data_4RP2
#
_entry.id 4RP2
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.379
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 4RP2 pdb_00004rp2 10.2210/pdb4rp2/pdb
NDB NA3274 ? ?
RCSB RCSB087619 ? ?
WWPDB D_1000087619 ? ?
#
loop_
_pdbx_database_related.db_name
_pdbx_database_related.db_id
_pdbx_database_related.details
_pdbx_database_related.content_type
PDB 4RNK 'Sequence and structure of a self-assembled 3-D DNA crystal: D(GGAAAATTTGGAG)' unspecified
PDB 1P1Y 'Crystal structure of a continuous three-dimensional DNA lattice.' unspecified
PDB 4RO4 . unspecified
PDB 4RO7 . unspecified
PDB 4RO8 . unspecified
PDB 4ROG . unspecified
PDB 4ROK . unspecified
PDB 4RON . unspecified
PDB 4ROO . unspecified
PDB 4ROY . unspecified
PDB 4ROZ . unspecified
PDB 4RP0 . unspecified
PDB 4RP1 . unspecified
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 4RP2
_pdbx_database_status.recvd_initial_deposition_date 2014-10-29
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.SG_entry ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_nmr_data ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Saoji, M.M.' 1
'Paukstelis, P.J.' 2
#
loop_
_citation.id
_citation.title
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation.journal_id_ASTM
_citation.country
_citation.journal_id_ISSN
_citation.journal_id_CSD
_citation.book_publisher
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_DOI
primary 'Probing the role of sequence in the assembly of three-dimensional DNA crystals.' Biopolymers 103 618 626 2015 BIPMAA US
0006-3525 0161 ? 26015367 10.1002/bip.22688
1 'Crystal structure of a continuous three-dimensional DNA lattice.' Chem.Biol. 11 1119 1126 2004 CBOLE2 UK
1074-5521 2050 ? 15324813 10.1016/j.chembiol.2004.05.021
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Saoji, M.' 1 ?
primary 'Zhang, D.' 2 ?
primary 'Paukstelis, P.J.' 3 ?
1 'Paukstelis, P.J.' 4 ?
1 'Nowakowski, J.' 5 ?
1 'Birktoft, J.J.' 6 ?
1 'Seeman, N.C.' 7 ?
#
_cell.entry_id 4RP2
_cell.length_a 40.780
_cell.length_b 40.780
_cell.length_c 51.813
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 120.00
_cell.Z_PDB 6
_cell.pdbx_unique_axis ?
_cell.length_a_esd ?
_cell.length_b_esd ?
_cell.length_c_esd ?
_cell.angle_alpha_esd ?
_cell.angle_beta_esd ?
_cell.angle_gamma_esd ?
#
_symmetry.entry_id 4RP2
_symmetry.space_group_name_H-M 'P 64'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 172
_symmetry.space_group_name_Hall ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn 'D(GGATAGCTAGGAG)' 4080.671 1 ? ? ? ?
2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ?
3 water nat water 18.015 3 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type polydeoxyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code '(DG)(DG)(DA)(DT)(DA)(DG)(DC)(DT)(DA)(DG)(DG)(DA)(DG)'
_entity_poly.pdbx_seq_one_letter_code_can GGATAGCTAGGAG
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 DG n
1 2 DG n
1 3 DA n
1 4 DT n
1 5 DA n
1 6 DG n
1 7 DC n
1 8 DT n
1 9 DA n
1 10 DG n
1 11 DG n
1 12 DA n
1 13 DG n
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num ?
_pdbx_entity_src_syn.pdbx_end_seq_num ?
_pdbx_entity_src_syn.organism_scientific ?
_pdbx_entity_src_syn.organism_common_name ?
_pdbx_entity_src_syn.ncbi_taxonomy_id ?
_pdbx_entity_src_syn.details 'DNA molecule synthesized using a DNA synthesizer.'
#
_struct_ref.id 1
_struct_ref.db_name PDB
_struct_ref.db_code 4RP2
_struct_ref.pdbx_db_accession 4RP2
_struct_ref.entity_id 1
_struct_ref.pdbx_align_begin ?
_struct_ref.pdbx_seq_one_letter_code GGATAGCTAGGAG
_struct_ref.pdbx_db_isoform ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 4RP2
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 13
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession 4RP2
_struct_ref_seq.db_align_beg 1
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 13
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 13
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221
DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208
HOH non-polymer . WATER ? 'H2 O' 18.015
MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305
#
_exptl.entry_id 4RP2
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number 1
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 3.05
_exptl_crystal.density_percent_sol 59.64
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.preparation ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method EVAPORATION
_exptl_crystal_grow.temp 298
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH ?
_exptl_crystal_grow.pdbx_details
'120mM Magnesium Formate, 50mM Lithium Chloride, 10% MPD, pH none, EVAPORATION, temperature 298K'
_exptl_crystal_grow.pdbx_pH_range none
#
_diffrn.id 1
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector PIXEL
_diffrn_detector.type 'DECTRIS PILATUS 6M-F'
_diffrn_detector.pdbx_collection_date 2014-06-29
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator 'Si(111)'
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 0.979200
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source SYNCHROTRON
_diffrn_source.type 'APS BEAMLINE 24-ID-C'
_diffrn_source.pdbx_synchrotron_site APS
_diffrn_source.pdbx_synchrotron_beamline 24-ID-C
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list 0.979200
#
_reflns.entry_id 4RP2
_reflns.observed_criterion_sigma_I 0
_reflns.observed_criterion_sigma_F 0
_reflns.d_resolution_low 35.32
_reflns.d_resolution_high 2.32
_reflns.number_obs 2079
_reflns.number_all ?
_reflns.percent_possible_obs ?
_reflns.pdbx_Rmerge_I_obs 0.030
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_sigmaI 21.1
_reflns.B_iso_Wilson_estimate ?
_reflns.pdbx_redundancy 2.9
_reflns.R_free_details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_ordinal 1
_reflns.pdbx_diffrn_id 1
#
_reflns_shell.d_res_high 2.32
_reflns_shell.d_res_low 2.45
_reflns_shell.percent_possible_all ?
_reflns_shell.Rmerge_I_obs 0.582
_reflns_shell.pdbx_Rsym_value ?
_reflns_shell.meanI_over_sigI_obs 1.6
_reflns_shell.pdbx_redundancy 2.9
_reflns_shell.percent_possible_obs ?
_reflns_shell.number_unique_all 317
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_unique_obs ?
_reflns_shell.pdbx_chi_squared ?
_reflns_shell.pdbx_ordinal 1
_reflns_shell.pdbx_diffrn_id 1
#
_refine.entry_id 4RP2
_refine.ls_number_reflns_obs 1878
_refine.ls_number_reflns_all ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F .
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 35.32
_refine.ls_d_res_high 2.32
_refine.ls_percent_reflns_obs 95.39
_refine.ls_R_factor_obs 0.20549
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work 0.20293
_refine.ls_R_factor_R_free 0.23145
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free 9.3
_refine.ls_number_reflns_R_free 192
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.correlation_coeff_Fo_to_Fc 0.970
_refine.correlation_coeff_Fo_to_Fc_free 0.962
_refine.B_iso_mean 91.721
_refine.aniso_B[1][1] -0.04
_refine.aniso_B[2][2] -0.04
_refine.aniso_B[3][3] 0.14
_refine.aniso_B[1][2] -0.02
_refine.aniso_B[1][3] 0.00
_refine.aniso_B[2][3] 0.00
_refine.solvent_model_details MASK
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_solvent_vdw_probe_radii 1.00
_refine.pdbx_solvent_ion_probe_radii 0.70
_refine.pdbx_solvent_shrinkage_radii 0.70
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS'
_refine.pdbx_starting_model 'PDB ENTRY 1p1y'
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD'
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_overall_ESU_R 0.273
_refine.pdbx_overall_ESU_R_Free 0.209
_refine.overall_SU_ML 0.184
_refine.pdbx_overall_phase_error ?
_refine.overall_SU_B 20.960
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.ls_redundancy_reflns_obs ?
_refine.B_iso_min ?
_refine.B_iso_max ?
