data_4TTK
#
_entry.id 4TTK
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.398
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 4TTK pdb_00004ttk 10.2210/pdb4ttk/pdb
WWPDB D_1000202131 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2014-09-10
2 'Structure model' 1 1 2014-10-22
3 'Structure model' 1 2 2017-09-06
4 'Structure model' 1 3 2020-01-01
5 'Structure model' 1 4 2023-12-27
6 'Structure model' 1 5 2024-11-06
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Database references'
2 3 'Structure model' 'Author supporting evidence'
3 3 'Structure model' 'Data collection'
4 3 'Structure model' 'Database references'
5 3 'Structure model' 'Derived calculations'
6 3 'Structure model' Other
7 3 'Structure model' 'Source and taxonomy'
8 4 'Structure model' 'Author supporting evidence'
9 5 'Structure model' 'Data collection'
10 5 'Structure model' 'Database references'
11 5 'Structure model' 'Derived calculations'
12 5 'Structure model' 'Refinement description'
13 6 'Structure model' 'Structure summary'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 3 'Structure model' citation
2 3 'Structure model' diffrn_source
3 3 'Structure model' pdbx_audit_support
4 3 'Structure model' pdbx_database_status
5 3 'Structure model' pdbx_entity_src_syn
6 3 'Structure model' pdbx_struct_oper_list
7 4 'Structure model' pdbx_audit_support
8 5 'Structure model' chem_comp_atom
9 5 'Structure model' chem_comp_bond
10 5 'Structure model' database_2
11 5 'Structure model' refine_hist
12 5 'Structure model' struct_conn
13 6 'Structure model' pdbx_entry_details
14 6 'Structure model' pdbx_modification_feature
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 3 'Structure model' '_citation.journal_id_CSD'
2 3 'Structure model' '_diffrn_source.pdbx_synchrotron_site'
3 3 'Structure model' '_pdbx_audit_support.funding_organization'
4 3 'Structure model' '_pdbx_database_status.pdb_format_compatible'
5 3 'Structure model' '_pdbx_entity_src_syn.pdbx_alt_source_flag'
6 3 'Structure model' '_pdbx_struct_oper_list.symmetry_operation'
7 4 'Structure model' '_pdbx_audit_support.funding_organization'
8 5 'Structure model' '_database_2.pdbx_DOI'
9 5 'Structure model' '_database_2.pdbx_database_accession'
10 5 'Structure model' '_refine_hist.number_atoms_total'
11 5 'Structure model' '_refine_hist.pdbx_number_atoms_nucleic_acid'
12 5 'Structure model' '_refine_hist.pdbx_number_atoms_protein'
13 5 'Structure model' '_struct_conn.pdbx_dist_value'
14 5 'Structure model' '_struct_conn.ptnr1_label_atom_id'
15 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id'
16 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id'
17 5 'Structure model' '_struct_conn.ptnr2_label_atom_id'
18 5 'Structure model' '_struct_conn.ptnr2_label_comp_id'
19 5 'Structure model' '_struct_conn.ptnr2_label_seq_id'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.entry_id 4TTK
_pdbx_database_status.recvd_initial_deposition_date 2014-06-22
_pdbx_database_status.SG_entry N
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_nmr_data ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Wang, C.K.' 1
'King, G.J.' 2
'Craik, D.J.' 3
#
_citation.abstract ?
_citation.abstract_id_CAS ?
_citation.book_id_ISBN ?
_citation.book_publisher ?
_citation.book_publisher_city ?
_citation.book_title ?
_citation.coordinate_linkage ?
_citation.country GE
_citation.database_id_Medline ?
_citation.details ?
_citation.id primary
_citation.journal_abbrev Angew.Chem.Int.Ed.Engl.
_citation.journal_id_ASTM ACIEAY
_citation.journal_id_CSD 0179
_citation.journal_id_ISSN 1521-3773
_citation.journal_full ?
_citation.journal_issue ?
_citation.journal_volume 53
_citation.language ?
_citation.page_first 11236
_citation.page_last 11241
_citation.title 'Racemic and Quasi-Racemic X-ray Structures of Cyclic Disulfide-Rich Peptide Drug Scaffolds.'
_citation.year 2014
_citation.database_id_CSD ?
_citation.pdbx_database_id_DOI 10.1002/anie.201406563
_citation.pdbx_database_id_PubMed 25168664
_citation.unpublished_flag ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Wang, C.K.' 1 ?
primary 'King, G.J.' 2 ?
primary 'Northfield, S.E.' 3 ?
primary 'Ojeda, P.G.' 4 ?
primary 'Craik, D.J.' 5 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn 'Sunflower Trypsin Inhibitor-1 (SFTI-1) (D-form)' 1534.822 1 ? ? ? ?
2 water nat water 18.015 7 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(D)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer yes
_entity_poly.pdbx_seq_one_letter_code 'G(DAR)(DCY)(DTH)(DLY)(DSN)(DIL)(DPR)(DPR)(DIL)(DCY)(DPN)(DPR)(DAS)'
_entity_poly.pdbx_seq_one_letter_code_can GRCTKSIPPICFPD
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
_pdbx_entity_nonpoly.entity_id 2
_pdbx_entity_nonpoly.name water
_pdbx_entity_nonpoly.comp_id HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 GLY n
1 2 DAR n
1 3 DCY n
1 4 DTH n
1 5 DLY n
1 6 DSN n
1 7 DIL n
1 8 DPR n
1 9 DPR n
1 10 DIL n
1 11 DCY n
1 12 DPN n
1 13 DPR n
1 14 DAS n
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num 1
_pdbx_entity_src_syn.pdbx_end_seq_num 14
_pdbx_entity_src_syn.organism_scientific 'Helianthus annuus'
_pdbx_entity_src_syn.organism_common_name 3
_pdbx_entity_src_syn.ncbi_taxonomy_id 4232
_pdbx_entity_src_syn.details 'chemical synthesis'
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
DAR 'D-peptide linking' . D-ARGININE ? 'C6 H15 N4 O2 1' 175.209
DAS 'D-peptide linking' . 'D-ASPARTIC ACID' ? 'C4 H7 N O4' 133.103
DCY 'D-peptide linking' . D-CYSTEINE ? 'C3 H7 N O2 S' 121.158
DIL 'D-peptide linking' . D-ISOLEUCINE ? 'C6 H13 N O2' 131.173
DLY 'D-peptide linking' . D-LYSINE ? 'C6 H14 N2 O2' 146.188
DPN 'D-peptide linking' . D-PHENYLALANINE ? 'C9 H11 N O2' 165.189
DPR 'D-peptide linking' . D-PROLINE ? 'C5 H9 N O2' 115.130
DSN 'D-peptide linking' . D-SERINE ? 'C3 H7 N O3' 105.093
DTH 'D-peptide linking' . D-THREONINE ? 'C4 H9 N O3' 119.119
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067
HOH non-polymer . WATER ? 'H2 O' 18.015
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 GLY 1 1 1 GLY GLY A . n
A 1 2 DAR 2 2 2 DAR DAR A . n
A 1 3 DCY 3 3 3 DCY DCY A . n
A 1 4 DTH 4 4 4 DTH DTH A . n
A 1 5 DLY 5 5 5 DLY DLY A . n
A 1 6 DSN 6 6 6 DSN DSN A . n
A 1 7 DIL 7 7 7 DIL DIL A . n
A 1 8 DPR 8 8 8 DPR DPR A . n
A 1 9 DPR 9 9 9 DPR DPR A . n
A 1 10 DIL 10 10 10 DIL DIL A . n
A 1 11 DCY 11 11 11 DCY DCY A . n
A 1 12 DPN 12 12 12 DPN DPN A . n
A 1 13 DPR 13 13 13 DPR DPR A . n
A 1 14 DAS 14 14 14 DAS DAS A . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HOH 1 101 7 HOH HOH A .
