HEADER DNA/RNA 29-JUL-14 4U6L
TITLE CRYSTAL STRUCTURE OF DNA/RNA DUPLEX OBTAINED IN THE PRESENCE OF
TITLE 2 [CO(NH3)6]CL3 AND SRCL2
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: RNA (5'-R(*GP*AP*AP*GP*AP*AP*GP*AP*G)-3');
COMPND 3 CHAIN: A;
COMPND 4 ENGINEERED: YES;
COMPND 5 MOL_ID: 2;
COMPND 6 MOLECULE: DNA (5'-D(*(5CM)P*TP*CP*TP*TP*CP*TP*TP*(5CM))-3');
COMPND 7 CHAIN: B;
COMPND 8 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 SYNTHETIC: YES;
SOURCE 3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT;
SOURCE 4 ORGANISM_TAXID: 32630;
SOURCE 5 MOL_ID: 2;
SOURCE 6 SYNTHETIC: YES;
SOURCE 7 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT;
SOURCE 8 ORGANISM_TAXID: 32630
KEYWDS DNA/RNA HYBRID DUPLEX, ANTISENSE, DNA-RNA COMPLEX
EXPDTA X-RAY DIFFRACTION
AUTHOR J.KONDO,Y.NOMURA,Y.KITAHARA,S.OBIKA,H.TORIGOE
REVDAT 4 26-JUN-24 4U6L 1 REMARK
REVDAT 3 06-JUL-22 4U6L 1 JRNL LINK
REVDAT 2 29-JAN-20 4U6L 1 REMARK
REVDAT 1 19-AUG-15 4U6L 0
JRNL AUTH J.KONDO,Y.NOMURA,Y.KITAHARA,S.OBIKA,H.TORIGOE
JRNL TITL THE CRYSTAL STRUCTURE OF A 2',4'-BNA(NC)[N-ME]-MODIFIED
JRNL TITL 2 ANTISENSE GAPMER IN COMPLEX WITH THE TARGET RNA.
JRNL REF CHEM.COMMUN.(CAMB.) V. 52 2354 2016
JRNL REFN ESSN 1364-548X
JRNL PMID 26731288
JRNL DOI 10.1039/C5CC08300A
REMARK 2
REMARK 2 RESOLUTION. 1.90 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : CNS
REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-
REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,
REMARK 3 : READ,RICE,SIMONSON,WARREN
REMARK 3
REMARK 3 REFINEMENT TARGET : NULL
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.02
REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000
REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL
REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL
REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.8
REMARK 3 NUMBER OF REFLECTIONS : 4975
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE
REMARK 3 FREE R VALUE TEST SET SELECTION : NULL
REMARK 3 R VALUE (WORKING SET) : 0.251
REMARK 3 FREE R VALUE : 0.275
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.400
REMARK 3 FREE R VALUE TEST SET COUNT : 517
REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : NULL
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90
REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.97
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0
REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 449
REMARK 3 BIN R VALUE (WORKING SET) : 0.3450
REMARK 3 BIN FREE R VALUE : 0.3465
REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL
REMARK 3 BIN FREE R VALUE TEST SET COUNT : 52
REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 0
REMARK 3 NUCLEIC ACID ATOMS : 374
REMARK 3 HETEROGEN ATOMS : 9
REMARK 3 SOLVENT ATOMS : 60
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.12
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : 0.42700
REMARK 3 B22 (A**2) : 0.42700
REMARK 3 B33 (A**2) : -0.85400
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL
REMARK 3 ESD FROM SIGMAA (A) : NULL
REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL
REMARK 3
REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL
REMARK 3 ESD FROM C-V SIGMAA (A) : NULL
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES.
REMARK 3 BOND LENGTHS (A) : 0.006
REMARK 3 BOND ANGLES (DEGREES) : NULL
REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL
REMARK 3 IMPROPER ANGLES (DEGREES) : NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL MODEL : NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA
REMARK 3 MAIN-CHAIN BOND (A**2) : 1.724 ; 1.500
REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.328 ; 2.000
REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL
REMARK 3
REMARK 3 BULK SOLVENT MODELING.
REMARK 3 METHOD USED : NULL
REMARK 3 KSOL : NULL
REMARK 3 BSOL : 69.65
REMARK 3
REMARK 3 NCS MODEL : NULL
REMARK 3
REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT
REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL
REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL
REMARK 3
REMARK 3 PARAMETER FILE 1 : NCO_XPLOR.PARAM
REMARK 3 PARAMETER FILE 2 : DNA-RNA_201312.PARAM
REMARK 3 PARAMETER FILE 3 : CNS_TOPPAR:WATER_REP.PARAM
REMARK 3 PARAMETER FILE 4 : CNS_TOPPAR:ION.PARAM
REMARK 3 PARAMETER FILE 5 : NULL
REMARK 3 TOPOLOGY FILE 1 : NULL
REMARK 3 TOPOLOGY FILE 2 : NULL
REMARK 3 TOPOLOGY FILE 3 : NULL
REMARK 3 TOPOLOGY FILE 4 : NULL
REMARK 3 TOPOLOGY FILE 5 : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 4U6L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-AUG-14.