_refine.overall_SU_R_free ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_diffrn_id 1
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 254
_refine_hist.pdbx_number_atoms_ligand 1
_refine_hist.number_atoms_solvent 3
_refine_hist.number_atoms_total 258
_refine_hist.d_res_high 2.32
_refine_hist.d_res_low 35.32
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_restraint_function
_refine_ls_restr.pdbx_refine_id
r_bond_refined_d 0.006 0.011 ? 286 ? 'X-RAY DIFFRACTION'
r_bond_other_d 0.002 0.020 ? 135 ? 'X-RAY DIFFRACTION'
r_angle_refined_deg 1.161 1.155 ? 442 ? 'X-RAY DIFFRACTION'
r_angle_other_deg 3.517 3.000 ? 319 ? 'X-RAY DIFFRACTION'
r_dihedral_angle_1_deg ? ? ? ? ? 'X-RAY DIFFRACTION'
r_dihedral_angle_2_deg ? ? ? ? ? 'X-RAY DIFFRACTION'
r_dihedral_angle_3_deg ? ? ? ? ? 'X-RAY DIFFRACTION'
r_dihedral_angle_4_deg ? ? ? ? ? 'X-RAY DIFFRACTION'
r_chiral_restr 0.132 0.200 ? 36 ? 'X-RAY DIFFRACTION'
r_gen_planes_refined 0.009 0.020 ? 151 ? 'X-RAY DIFFRACTION'
r_gen_planes_other 0.001 0.020 ? 62 ? 'X-RAY DIFFRACTION'
r_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION'
r_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION'
r_nbtor_refined ? ? ? ? ? 'X-RAY DIFFRACTION'
r_nbtor_other ? ? ? ? ? 'X-RAY DIFFRACTION'
r_xyhbond_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION'
r_xyhbond_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION'
r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION'
r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION'
r_symmetry_vdw_refined ? ? ? ? ? 'X-RAY DIFFRACTION'
r_symmetry_vdw_other ? ? ? ? ? 'X-RAY DIFFRACTION'
r_symmetry_hbond_refined ? ? ? ? ? 'X-RAY DIFFRACTION'
r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION'
r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION'
r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION'
r_mcbond_it ? ? ? ? ? 'X-RAY DIFFRACTION'
r_mcbond_other ? ? ? ? ? 'X-RAY DIFFRACTION'
r_mcangle_it ? ? ? ? ? 'X-RAY DIFFRACTION'
r_mcangle_other ? ? ? ? ? 'X-RAY DIFFRACTION'
r_scbond_it 4.314 5.067 ? 286 ? 'X-RAY DIFFRACTION'
r_scbond_other 4.263 5.041 ? 284 ? 'X-RAY DIFFRACTION'
r_scangle_it ? ? ? ? ? 'X-RAY DIFFRACTION'
r_scangle_other 6.684 7.613 ? 439 ? 'X-RAY DIFFRACTION'
r_long_range_B_refined 7.683 48.140 ? 419 ? 'X-RAY DIFFRACTION'
r_long_range_B_other 7.684 48.002 ? 419 ? 'X-RAY DIFFRACTION'
r_rigid_bond_restr ? ? ? ? ? 'X-RAY DIFFRACTION'
r_sphericity_free ? ? ? ? ? 'X-RAY DIFFRACTION'
r_sphericity_bonded ? ? ? ? ? 'X-RAY DIFFRACTION'
#
_refine_ls_shell.pdbx_total_number_of_bins_used 20
_refine_ls_shell.d_res_high 2.321
_refine_ls_shell.d_res_low 2.381
_refine_ls_shell.number_reflns_R_work 147
_refine_ls_shell.R_factor_R_work 0.574
_refine_ls_shell.percent_reflns_obs 96.99
_refine_ls_shell.R_factor_R_free 0.440
_refine_ls_shell.R_factor_R_free_error ?
_refine_ls_shell.percent_reflns_R_free ?
_refine_ls_shell.number_reflns_R_free 14
_refine_ls_shell.number_reflns_all ?
_refine_ls_shell.R_factor_all ?
_refine_ls_shell.number_reflns_obs ?
_refine_ls_shell.redundancy_reflns_obs ?
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
#
_struct.entry_id 4RP2
_struct.title 'Sequence and structure of a self-assembled 3-D DNA crystal: D(GGATAGCTAGGAG)'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 4RP2
_struct_keywords.pdbx_keywords DNA
_struct_keywords.text 'Self-assembling 3D DNA crystal, DNA'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 3 ?
#
_struct_biol.id 1
_struct_biol.details ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
metalc1 metalc ? ? B MG . MG ? ? ? 1_555 C HOH . O ? ? A MG 101 A HOH 202 1_555 ? ? ? ? ? ? ? 1.902 ? ?
metalc2 metalc ? ? B MG . MG ? ? ? 1_555 C HOH . O ? ? A MG 101 A HOH 203 1_555 ? ? ? ? ? ? ? 2.304 ? ?
hydrog1 hydrog ? ? A DT 4 N3 ? ? ? 1_555 A DA 9 N1 ? ? A DT 4 A DA 9 4_545 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog2 hydrog ? ? A DT 4 O4 ? ? ? 1_555 A DA 9 N6 ? ? A DT 4 A DA 9 4_545 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog3 hydrog ? ? A DA 5 N1 ? ? ? 1_555 A DT 8 N3 ? ? A DA 5 A DT 8 4_545 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog4 hydrog ? ? A DA 5 N6 ? ? ? 1_555 A DT 8 O4 ? ? A DA 5 A DT 8 4_545 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog5 hydrog ? ? A DG 6 N1 ? ? ? 1_555 A DC 7 N3 ? ? A DG 6 A DC 7 4_545 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog6 hydrog ? ? A DG 6 N2 ? ? ? 1_555 A DC 7 O2 ? ? A DG 6 A DC 7 4_545 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog7 hydrog ? ? A DG 6 O6 ? ? ? 1_555 A DC 7 N4 ? ? A DG 6 A DC 7 4_545 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog8 hydrog ? ? A DC 7 N3 ? ? ? 1_555 A DG 6 N1 ? ? A DC 7 A DG 6 4_545 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog9 hydrog ? ? A DC 7 N4 ? ? ? 1_555 A DG 6 O6 ? ? A DC 7 A DG 6 4_545 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog10 hydrog ? ? A DC 7 O2 ? ? ? 1_555 A DG 6 N2 ? ? A DC 7 A DG 6 4_545 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog11 hydrog ? ? A DT 8 N3 ? ? ? 1_555 A DA 5 N1 ? ? A DT 8 A DA 5 4_545 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog12 hydrog ? ? A DT 8 O4 ? ? ? 1_555 A DA 5 N6 ? ? A DT 8 A DA 5 4_545 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog13 hydrog ? ? A DA 9 N1 ? ? ? 1_555 A DT 4 N3 ? ? A DA 9 A DT 4 4_545 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog14 hydrog ? ? A DA 9 N6 ? ? ? 1_555 A DT 4 O4 ? ? A DA 9 A DT 4 4_545 ? ? ? ? ? ? WATSON-CRICK ? ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
metalc ? ?
hydrog ? ?
#
_struct_site.id AC1
_struct_site.pdbx_evidence_code Software
_struct_site.pdbx_auth_asym_id A
_struct_site.pdbx_auth_comp_id MG
_struct_site.pdbx_auth_seq_id 101
_struct_site.pdbx_auth_ins_code ?
_struct_site.pdbx_num_residues 3
_struct_site.details 'BINDING SITE FOR RESIDUE MG A 101'
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 3 DA A 3 ? DA A 3 . ? 1_555 ?