B 2 HOH 2 102 4 HOH HOH A .
B 2 HOH 3 103 5 HOH HOH A .
B 2 HOH 4 104 6 HOH HOH A .
B 2 HOH 5 105 3 HOH HOH A .
B 2 HOH 6 106 1 HOH HOH A .
B 2 HOH 7 107 2 HOH HOH A .
#
loop_
_software.citation_id
_software.classification
_software.compiler_name
_software.compiler_version
_software.contact_author
_software.contact_author_email
_software.date
_software.description
_software.dependencies
_software.hardware
_software.language
_software.location
_software.mods
_software.name
_software.os
_software.os_version
_software.type
_software.version
_software.pdbx_ordinal
? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(phenix.refine: 1.8.2_1309)' 1
? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? CrystalClear ? ? ? . 2
? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.14 3
#
_cell.entry_id 4TTK
_cell.length_a 42.640
_cell.length_b 42.640
_cell.length_c 12.965
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 120.00
_cell.Z_PDB 6
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 4TTK
_symmetry.space_group_name_H-M 'P -3'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 147
#
_exptl.absorpt_coefficient_mu ?
_exptl.absorpt_correction_T_max ?
_exptl.absorpt_correction_T_min ?
_exptl.absorpt_correction_type ?
_exptl.absorpt_process_details ?
_exptl.entry_id 4TTK
_exptl.crystals_number 1
_exptl.details ?
_exptl.method 'X-RAY DIFFRACTION'
_exptl.method_details ?
#
_exptl_crystal.colour ?
_exptl_crystal.density_diffrn ?
_exptl_crystal.density_Matthews 2.30
_exptl_crystal.density_method ?
_exptl_crystal.density_percent_sol 46.58
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.id 1
_exptl_crystal.preparation ?
_exptl_crystal.size_max ?
_exptl_crystal.size_mid ?
_exptl_crystal.size_min ?
_exptl_crystal.size_rad ?
_exptl_crystal.colour_lustre ?
_exptl_crystal.colour_modifier ?
_exptl_crystal.colour_primary ?
_exptl_crystal.density_meas ?
_exptl_crystal.density_meas_esd ?
_exptl_crystal.density_meas_gt ?
_exptl_crystal.density_meas_lt ?
_exptl_crystal.density_meas_temp ?
_exptl_crystal.density_meas_temp_esd ?
_exptl_crystal.density_meas_temp_gt ?
_exptl_crystal.density_meas_temp_lt ?
_exptl_crystal.pdbx_crystal_image_url ?
_exptl_crystal.pdbx_crystal_image_format ?
_exptl_crystal.pdbx_mosaicity ?
_exptl_crystal.pdbx_mosaicity_esd ?
#
_exptl_crystal_grow.apparatus ?
_exptl_crystal_grow.atmosphere ?
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.details ?
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.method_ref ?
_exptl_crystal_grow.pH 7.5
_exptl_crystal_grow.pressure ?
_exptl_crystal_grow.pressure_esd ?
_exptl_crystal_grow.seeding ?
_exptl_crystal_grow.seeding_ref ?
_exptl_crystal_grow.temp 293
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.temp_esd ?
_exptl_crystal_grow.time ?
_exptl_crystal_grow.pdbx_details
'0.1 M HEPES pH 7.5, 1.0 M ammonium sulfate, 3% w/v polyethylene glycol 8,000, 0.14 M sodium thiocyanate'
_exptl_crystal_grow.pdbx_pH_range ?
#
_diffrn.ambient_environment ?
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.ambient_temp_esd ?
_diffrn.crystal_id 1
_diffrn.crystal_support ?
_diffrn.crystal_treatment ?
_diffrn.details ?
_diffrn.id 1
_diffrn.ambient_pressure ?
_diffrn.ambient_pressure_esd ?
_diffrn.ambient_pressure_gt ?
_diffrn.ambient_pressure_lt ?
_diffrn.ambient_temp_gt ?
_diffrn.ambient_temp_lt ?
#
_diffrn_detector.details ?
_diffrn_detector.detector CCD
_diffrn_detector.diffrn_id 1
_diffrn_detector.type 'ADSC QUANTUM 315r'
_diffrn_detector.area_resol_mean ?
_diffrn_detector.dtime ?
_diffrn_detector.pdbx_frames_total ?
_diffrn_detector.pdbx_collection_time_total ?
_diffrn_detector.pdbx_collection_date 2013-11-12
#
_diffrn_radiation.collimation ?
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.filter_edge ?
_diffrn_radiation.inhomogeneity ?
_diffrn_radiation.monochromator ?
_diffrn_radiation.polarisn_norm ?
_diffrn_radiation.polarisn_ratio ?
_diffrn_radiation.probe ?
_diffrn_radiation.type ?
_diffrn_radiation.xray_symbol ?
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.pdbx_wavelength_list ?
_diffrn_radiation.pdbx_wavelength ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_analyzer ?
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 0.9537
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.current ?
_diffrn_source.details ?
_diffrn_source.diffrn_id 1
_diffrn_source.power ?
_diffrn_source.size ?
_diffrn_source.source SYNCHROTRON
_diffrn_source.target ?
_diffrn_source.type 'AUSTRALIAN SYNCHROTRON BEAMLINE MX2'
_diffrn_source.voltage ?
_diffrn_source.take-off_angle ?
_diffrn_source.pdbx_wavelength_list 0.9537
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_synchrotron_beamline MX2
_diffrn_source.pdbx_synchrotron_site 'Australian Synchrotron'
#
_reflns.B_iso_Wilson_estimate 46.920
_reflns.entry_id 4TTK
_reflns.data_reduction_details ?
_reflns.data_reduction_method ?
_reflns.d_resolution_high 1.25
_reflns.d_resolution_low 21.46
_reflns.details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.number_all ?
_reflns.number_obs 7289
_reflns.observed_criterion ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.observed_criterion_I_max ?
_reflns.observed_criterion_I_min ?
_reflns.observed_criterion_sigma_F ?
_reflns.observed_criterion_sigma_I ?
_reflns.percent_possible_obs 99.4
_reflns.R_free_details ?
_reflns.Rmerge_F_all ?
_reflns.Rmerge_F_obs ?
_reflns.Friedel_coverage ?
_reflns.number_gt ?
_reflns.threshold_expression ?
_reflns.pdbx_redundancy 11.40
_reflns.pdbx_Rmerge_I_obs ?
_reflns.pdbx_Rmerge_I_all ?
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_av_sigmaI ?
_reflns.pdbx_netI_over_sigmaI 45.3
_reflns.pdbx_res_netI_over_av_sigmaI_2 ?