REMARK 100 THE DEPOSITION ID IS D_1000202902.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 27-OCT-13
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 7.0
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : PHOTON FACTORY
REMARK 200 BEAMLINE : BL-5A
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 1.60366, 1.60546, 1.0
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTALCLEAR
REMARK 200 DATA SCALING SOFTWARE : D*TREK
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 4976
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900
REMARK 200 RESOLUTION RANGE LOW (A) : 42.020
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8
REMARK 200 DATA REDUNDANCY : 10.76
REMARK 200 R MERGE (I) : 0.03000
REMARK 200 R SYM (I) : NULL
REMARK 200 FOR THE DATA SET : 32.6000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97
REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0
REMARK 200 DATA REDUNDANCY IN SHELL : 10.83
REMARK 200 R MERGE FOR SHELL (I) : 0.31600
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 FOR SHELL : 6.400
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: MAD
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD
REMARK 200 SOFTWARE USED: PHENIX, SOLVE
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 59.18
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.01
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: NA CACODYLATE, HEXAMMINE COBALT
REMARK 280 CHLORIDE, SRCL2, MPD, PH 7.0, VAPOR DIFFUSION, HANGING DROP,
REMARK 280 TEMPERATURE 293K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -Y,X-Y,Z+1/3
REMARK 290 3555 -X+Y,-X,Z+2/3
REMARK 290 4555 -X,-Y,Z+1/2
REMARK 290 5555 Y,-X+Y,Z+5/6
REMARK 290 6555 X-Y,X,Z+1/6
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 15.50667
REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 31.01333
REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 23.26000
REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 38.76667
REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 7.75333
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 1890 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 3540 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 O HOH A 215 O HOH A 226 1.72
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION
REMARK 500 A A 2 P A A 2 OP1 0.120
REMARK 500 A A 2 P A A 2 OP2 0.123
REMARK 500 A A 3 P A A 3 OP1 0.107
REMARK 500 A A 3 P A A 3 OP2 0.126
REMARK 500 G A 4 P G A 4 OP1 0.127
REMARK 500 G A 4 P G A 4 OP2 0.123
REMARK 500 A A 5 P A A 5 OP1 0.120
REMARK 500 A A 5 P A A 5 OP2 0.127
REMARK 500 A A 5 P A A 5 O5' 0.063
REMARK 500 A A 6 P A A 6 OP1 0.124
REMARK 500 A A 6 P A A 6 OP2 0.131
REMARK 500 G A 7 P G A 7 OP1 0.117
REMARK 500 G A 7 P G A 7 OP2 0.130
REMARK 500 A A 8 P A A 8 OP1 0.125
REMARK 500 A A 8 P A A 8 OP2 0.123
REMARK 500 G A 9 P G A 9 OP1 0.110
REMARK 500 G A 9 P G A 9 OP2 0.103
REMARK 500 G A 9 P G A 9 O5' 0.061
REMARK 500 DT B 2 P DT B 2 OP1 0.116
REMARK 500 DT B 2 P DT B 2 OP2 0.125
REMARK 500 DC B 3 P DC B 3 OP1 0.112
REMARK 500 DC B 3 P DC B 3 OP2 0.121
REMARK 500 DT B 4 P DT B 4 OP1 0.118
REMARK 500 DT B 4 P DT B 4 OP2 0.122
REMARK 500 DT B 5 P DT B 5 OP1 0.115
REMARK 500 DT B 5 P DT B 5 OP2 0.117
REMARK 500 DC B 6 P DC B 6 OP1 0.103
REMARK 500 DC B 6 P DC B 6 OP2 0.121
REMARK 500 DT B 7 P DT B 7 OP1 0.111
REMARK 500 DT B 7 P DT B 7 OP2 0.110
REMARK 500 DT B 8 P DT B 8 OP1 0.113
REMARK 500 DT B 8 P DT B 8 OP2 0.125
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3
REMARK 500 G A 4 O5' - P - OP2 ANGL. DEV. = -5.5 DEGREES
REMARK 500
REMARK 500 REMARK: NULL
REMARK 525
REMARK 525 SOLVENT
REMARK 525
REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT
REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST
REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT
REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE
REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER;
REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE
REMARK 525 NUMBER; I=INSERTION CODE):
REMARK 525
REMARK 525 M RES CSSEQI
REMARK 525 HOH B 227 DISTANCE = 6.02 ANGSTROMS
REMARK 525 HOH B 228 DISTANCE = 8.69 ANGSTROMS
REMARK 525 HOH B 229 DISTANCE = 10.40 ANGSTROMS
REMARK 525 HOH B 233 DISTANCE = 7.41 ANGSTROMS
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 SR A 102 SR
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 HOH A 219 O