2 AC1 3 HOH C . ? HOH A 202 . ? 1_555 ?
3 AC1 3 HOH C . ? HOH A 203 . ? 1_555 ?
#
_database_PDB_matrix.entry_id 4RP2
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_atom_sites.entry_id 4RP2
_atom_sites.fract_transf_matrix[1][1] 0.024522
_atom_sites.fract_transf_matrix[1][2] 0.014158
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] -0.000000
_atom_sites.fract_transf_matrix[2][2] 0.028315
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] -0.000000
_atom_sites.fract_transf_matrix[3][3] 0.019300
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
MG
N
O
P
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 O "O5'" . DG A 1 1 ? 0.984 -22.850 7.666 1.00 106.04 ? 1 DG A "O5'" 1
ATOM 2 C "C5'" . DG A 1 1 ? -0.060 -23.481 6.887 1.00 101.33 ? 1 DG A "C5'" 1
ATOM 3 C "C4'" . DG A 1 1 ? 0.364 -23.559 5.439 1.00 94.67 ? 1 DG A "C4'" 1
ATOM 4 O "O4'" . DG A 1 1 ? 0.014 -22.456 4.569 1.00 90.18 ? 1 DG A "O4'" 1
ATOM 5 C "C3'" . DG A 1 1 ? 1.781 -23.985 5.068 1.00 92.81 ? 1 DG A "C3'" 1
ATOM 6 O "O3'" . DG A 1 1 ? 1.753 -24.891 3.964 1.00 96.30 ? 1 DG A "O3'" 1
ATOM 7 C "C2'" . DG A 1 1 ? 2.377 -22.667 4.618 1.00 85.45 ? 1 DG A "C2'" 1
ATOM 8 C "C1'" . DG A 1 1 ? 1.192 -22.035 3.880 1.00 83.11 ? 1 DG A "C1'" 1
ATOM 9 N N9 . DG A 1 1 ? 1.217 -20.578 3.868 1.00 76.60 ? 1 DG A N9 1
ATOM 10 C C8 . DG A 1 1 ? 1.303 -19.761 2.767 1.00 75.85 ? 1 DG A C8 1
ATOM 11 N N7 . DG A 1 1 ? 1.344 -18.492 3.073 1.00 74.23 ? 1 DG A N7 1
ATOM 12 C C5 . DG A 1 1 ? 1.288 -18.471 4.459 1.00 72.10 ? 1 DG A C5 1
ATOM 13 C C6 . DG A 1 1 ? 1.296 -17.377 5.362 1.00 72.83 ? 1 DG A C6 1
ATOM 14 O O6 . DG A 1 1 ? 1.355 -16.168 5.108 1.00 71.22 ? 1 DG A O6 1
ATOM 15 N N1 . DG A 1 1 ? 1.221 -17.805 6.684 1.00 74.98 ? 1 DG A N1 1
ATOM 16 C C2 . DG A 1 1 ? 1.152 -19.117 7.086 1.00 80.42 ? 1 DG A C2 1
ATOM 17 N N2 . DG A 1 1 ? 1.085 -19.331 8.408 1.00 91.57 ? 1 DG A N2 1
ATOM 18 N N3 . DG A 1 1 ? 1.153 -20.145 6.256 1.00 79.05 ? 1 DG A N3 1
ATOM 19 C C4 . DG A 1 1 ? 1.219 -19.751 4.966 1.00 75.80 ? 1 DG A C4 1
ATOM 20 P P . DG A 1 2 ? 3.129 -25.456 3.344 1.00 99.40 ? 2 DG A P 1
ATOM 21 O OP1 . DG A 1 2 ? 2.773 -26.507 2.349 1.00 101.59 ? 2 DG A OP1 1
ATOM 22 O OP2 . DG A 1 2 ? 4.056 -25.770 4.473 1.00 101.38 ? 2 DG A OP2 1
ATOM 23 O "O5'" . DG A 1 2 ? 3.763 -24.198 2.583 1.00 92.22 ? 2 DG A "O5'" 1
ATOM 24 C "C5'" . DG A 1 2 ? 3.294 -23.734 1.293 1.00 78.72 ? 2 DG A "C5'" 1
ATOM 25 C "C4'" . DG A 1 2 ? 4.203 -22.651 0.760 1.00 74.21 ? 2 DG A "C4'" 1
ATOM 26 O "O4'" . DG A 1 2 ? 4.067 -21.431 1.526 1.00 71.01 ? 2 DG A "O4'" 1
ATOM 27 C "C3'" . DG A 1 2 ? 5.693 -22.992 0.793 1.00 74.06 ? 2 DG A "C3'" 1
ATOM 28 O "O3'" . DG A 1 2 ? 6.313 -22.481 -0.385 1.00 74.51 ? 2 DG A "O3'" 1
ATOM 29 C "C2'" . DG A 1 2 ? 6.210 -22.226 1.993 1.00 70.98 ? 2 DG A "C2'" 1
ATOM 30 C "C1'" . DG A 1 2 ? 5.353 -20.986 1.937 1.00 68.58 ? 2 DG A "C1'" 1
ATOM 31 N N9 . DG A 1 2 ? 5.200 -20.293 3.207 1.00 68.25 ? 2 DG A N9 1
ATOM 32 C C8 . DG A 1 2 ? 5.263 -20.830 4.470 1.00 69.63 ? 2 DG A C8 1
ATOM 33 N N7 . DG A 1 2 ? 5.081 -19.944 5.410 1.00 72.61 ? 2 DG A N7 1
ATOM 34 C C5 . DG A 1 2 ? 4.886 -18.754 4.727 1.00 65.08 ? 2 DG A C5 1
ATOM 35 C C6 . DG A 1 2 ? 4.648 -17.449 5.214 1.00 68.48 ? 2 DG A C6 1
ATOM 36 O O6 . DG A 1 2 ? 4.550 -17.074 6.388 1.00 75.43 ? 2 DG A O6 1
ATOM 37 N N1 . DG A 1 2 ? 4.521 -16.530 4.176 1.00 67.12 ? 2 DG A N1 1
ATOM 38 C C2 . DG A 1 2 ? 4.623 -16.831 2.838 1.00 64.10 ? 2 DG A C2 1
ATOM 39 N N2 . DG A 1 2 ? 4.474 -15.809 1.985 1.00 63.43 ? 2 DG A N2 1
ATOM 40 N N3 . DG A 1 2 ? 4.849 -18.047 2.373 1.00 59.69 ? 2 DG A N3 1
ATOM 41 C C4 . DG A 1 2 ? 4.953 -18.954 3.366 1.00 63.50 ? 2 DG A C4 1
ATOM 42 P P . DA A 1 3 ? 7.227 -23.419 -1.281 1.00 75.88 ? 3 DA A P 1
ATOM 43 O OP1 . DA A 1 3 ? 6.765 -24.834 -1.120 1.00 76.59 ? 3 DA A OP1 1
ATOM 44 O OP2 . DA A 1 3 ? 8.655 -23.085 -0.981 1.00 86.50 ? 3 DA A OP2 1
ATOM 45 O "O5'" . DA A 1 3 ? 6.861 -22.904 -2.742 1.00 78.17 ? 3 DA A "O5'" 1
ATOM 46 C "C5'" . DA A 1 3 ? 5.722 -22.059 -2.969 1.00 78.72 ? 3 DA A "C5'" 1
ATOM 47 C "C4'" . DA A 1 3 ? 5.838 -21.349 -4.299 1.00 77.56 ? 3 DA A "C4'" 1
ATOM 48 O "O4'" . DA A 1 3 ? 6.065 -19.945 -4.046 1.00 73.66 ? 3 DA A "O4'" 1
ATOM 49 C "C3'" . DA A 1 3 ? 7.010 -21.771 -5.179 1.00 81.12 ? 3 DA A "C3'" 1
ATOM 50 O "O3'" . DA A 1 3 ? 6.799 -21.348 -6.547 1.00 94.36 ? 3 DA A "O3'" 1