_reflns.pdbx_res_netI_over_sigmaI_2 ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_d_res_high_opt ?
_reflns.pdbx_d_res_low_opt ?
_reflns.pdbx_d_res_opt_method ?
_reflns.phase_calculation_details ?
_reflns.pdbx_Rrim_I_all ?
_reflns.pdbx_Rpim_I_all ?
_reflns.pdbx_d_opt ?
_reflns.pdbx_number_measured_all ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
_reflns.pdbx_CC_half ?
_reflns.pdbx_R_split ?
#
_reflns_shell.d_res_high 1.25
_reflns_shell.d_res_low 1.29
_reflns_shell.meanI_over_sigI_all ?
_reflns_shell.meanI_over_sigI_obs 7.3
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_possible ?
_reflns_shell.number_unique_all ?
_reflns_shell.number_unique_obs ?
_reflns_shell.percent_possible_all 98.9
_reflns_shell.percent_possible_obs ?
_reflns_shell.Rmerge_F_all ?
_reflns_shell.Rmerge_F_obs ?
_reflns_shell.Rmerge_I_all ?
_reflns_shell.Rmerge_I_obs 0.221
_reflns_shell.meanI_over_sigI_gt ?
_reflns_shell.meanI_over_uI_all ?
_reflns_shell.meanI_over_uI_gt ?
_reflns_shell.number_measured_gt ?
_reflns_shell.number_unique_gt ?
_reflns_shell.percent_possible_gt ?
_reflns_shell.Rmerge_F_gt ?
_reflns_shell.Rmerge_I_gt ?
_reflns_shell.pdbx_redundancy 4.9
_reflns_shell.pdbx_Rsym_value 0.221
_reflns_shell.pdbx_chi_squared ?
_reflns_shell.pdbx_netI_over_sigmaI_all ?
_reflns_shell.pdbx_netI_over_sigmaI_obs ?
_reflns_shell.pdbx_Rrim_I_all ?
_reflns_shell.pdbx_Rpim_I_all ?
_reflns_shell.pdbx_rejects ?
_reflns_shell.pdbx_ordinal 1
_reflns_shell.pdbx_diffrn_id 1
_reflns_shell.pdbx_CC_half ?
_reflns_shell.pdbx_R_split ?
#
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.entry_id 4TTK
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.ls_number_reflns_obs 7286
_refine.ls_number_reflns_all ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 1.35
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 13.957
_refine.ls_d_res_high 1.2502
_refine.ls_percent_reflns_obs 99.74
_refine.ls_R_factor_obs 0.2637
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work 0.2623
_refine.ls_R_factor_R_free 0.2763
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free 10.35
_refine.ls_number_reflns_R_free 754
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.B_iso_mean ?
_refine.aniso_B[1][1] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[3][3] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][3] ?
_refine.solvent_model_details 'FLAT BULK SOLVENT MODEL'
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_solvent_vdw_probe_radii 1.11
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii 0.90
_refine.pdbx_ls_cross_valid_method 'FREE R-VALUE'
_refine.details ?
_refine.pdbx_starting_model ?
_refine.pdbx_method_to_determine_struct ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values ML
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.overall_SU_ML 0.08
_refine.pdbx_overall_phase_error 18.78
_refine.overall_SU_B ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.cycle_id final
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.d_res_high 1.2502
_refine_hist.d_res_low 13.957
_refine_hist.pdbx_number_atoms_ligand 104
_refine_hist.number_atoms_solvent 7
_refine_hist.number_atoms_total 216
_refine_hist.pdbx_number_residues_total 1
_refine_hist.pdbx_B_iso_mean_ligand 8.87
_refine_hist.pdbx_B_iso_mean_solvent 14.19
_refine_hist.pdbx_number_atoms_protein 105
_refine_hist.pdbx_number_atoms_nucleic_acid 0
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
f_bond_d 0.006 ? ? 110 'X-RAY DIFFRACTION' ?
f_angle_d 1.253 ? ? 146 'X-RAY DIFFRACTION' ?
f_dihedral_angle_d 7.834 ? ? 43 'X-RAY DIFFRACTION' ?
f_chiral_restr 0.053 ? ? 16 'X-RAY DIFFRACTION' ?
f_plane_restr 0.011 ? ? 19 'X-RAY DIFFRACTION' ?
#
loop_
_refine_ls_shell.pdbx_refine_id
_refine_ls_shell.pdbx_total_number_of_bins_used
_refine_ls_shell.d_res_high
_refine_ls_shell.d_res_low
_refine_ls_shell.number_reflns_R_work
_refine_ls_shell.R_factor_R_work
_refine_ls_shell.percent_reflns_obs
_refine_ls_shell.R_factor_R_free
_refine_ls_shell.R_factor_R_free_error
_refine_ls_shell.percent_reflns_R_free
_refine_ls_shell.number_reflns_R_free
_refine_ls_shell.number_reflns_all
_refine_ls_shell.R_factor_all
_refine_ls_shell.R_factor_obs
_refine_ls_shell.number_reflns_obs
'X-RAY DIFFRACTION' . 1.2502 1.3466 1308 0.2634 100.00 0.2673 . . 155 . . . .
'X-RAY DIFFRACTION' . 1.3466 1.4820 1307 0.2504 100.00 0.3075 . . 150 . . . .
'X-RAY DIFFRACTION' . 1.4820 1.6961 1289 0.2569 100.00 0.2711 . . 157 . . . .
'X-RAY DIFFRACTION' . 1.6961 2.1357 1335 0.2408 100.00 0.2636 . . 151 . . . .
'X-RAY DIFFRACTION' . 2.1357 13.9581 1293 0.2793 99.00 0.2796 . . 141 . . . .
#
_struct.entry_id 4TTK
_struct.title 'Racemic structure of Sunflower Trypsin Inhibitor-1 (SFTI-1)'
_struct.pdbx_model_details ?
_struct.pdbx_formula_weight ?
_struct.pdbx_formula_weight_method ?
_struct.pdbx_model_type_details ?
_struct.pdbx_CASP_flag ?
#
_struct_keywords.entry_id 4TTK
_struct_keywords.text 'cyclic peptide, disulfide bond, Hydrolase Inhibitor'
_struct_keywords.pdbx_keywords 'Hydrolase Inhibitor'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
#
_struct_ref.db_code 4TTK
_struct_ref.db_name PDB
_struct_ref.details ?
_struct_ref.entity_id 1
_struct_ref.id 1
_struct_ref.seq_align ?
_struct_ref.seq_dif ?
_struct_ref.pdbx_db_accession 4TTK
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_align_begin 1
_struct_ref.pdbx_align_end ?
_struct_ref.pdbx_db_isoform ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 4TTK
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 14
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession 4TTK
_struct_ref_seq.db_align_beg 1
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 14
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 14
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_and_software_defined_assembly
_pdbx_struct_assembly.method_details PISA
_pdbx_struct_assembly.oligomeric_details monomeric
_pdbx_struct_assembly.oligomeric_count 1
#
loop_
_pdbx_struct_assembly_prop.biol_id
_pdbx_struct_assembly_prop.type
_pdbx_struct_assembly_prop.value
_pdbx_struct_assembly_prop.details
1 'ABSA (A^2)' 140 ?