REMARK 620 2 HOH A 224 O 111.1
REMARK 620 3 HOH A 225 O 131.4 71.7
REMARK 620 4 HOH A 226 O 108.4 140.5 80.8
REMARK 620 N 1 2 3
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue NCO A 101
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue SR A 102
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 4U6K RELATED DB: PDB
REMARK 900 RELATED ID: 4U6M RELATED DB: PDB
DBREF 4U6L A 1 9 PDB 4U6L 4U6L 1 9
DBREF 4U6L B 1 9 PDB 4U6L 4U6L 1 9
SEQRES 1 A 9 G A A G A A G A G
SEQRES 1 B 9 5CM DT DC DT DT DC DT DT 5CM
HET 5CM B 1 17
HET 5CM B 9 20
HET NCO A 101 7
HET SR A 102 1
HET SR B 101 1
HETNAM 5CM 5-METHYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE
HETNAM NCO COBALT HEXAMMINE(III)
HETNAM SR STRONTIUM ION
FORMUL 2 5CM 2(C10 H16 N3 O7 P)
FORMUL 3 NCO CO H18 N6 3+
FORMUL 4 SR 2(SR 2+)
FORMUL 6 HOH *60(H2 O)
LINK O3' 5CM B 1 P DT B 2 1555 1555 1.61
LINK O3' DT B 8 P 5CM B 9 1555 1555 1.61
LINK SR SR A 102 O HOH A 219 1555 1555 2.84
LINK SR SR A 102 O HOH A 224 1555 1555 2.71
LINK SR SR A 102 O HOH A 225 1555 1555 2.66
LINK SR SR A 102 O HOH A 226 1555 1555 2.88
SITE 1 AC1 5 G A 1 HOH A 208 HOH A 216 DT B 4
SITE 2 AC1 5 DT B 5
SITE 1 AC2 5 HOH A 219 HOH A 223 HOH A 224 HOH A 225
SITE 2 AC2 5 HOH A 226
CRYST1 48.520 48.520 46.520 90.00 90.00 120.00 P 61 6
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.020610 0.011899 0.000000 0.00000
SCALE2 0.000000 0.023798 0.000000 0.00000
SCALE3 0.000000 0.000000 0.021496 0.00000
ATOM 1 O5' G A 1 14.949 10.345 -5.757 1.00 45.21 O
ATOM 2 C5' G A 1 15.142 11.689 -6.192 1.00 43.05 C
ATOM 3 C4' G A 1 15.731 12.584 -5.056 1.00 41.95 C
ATOM 4 O4' G A 1 14.771 12.698 -3.975 1.00 42.56 O
ATOM 5 C3' G A 1 16.996 12.057 -4.403 1.00 41.62 C
ATOM 6 O3' G A 1 18.143 12.397 -5.085 1.00 41.16 O
ATOM 7 C2' G A 1 16.943 12.690 -3.017 1.00 40.94 C
ATOM 8 O2' G A 1 17.415 14.024 -2.979 1.00 40.00 O
ATOM 9 C1' G A 1 15.442 12.660 -2.728 1.00 40.79 C
ATOM 10 N9 G A 1 14.999 11.469 -2.005 1.00 39.02 N
ATOM 11 C8 G A 1 14.283 10.408 -2.501 1.00 39.38 C
ATOM 12 N7 G A 1 14.013 9.504 -1.597 1.00 38.89 N
ATOM 13 C5 G A 1 14.590 9.997 -0.434 1.00 38.71 C
ATOM 14 C6 G A 1 14.620 9.455 0.880 1.00 38.99 C
ATOM 15 O6 G A 1 14.111 8.402 1.290 1.00 38.07 O
ATOM 16 N1 G A 1 15.325 10.280 1.758 1.00 37.46 N
ATOM 17 C2 G A 1 15.918 11.475 1.410 1.00 37.24 C
ATOM 18 N2 G A 1 16.564 12.134 2.377 1.00 37.88 N
ATOM 19 N3 G A 1 15.885 11.988 0.193 1.00 38.03 N
ATOM 20 C4 G A 1 15.211 11.203 -0.670 1.00 38.87 C
ATOM 21 P A A 2 19.340 11.337 -5.186 1.00 40.49 P
ATOM 22 OP1 A A 2 20.448 11.822 -6.241 1.00 42.20 O
ATOM 23 OP2 A A 2 18.790 9.826 -5.210 1.00 41.27 O
ATOM 24 O5' A A 2 20.045 11.398 -3.719 1.00 42.16 O
ATOM 25 C5' A A 2 20.448 12.660 -3.288 1.00 39.56 C
ATOM 26 C4' A A 2 20.634 12.651 -1.755 1.00 39.23 C
ATOM 27 O4' A A 2 19.368 12.301 -1.146 1.00 40.34 O
ATOM 28 C3' A A 2 21.580 11.582 -1.245 1.00 38.46 C
ATOM 29 O3' A A 2 22.900 11.956 -1.294 1.00 40.13 O
ATOM 30 C2' A A 2 21.112 11.410 0.190 1.00 38.16 C
ATOM 31 O2' A A 2 21.602 12.443 1.017 1.00 36.37 O
ATOM 32 C1' A A 2 19.599 11.549 0.031 1.00 36.87 C
ATOM 33 N9 A A 2 18.870 10.287 -0.086 1.00 35.03 N
ATOM 34 C8 A A 2 18.369 9.703 -1.225 1.00 33.32 C
ATOM 35 N7 A A 2 17.722 8.584 -1.005 1.00 30.28 N
ATOM 36 C5 A A 2 17.810 8.412 0.372 1.00 32.91 C
ATOM 37 C6 A A 2 17.319 7.412 1.239 1.00 30.79 C
ATOM 38 N6 A A 2 16.594 6.364 0.836 1.00 32.10 N
ATOM 39 N1 A A 2 17.592 7.538 2.558 1.00 30.70 N
ATOM 40 C2 A A 2 18.296 8.602 2.969 1.00 28.35 C
ATOM 41 N3 A A 2 18.803 9.610 2.253 1.00 31.55 N
ATOM 42 C4 A A 2 18.521 9.451 0.949 1.00 31.66 C
ATOM 43 P A A 3 24.022 10.849 -1.575 1.00 40.82 P
ATOM 44 OP1 A A 3 25.450 11.530 -1.754 1.00 40.23 O
ATOM 45 OP2 A A 3 23.499 9.747 -2.628 1.00 38.32 O
ATOM 46 O5' A A 3 24.098 9.978 -0.185 1.00 38.49 O
ATOM 47 C5' A A 3 24.536 10.685 0.936 1.00 36.82 C
ATOM 48 C4' A A 3 24.142 9.932 2.247 1.00 34.76 C
ATOM 49 O4' A A 3 22.710 9.734 2.271 1.00 33.32 O
ATOM 50 C3' A A 3 24.716 8.536 2.461 1.00 35.58 C
ATOM 51 O3' A A 3 25.995 8.539 3.011 1.00 35.50 O
ATOM 52 C2' A A 3 23.737 7.957 3.471 1.00 33.74 C
ATOM 53 O2' A A 3 24.024 8.394 4.781 1.00 34.12 O
ATOM 54 C1' A A 3 22.410 8.546 2.987 1.00 31.63 C
ATOM 55 N9 A A 3 21.690 7.640 2.095 1.00 28.61 N
ATOM 56 C8 A A 3 21.582 7.693 0.727 1.00 28.36 C
ATOM 57 N7 A A 3 20.854 6.730 0.216 1.00 27.32 N