ATOM 51 C "C2'" . DA A 1 3 ? 8.142 -20.952 -4.577 1.00 76.24 ? 3 DA A "C2'" 1
ATOM 52 C "C1'" . DA A 1 3 ? 7.437 -19.625 -4.275 1.00 70.81 ? 3 DA A "C1'" 1
ATOM 53 N N9 . DA A 1 3 ? 7.898 -18.849 -3.124 1.00 63.93 ? 3 DA A N9 1
ATOM 54 C C8 . DA A 1 3 ? 7.875 -19.233 -1.806 1.00 66.44 ? 3 DA A C8 1
ATOM 55 N N7 . DA A 1 3 ? 8.281 -18.301 -0.978 1.00 65.82 ? 3 DA A N7 1
ATOM 56 C C5 . DA A 1 3 ? 8.563 -17.221 -1.803 1.00 67.55 ? 3 DA A C5 1
ATOM 57 C C6 . DA A 1 3 ? 9.017 -15.918 -1.533 1.00 71.72 ? 3 DA A C6 1
ATOM 58 N N6 . DA A 1 3 ? 9.303 -15.474 -0.308 1.00 80.34 ? 3 DA A N6 1
ATOM 59 N N1 . DA A 1 3 ? 9.177 -15.077 -2.580 1.00 66.90 ? 3 DA A N1 1
ATOM 60 C C2 . DA A 1 3 ? 8.906 -15.530 -3.809 1.00 68.40 ? 3 DA A C2 1
ATOM 61 N N3 . DA A 1 3 ? 8.463 -16.731 -4.188 1.00 69.32 ? 3 DA A N3 1
ATOM 62 C C4 . DA A 1 3 ? 8.313 -17.539 -3.125 1.00 66.58 ? 3 DA A C4 1
ATOM 63 P P . DT A 1 4 ? 6.093 -22.293 -7.700 1.00 92.42 ? 4 DT A P 1
ATOM 64 O OP1 . DT A 1 4 ? 5.890 -21.432 -8.904 1.00 91.22 ? 4 DT A OP1 1
ATOM 65 O OP2 . DT A 1 4 ? 4.911 -22.972 -7.104 1.00 92.13 ? 4 DT A OP2 1
ATOM 66 O "O5'" . DT A 1 4 ? 7.231 -23.358 -8.071 1.00 92.66 ? 4 DT A "O5'" 1
ATOM 67 C "C5'" . DT A 1 4 ? 7.136 -24.755 -7.675 1.00 96.44 ? 4 DT A "C5'" 1
ATOM 68 C "C4'" . DT A 1 4 ? 8.087 -25.634 -8.460 1.00 97.54 ? 4 DT A "C4'" 1
ATOM 69 O "O4'" . DT A 1 4 ? 7.432 -26.120 -9.656 1.00 100.33 ? 4 DT A "O4'" 1
ATOM 70 C "C3'" . DT A 1 4 ? 9.373 -24.965 -8.943 1.00 97.16 ? 4 DT A "C3'" 1
ATOM 71 O "O3'" . DT A 1 4 ? 10.474 -25.883 -9.066 1.00 109.27 ? 4 DT A "O3'" 1
ATOM 72 C "C2'" . DT A 1 4 ? 8.997 -24.488 -10.330 1.00 95.71 ? 4 DT A "C2'" 1
ATOM 73 C "C1'" . DT A 1 4 ? 8.035 -25.558 -10.817 1.00 94.22 ? 4 DT A "C1'" 1
ATOM 74 N N1 . DT A 1 4 ? 6.966 -25.010 -11.665 1.00 88.66 ? 4 DT A N1 1
ATOM 75 C C2 . DT A 1 4 ? 7.027 -25.214 -13.025 1.00 92.11 ? 4 DT A C2 1
ATOM 76 O O2 . DT A 1 4 ? 7.909 -25.862 -13.565 1.00 91.58 ? 4 DT A O2 1
ATOM 77 N N3 . DT A 1 4 ? 5.997 -24.647 -13.732 1.00 93.30 ? 4 DT A N3 1
ATOM 78 C C4 . DT A 1 4 ? 4.943 -23.908 -13.226 1.00 89.96 ? 4 DT A C4 1
ATOM 79 O O4 . DT A 1 4 ? 4.089 -23.462 -13.985 1.00 97.72 ? 4 DT A O4 1
ATOM 80 C C5 . DT A 1 4 ? 4.951 -23.725 -11.795 1.00 84.62 ? 4 DT A C5 1
ATOM 81 C C7 . DT A 1 4 ? 3.854 -22.936 -11.156 1.00 86.33 ? 4 DT A C7 1
ATOM 82 C C6 . DT A 1 4 ? 5.955 -24.267 -11.098 1.00 84.39 ? 4 DT A C6 1
ATOM 83 P P . DA A 1 5 ? 11.987 -25.422 -8.691 1.00 109.67 ? 5 DA A P 1
ATOM 84 O OP1 . DA A 1 5 ? 12.327 -26.048 -7.382 1.00 110.74 ? 5 DA A OP1 1
ATOM 85 O OP2 . DA A 1 5 ? 12.100 -23.941 -8.862 1.00 103.96 ? 5 DA A OP2 1
ATOM 86 O "O5'" . DA A 1 5 ? 12.894 -26.080 -9.827 1.00 109.88 ? 5 DA A "O5'" 1
ATOM 87 C "C5'" . DA A 1 5 ? 12.343 -26.565 -11.064 1.00 115.16 ? 5 DA A "C5'" 1
ATOM 88 C "C4'" . DA A 1 5 ? 13.317 -26.387 -12.207 1.00 120.21 ? 5 DA A "C4'" 1
ATOM 89 O "O4'" . DA A 1 5 ? 12.672 -25.677 -13.287 1.00 115.00 ? 5 DA A "O4'" 1
ATOM 90 C "C3'" . DA A 1 5 ? 14.578 -25.578 -11.928 1.00 119.26 ? 5 DA A "C3'" 1
ATOM 91 O "O3'" . DA A 1 5 ? 15.541 -26.086 -12.866 1.00 131.84 ? 5 DA A "O3'" 1
ATOM 92 C "C2'" . DA A 1 5 ? 14.103 -24.150 -12.155 1.00 112.31 ? 5 DA A "C2'" 1
ATOM 93 C "C1'" . DA A 1 5 ? 13.030 -24.297 -13.243 1.00 110.54 ? 5 DA A "C1'" 1
ATOM 94 N N9 . DA A 1 5 ? 11.792 -23.526 -13.087 1.00 99.54 ? 5 DA A N9 1
ATOM 95 C C8 . DA A 1 5 ? 11.275 -22.911 -11.972 1.00 93.60 ? 5 DA A C8 1
ATOM 96 N N7 . DA A 1 5 ? 10.113 -22.338 -12.176 1.00 85.22 ? 5 DA A N7 1
ATOM 97 C C5 . DA A 1 5 ? 9.845 -22.596 -13.512 1.00 85.62 ? 5 DA A C5 1
ATOM 98 C C6 . DA A 1 5 ? 8.765 -22.254 -14.341 1.00 85.04 ? 5 DA A C6 1
ATOM 99 N N6 . DA A 1 5 ? 7.715 -21.541 -13.929 1.00 86.26 ? 5 DA A N6 1
ATOM 100 N N1 . DA A 1 5 ? 8.809 -22.656 -15.630 1.00 89.24 ? 5 DA A N1 1
ATOM 101 C C2 . DA A 1 5 ? 9.867 -23.367 -16.044 1.00 96.18 ? 5 DA A C2 1
ATOM 102 N N3 . DA A 1 5 ? 10.937 -23.761 -15.356 1.00 95.04 ? 5 DA A N3 1
ATOM 103 C C4 . DA A 1 5 ? 10.865 -23.336 -14.083 1.00 92.23 ? 5 DA A C4 1
ATOM 104 P P . DG A 1 6 ? 16.964 -25.387 -13.087 1.00 132.81 ? 6 DG A P 1
ATOM 105 O OP1 . DG A 1 6 ? 17.961 -26.468 -13.348 1.00 132.23 ? 6 DG A OP1 1
ATOM 106 O OP2 . DG A 1 6 ? 17.181 -24.419 -11.981 1.00 131.08 ? 6 DG A OP2 1
ATOM 107 O "O5'" . DG A 1 6 ? 16.733 -24.518 -14.403 1.00 121.42 ? 6 DG A "O5'" 1
ATOM 108 C "C5'" . DG A 1 6 ? 16.013 -25.042 -15.536 1.00 124.37 ? 6 DG A "C5'" 1