1 MORE -3 ?
1 'SSA (A^2)' 1480 ?
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
_struct_biol.details
'Crystal obtained from racemic mixture of D- and L- enantiomers of SFTI-1. The D-form is represented in the asymmetric unit.'
_struct_biol.id 1
_struct_biol.pdbx_parent_biol_id ?
_struct_biol.pdbx_formula_weight ?
_struct_biol.pdbx_formula_weight_method ?
_struct_biol.pdbx_aggregation_state ?
_struct_biol.pdbx_assembly_method ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
disulf1 disulf ? ? A DCY 3 SG ? ? ? 1_555 A DCY 11 SG ? ? A DCY 3 A DCY 11 1_555 ? ? ? ? ? ? ? 2.048 ? ?
covale1 covale both ? A GLY 1 C ? ? ? 1_555 A DAR 2 N ? ? A GLY 1 A DAR 2 1_555 ? ? ? ? ? ? ? 1.330 ? ?
covale2 covale both ? A GLY 1 N ? ? ? 1_555 A DAS 14 C ? ? A GLY 1 A DAS 14 1_555 ? ? ? ? ? ? ? 1.329 ? ?
covale3 covale both ? A DAR 2 C ? ? ? 1_555 A DCY 3 N ? ? A DAR 2 A DCY 3 1_555 ? ? ? ? ? ? ? 1.327 ? ?
covale4 covale both ? A DCY 3 C ? ? ? 1_555 A DTH 4 N ? ? A DCY 3 A DTH 4 1_555 ? ? ? ? ? ? ? 1.329 ? ?
covale5 covale both ? A DTH 4 C ? ? ? 1_555 A DLY 5 N ? ? A DTH 4 A DLY 5 1_555 ? ? ? ? ? ? ? 1.326 ? ?
covale6 covale both ? A DLY 5 C ? ? ? 1_555 A DSN 6 N ? ? A DLY 5 A DSN 6 1_555 ? ? ? ? ? ? ? 1.321 ? ?
covale7 covale both ? A DSN 6 C ? ? ? 1_555 A DIL 7 N ? ? A DSN 6 A DIL 7 1_555 ? ? ? ? ? ? ? 1.327 ? ?
covale8 covale both ? A DIL 7 C ? ? ? 1_555 A DPR 8 N ? ? A DIL 7 A DPR 8 1_555 ? ? ? ? ? ? ? 1.345 ? ?
covale9 covale both ? A DPR 8 C ? ? ? 1_555 A DPR 9 N ? ? A DPR 8 A DPR 9 1_555 ? ? ? ? ? ? ? 1.340 ? ?
covale10 covale both ? A DPR 9 C ? ? ? 1_555 A DIL 10 N ? ? A DPR 9 A DIL 10 1_555 ? ? ? ? ? ? ? 1.328 ? ?
covale11 covale both ? A DIL 10 C ? ? ? 1_555 A DCY 11 N ? ? A DIL 10 A DCY 11 1_555 ? ? ? ? ? ? ? 1.329 ? ?
covale12 covale both ? A DCY 11 C ? ? ? 1_555 A DPN 12 N ? ? A DCY 11 A DPN 12 1_555 ? ? ? ? ? ? ? 1.325 ? ?
covale13 covale both ? A DPN 12 C ? ? ? 1_555 A DPR 13 N ? ? A DPN 12 A DPR 13 1_555 ? ? ? ? ? ? ? 1.352 ? ?
covale14 covale both ? A DPR 13 C ? ? ? 1_555 A DAS 14 N ? ? A DPR 13 A DAS 14 1_555 ? ? ? ? ? ? ? 1.326 ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
disulf ? ?
covale ? ?
#
loop_
_pdbx_modification_feature.ordinal
_pdbx_modification_feature.label_comp_id
_pdbx_modification_feature.label_asym_id
_pdbx_modification_feature.label_seq_id
_pdbx_modification_feature.label_alt_id
_pdbx_modification_feature.modified_residue_label_comp_id
_pdbx_modification_feature.modified_residue_label_asym_id
_pdbx_modification_feature.modified_residue_label_seq_id
_pdbx_modification_feature.modified_residue_label_alt_id
_pdbx_modification_feature.auth_comp_id
_pdbx_modification_feature.auth_asym_id
_pdbx_modification_feature.auth_seq_id
_pdbx_modification_feature.PDB_ins_code
_pdbx_modification_feature.symmetry
_pdbx_modification_feature.modified_residue_auth_comp_id
_pdbx_modification_feature.modified_residue_auth_asym_id
_pdbx_modification_feature.modified_residue_auth_seq_id
_pdbx_modification_feature.modified_residue_PDB_ins_code
_pdbx_modification_feature.modified_residue_symmetry
_pdbx_modification_feature.comp_id_linking_atom
_pdbx_modification_feature.modified_residue_id_linking_atom
_pdbx_modification_feature.modified_residue_id
_pdbx_modification_feature.ref_pcm_id
_pdbx_modification_feature.ref_comp_id
_pdbx_modification_feature.type
_pdbx_modification_feature.category
1 DCY A 3 ? DCY A 11 ? DCY A 3 ? 1_555 DCY A 11 ? 1_555 SG SG . . . None 'Disulfide bridge'
2 GLY A 1 ? DAS A 14 ? GLY A 1 ? 1_555 DAS A 14 ? 1_555 N C . . . None 'Non-standard linkage'
#
_struct_mon_prot_cis.pdbx_id 1
_struct_mon_prot_cis.label_comp_id DIL
_struct_mon_prot_cis.label_seq_id 7
_struct_mon_prot_cis.label_asym_id A
_struct_mon_prot_cis.label_alt_id .
_struct_mon_prot_cis.pdbx_PDB_ins_code ?
_struct_mon_prot_cis.auth_comp_id DIL
_struct_mon_prot_cis.auth_seq_id 7
_struct_mon_prot_cis.auth_asym_id A
_struct_mon_prot_cis.pdbx_label_comp_id_2 DPR
_struct_mon_prot_cis.pdbx_label_seq_id_2 8
_struct_mon_prot_cis.pdbx_label_asym_id_2 A
_struct_mon_prot_cis.pdbx_PDB_ins_code_2 ?
_struct_mon_prot_cis.pdbx_auth_comp_id_2 DPR
_struct_mon_prot_cis.pdbx_auth_seq_id_2 8
_struct_mon_prot_cis.pdbx_auth_asym_id_2 A
_struct_mon_prot_cis.pdbx_PDB_model_num 1
_struct_mon_prot_cis.pdbx_omega_angle 9.98
#
_pdbx_entry_details.entry_id 4TTK
_pdbx_entry_details.compound_details ?
_pdbx_entry_details.source_details ?
_pdbx_entry_details.nonpolymer_details ?
_pdbx_entry_details.sequence_details ?
_pdbx_entry_details.has_ligand_of_interest ?
_pdbx_entry_details.has_protein_modification Y
#
_pdbx_validate_torsion.id 1
_pdbx_validate_torsion.PDB_model_num 1
_pdbx_validate_torsion.auth_comp_id DLY
_pdbx_validate_torsion.auth_asym_id A
_pdbx_validate_torsion.auth_seq_id 5
_pdbx_validate_torsion.PDB_ins_code ?