ATOM 58 C5 A A 3 20.454 5.990 1.322 1.00 24.86 C
ATOM 59 C6 A A 3 19.662 4.834 1.455 1.00 26.43 C
ATOM 60 N6 A A 3 19.083 4.203 0.423 1.00 24.41 N
ATOM 61 N1 A A 3 19.477 4.341 2.702 1.00 25.26 N
ATOM 62 C2 A A 3 20.046 4.978 3.736 1.00 26.01 C
ATOM 63 N3 A A 3 20.801 6.078 3.739 1.00 26.46 N
ATOM 64 C4 A A 3 20.971 6.537 2.486 1.00 27.78 C
ATOM 65 P G A 4 26.963 7.265 2.807 1.00 39.67 P
ATOM 66 OP1 G A 4 28.478 7.657 3.194 1.00 38.09 O
ATOM 67 OP2 G A 4 26.661 6.439 1.461 1.00 34.81 O
ATOM 68 O5' G A 4 26.469 6.174 3.937 1.00 38.41 O
ATOM 69 C5' G A 4 26.768 6.437 5.276 1.00 40.14 C
ATOM 70 C4' G A 4 26.342 5.218 6.171 1.00 42.33 C
ATOM 71 O4' G A 4 24.889 5.114 6.201 1.00 41.34 O
ATOM 72 C3' G A 4 26.809 3.851 5.691 1.00 43.68 C
ATOM 73 O3' G A 4 28.099 3.508 6.046 1.00 47.47 O
ATOM 74 C2' G A 4 25.776 2.929 6.321 1.00 43.10 C
ATOM 75 O2' G A 4 25.991 2.706 7.701 1.00 44.13 O
ATOM 76 C1' G A 4 24.503 3.747 6.108 1.00 40.43 C
ATOM 77 N9 G A 4 23.915 3.528 4.789 1.00 37.45 N
ATOM 78 C8 G A 4 24.063 4.316 3.671 1.00 35.24 C
ATOM 79 N7 G A 4 23.387 3.878 2.642 1.00 34.49 N
ATOM 80 C5 G A 4 22.759 2.729 3.105 1.00 32.31 C
ATOM 81 C6 G A 4 21.880 1.828 2.440 1.00 30.08 C
ATOM 82 O6 G A 4 21.456 1.887 1.279 1.00 28.25 O
ATOM 83 N1 G A 4 21.491 0.779 3.275 1.00 29.89 N
ATOM 84 C2 G A 4 21.895 0.622 4.592 1.00 34.06 C
ATOM 85 N2 G A 4 21.428 -0.458 5.244 1.00 32.18 N
ATOM 86 N3 G A 4 22.702 1.465 5.221 1.00 32.63 N
ATOM 87 C4 G A 4 23.089 2.488 4.425 1.00 35.14 C
ATOM 88 P A A 5 29.058 2.798 4.967 1.00 49.05 P
ATOM 89 OP1 A A 5 30.403 2.306 5.691 1.00 50.80 O
ATOM 90 OP2 A A 5 29.132 3.606 3.574 1.00 50.46 O
ATOM 91 O5' A A 5 28.252 1.429 4.498 1.00 47.58 O
ATOM 92 C5' A A 5 28.083 0.457 5.492 1.00 45.17 C
ATOM 93 C4' A A 5 27.263 -0.771 4.949 1.00 42.47 C
ATOM 94 O4' A A 5 25.909 -0.393 4.599 1.00 38.63 O
ATOM 95 C3' A A 5 27.739 -1.482 3.695 1.00 43.07 C
ATOM 96 O3' A A 5 28.881 -2.261 3.853 1.00 46.24 O
ATOM 97 C2' A A 5 26.516 -2.332 3.366 1.00 40.38 C
ATOM 98 O2' A A 5 26.418 -3.510 4.139 1.00 41.79 O
ATOM 99 C1' A A 5 25.372 -1.379 3.729 1.00 37.84 C
ATOM 100 N9 A A 5 24.840 -0.718 2.538 1.00 34.46 N
ATOM 101 C8 A A 5 25.211 0.482 1.995 1.00 33.41 C
ATOM 102 N7 A A 5 24.588 0.773 0.881 1.00 33.69 N
ATOM 103 C5 A A 5 23.736 -0.306 0.683 1.00 31.51 C
ATOM 104 C6 A A 5 22.809 -0.607 -0.330 1.00 31.64 C
ATOM 105 N6 A A 5 22.576 0.184 -1.378 1.00 30.03 N
ATOM 106 N1 A A 5 22.120 -1.763 -0.227 1.00 31.46 N
ATOM 107 C2 A A 5 22.348 -2.550 0.834 1.00 32.91 C
ATOM 108 N3 A A 5 23.191 -2.372 1.850 1.00 30.79 N
ATOM 109 C4 A A 5 23.866 -1.221 1.709 1.00 33.12 C
ATOM 110 P A A 6 29.808 -2.592 2.575 1.00 50.62 P
ATOM 111 OP1 A A 6 31.191 -3.269 3.043 1.00 48.99 O
ATOM 112 OP2 A A 6 29.816 -1.389 1.496 1.00 47.63 O
ATOM 113 O5' A A 6 28.983 -3.744 1.746 1.00 44.97 O
ATOM 114 C5' A A 6 28.496 -4.798 2.509 1.00 45.33 C
ATOM 115 C4' A A 6 27.407 -5.586 1.717 1.00 44.45 C
ATOM 116 O4' A A 6 26.195 -4.802 1.550 1.00 44.95 O
ATOM 117 C3' A A 6 27.762 -5.985 0.299 1.00 45.04 C
ATOM 118 O3' A A 6 28.618 -7.062 0.234 1.00 46.71 O
ATOM 119 C2' A A 6 26.388 -6.322 -0.262 1.00 43.88 C
ATOM 120 O2' A A 6 25.934 -7.587 0.163 1.00 46.87 O
ATOM 121 C1' A A 6 25.528 -5.217 0.363 1.00 42.27 C
ATOM 122 N9 A A 6 25.415 -4.059 -0.520 1.00 38.01 N
ATOM 123 C8 A A 6 26.226 -2.954 -0.547 1.00 37.56 C
ATOM 124 N7 A A 6 25.902 -2.084 -1.470 1.00 35.31 N
ATOM 125 C5 A A 6 24.805 -2.654 -2.093 1.00 34.60 C
ATOM 126 C6 A A 6 24.009 -2.230 -3.165 1.00 33.69 C
ATOM 127 N6 A A 6 24.223 -1.099 -3.833 1.00 33.96 N
ATOM 128 N1 A A 6 22.979 -3.023 -3.538 1.00 35.08 N
ATOM 129 C2 A A 6 22.784 -4.168 -2.874 1.00 34.29 C
ATOM 130 N3 A A 6 23.474 -4.679 -1.855 1.00 34.84 N
ATOM 131 C4 A A 6 24.484 -3.864 -1.509 1.00 35.90 C
ATOM 132 P G A 7 29.539 -7.275 -1.065 1.00 46.78 P
ATOM 133 OP1 G A 7 30.558 -8.484 -0.805 1.00 46.70 O
ATOM 134 OP2 G A 7 30.071 -5.890 -1.703 1.00 47.95 O
ATOM 135 O5' G A 7 28.501 -7.772 -2.224 1.00 43.96 O
ATOM 136 C5' G A 7 27.724 -8.882 -1.933 1.00 42.28 C
ATOM 137 C4' G A 7 26.579 -9.031 -2.987 1.00 40.70 C
ATOM 138 O4' G A 7 25.662 -7.910 -2.888 1.00 40.02 O
ATOM 139 C3' G A 7 26.985 -9.036 -4.452 1.00 39.73 C
ATOM 140 O3' G A 7 27.394 -10.267 -4.916 1.00 41.00 O
ATOM 141 C2' G A 7 25.670 -8.691 -5.127 1.00 39.20 C
ATOM 142 O2' G A 7 24.853 -9.837 -5.193 1.00 39.92 O