ATOM 109 C "C4'" . DG A 1 6 ? 15.835 -23.951 -16.562 1.00 119.59 ? 6 DG A "C4'" 1
ATOM 110 O "O4'" . DG A 1 6 ? 14.599 -23.239 -16.309 1.00 114.74 ? 6 DG A "O4'" 1
ATOM 111 C "C3'" . DG A 1 6 ? 16.923 -22.885 -16.508 1.00 117.56 ? 6 DG A "C3'" 1
ATOM 112 O "O3'" . DG A 1 6 ? 17.072 -22.361 -17.821 1.00 130.19 ? 6 DG A "O3'" 1
ATOM 113 C "C2'" . DG A 1 6 ? 16.315 -21.839 -15.595 1.00 109.59 ? 6 DG A "C2'" 1
ATOM 114 C "C1'" . DG A 1 6 ? 14.897 -21.866 -16.113 1.00 104.74 ? 6 DG A "C1'" 1
ATOM 115 N N9 . DG A 1 6 ? 13.876 -21.282 -15.249 1.00 92.49 ? 6 DG A N9 1
ATOM 116 C C8 . DG A 1 6 ? 13.894 -21.149 -13.881 1.00 85.67 ? 6 DG A C8 1
ATOM 117 N N7 . DG A 1 6 ? 12.834 -20.548 -13.411 1.00 83.48 ? 6 DG A N7 1
ATOM 118 C C5 . DG A 1 6 ? 12.083 -20.243 -14.539 1.00 84.68 ? 6 DG A C5 1
ATOM 119 C C6 . DG A 1 6 ? 10.824 -19.588 -14.664 1.00 80.41 ? 6 DG A C6 1
ATOM 120 O O6 . DG A 1 6 ? 10.106 -19.116 -13.772 1.00 74.54 ? 6 DG A O6 1
ATOM 121 N N1 . DG A 1 6 ? 10.416 -19.511 -15.993 1.00 75.04 ? 6 DG A N1 1
ATOM 122 C C2 . DG A 1 6 ? 11.129 -19.992 -17.064 1.00 81.79 ? 6 DG A C2 1
ATOM 123 N N2 . DG A 1 6 ? 10.576 -19.815 -18.273 1.00 85.85 ? 6 DG A N2 1
ATOM 124 N N3 . DG A 1 6 ? 12.300 -20.599 -16.962 1.00 86.98 ? 6 DG A N3 1
ATOM 125 C C4 . DG A 1 6 ? 12.714 -20.688 -15.681 1.00 87.06 ? 6 DG A C4 1
ATOM 126 P P . DC A 1 7 ? 18.288 -21.391 -18.154 1.00 137.24 ? 7 DC A P 1
ATOM 127 O OP1 . DC A 1 7 ? 19.352 -22.198 -18.803 1.00 152.06 ? 7 DC A OP1 1
ATOM 128 O OP2 . DC A 1 7 ? 18.591 -20.575 -16.945 1.00 131.88 ? 7 DC A OP2 1
ATOM 129 O "O5'" . DC A 1 7 ? 17.685 -20.412 -19.253 1.00 135.63 ? 7 DC A "O5'" 1
ATOM 130 C "C5'" . DC A 1 7 ? 16.876 -20.891 -20.342 1.00 133.16 ? 7 DC A "C5'" 1
ATOM 131 C "C4'" . DC A 1 7 ? 15.917 -19.795 -20.739 1.00 126.41 ? 7 DC A "C4'" 1
ATOM 132 O "O4'" . DC A 1 7 ? 15.009 -19.552 -19.637 1.00 115.39 ? 7 DC A "O4'" 1
ATOM 133 C "C3'" . DC A 1 7 ? 16.599 -18.452 -21.029 1.00 123.39 ? 7 DC A "C3'" 1
ATOM 134 O "O3'" . DC A 1 7 ? 16.126 -17.897 -22.259 1.00 137.61 ? 7 DC A "O3'" 1
ATOM 135 C "C2'" . DC A 1 7 ? 16.232 -17.596 -19.830 1.00 108.60 ? 7 DC A "C2'" 1
ATOM 136 C "C1'" . DC A 1 7 ? 14.887 -18.160 -19.453 1.00 100.31 ? 7 DC A "C1'" 1
ATOM 137 N N1 . DC A 1 7 ? 14.497 -17.917 -18.062 1.00 91.59 ? 7 DC A N1 1
ATOM 138 C C2 . DC A 1 7 ? 13.274 -17.286 -17.813 1.00 85.54 ? 7 DC A C2 1
ATOM 139 O O2 . DC A 1 7 ? 12.554 -16.975 -18.775 1.00 87.89 ? 7 DC A O2 1
ATOM 140 N N3 . DC A 1 7 ? 12.903 -17.040 -16.534 1.00 75.52 ? 7 DC A N3 1
ATOM 141 C C4 . DC A 1 7 ? 13.711 -17.388 -15.528 1.00 79.58 ? 7 DC A C4 1
ATOM 142 N N4 . DC A 1 7 ? 13.306 -17.127 -14.282 1.00 75.68 ? 7 DC A N4 1
ATOM 143 C C5 . DC A 1 7 ? 14.964 -18.031 -15.754 1.00 83.49 ? 7 DC A C5 1
ATOM 144 C C6 . DC A 1 7 ? 15.315 -18.271 -17.025 1.00 91.15 ? 7 DC A C6 1
ATOM 145 P P . DT A 1 8 ? 16.809 -16.574 -22.878 1.00 135.48 ? 8 DT A P 1
ATOM 146 O OP1 . DT A 1 8 ? 17.694 -16.992 -23.995 1.00 148.91 ? 8 DT A OP1 1
ATOM 147 O OP2 . DT A 1 8 ? 17.381 -15.778 -21.764 1.00 121.91 ? 8 DT A OP2 1
ATOM 148 O "O5'" . DT A 1 8 ? 15.569 -15.809 -23.528 1.00 131.71 ? 8 DT A "O5'" 1
ATOM 149 C "C5'" . DT A 1 8 ? 14.200 -16.129 -23.190 1.00 129.12 ? 8 DT A "C5'" 1
ATOM 150 C "C4'" . DT A 1 8 ? 13.424 -14.853 -22.969 1.00 118.07 ? 8 DT A "C4'" 1
ATOM 151 O "O4'" . DT A 1 8 ? 13.129 -14.676 -21.561 1.00 112.72 ? 8 DT A "O4'" 1
ATOM 152 C "C3'" . DT A 1 8 ? 14.179 -13.595 -23.381 1.00 115.07 ? 8 DT A "C3'" 1
ATOM 153 O "O3'" . DT A 1 8 ? 13.223 -12.668 -23.881 1.00 125.03 ? 8 DT A "O3'" 1
ATOM 154 C "C2'" . DT A 1 8 ? 14.800 -13.129 -22.079 1.00 105.71 ? 8 DT A "C2'" 1
ATOM 155 C "C1'" . DT A 1 8 ? 13.679 -13.442 -21.107 1.00 99.74 ? 8 DT A "C1'" 1
ATOM 156 N N1 . DT A 1 8 ? 14.042 -13.595 -19.670 1.00 89.02 ? 8 DT A N1 1
ATOM 157 C C2 . DT A 1 8 ? 13.099 -13.226 -18.734 1.00 83.80 ? 8 DT A C2 1
ATOM 158 O O2 . DT A 1 8 ? 12.003 -12.773 -19.030 1.00 84.79 ? 8 DT A O2 1
ATOM 159 N N3 . DT A 1 8 ? 13.487 -13.412 -17.428 1.00 74.74 ? 8 DT A N3 1
ATOM 160 C C4 . DT A 1 8 ? 14.691 -13.922 -16.978 1.00 76.26 ? 8 DT A C4 1
ATOM 161 O O4 . DT A 1 8 ? 14.896 -14.041 -15.770 1.00 80.46 ? 8 DT A O4 1
ATOM 162 C C5 . DT A 1 8 ? 15.628 -14.292 -18.011 1.00 80.77 ? 8 DT A C5 1
ATOM 163 C C7 . DT A 1 8 ? 16.951 -14.867 -17.614 1.00 84.03 ? 8 DT A C7 1
ATOM 164 C C6 . DT A 1 8 ? 15.264 -14.110 -19.289 1.00 85.61 ? 8 DT A C6 1