_pdbx_validate_torsion.label_alt_id ?
_pdbx_validate_torsion.phi 90.59
_pdbx_validate_torsion.psi -50.28
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
DAR N N N N 1
DAR CA C N R 2
DAR CB C N N 3
DAR CG C N N 4
DAR CD C N N 5
DAR NE N N N 6
DAR CZ C N N 7
DAR NH1 N N N 8
DAR NH2 N N N 9
DAR C C N N 10
DAR O O N N 11
DAR OXT O N N 12
DAR H H N N 13
DAR H2 H N N 14
DAR HA H N N 15
DAR HB2 H N N 16
DAR HB3 H N N 17
DAR HG2 H N N 18
DAR HG3 H N N 19
DAR HD2 H N N 20
DAR HD3 H N N 21
DAR HE H N N 22
DAR HH11 H N N 23
DAR HH12 H N N 24
DAR HH21 H N N 25
DAR HH22 H N N 26
DAR HXT H N N 27
DAS N N N N 28
DAS CA C N R 29
DAS C C N N 30
DAS O O N N 31
DAS CB C N N 32
DAS CG C N N 33
DAS OD1 O N N 34
DAS OD2 O N N 35
DAS OXT O N N 36
DAS H H N N 37
DAS H2 H N N 38
DAS HA H N N 39
DAS HB2 H N N 40
DAS HB3 H N N 41
DAS HD2 H N N 42
DAS HXT H N N 43
DCY N N N N 44
DCY CA C N S 45
DCY C C N N 46
DCY O O N N 47
DCY CB C N N 48
DCY SG S N N 49
DCY OXT O N N 50
DCY H H N N 51
DCY H2 H N N 52
DCY HA H N N 53
DCY HB2 H N N 54
DCY HB3 H N N 55
DCY HG H N N 56
DCY HXT H N N 57
DIL N N N N 58
DIL CA C N R 59
DIL C C N N 60
DIL O O N N 61
DIL CB C N R 62
DIL CG1 C N N 63
DIL CG2 C N N 64
DIL CD1 C N N 65
DIL OXT O N N 66
DIL H H N N 67
DIL H2 H N N 68
DIL HA H N N 69
DIL HB H N N 70
DIL HG12 H N N 71
DIL HG13 H N N 72
DIL HG21 H N N 73
DIL HG22 H N N 74
DIL HG23 H N N 75
DIL HD11 H N N 76
DIL HD12 H N N 77
DIL HD13 H N N 78
DIL HXT H N N 79
DLY N N N N 80
DLY CA C N R 81
DLY C C N N 82
DLY O O N N 83
DLY CB C N N 84
DLY CG C N N 85
DLY CD C N N 86
DLY CE C N N 87
DLY NZ N N N 88
DLY OXT O N N 89
DLY H H N N 90
DLY H2 H N N 91
DLY HA H N N 92
DLY HB2 H N N 93
DLY HB3 H N N 94
DLY HG2 H N N 95
DLY HG3 H N N 96
DLY HD2 H N N 97
DLY HD3 H N N 98
DLY HE2 H N N 99
DLY HE3 H N N 100
DLY HZ1 H N N 101
DLY HZ2 H N N 102
DLY HXT H N N 103
DPN N N N N 104
DPN CA C N R 105
DPN C C N N 106
DPN O O N N 107
DPN OXT O N N 108
DPN CB C N N 109
DPN CG C Y N 110
DPN CD1 C Y N 111
DPN CD2 C Y N 112
DPN CE1 C Y N 113
DPN CE2 C Y N 114
DPN CZ C Y N 115
DPN H H N N 116
DPN H2 H N N 117
DPN HA H N N 118
DPN HXT H N N 119
DPN HB2 H N N 120
DPN HB3 H N N 121
DPN HD1 H N N 122
DPN HD2 H N N 123
DPN HE1 H N N 124
DPN HE2 H N N 125
DPN HZ H N N 126
DPR N N N N 127
DPR CA C N R 128
DPR CB C N N 129
DPR CG C N N 130
DPR CD C N N 131
DPR C C N N 132
DPR O O N N 133
DPR OXT O N N 134
DPR H H N N 135
DPR HA H N N 136
DPR HB2 H N N 137
DPR HB3 H N N 138
DPR HG2 H N N 139
DPR HG3 H N N 140
DPR HD2 H N N 141
DPR HD3 H N N 142
DPR HXT H N N 143
DSN N N N N 144
DSN CA C N R 145
DSN C C N N 146
DSN O O N N 147
DSN OXT O N N 148
DSN CB C N N 149
DSN OG O N N 150
DSN H H N N 151
DSN H2 H N N 152
DSN HA H N N 153
DSN HXT H N N 154
DSN HB2 H N N 155
DSN HB3 H N N 156
DSN HG H N N 157
DTH N N N N 158
DTH CA C N R 159
DTH CB C N S 160
DTH CG2 C N N 161
DTH OG1 O N N 162
DTH C C N N 163
DTH O O N N 164
DTH OXT O N N 165
DTH H H N N 166
DTH H2 H N N 167
DTH HA H N N 168
DTH HB H N N 169
DTH HG21 H N N 170
DTH HG22 H N N 171
DTH HG23 H N N 172
DTH HG1 H N N 173
DTH HXT H N N 174
GLY N N N N 175
GLY CA C N N 176
GLY C C N N 177
GLY O O N N 178
GLY OXT O N N 179
GLY H H N N 180
GLY H2 H N N 181
GLY HA2 H N N 182
GLY HA3 H N N 183
GLY HXT H N N 184
HOH O O N N 185
HOH H1 H N N 186
HOH H2 H N N 187
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DAR N CA sing N N 1
DAR N H sing N N 2
DAR N H2 sing N N 3
DAR CA CB sing N N 4
DAR CA C sing N N 5
DAR CA HA sing N N 6
DAR CB CG sing N N 7
DAR CB HB2 sing N N 8
DAR CB HB3 sing N N 9
DAR CG CD sing N N 10
DAR CG HG2 sing N N 11
DAR CG HG3 sing N N 12
DAR CD NE sing N N 13
DAR CD HD2 sing N N 14
DAR CD HD3 sing N N 15
DAR NE CZ sing N N 16
DAR NE HE sing N N 17
DAR CZ NH1 sing N N 18
DAR CZ NH2 doub N N 19
DAR NH1 HH11 sing N N 20
DAR NH1 HH12 sing N N 21
DAR NH2 HH21 sing N N 22
DAR NH2 HH22 sing N N 23
DAR C O doub N N 24
DAR C OXT sing N N 25
DAR OXT HXT sing N N 26
DAS N CA sing N N 27
DAS N H sing N N 28
DAS N H2 sing N N 29
DAS CA C sing N N 30
DAS CA CB sing N N 31
DAS CA HA sing N N 32
DAS C O doub N N 33
DAS C OXT sing N N 34
DAS CB CG sing N N 35
DAS CB HB2 sing N N 36