ATOM 143 C1' G A 7 25.100 -7.640 -4.166 1.00 39.24 C
ATOM 144 N9 G A 7 25.482 -6.285 -4.557 1.00 36.15 N
ATOM 145 C8 G A 7 26.506 -5.531 -4.034 1.00 37.38 C
ATOM 146 N7 G A 7 26.629 -4.363 -4.604 1.00 37.31 N
ATOM 147 C5 G A 7 25.620 -4.340 -5.557 1.00 34.73 C
ATOM 148 C6 G A 7 25.255 -3.327 -6.491 1.00 34.12 C
ATOM 149 O6 G A 7 25.777 -2.221 -6.682 1.00 32.10 O
ATOM 150 N1 G A 7 24.168 -3.712 -7.257 1.00 33.64 N
ATOM 151 C2 G A 7 23.518 -4.914 -7.162 1.00 34.00 C
ATOM 152 N2 G A 7 22.490 -5.078 -8.000 1.00 30.70 N
ATOM 153 N3 G A 7 23.851 -5.875 -6.308 1.00 34.51 N
ATOM 154 C4 G A 7 24.900 -5.518 -5.538 1.00 35.27 C
ATOM 155 P A A 8 28.229 -10.370 -6.291 1.00 37.79 P
ATOM 156 OP1 A A 8 28.666 -11.900 -6.535 1.00 41.72 O
ATOM 157 OP2 A A 8 29.311 -9.188 -6.426 1.00 41.47 O
ATOM 158 O5' A A 8 27.159 -9.989 -7.484 1.00 37.86 O
ATOM 159 C5' A A 8 26.248 -10.976 -7.858 1.00 36.61 C
ATOM 160 C4' A A 8 25.439 -10.543 -9.145 1.00 36.70 C
ATOM 161 O4' A A 8 24.544 -9.430 -8.867 1.00 39.58 O
ATOM 162 C3' A A 8 26.222 -10.108 -10.375 1.00 35.78 C
ATOM 163 O3' A A 8 26.698 -11.149 -11.145 1.00 32.29 O
ATOM 164 C2' A A 8 25.167 -9.320 -11.139 1.00 35.95 C
ATOM 165 O2' A A 8 24.243 -10.145 -11.817 1.00 36.55 O
ATOM 166 C1' A A 8 24.494 -8.558 -9.996 1.00 37.29 C
ATOM 167 N9 A A 8 25.239 -7.347 -9.653 1.00 35.42 N
ATOM 168 C8 A A 8 26.136 -7.216 -8.627 1.00 34.49 C
ATOM 169 N7 A A 8 26.687 -6.030 -8.551 1.00 35.38 N
ATOM 170 C5 A A 8 26.108 -5.325 -9.596 1.00 32.48 C
ATOM 171 C6 A A 8 26.287 -4.004 -10.054 1.00 30.12 C
ATOM 172 N6 A A 8 27.107 -3.127 -9.466 1.00 28.10 N
ATOM 173 N1 A A 8 25.581 -3.615 -11.140 1.00 27.97 N
ATOM 174 C2 A A 8 24.739 -4.497 -11.705 1.00 32.26 C
ATOM 175 N3 A A 8 24.478 -5.764 -11.355 1.00 32.94 N
ATOM 176 C4 A A 8 25.209 -6.121 -10.283 1.00 32.66 C
ATOM 177 P G A 9 28.066 -10.972 -11.969 1.00 33.80 P
ATOM 178 OP1 G A 9 28.413 -12.353 -12.687 1.00 33.19 O
ATOM 179 OP2 G A 9 29.177 -10.208 -11.130 1.00 29.58 O
ATOM 180 O5' G A 9 27.727 -9.875 -13.160 1.00 29.64 O
ATOM 181 C5' G A 9 26.828 -10.288 -14.145 1.00 31.66 C
ATOM 182 C4' G A 9 26.592 -9.139 -15.187 1.00 33.11 C
ATOM 183 O4' G A 9 25.926 -8.022 -14.543 1.00 32.61 O
ATOM 184 C3' G A 9 27.833 -8.522 -15.814 1.00 34.12 C
ATOM 185 O3' G A 9 28.474 -9.332 -16.795 1.00 35.94 O
ATOM 186 C2' G A 9 27.315 -7.159 -16.249 1.00 34.54 C
ATOM 187 O2' G A 9 26.526 -7.177 -17.421 1.00 33.53 O
ATOM 188 C1' G A 9 26.431 -6.804 -15.057 1.00 32.12 C
ATOM 189 N9 G A 9 27.196 -6.141 -14.009 1.00 30.88 N
ATOM 190 C8 G A 9 27.773 -6.705 -12.896 1.00 29.08 C
ATOM 191 N7 G A 9 28.425 -5.842 -12.166 1.00 28.33 N
ATOM 192 C5 G A 9 28.259 -4.636 -12.834 1.00 27.72 C
ATOM 193 C6 G A 9 28.741 -3.341 -12.527 1.00 26.62 C
ATOM 194 O6 G A 9 29.459 -2.983 -11.583 1.00 24.68 O
ATOM 195 N1 G A 9 28.324 -2.406 -13.470 1.00 26.71 N
ATOM 196 C2 G A 9 27.562 -2.681 -14.577 1.00 28.46 C
ATOM 197 N2 G A 9 27.280 -1.641 -15.377 1.00 24.92 N
ATOM 198 N3 G A 9 27.113 -3.888 -14.879 1.00 29.12 N
ATOM 199 C4 G A 9 27.495 -4.807 -13.969 1.00 28.40 C
TER 200 G A 9
HETATM 201 N1 5CM B 1 29.535 2.397 -14.302 1.00 33.07 N
HETATM 202 C2 5CM B 1 29.065 1.075 -14.327 1.00 31.97 C
HETATM 203 N3 5CM B 1 29.410 0.232 -13.330 1.00 31.33 N
HETATM 204 C4 5CM B 1 30.180 0.662 -12.330 1.00 33.04 C
HETATM 205 C5 5CM B 1 30.648 2.010 -12.263 1.00 32.96 C
HETATM 206 C5A 5CM B 1 31.478 2.437 -11.094 1.00 35.01 C
HETATM 207 C6 5CM B 1 30.310 2.834 -13.264 1.00 33.38 C
HETATM 208 O2 5CM B 1 28.340 0.712 -15.261 1.00 28.20 O
HETATM 209 N4 5CM B 1 30.517 -0.214 -11.379 1.00 31.67 N
HETATM 210 C1' 5CM B 1 29.191 3.298 -15.417 1.00 35.29 C
HETATM 211 C2' 5CM B 1 27.756 3.818 -15.389 1.00 35.58 C
HETATM 212 C3' 5CM B 1 27.903 5.071 -14.548 1.00 37.43 C
HETATM 213 C4' 5CM B 1 29.242 5.616 -15.032 1.00 36.62 C
HETATM 214 O4' 5CM B 1 30.039 4.441 -15.328 1.00 35.18 O
HETATM 215 O3' 5CM B 1 26.847 6.005 -14.802 1.00 36.58 O
HETATM 216 C5' 5CM B 1 29.962 6.509 -14.050 1.00 38.82 C
HETATM 217 O5' 5CM B 1 30.117 5.879 -12.779 1.00 39.63 O
ATOM 218 P DT B 2 25.447 5.858 -14.024 1.00 36.78 P
ATOM 219 OP1 DT B 2 24.385 6.941 -14.537 1.00 35.10 O
ATOM 220 OP2 DT B 2 25.652 5.603 -12.448 1.00 36.51 O
ATOM 221 O5' DT B 2 24.859 4.405 -14.487 1.00 34.06 O
ATOM 222 C5' DT B 2 24.340 4.206 -15.800 1.00 34.24 C
ATOM 223 C4' DT B 2 23.827 2.793 -15.945 1.00 35.21 C