ATOM 165 P P . DA A 1 9 ? 13.685 -11.481 -24.835 1.00 131.35 ? 9 DA A P 1
ATOM 166 O OP1 . DA A 1 9 ? 13.294 -11.821 -26.235 1.00 133.04 ? 9 DA A OP1 1
ATOM 167 O OP2 . DA A 1 9 ? 15.104 -11.157 -24.516 1.00 128.52 ? 9 DA A OP2 1
ATOM 168 O "O5'" . DA A 1 9 ? 12.755 -10.285 -24.354 1.00 119.99 ? 9 DA A "O5'" 1
ATOM 169 C "C5'" . DA A 1 9 ? 11.341 -10.468 -24.185 1.00 115.59 ? 9 DA A "C5'" 1
ATOM 170 C "C4'" . DA A 1 9 ? 10.847 -9.495 -23.145 1.00 107.49 ? 9 DA A "C4'" 1
ATOM 171 O "O4'" . DA A 1 9 ? 11.385 -9.865 -21.857 1.00 100.83 ? 9 DA A "O4'" 1
ATOM 172 C "C3'" . DA A 1 9 ? 11.281 -8.054 -23.403 1.00 106.34 ? 9 DA A "C3'" 1
ATOM 173 O "O3'" . DA A 1 9 ? 10.122 -7.223 -23.468 1.00 107.47 ? 9 DA A "O3'" 1
ATOM 174 C "C2'" . DA A 1 9 ? 12.270 -7.743 -22.287 1.00 103.37 ? 9 DA A "C2'" 1
ATOM 175 C "C1'" . DA A 1 9 ? 11.944 -8.745 -21.196 1.00 94.77 ? 9 DA A "C1'" 1
ATOM 176 N N9 . DA A 1 9 ? 13.072 -9.234 -20.402 1.00 85.84 ? 9 DA A N9 1
ATOM 177 C C8 . DA A 1 9 ? 14.294 -9.690 -20.836 1.00 82.90 ? 9 DA A C8 1
ATOM 178 N N7 . DA A 1 9 ? 15.067 -10.130 -19.872 1.00 79.48 ? 9 DA A N7 1
ATOM 179 C C5 . DA A 1 9 ? 14.287 -9.989 -18.730 1.00 74.75 ? 9 DA A C5 1
ATOM 180 C C6 . DA A 1 9 ? 14.532 -10.274 -17.373 1.00 72.23 ? 9 DA A C6 1
ATOM 181 N N6 . DA A 1 9 ? 15.679 -10.784 -16.919 1.00 74.30 ? 9 DA A N6 1
ATOM 182 N N1 . DA A 1 9 ? 13.555 -9.989 -16.485 1.00 68.80 ? 9 DA A N1 1
ATOM 183 C C2 . DA A 1 9 ? 12.409 -9.462 -16.940 1.00 70.03 ? 9 DA A C2 1
ATOM 184 N N3 . DA A 1 9 ? 12.058 -9.158 -18.189 1.00 72.78 ? 9 DA A N3 1
ATOM 185 C C4 . DA A 1 9 ? 13.053 -9.447 -19.044 1.00 76.61 ? 9 DA A C4 1
ATOM 186 P P . DG A 1 10 ? 10.261 -5.719 -23.963 1.00 120.54 ? 10 DG A P 1
ATOM 187 O OP1 . DG A 1 10 ? 9.045 -5.385 -24.757 1.00 127.33 ? 10 DG A OP1 1
ATOM 188 O OP2 . DG A 1 10 ? 11.606 -5.561 -24.596 1.00 115.91 ? 10 DG A OP2 1
ATOM 189 O "O5'" . DG A 1 10 ? 10.233 -4.916 -22.584 1.00 107.97 ? 10 DG A "O5'" 1
ATOM 190 C "C5'" . DG A 1 10 ? 9.529 -5.461 -21.451 1.00 100.58 ? 10 DG A "C5'" 1
ATOM 191 C "C4'" . DG A 1 10 ? 9.906 -4.747 -20.174 1.00 96.21 ? 10 DG A "C4'" 1
ATOM 192 O "O4'" . DG A 1 10 ? 10.980 -5.459 -19.507 1.00 87.77 ? 10 DG A "O4'" 1
ATOM 193 C "C3'" . DG A 1 10 ? 10.410 -3.315 -20.357 1.00 97.43 ? 10 DG A "C3'" 1
ATOM 194 O "O3'" . DG A 1 10 ? 9.970 -2.522 -19.242 1.00 100.67 ? 10 DG A "O3'" 1
ATOM 195 C "C2'" . DG A 1 10 ? 11.912 -3.504 -20.383 1.00 92.17 ? 10 DG A "C2'" 1
ATOM 196 C "C1'" . DG A 1 10 ? 12.063 -4.562 -19.313 1.00 82.88 ? 10 DG A "C1'" 1
ATOM 197 N N9 . DG A 1 10 ? 13.300 -5.331 -19.330 1.00 75.78 ? 10 DG A N9 1
ATOM 198 C C8 . DG A 1 10 ? 14.110 -5.645 -20.398 1.00 76.80 ? 10 DG A C8 1
ATOM 199 N N7 . DG A 1 10 ? 15.147 -6.363 -20.058 1.00 78.29 ? 10 DG A N7 1
ATOM 200 C C5 . DG A 1 10 ? 15.024 -6.512 -18.681 1.00 73.35 ? 10 DG A C5 1
ATOM 201 C C6 . DG A 1 10 ? 15.865 -7.178 -17.741 1.00 74.32 ? 10 DG A C6 1
ATOM 202 O O6 . DG A 1 10 ? 16.933 -7.774 -17.942 1.00 79.47 ? 10 DG A O6 1
ATOM 203 N N1 . DG A 1 10 ? 15.353 -7.092 -16.450 1.00 68.50 ? 10 DG A N1 1
ATOM 204 C C2 . DG A 1 10 ? 14.196 -6.436 -16.100 1.00 69.30 ? 10 DG A C2 1
ATOM 205 N N2 . DG A 1 10 ? 13.868 -6.461 -14.799 1.00 68.50 ? 10 DG A N2 1
ATOM 206 N N3 . DG A 1 10 ? 13.419 -5.798 -16.959 1.00 69.66 ? 10 DG A N3 1
ATOM 207 C C4 . DG A 1 10 ? 13.890 -5.877 -18.221 1.00 71.51 ? 10 DG A C4 1
ATOM 208 P P . DG A 1 11 ? 10.243 -0.923 -19.184 1.00 110.14 ? 11 DG A P 1
ATOM 209 O OP1 . DG A 1 11 ? 9.104 -0.276 -18.485 1.00 118.64 ? 11 DG A OP1 1
ATOM 210 O OP2 . DG A 1 11 ? 10.657 -0.449 -20.534 1.00 118.45 ? 11 DG A OP2 1
ATOM 211 O "O5'" . DG A 1 11 ? 11.463 -0.812 -18.172 1.00 101.22 ? 11 DG A "O5'" 1
ATOM 212 C "C5'" . DG A 1 11 ? 11.378 -1.407 -16.867 1.00 92.62 ? 11 DG A "C5'" 1
ATOM 213 C "C4'" . DG A 1 11 ? 12.715 -1.280 -16.180 1.00 85.36 ? 11 DG A "C4'" 1
ATOM 214 O "O4'" . DG A 1 11 ? 13.707 -2.017 -16.933 1.00 79.01 ? 11 DG A "O4'" 1
ATOM 215 C "C3'" . DG A 1 11 ? 13.226 0.157 -16.121 1.00 85.98 ? 11 DG A "C3'" 1
ATOM 216 O "O3'" . DG A 1 11 ? 13.980 0.368 -14.929 1.00 83.88 ? 11 DG A "O3'" 1
ATOM 217 C "C2'" . DG A 1 11 ? 14.107 0.257 -17.349 1.00 84.83 ? 11 DG A "C2'" 1
ATOM 218 C "C1'" . DG A 1 11 ? 14.699 -1.131 -17.415 1.00 78.14 ? 11 DG A "C1'" 1
ATOM 219 N N9 . DG A 1 11 ? 15.083 -1.583 -18.741 1.00 78.44 ? 11 DG A N9 1
