1 . G A 9 ? 0.3733 0.6713 0.5815 -0.0324 0.0131 0.1432 9 G C N1
184 C C2 . G A 9 ? 0.3787 0.6761 0.6018 -0.0443 0.0082 0.1498 9 G C C2
185 N N2 . G A 9 ? 0.3818 0.6879 0.6136 -0.0510 0.0032 0.1523 9 G C N2
186 N N3 . G A 9 ? 0.3810 0.6702 0.6103 -0.0495 0.0081 0.1539 9 G C N3
187 C C4 . G A 9 ? 0.4896 0.7709 0.7088 -0.0416 0.0135 0.1508 9 G C C4
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