ATOM 224 O4' DT B 2 24.915 1.857 -15.776 1.00 33.57 O
ATOM 225 C3' DT B 2 22.816 2.357 -14.894 1.00 35.27 C
ATOM 226 O3' DT B 2 21.501 2.802 -15.208 1.00 39.85 O
ATOM 227 C2' DT B 2 22.904 0.850 -14.997 1.00 35.74 C
ATOM 228 C1' DT B 2 24.405 0.652 -15.187 1.00 33.67 C
ATOM 229 N1 DT B 2 25.112 0.422 -13.917 1.00 32.16 N
ATOM 230 C2 DT B 2 25.095 -0.854 -13.407 1.00 31.45 C
ATOM 231 O2 DT B 2 24.491 -1.771 -13.932 1.00 31.06 O
ATOM 232 N3 DT B 2 25.807 -1.017 -12.253 1.00 30.79 N
ATOM 233 C4 DT B 2 26.513 -0.054 -11.566 1.00 31.13 C
ATOM 234 O4 DT B 2 27.143 -0.363 -10.564 1.00 31.30 O
ATOM 235 C5 DT B 2 26.452 1.275 -12.128 1.00 30.14 C
ATOM 236 C7 DT B 2 27.147 2.395 -11.417 1.00 31.43 C
ATOM 237 C6 DT B 2 25.769 1.443 -13.267 1.00 29.87 C
ATOM 238 P DC B 3 20.505 3.200 -14.013 1.00 40.35 P
ATOM 239 OP1 DC B 3 19.185 3.894 -14.584 1.00 42.98 O
ATOM 240 OP2 DC B 3 21.315 3.859 -12.793 1.00 40.54 O
ATOM 241 O5' DC B 3 20.050 1.773 -13.348 1.00 40.92 O
ATOM 242 C5' DC B 3 19.396 0.786 -14.136 1.00 40.27 C
ATOM 243 C4' DC B 3 19.551 -0.576 -13.504 1.00 39.17 C
ATOM 244 O4' DC B 3 20.945 -0.905 -13.324 1.00 39.68 O
ATOM 245 C3' DC B 3 18.982 -0.716 -12.101 1.00 38.61 C
ATOM 246 O3' DC B 3 17.566 -0.857 -12.126 1.00 38.98 O
ATOM 247 C2' DC B 3 19.659 -1.986 -11.635 1.00 37.13 C
ATOM 248 C1' DC B 3 21.058 -1.825 -12.233 1.00 36.70 C
ATOM 249 N1 DC B 3 22.024 -1.291 -11.262 1.00 33.35 N
ATOM 250 C2 DC B 3 22.568 -2.175 -10.337 1.00 32.55 C
ATOM 251 O2 DC B 3 22.191 -3.351 -10.356 1.00 31.73 O
ATOM 252 N3 DC B 3 23.473 -1.730 -9.434 1.00 32.20 N
ATOM 253 C4 DC B 3 23.827 -0.447 -9.428 1.00 30.05 C
ATOM 254 N4 DC B 3 24.725 -0.054 -8.516 1.00 27.45 N
ATOM 255 C5 DC B 3 23.273 0.491 -10.356 1.00 30.07 C
ATOM 256 C6 DC B 3 22.383 0.027 -11.250 1.00 32.08 C
ATOM 257 P DT B 4 16.713 -0.436 -10.835 1.00 39.45 P
ATOM 258 OP1 DT B 4 15.149 -0.449 -11.186 1.00 41.81 O
ATOM 259 OP2 DT B 4 17.364 0.814 -10.062 1.00 38.98 O
ATOM 260 O5' DT B 4 16.985 -1.656 -9.762 1.00 37.68 O
ATOM 261 C5' DT B 4 16.579 -2.994 -10.062 1.00 36.35 C
ATOM 262 C4' DT B 4 16.930 -3.925 -8.924 1.00 35.06 C
ATOM 263 O4' DT B 4 18.359 -4.085 -8.807 1.00 35.80 O
ATOM 264 C3' DT B 4 16.491 -3.471 -7.542 1.00 34.34 C
ATOM 265 O3' DT B 4 15.124 -3.790 -7.309 1.00 35.46 O
ATOM 266 C2' DT B 4 17.403 -4.281 -6.646 1.00 34.60 C
ATOM 267 C1' DT B 4 18.707 -4.266 -7.434 1.00 33.30 C
ATOM 268 N1 DT B 4 19.620 -3.175 -7.051 1.00 32.50 N
ATOM 269 C2 DT B 4 20.494 -3.409 -6.012 1.00 31.26 C
ATOM 270 O2 DT B 4 20.525 -4.462 -5.392 1.00 33.21 O
ATOM 271 N3 DT B 4 21.331 -2.365 -5.723 1.00 29.47 N
ATOM 272 C4 DT B 4 21.384 -1.136 -6.357 1.00 28.45 C
ATOM 273 O4 DT B 4 22.204 -0.309 -6.003 1.00 26.16 O
ATOM 274 C5 DT B 4 20.429 -0.948 -7.428 1.00 28.90 C
ATOM 275 C7 DT B 4 20.406 0.359 -8.159 1.00 28.07 C
ATOM 276 C6 DT B 4 19.603 -1.965 -7.716 1.00 28.26 C
ATOM 277 P DT B 5 14.295 -2.955 -6.214 1.00 32.37 P
ATOM 278 OP1 DT B 5 12.749 -3.348 -6.334 1.00 34.35 O
ATOM 279 OP2 DT B 5 14.744 -1.417 -6.206 1.00 34.12 O
ATOM 280 O5' DT B 5 14.850 -3.512 -4.760 1.00 34.59 O
ATOM 281 C5' DT B 5 14.593 -4.869 -4.361 1.00 31.66 C
ATOM 282 C4' DT B 5 15.450 -5.268 -3.181 1.00 30.90 C
ATOM 283 O4' DT B 5 16.858 -5.191 -3.491 1.00 29.88 O
ATOM 284 C3' DT B 5 15.305 -4.452 -1.901 1.00 30.68 C
ATOM 285 O3' DT B 5 14.139 -4.831 -1.165 1.00 30.77 O
ATOM 286 C2' DT B 5 16.572 -4.825 -1.158 1.00 29.38 C
ATOM 287 C1' DT B 5 17.593 -4.907 -2.294 1.00 30.01 C
ATOM 288 N1 DT B 5 18.329 -3.648 -2.502 1.00 28.30 N
ATOM 289 C2 DT B 5 19.502 -3.474 -1.811 1.00 28.00 C
ATOM 290 O2 DT B 5 19.952 -4.298 -1.032 1.00 28.22 O
ATOM 291 N3 DT B 5 20.140 -2.292 -2.062 1.00 27.57 N
ATOM 292 C4 DT B 5 19.734 -1.286 -2.913 1.00 28.00 C
ATOM 293 O4 DT B 5 20.423 -0.285 -3.031 1.00 28.28 O
ATOM 294 C5 DT B 5 18.492 -1.525 -3.604 1.00 28.29 C
ATOM 295 C7 DT B 5 17.973 -0.485 -4.549 1.00 27.83 C
ATOM 296 C6 DT B 5 17.854 -2.682 -3.365 1.00 29.87 C
ATOM 297 P DC B 6 13.537 -3.824 -0.052 1.00 29.80 P
ATOM 298 OP1 DC B 6 12.131 -4.337 0.478 1.00 31.35 O
ATOM 299 OP2 DC B 6 13.734 -2.285 -0.465 1.00 27.13 O
ATOM 300 O5' DC B 6 14.562 -3.948 1.207 1.00 29.84 O
ATOM 301 C5' DC B 6 14.676 -5.166 1.929 1.00 30.84 C
ATOM 302 C4' DC B 6 15.656 -4.998 3.063 1.00 30.98 C
ATOM 303 O4' DC B 6 16.997 -4.831 2.549 1.00 31.78 O
ATOM 304 C3' DC B 6 15.417 -3.749 3.901 1.00 29.61 C