ATOM 220 C C8 . DG A 1 11 ? 14.641 -1.135 -19.961 1.00 79.54 ? 11 DG A C8 1
ATOM 221 N N7 . DG A 1 11 ? 15.183 -1.769 -20.965 1.00 85.57 ? 11 DG A N7 1
ATOM 222 C C5 . DG A 1 11 ? 16.039 -2.685 -20.370 1.00 83.68 ? 11 DG A C5 1
ATOM 223 C C6 . DG A 1 11 ? 16.904 -3.652 -20.950 1.00 83.36 ? 11 DG A C6 1
ATOM 224 O O6 . DG A 1 11 ? 17.103 -3.889 -22.148 1.00 87.46 ? 11 DG A O6 1
ATOM 225 N N1 . DG A 1 11 ? 17.595 -4.367 -19.977 1.00 81.74 ? 11 DG A N1 1
ATOM 226 C C2 . DG A 1 11 ? 17.475 -4.177 -18.620 1.00 77.11 ? 11 DG A C2 1
ATOM 227 N N2 . DG A 1 11 ? 18.227 -4.963 -17.838 1.00 74.91 ? 11 DG A N2 1
ATOM 228 N N3 . DG A 1 11 ? 16.662 -3.293 -18.069 1.00 76.45 ? 11 DG A N3 1
ATOM 229 C C4 . DG A 1 11 ? 15.984 -2.584 -18.996 1.00 79.23 ? 11 DG A C4 1
ATOM 230 P P . DA A 1 12 ? 13.844 1.719 -14.134 1.00 89.76 ? 12 DA A P 1
ATOM 231 O OP1 . DA A 1 12 ? 12.403 2.031 -14.007 1.00 95.19 ? 12 DA A OP1 1
ATOM 232 O OP2 . DA A 1 12 ? 14.757 2.734 -14.752 1.00 91.62 ? 12 DA A OP2 1
ATOM 233 O "O5'" . DA A 1 12 ? 14.382 1.290 -12.696 1.00 89.31 ? 12 DA A "O5'" 1
ATOM 234 C "C5'" . DA A 1 12 ? 13.707 0.284 -11.919 1.00 83.43 ? 12 DA A "C5'" 1
ATOM 235 C "C4'" . DA A 1 12 ? 14.709 -0.524 -11.129 1.00 81.61 ? 12 DA A "C4'" 1
ATOM 236 O "O4'" . DA A 1 12 ? 15.580 -1.238 -12.039 1.00 79.10 ? 12 DA A "O4'" 1
ATOM 237 C "C3'" . DA A 1 12 ? 15.628 0.303 -10.223 1.00 90.80 ? 12 DA A "C3'" 1
ATOM 238 O "O3'" . DA A 1 12 ? 15.771 -0.333 -8.940 1.00 108.57 ? 12 DA A "O3'" 1
ATOM 239 C "C2'" . DA A 1 12 ? 16.947 0.319 -10.977 1.00 87.02 ? 12 DA A "C2'" 1
ATOM 240 C "C1'" . DA A 1 12 ? 16.927 -1.037 -11.640 1.00 78.69 ? 12 DA A "C1'" 1
ATOM 241 N N9 . DA A 1 12 ? 17.778 -1.194 -12.817 1.00 74.52 ? 12 DA A N9 1
ATOM 242 C C8 . DA A 1 12 ? 17.454 -1.032 -14.142 1.00 72.19 ? 12 DA A C8 1
ATOM 243 N N7 . DA A 1 12 ? 18.448 -1.280 -14.963 1.00 74.38 ? 12 DA A N7 1
ATOM 244 C C5 . DA A 1 12 ? 19.492 -1.644 -14.123 1.00 74.20 ? 12 DA A C5 1
ATOM 245 C C6 . DA A 1 12 ? 20.817 -2.044 -14.377 1.00 77.10 ? 12 DA A C6 1
ATOM 246 N N6 . DA A 1 12 ? 21.345 -2.130 -15.598 1.00 79.55 ? 12 DA A N6 1
ATOM 247 N N1 . DA A 1 12 ? 21.605 -2.318 -13.314 1.00 81.78 ? 12 DA A N1 1
ATOM 248 C C2 . DA A 1 12 ? 21.079 -2.223 -12.084 1.00 80.76 ? 12 DA A C2 1
ATOM 249 N N3 . DA A 1 12 ? 19.846 -1.869 -11.719 1.00 77.05 ? 12 DA A N3 1
ATOM 250 C C4 . DA A 1 12 ? 19.093 -1.594 -12.799 1.00 75.84 ? 12 DA A C4 1
ATOM 251 P P . DG A 1 13 ? 15.703 0.506 -7.541 1.00 118.09 ? 13 DG A P 1
ATOM 252 O OP1 . DG A 1 13 ? 16.880 1.430 -7.473 1.00 114.94 ? 13 DG A OP1 1
ATOM 253 O OP2 . DG A 1 13 ? 15.463 -0.486 -6.453 1.00 106.33 ? 13 DG A OP2 1
ATOM 254 O "O5'" . DG A 1 13 ? 14.409 1.423 -7.706 1.00 117.82 ? 13 DG A "O5'" 1
HETATM 255 MG MG . MG B 2 . ? 8.901 -27.018 0.921 1.00 91.79 ? 101 MG A MG 1
HETATM 256 O O . HOH C 3 . ? 13.937 -3.281 -12.676 1.00 73.67 ? 201 HOH A O 1
HETATM 257 O O . HOH C 3 . ? 10.311 -26.632 -0.295 1.00 92.38 ? 202 HOH A O 1
HETATM 258 O O . HOH C 3 . ? 8.034 -26.376 2.957 1.00 98.52 ? 203 HOH A O 1
#
loop_
_atom_site_anisotrop.id
_atom_site_anisotrop.type_symbol
_atom_site_anisotrop.pdbx_label_atom_id
_atom_site_anisotrop.pdbx_label_alt_id
_atom_site_anisotrop.pdbx_label_comp_id
_atom_site_anisotrop.pdbx_label_asym_id
_atom_site_anisotrop.pdbx_label_seq_id
_atom_site_anisotrop.pdbx_PDB_ins_code
_atom_site_anisotrop.U[1][1]
_atom_site_anisotrop.U[2][2]
_atom_site_anisotrop.U[3][3]
_atom_site_anisotrop.U[1][2]
_atom_site_anisotrop.U[1][3]
_atom_site_anisotrop.U[2][3]
_atom_site_anisotrop.pdbx_auth_seq_id
_atom_site_anisotrop.pdbx_auth_comp_id
_atom_site_anisotrop.pdbx_auth_asym_id
_atom_site_anisotrop.pdbx_auth_atom_id
1 O "O5'" . DG A 1 ? 1.3668 1.4723 1.1900 -0.1135 0.0994 0.0597 1 DG A "O5'"
2 C "C5'" . DG A 1 ? 1.2862 1.4175 1.1462 -0.1482 0.1149 0.0556 1 DG A "C5'"
3 C "C4'" . DG A 1 ? 1.1835 1.3399 1.0737 -0.1523 0.0870 0.0543 1 DG A "C4'"
4 O "O4'" . DG A 1 ? 1.0694 1.3137 1.0432 -0.1500 0.0651 0.0527 1 DG A "O4'"
5 C "C3'" . DG A 1 ? 1.1929 1.2952 1.0382 -0.1249 0.0703 0.0611 1 DG A "C3'"
6 O "O3'" . DG A 1 ? 1.2567 1.3228 1.0793 -0.1506 0.0775 0.0578 1 DG A "O3'"
7 C "C2'" . DG A 1 ? 1.0606 1.2246 0.9615 -0.0998 0.0378 0.0589 1 DG A "C2'"
8 C "C1'" . DG A 1 ? 0.9827 1.2203 0.9547 -0.1244 0.0356 0.0520 1 DG A "C1'"
9 N N9 . DG A 1 ? 0.8656 1.1559 0.8891 -0.1007 0.0230 0.0512 1 DG A N9
10 C C8 . DG A 1 ? 0.8234 1.1618 0.8966 -0.0947 0.0004 0.0518 1 DG A C8