DAS CB HB3 sing N N 37
DAS CG OD1 doub N N 38
DAS CG OD2 sing N N 39
DAS OD2 HD2 sing N N 40
DAS OXT HXT sing N N 41
DCY N CA sing N N 42
DCY N H sing N N 43
DCY N H2 sing N N 44
DCY CA C sing N N 45
DCY CA CB sing N N 46
DCY CA HA sing N N 47
DCY C O doub N N 48
DCY C OXT sing N N 49
DCY CB SG sing N N 50
DCY CB HB2 sing N N 51
DCY CB HB3 sing N N 52
DCY SG HG sing N N 53
DCY OXT HXT sing N N 54
DIL N CA sing N N 55
DIL N H sing N N 56
DIL N H2 sing N N 57
DIL CA C sing N N 58
DIL CA CB sing N N 59
DIL CA HA sing N N 60
DIL C O doub N N 61
DIL C OXT sing N N 62
DIL CB CG1 sing N N 63
DIL CB CG2 sing N N 64
DIL CB HB sing N N 65
DIL CG1 CD1 sing N N 66
DIL CG1 HG12 sing N N 67
DIL CG1 HG13 sing N N 68
DIL CG2 HG21 sing N N 69
DIL CG2 HG22 sing N N 70
DIL CG2 HG23 sing N N 71
DIL CD1 HD11 sing N N 72
DIL CD1 HD12 sing N N 73
DIL CD1 HD13 sing N N 74
DIL OXT HXT sing N N 75
DLY N CA sing N N 76
DLY N H sing N N 77
DLY N H2 sing N N 78
DLY CA C sing N N 79
DLY CA CB sing N N 80
DLY CA HA sing N N 81
DLY C O doub N N 82
DLY C OXT sing N N 83
DLY CB CG sing N N 84
DLY CB HB2 sing N N 85
DLY CB HB3 sing N N 86
DLY CG CD sing N N 87
DLY CG HG2 sing N N 88
DLY CG HG3 sing N N 89
DLY CD CE sing N N 90
DLY CD HD2 sing N N 91
DLY CD HD3 sing N N 92
DLY CE NZ sing N N 93
DLY CE HE2 sing N N 94
DLY CE HE3 sing N N 95
DLY NZ HZ1 sing N N 96
DLY NZ HZ2 sing N N 97
DLY OXT HXT sing N N 98
DPN N CA sing N N 99
DPN N H sing N N 100
DPN N H2 sing N N 101
DPN CA C sing N N 102
DPN CA CB sing N N 103
DPN CA HA sing N N 104
DPN C O doub N N 105
DPN C OXT sing N N 106
DPN OXT HXT sing N N 107
DPN CB CG sing N N 108
DPN CB HB2 sing N N 109
DPN CB HB3 sing N N 110
DPN CG CD1 doub Y N 111
DPN CG CD2 sing Y N 112
DPN CD1 CE1 sing Y N 113
DPN CD1 HD1 sing N N 114
DPN CD2 CE2 doub Y N 115
DPN CD2 HD2 sing N N 116
DPN CE1 CZ doub Y N 117
DPN CE1 HE1 sing N N 118
DPN CE2 CZ sing Y N 119
DPN CE2 HE2 sing N N 120
DPN CZ HZ sing N N 121
DPR N CA sing N N 122
DPR N CD sing N N 123
DPR N H sing N N 124
DPR CA CB sing N N 125
DPR CA C sing N N 126
DPR CA HA sing N N 127
DPR CB CG sing N N 128
DPR CB HB2 sing N N 129
DPR CB HB3 sing N N 130
DPR CG CD sing N N 131
DPR CG HG2 sing N N 132
DPR CG HG3 sing N N 133
DPR CD HD2 sing N N 134
DPR CD HD3 sing N N 135
DPR C O doub N N 136
DPR C OXT sing N N 137
DPR OXT HXT sing N N 138
DSN N CA sing N N 139
DSN N H sing N N 140
DSN N H2 sing N N 141
DSN CA C sing N N 142
DSN CA CB sing N N 143
DSN CA HA sing N N 144
DSN C O doub N N 145
DSN C OXT sing N N 146
DSN OXT HXT sing N N 147
DSN CB OG sing N N 148
DSN CB HB2 sing N N 149
DSN CB HB3 sing N N 150
DSN OG HG sing N N 151
DTH N CA sing N N 152
DTH N H sing N N 153
DTH N H2 sing N N 154
DTH CA CB sing N N 155
DTH CA C sing N N 156
DTH CA HA sing N N 157
DTH CB CG2 sing N N 158
DTH CB OG1 sing N N 159
DTH CB HB sing N N 160
DTH CG2 HG21 sing N N 161
DTH CG2 HG22 sing N N 162
DTH CG2 HG23 sing N N 163
DTH OG1 HG1 sing N N 164
DTH C O doub N N 165
DTH C OXT sing N N 166
DTH OXT HXT sing N N 167
GLY N CA sing N N 168
GLY N H sing N N 169
GLY N H2 sing N N 170
GLY CA C sing N N 171
GLY CA HA2 sing N N 172
GLY CA HA3 sing N N 173
GLY C O doub N N 174
GLY C OXT sing N N 175
GLY OXT HXT sing N N 176
HOH O H1 sing N N 177
HOH O H2 sing N N 178
#
loop_
_pdbx_audit_support.funding_organization
_pdbx_audit_support.country
_pdbx_audit_support.grant_number
_pdbx_audit_support.ordinal
'Australian Research Council (ARC)' Australia LP110200213 1
'National Health and Medical Research Council (NHMRC, Australia)' Australia 546578 2
'National Health and Medical Research Council (NHMRC, Australia)' Australia APP1026501 3
#
_atom_sites.entry_id 4TTK
_atom_sites.fract_transf_matrix[1][1] 0.023452
_atom_sites.fract_transf_matrix[1][2] 0.013540
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.027080
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.077131
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
N
O
S
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 N N . GLY A 1 1 ? 8.087 -13.771 6.861 1.00 7.94 ? 1 GLY A N 1
ATOM 2 C CA . GLY A 1 1 ? 8.036 -15.019 6.127 1.00 7.78 ? 1 GLY A CA 1