ATOM 305 O3' DC B 6 14.398 -3.990 4.869 1.00 31.15 O
ATOM 306 C2' DC B 6 16.775 -3.551 4.538 1.00 31.01 C
ATOM 307 C1' DC B 6 17.703 -3.909 3.374 1.00 31.37 C
ATOM 308 N1 DC B 6 18.073 -2.759 2.539 1.00 28.57 N
ATOM 309 C2 DC B 6 19.190 -2.024 2.903 1.00 28.86 C
ATOM 310 O2 DC B 6 19.818 -2.365 3.925 1.00 27.46 O
ATOM 311 N3 DC B 6 19.564 -0.970 2.148 1.00 27.89 N
ATOM 312 C4 DC B 6 18.862 -0.646 1.058 1.00 28.75 C
ATOM 313 N4 DC B 6 19.277 0.405 0.338 1.00 28.88 N
ATOM 314 C5 DC B 6 17.708 -1.379 0.660 1.00 28.05 C
ATOM 315 C6 DC B 6 17.348 -2.418 1.426 1.00 29.68 C
ATOM 316 P DT B 7 13.368 -2.813 5.259 1.00 31.54 P
ATOM 317 OP1 DT B 7 12.326 -3.400 6.316 1.00 31.86 O
ATOM 318 OP2 DT B 7 12.853 -1.949 4.021 1.00 29.23 O
ATOM 319 O5' DT B 7 14.284 -1.741 6.054 1.00 29.58 O
ATOM 320 C5' DT B 7 14.957 -2.127 7.250 1.00 30.73 C
ATOM 321 C4' DT B 7 15.994 -1.100 7.623 1.00 28.82 C
ATOM 322 O4' DT B 7 16.989 -1.016 6.583 1.00 29.58 O
ATOM 323 C3' DT B 7 15.473 0.322 7.771 1.00 28.07 C
ATOM 324 O3' DT B 7 14.936 0.512 9.081 1.00 29.02 O
ATOM 325 C2' DT B 7 16.739 1.125 7.582 1.00 27.92 C
ATOM 326 C1' DT B 7 17.478 0.320 6.512 1.00 27.86 C
ATOM 327 N1 DT B 7 17.272 0.826 5.132 1.00 23.83 N
ATOM 328 C2 DT B 7 18.133 1.812 4.716 1.00 24.28 C
ATOM 329 O2 DT B 7 19.022 2.250 5.426 1.00 22.24 O
ATOM 330 N3 DT B 7 17.919 2.268 3.433 1.00 22.10 N
ATOM 331 C4 DT B 7 16.961 1.834 2.540 1.00 23.99 C
ATOM 332 O4 DT B 7 16.915 2.324 1.402 1.00 23.16 O
ATOM 333 C5 DT B 7 16.080 0.793 3.044 1.00 24.34 C
ATOM 334 C7 DT B 7 15.002 0.259 2.148 1.00 26.67 C
ATOM 335 C6 DT B 7 16.278 0.348 4.302 1.00 24.76 C
ATOM 336 P DT B 8 13.869 1.687 9.352 1.00 30.37 P
ATOM 337 OP1 DT B 8 13.246 1.482 10.809 1.00 30.75 O
ATOM 338 OP2 DT B 8 12.912 2.003 8.096 1.00 29.23 O
ATOM 339 O5' DT B 8 14.762 3.059 9.415 1.00 28.29 O
ATOM 340 C5' DT B 8 15.784 3.221 10.398 1.00 27.85 C
ATOM 341 C4' DT B 8 16.647 4.414 10.065 1.00 28.04 C
ATOM 342 O4' DT B 8 17.372 4.181 8.836 1.00 29.98 O
ATOM 343 C3' DT B 8 15.900 5.725 9.842 1.00 26.83 C
ATOM 344 O3' DT B 8 15.730 6.407 11.092 1.00 29.69 O
ATOM 345 C2' DT B 8 16.852 6.499 8.955 1.00 27.39 C
ATOM 346 C1' DT B 8 17.523 5.409 8.129 1.00 28.52 C
ATOM 347 N1 DT B 8 16.923 5.245 6.798 1.00 24.77 N
ATOM 348 C2 DT B 8 17.444 6.009 5.786 1.00 26.52 C
ATOM 349 O2 DT B 8 18.363 6.785 5.960 1.00 26.76 O
ATOM 350 N3 DT B 8 16.854 5.825 4.563 1.00 24.99 N
ATOM 351 C4 DT B 8 15.825 4.959 4.261 1.00 25.16 C
ATOM 352 O4 DT B 8 15.406 4.882 3.111 1.00 28.34 O
ATOM 353 C5 DT B 8 15.322 4.185 5.378 1.00 24.81 C
ATOM 354 C7 DT B 8 14.204 3.222 5.141 1.00 26.73 C
ATOM 355 C6 DT B 8 15.889 4.368 6.578 1.00 25.93 C
HETATM 356 N1 5CM B 9 16.164 9.888 6.586 1.00 28.12 N
HETATM 357 C2 5CM B 9 16.165 10.120 5.201 1.00 28.86 C
HETATM 358 N3 5CM B 9 15.381 9.366 4.409 1.00 27.66 N
HETATM 359 C4 5CM B 9 14.592 8.436 4.945 1.00 29.98 C
HETATM 360 C5 5CM B 9 14.526 8.220 6.356 1.00 29.54 C
HETATM 361 C5A 5CM B 9 13.563 7.210 6.903 1.00 30.49 C
HETATM 362 C6 5CM B 9 15.330 8.952 7.128 1.00 28.19 C
HETATM 363 O2 5CM B 9 16.877 11.024 4.739 1.00 28.90 O
HETATM 364 N4 5CM B 9 13.867 7.706 4.123 1.00 29.14 N
HETATM 365 C1' 5CM B 9 17.078 10.660 7.435 1.00 27.98 C
HETATM 366 C2' 5CM B 9 16.483 11.977 7.942 1.00 29.93 C
HETATM 367 C3' 5CM B 9 15.889 11.565 9.274 1.00 29.96 C
HETATM 368 C4' 5CM B 9 16.911 10.551 9.776 1.00 28.56 C
HETATM 369 O4' 5CM B 9 17.364 9.866 8.587 1.00 30.18 O
HETATM 370 O3' 5CM B 9 15.713 12.651 10.186 1.00 29.32 O
HETATM 371 C5' 5CM B 9 16.431 9.563 10.813 1.00 29.15 C
HETATM 372 O5' 5CM B 9 15.281 8.853 10.341 1.00 26.75 O
HETATM 373 P 5CM B 9 14.644 7.591 11.216 1.00 27.75 P
HETATM 374 OP1 5CM B 9 14.584 8.049 12.749 1.00 27.34 O
HETATM 375 OP2 5CM B 9 13.294 7.277 10.414 1.00 25.66 O
TER 376 5CM B 9
HETATM 377 CO NCO A 101 11.191 6.547 -0.752 1.00 79.58 CO
HETATM 378 N1 NCO A 101 11.401 8.416 -1.352 1.00 79.84 N
HETATM 379 N2 NCO A 101 13.064 6.238 -0.547 1.00 79.64 N
HETATM 380 N3 NCO A 101 11.143 6.017 -2.650 1.00 79.58 N
HETATM 381 N4 NCO A 101 11.162 7.116 1.116 1.00 79.84 N
HETATM 382 N5 NCO A 101 10.901 4.698 -0.198 1.00 79.53 N
HETATM 383 N6 NCO A 101 9.260 6.814 -0.862 1.00 79.68 N
HETATM 384 SR SR A 102 24.020 4.826 -1.957 1.00 51.16 SR2+
HETATM 385 SR SR B 101 24.902 9.288 -18.147 1.00101.05 SR2+
HETATM 386 O HOH A 201 22.858 -9.723 -6.189 1.00 39.65 O
HETATM 387 O HOH A 202 24.398 -9.441 0.359 1.00 57.48 O
HETATM 388 O HOH A 203 27.434 -5.441 5.843 1.00 32.38 O
HETATM 389 O HOH A 204 17.698 14.629 -0.269 1.00 34.70 O
HETATM 390 O HOH A 205 30.763 -11.804 -9.454 1.00 43.14 O
HETATM 391 O HOH A 206 30.671 -4.595 -9.510 1.00 59.53 O
HETATM 392 O HOH A 207 25.214 13.909 -3.391 1.00 32.38 O
HETATM 393 O HOH A 208 9.008 5.545 2.252 1.00 53.10 O
HETATM 394 O HOH A 209 24.068 -5.845 4.280 1.00 32.38 O
HETATM 395 O HOH A 210 30.366 -12.426 -3.582 1.00 31.06 O
HETATM 396 O HOH A 211 31.971 -6.925 -6.557 1.00 43.02 O
HETATM 397 O HOH A 212 30.259 -7.025 4.326 1.00 32.38 O
HETATM 398 O HOH A 213 27.439 3.289 2.056 1.00 49.71 O
HETATM 399 O HOH A 214 19.170 4.925 -2.264 1.00 45.82 O
HETATM 400 O HOH A 215 20.565 5.251 -4.763 1.00 58.54 O
HETATM 401 O HOH A 216 12.715 4.367 1.813 1.00 42.62 O
HETATM 402 O HOH A 217 11.627 1.803 2.292 1.00 43.55 O
HETATM 403 O HOH A 218 29.481 -10.422 0.487 1.00 49.25 O
HETATM 404 O HOH A 219 26.485 3.937 -3.057 1.00 53.10 O
HETATM 405 O HOH A 220 28.956 -6.935 -6.762 1.00 74.08 O
HETATM 406 O HOH A 221 29.350 -1.946 -4.688 1.00 66.00 O
HETATM 407 O HOH A 222 13.835 2.350 -0.869 1.00 44.41 O
HETATM 408 O HOH A 223 25.541 2.473 -0.794 1.00 50.76 O
HETATM 409 O HOH A 224 24.288 5.428 0.674 1.00 32.37 O
HETATM 410 O HOH A 225 22.127 3.531 -0.608 1.00 32.37 O
HETATM 411 O HOH A 226 22.008 4.688 -4.009 1.00 32.37 O
HETATM 412 O HOH B 201 10.935 -4.230 -1.418 1.00 45.94 O
HETATM 413 O HOH B 202 14.920 14.837 9.259 1.00 36.88 O
HETATM 414 O HOH B 203 11.976 6.046 4.222 1.00 39.22 O
HETATM 415 O HOH B 204 11.354 6.047 9.343 1.00 39.14 O
HETATM 416 O HOH B 205 21.292 -7.001 -4.966 1.00 44.27 O
HETATM 417 O HOH B 206 21.982 -3.979 4.195 1.00 48.13 O
HETATM 418 O HOH B 207 16.334 6.546 14.232 1.00 34.76 O
HETATM 419 O HOH B 208 15.119 12.143 12.821 1.00 33.91 O
HETATM 420 O HOH B 209 11.189 4.121 7.266 1.00 32.38 O
HETATM 421 O HOH B 210 13.674 10.537 14.071 1.00 45.51 O
HETATM 422 O HOH B 211 23.994 9.388 -12.311 1.00 49.89 O
HETATM 423 O HOH B 212 11.338 5.946 12.903 1.00 42.68 O
HETATM 424 O HOH B 213 33.736 4.262 -13.068 1.00 50.50 O
HETATM 425 O HOH B 214 9.701 5.215 11.244 1.00 23.63 O
HETATM 426 O HOH B 215 18.192 7.983 -12.077 1.00 32.37 O
HETATM 427 O HOH B 216 28.539 0.466 -8.692 1.00 35.18 O
HETATM 428 O HOH B 217 27.659 6.049 -11.250 1.00 47.57 O
HETATM 429 O HOH B 218 24.186 4.032 -11.311 1.00 37.21 O
HETATM 430 O HOH B 219 17.429 1.078 -1.443 1.00 35.10 O
HETATM 431 O HOH B 220 14.237 0.004 -4.035 1.00 32.33 O
HETATM 432 O HOH B 221 15.262 -0.759 -1.820 1.00 37.98 O
HETATM 433 O HOH B 222 16.621 0.735 -7.490 1.00 44.87 O
HETATM 434 O HOH B 223 11.342 0.514 7.056 1.00 43.72 O
HETATM 435 O HOH B 224 11.312 0.420 4.313 1.00 50.49 O
HETATM 436 O HOH B 225 20.216 2.323 -3.442 1.00 36.08 O
HETATM 437 O HOH B 226 33.001 3.380 -7.978 1.00 52.25 O
HETATM 438 O HOH B 227 7.526 3.028 5.600 1.00 70.86 O
HETATM 439 O HOH B 228 9.366 -4.709 15.506 1.00 63.70 O
HETATM 440 O HOH B 229 10.192 -1.014 20.432 1.00 51.94 O
HETATM 441 O HOH B 230 24.016 9.702 -9.758 1.00 53.30 O
HETATM 442 O HOH B 231 21.717 8.821 -10.608 1.00 32.37 O
HETATM 443 O HOH B 232 8.815 -3.151 4.421 1.00 32.38 O
HETATM 444 O HOH B 233 9.693 -0.359 17.048 1.00 32.38 O
HETATM 445 O HOH B 234 20.444 8.905 -12.934 1.00 32.38 O
CONECT 201 202 207 210
CONECT 202 201 203 208
CONECT 203 202 204
CONECT 204 203 205 209
CONECT 205 204 206 207
CONECT 206 205
CONECT 207 201 205
CONECT 208 202
CONECT 209 204
CONECT 210 201 211 214
CONECT 211 210 212
CONECT 212 211 213 215
CONECT 213 212 214 216
CONECT 214 210 213
CONECT 215 212 218
CONECT 216 213 217
CONECT 217 216
CONECT 218 215
CONECT 344 373
CONECT 356 357 362 365
CONECT 357 356 358 363
CONECT 358 357 359
CONECT 359 358 360 364
CONECT 360 359 361 362
CONECT 361 360
CONECT 362 356 360
CONECT 363 357
CONECT 364 359
CONECT 365 356 366 369
CONECT 366 365 367
CONECT 367 366 368 370
CONECT 368 367 369 371
CONECT 369 365 368
CONECT 370 367
CONECT 371 368 372
CONECT 372 371 373
CONECT 373 344 372 374 375
CONECT 374 373
CONECT 375 373
CONECT 377 378 379 380 381
CONECT 377 382 383
CONECT 378 377
CONECT 379 377
CONECT 380 377
CONECT 381 377
CONECT 382 377
CONECT 383 377
CONECT 384 404 409 410 411
CONECT 404 384
CONECT 409 384
CONECT 410 384
CONECT 411 384
MASTER 351 0 5 0 0 0 4 6 443 2 52 2
END