ATOM 3 C C . GLY A 1 1 ? 9.189 -15.969 6.388 1.00 6.20 ? 1 GLY A C 1
ATOM 4 O O . GLY A 1 1 ? 9.389 -16.897 5.611 1.00 6.73 ? 1 GLY A O 1
HETATM 5 N N . DAR A 1 2 ? 9.943 -15.769 7.465 1.00 6.85 ? 2 DAR A N 1
HETATM 6 C CA . DAR A 1 2 ? 11.082 -16.647 7.704 1.00 6.66 ? 2 DAR A CA 1
HETATM 7 C CB . DAR A 1 2 ? 11.665 -16.451 9.104 1.00 6.82 ? 2 DAR A CB 1
HETATM 8 C CG . DAR A 1 2 ? 12.756 -17.472 9.432 1.00 7.58 ? 2 DAR A CG 1
HETATM 9 C CD . DAR A 1 2 ? 13.259 -17.369 10.864 1.00 8.89 ? 2 DAR A CD 1
HETATM 10 N NE . DAR A 1 2 ? 13.875 -16.074 11.142 1.00 7.81 ? 2 DAR A NE 1
HETATM 11 C CZ . DAR A 1 2 ? 15.121 -15.742 10.815 1.00 8.12 ? 2 DAR A CZ 1
HETATM 12 N NH1 . DAR A 1 2 ? 15.572 -14.536 11.114 1.00 9.20 ? 2 DAR A NH1 1
HETATM 13 N NH2 . DAR A 1 2 ? 15.926 -16.604 10.196 1.00 9.62 ? 2 DAR A NH2 1
HETATM 14 C C . DAR A 1 2 ? 12.158 -16.406 6.648 1.00 5.99 ? 2 DAR A C 1
HETATM 15 O O . DAR A 1 2 ? 12.399 -15.267 6.242 1.00 6.72 ? 2 DAR A O 1
HETATM 16 N N . DCY A 1 3 ? 12.788 -17.484 6.199 1.00 5.82 ? 3 DCY A N 1
HETATM 17 C CA . DCY A 1 3 ? 13.917 -17.394 5.282 1.00 5.65 ? 3 DCY A CA 1
HETATM 18 C C . DCY A 1 3 ? 15.136 -18.037 5.906 1.00 6.50 ? 3 DCY A C 1
HETATM 19 O O . DCY A 1 3 ? 15.020 -19.020 6.623 1.00 7.09 ? 3 DCY A O 1
HETATM 20 C CB . DCY A 1 3 ? 13.606 -18.107 3.965 1.00 7.62 ? 3 DCY A CB 1
HETATM 21 S SG . DCY A 1 3 ? 12.116 -17.551 3.110 1.00 7.67 ? 3 DCY A SG 1
HETATM 22 N N . DTH A 1 4 ? 16.310 -17.489 5.611 1.00 6.44 ? 4 DTH A N 1
HETATM 23 C CA . DTH A 1 4 ? 17.557 -18.117 6.022 1.00 6.61 ? 4 DTH A CA 1
HETATM 24 C CB . DTH A 1 4 ? 18.755 -17.171 5.834 1.00 6.95 ? 4 DTH A CB 1
HETATM 25 C CG2 . DTH A 1 4 ? 18.640 -15.964 6.743 1.00 7.73 ? 4 DTH A CG2 1
HETATM 26 O OG1 . DTH A 1 4 ? 18.808 -16.733 4.470 1.00 7.01 ? 4 DTH A OG1 1
HETATM 27 C C . DTH A 1 4 ? 17.807 -19.382 5.212 1.00 6.22 ? 4 DTH A C 1
HETATM 28 O O . DTH A 1 4 ? 17.442 -19.469 4.030 1.00 7.49 ? 4 DTH A O 1
HETATM 29 N N . DLY A 1 5 ? 18.444 -20.356 5.847 1.00 6.34 ? 5 DLY A N 1
HETATM 30 C CA . DLY A 1 5 ? 18.842 -21.590 5.180 1.00 7.56 ? 5 DLY A CA 1
HETATM 31 C C . DLY A 1 5 ? 20.243 -21.436 4.609 1.00 8.42 ? 5 DLY A C 1
HETATM 32 O O . DLY A 1 5 ? 21.115 -22.272 4.819 1.00 16.11 ? 5 DLY A O 1
HETATM 33 C CB . DLY A 1 5 ? 18.776 -22.758 6.164 1.00 9.28 ? 5 DLY A CB 1
HETATM 34 C CG . DLY A 1 5 ? 17.385 -22.982 6.737 1.00 9.99 ? 5 DLY A CG 1
HETATM 35 C CD . DLY A 1 5 ? 17.382 -24.086 7.780 1.00 12.74 ? 5 DLY A CD 1
HETATM 36 C CE . DLY A 1 5 ? 15.992 -24.259 8.365 1.00 13.38 ? 5 DLY A CE 1
HETATM 37 N NZ . DLY A 1 5 ? 15.946 -25.333 9.402 1.00 18.74 ? 5 DLY A NZ 1
HETATM 38 N N . DSN A 1 6 ? 20.440 -20.354 3.877 1.00 8.88 ? 6 DSN A N 1
HETATM 39 C CA . DSN A 1 6 ? 21.734 -20.003 3.319 1.00 7.19 ? 6 DSN A CA 1
HETATM 40 C C . DSN A 1 6 ? 21.720 -20.160 1.814 1.00 7.29 ? 6 DSN A C 1
HETATM 41 O O . DSN A 1 6 ? 20.669 -20.382 1.194 1.00 7.74 ? 6 DSN A O 1
HETATM 42 C CB . DSN A 1 6 ? 22.060 -18.557 3.676 1.00 7.08 ? 6 DSN A CB 1
HETATM 43 O OG . DSN A 1 6 ? 20.992 -17.694 3.306 1.00 7.56 ? 6 DSN A OG 1
HETATM 44 N N . DIL A 1 7 ? 22.902 -20.028 1.226 1.00 7.18 ? 7 DIL A N 1
HETATM 45 C CA . DIL A 1 7 ? 23.045 -19.980 -0.218 1.00 7.35 ? 7 DIL A CA 1
HETATM 46 C C . DIL A 1 7 ? 23.492 -18.583 -0.607 1.00 7.57 ? 7 DIL A C 1
HETATM 47 O O . DIL A 1 7 ? 24.609 -18.176 -0.287 1.00 7.88 ? 7 DIL A O 1
HETATM 48 C CB . DIL A 1 7 ? 24.069 -21.013 -0.716 1.00 8.21 ? 7 DIL A CB 1
HETATM 49 C CG1 . DIL A 1 7 ? 23.562 -22.430 -0.438 1.00 11.35 ? 7 DIL A CG1 1
HETATM 50 C CG2 . DIL A 1 7 ? 24.328 -20.833 -2.203 1.00 10.07 ? 7 DIL A CG2 1
HETATM 51 C CD1 . DIL A 1 7 ? 24.514 -23.519 -0.892 1.00 15.15 ? 7 DIL A CD1 1
HETATM 52 N N . DPR A 1 8 ? 22.604 -17.803 -1.248 1.00 7.39 ? 8 DPR A N 1
HETATM 53 C CA . DPR A 1 8 ? 21.178 -18.052 -1.452 1.00 7.82 ? 8 DPR A CA 1
HETATM 54 C CB . DPR A 1 8 ? 20.829 -17.044 -2.547 1.00 10.17 ? 8 DPR A CB 1
HETATM 55 C CG . DPR A 1 8 ? 21.664 -15.876 -2.213 1.00 9.27 ? 8 DPR A CG 1
HETATM 56 C CD . DPR A 1 8 ? 22.981 -16.458 -1.721 1.00 7.91 ? 8 DPR A CD 1
HETATM 57 C C . DPR A 1 8 ? 20.421 -17.676 -0.178 1.00 6.89 ? 8 DPR A C 1
HETATM 58 O O . DPR A 1 8 ? 20.997 -17.047 0.714 1.00 6.80 ? 8 DPR A O 1
HETATM 59 N N . DPR A 1 9 ? 19.138 -18.054 -0.089 1.00 7.08 ? 9 DPR A N 1
HETATM 60 C CA . DPR A 1 9 ? 18.301 -17.570 1.010 1.00 7.49 ? 9 DPR A CA 1
HETATM 61 C CB . DPR A 1 9 ? 16.992 -18.360 0.829 1.00 8.97 ? 9 DPR A CB 1
HETATM 62 C CG . DPR A 1 9 ? 17.360 -19.547 -0.008 1.00 10.39 ? 9 DPR A CG 1
HETATM 63 C CD . DPR A 1 9 ? 18.432 -19.042 -0.927 1.00 8.60 ? 9 DPR A CD 1
HETATM 64 C C . DPR A 1 9 ? 18.008 -16.087 0.883 1.00 6.60 ? 9 DPR A C 1
HETATM 65 O O . DPR A 1 9 ? 18.068 -15.518 -0.213 1.00 7.73 ? 9 DPR A O 1
HETATM 66 N N . DIL A 1 10 ? 17.671 -15.472 2.011 1.00 6.18 ? 10 DIL A N 1
HETATM 67 C CA . DIL A 1 10 ? 16.938 -14.213 2.023 1.00 6.72 ? 10 DIL A CA 1
HETATM 68 C C . DIL A 1 10 ? 15.706 -14.428 2.898 1.00 6.35 ? 10 DIL A C 1
HETATM 69 O O . DIL A 1 10 ? 15.747 -15.215 3.839 1.00 6.61 ? 10 DIL A O 1
HETATM 70 C CB . DIL A 1 10 ? 17.790 -13.011 2.514 1.00 7.14 ? 10 DIL A CB 1
HETATM 71 C CG1 . DIL A 1 10 ? 18.231 -13.185 3.974 1.00 8.40 ? 10 DIL A CG1 1
HETATM 72 C CG2 . DIL A 1 10 ? 18.998 -12.801 1.599 1.00 9.29 ? 10 DIL A CG2 1
HETATM 73 C CD1 . DIL A 1 10 ? 19.023 -11.988 4.509 1.00 8.72 ? 10 DIL A CD1 1
HETATM 74 N N . DCY A 1 11 ? 14.619 -13.730 2.586 1.00 6.11 ? 11 DCY A N 1
HETATM 75 C CA . DCY A 1 11 ? 13.373 -13.929 3.320 1.00 5.87 ? 11 DCY A CA 1
HETATM 76 C C . DCY A 1 11 ? 12.897 -12.619 3.924 1.00 6.30 ? 11 DCY A C 1
HETATM 77 O O . DCY A 1 11 ? 12.880 -11.581 3.272 1.00 6.84 ? 11 DCY A O 1
HETATM 78 C CB . DCY A 1 11 ? 12.298 -14.541 2.416 1.00 6.75 ? 11 DCY A CB 1
HETATM 79 S SG . DCY A 1 11 ? 12.736 -16.168 1.732 1.00 7.74 ? 11 DCY A SG 1
HETATM 80 N N . DPN A 1 12 ? 12.512 -12.695 5.190 1.00 6.38 ? 12 DPN A N 1
HETATM 81 C CA . DPN A 1 12 ? 12.195 -11.526 6.002 1.00 7.01 ? 12 DPN A CA 1
HETATM 82 C C . DPN A 1 12 ? 10.702 -11.220 5.972 1.00 8.01 ? 12 DPN A C 1
HETATM 83 O O . DPN A 1 12 ? 9.918 -12.037 5.489 1.00 7.90 ? 12 DPN A O 1
HETATM 84 C CB . DPN A 1 12 ? 12.681 -11.765 7.438 1.00 7.75 ? 12 DPN A CB 1
HETATM 85 C CG . DPN A 1 12 ? 14.154 -12.012 7.524 1.00 7.17 ? 12 DPN A CG 1
HETATM 86 C CD1 . DPN A 1 12 ? 15.063 -10.985 7.304 1.00 8.30 ? 12 DPN A CD1 1
HETATM 87 C CD2 . DPN A 1 12 ? 14.637 -13.282 7.778 1.00 8.47 ? 12 DPN A CD2 1
HETATM 88 C CE1 . DPN A 1 12 ? 16.425 -11.228 7.354 1.00 8.96 ? 12 DPN A CE1 1
HETATM 89 C CE2 . DPN A 1 12 ? 15.996 -13.528 7.828 1.00 9.35 ? 12 DPN A CE2 1
HETATM 90 C CZ . DPN A 1 12 ? 16.888 -12.498 7.610 1.00 9.16 ? 12 DPN A CZ 1
HETATM 91 N N . DPR A 1 13 ? 10.297 -10.043 6.499 1.00 9.83 ? 13 DPR A N 1
HETATM 92 C CA . DPR A 1 13 ? 8.880 -9.654 6.430 1.00 10.31 ? 13 DPR A CA 1
HETATM 93 C CB . DPR A 1 13 ? 8.866 -8.267 7.085 1.00 13.31 ? 13 DPR A CB 1
HETATM 94 C CG . DPR A 1 13 ? 10.225 -7.729 6.831 1.00 13.51 ? 13 DPR A CG 1
HETATM 95 C CD . DPR A 1 13 ? 11.139 -8.916 6.947 1.00 11.17 ? 13 DPR A CD 1
HETATM 96 C C . DPR A 1 13 ? 7.916 -10.577 7.166 1.00 10.57 ? 13 DPR A C 1
HETATM 97 O O . DPR A 1 13 ? 6.719 -10.544 6.868 1.00 12.88 ? 13 DPR A O 1
HETATM 98 N N . DAS A 1 14 ? 8.409 -11.369 8.108 1.00 9.22 ? 14 DAS A N 1
HETATM 99 C CA . DAS A 1 14 ? 7.554 -12.333 8.792 1.00 9.71 ? 14 DAS A CA 1
HETATM 100 C C . DAS A 1 14 ? 7.464 -13.658 8.030 1.00 8.71 ? 14 DAS A C 1
HETATM 101 O O . DAS A 1 14 ? 6.914 -14.635 8.543 1.00 10.52 ? 14 DAS A O 1
HETATM 102 C CB . DAS A 1 14 ? 8.025 -12.561 10.231 1.00 10.84 ? 14 DAS A CB 1
HETATM 103 C CG . DAS A 1 14 ? 9.443 -13.103 10.318 1.00 10.12 ? 14 DAS A CG 1
HETATM 104 O OD1 . DAS A 1 14 ? 10.090 -13.340 9.270 1.00 9.03 ? 14 DAS A OD1 1
HETATM 105 O OD2 . DAS A 1 14 ? 9.923 -13.290 11.453 1.00 11.65 ? 14 DAS A OD2 1
HETATM 106 O O . HOH B 2 . ? 5.334 -15.623 10.441 1.00 13.27 ? 101 HOH A O 1
HETATM 107 O O . HOH B 2 . ? 12.440 -13.955 12.139 1.00 9.77 ? 102 HOH A O 1
HETATM 108 O O . HOH B 2 . ? 8.289 -12.503 13.494 1.00 20.51 ? 103 HOH A O 1
HETATM 109 O O . HOH B 2 . ? 15.875 -19.330 9.222 1.00 10.53 ? 104 HOH A O 1
HETATM 110 O O . HOH B 2 . ? 18.299 -14.711 -2.836 1.00 10.42 ? 105 HOH A O 1
HETATM 111 O O . HOH B 2 . ? 9.104 -15.949 2.937 1.00 17.07 ? 106 HOH A O 1
HETATM 112 O O . HOH B 2 . ? 14.770 -21.263 10.696 1.00 18.09 ? 107 HOH A O 1
#