11 N N7 . DG A 1 ? 0.7892 1.1457 0.8856 -0.0703 0.0026 0.0513 1 DG A N7
12 C C5 . DG A 1 ? 0.7896 1.1057 0.8441 -0.0648 0.0279 0.0479 1 DG A C5
13 C C6 . DG A 1 ? 0.8145 1.1052 0.8475 -0.0493 0.0493 0.0426 1 DG A C6
14 O O6 . DG A 1 ? 0.7871 1.0823 0.8364 -0.0329 0.0539 0.0405 1 DG A O6
15 N N1 . DG A 1 ? 0.8802 1.1185 0.8501 -0.0578 0.0727 0.0392 1 DG A N1
16 C C2 . DG A 1 ? 0.9676 1.1832 0.9048 -0.0732 0.0750 0.0436 1 DG A C2
17 N N2 . DG A 1 ? 1.1512 1.3096 1.0184 -0.0800 0.0989 0.0419 1 DG A N2
18 N N3 . DG A 1 ? 0.9391 1.1698 0.8945 -0.0846 0.0603 0.0488 1 DG A N3
19 C C4 . DG A 1 ? 0.8625 1.1428 0.8746 -0.0821 0.0374 0.0492 1 DG A C4
20 P P . DG A 2 ? 1.3315 1.3330 1.1122 -0.1192 0.0774 0.0681 2 DG A P
21 O OP1 . DG A 2 ? 1.4009 1.3313 1.1276 -0.1612 0.1039 0.0589 2 DG A OP1
22 O OP2 . DG A 2 ? 1.3824 1.3451 1.1244 -0.0733 0.0830 0.0913 2 DG A OP2
23 O "O5'" . DG A 2 ? 1.1921 1.2699 1.0420 -0.0979 0.0395 0.0651 2 DG A "O5'"
24 C "C5'" . DG A 2 ? 0.9948 1.1141 0.8822 -0.1271 0.0239 0.0522 2 DG A "C5'"
25 C "C4'" . DG A 2 ? 0.9079 1.0719 0.8398 -0.0965 -0.0042 0.0531 2 DG A "C4'"
26 O "O4'" . DG A 2 ? 0.8320 1.0572 0.8090 -0.0794 -0.0212 0.0528 2 DG A "O4'"
27 C "C3'" . DG A 2 ? 0.9263 1.0518 0.8357 -0.0559 0.0008 0.0674 2 DG A "C3'"
28 O "O3'" . DG A 2 ? 0.9194 1.0599 0.8519 -0.0519 -0.0110 0.0627 2 DG A "O3'"
29 C "C2'" . DG A 2 ? 0.8653 1.0360 0.7957 -0.0285 -0.0182 0.0775 2 DG A "C2'"
30 C "C1'" . DG A 2 ? 0.8017 1.0288 0.7753 -0.0465 -0.0344 0.0606 2 DG A "C1'"
31 N N9 . DG A 2 ? 0.7941 1.0370 0.7623 -0.0412 -0.0368 0.0604 2 DG A N9
32 C C8 . DG A 2 ? 0.8374 1.0492 0.7591 -0.0373 -0.0264 0.0702 2 DG A C8
33 N N7 . DG A 2 ? 0.8770 1.0966 0.7854 -0.0417 -0.0272 0.0642 2 DG A N7
34 C C5 . DG A 2 ? 0.7559 1.0096 0.7074 -0.0434 -0.0339 0.0509 2 DG A C5
35 C C6 . DG A 2 ? 0.8016 1.0541 0.7463 -0.0465 -0.0259 0.0395 2 DG A C6
36 O O6 . DG A 2 ? 0.9189 1.1367 0.8106 -0.0552 -0.0109 0.0353 2 DG A O6
37 N N1 . DG A 2 ? 0.7598 1.0394 0.7509 -0.0404 -0.0306 0.0332 2 DG A N1
38 C C2 . DG A 2 ? 0.6967 1.0064 0.7321 -0.0374 -0.0472 0.0366 2 DG A C2
39 N N2 . DG A 2 ? 0.6709 1.0001 0.7390 -0.0312 -0.0509 0.0334 2 DG A N2
40 N N3 . DG A 2 ? 0.6432 0.9483 0.6765 -0.0414 -0.0536 0.0433 2 DG A N3
41 C C4 . DG A 2 ? 0.7153 0.9898 0.7076 -0.0419 -0.0436 0.0503 2 DG A C4
42 P P . DA A 3 ? 0.9762 1.0406 0.8664 -0.0387 0.0193 0.0705 3 DA A P
43 O OP1 . DA A 3 ? 1.0433 1.0098 0.8569 -0.0551 0.0608 0.0726 3 DA A OP1
44 O OP2 . DA A 3 ? 1.0871 1.1860 1.0134 0.0116 0.0134 0.0930 3 DA A OP2
45 O "O5'" . DA A 3 ? 1.0023 1.0723 0.8956 -0.0751 0.0075 0.0508 3 DA A "O5'"
46 C "C5'" . DA A 3 ? 0.9753 1.1119 0.9040 -0.1095 -0.0240 0.0391 3 DA A "C5'"
47 C "C4'" . DA A 3 ? 0.9524 1.1045 0.8901 -0.1253 -0.0419 0.0316 3 DA A "C4'"
48 O "O4'" . DA A 3 ? 0.8573 1.0828 0.8587 -0.0988 -0.0692 0.0339 3 DA A "O4'"
49 C "C3'" . DA A 3 ? 1.0348 1.1160 0.9314 -0.1127 -0.0165 0.0305 3 DA A "C3'"
50 O "O3'" . DA A 3 ? 1.2124 1.2853 1.0877 -0.1474 -0.0292 0.0202 3 DA A "O3'"
51 C "C2'" . DA A 3 ? 0.9357 1.0696 0.8916 -0.0617 -0.0266 0.0414 3 DA A "C2'"
52 C "C1'" . DA A 3 ? 0.8231 1.0373 0.8302 -0.0688 -0.0644 0.0359 3 DA A "C1'"
53 N N9 . DA A 3 ? 0.7068 0.9702 0.7520 -0.0412 -0.0770 0.0415 3 DA A N9
54 C C8 . DA A 3 ? 0.7377 1.0071 0.7797 -0.0284 -0.0730 0.0503 3 DA A C8
55 N N7 . DA A 3 ? 0.7107 1.0192 0.7709 -0.0185 -0.0883 0.0514 3 DA A N7
56 C C5 . DA A 3 ? 0.7202 1.0466 0.7997 -0.0233 -0.0998 0.0418 3 DA A C5
57 C C6 . DA A 3 ? 0.7624 1.1128 0.8500 -0.0256 -0.1118 0.0352 3 DA A C6
58 N N6 . DA A 3 ? 0.8725 1.2354 0.9446 -0.0293 -0.1175 0.0362 3 DA A N6
59 N N1 . DA A 3 ? 0.6993 1.0474 0.7951 -0.0310 -0.1154 0.0268 3 DA A N1
60 C C2 . DA A 3 ? 0.7247 1.0541 0.8201 -0.0351 -0.1119 0.0264 3 DA A C2
61 N N3 . DA A 3 ? 0.7497 1.0542 0.8299 -0.0414 -0.1024 0.0303 3 DA A N3
62 C C4 . DA A 3 ? 0.7178 1.0201 0.7918 -0.0341 -0.0945 0.0373 3 DA A C4
63 P P . DT A 4 ? 1.2483 1.2380 1.0254 -0.2172 -0.0142 0.0080 4 DT A P
64 O OP1 . DT A 4 ? 1.2243 1.2425 0.9992 -0.2459 -0.0455 0.0048 4 DT A OP1
65 O OP2 . DT A 4 ? 1.2461 1.2468 1.0078 -0.2572 -0.0172 0.0080 4 DT A OP2
66 O "O5'" . DT A 4 ? 1.3220 1.1785 1.0203 -0.1990 0.0489 0.0052 4 DT A "O5'"
67 C "C5'" . DT A 4 ? 1.4312 1.1819 1.0512 -0.2083 0.0991 0.0050 4 DT A "C5'"
68 C "C4'" . DT A 4 ? 1.5250 1.1285 1.0524 -0.1977 0.1689 0.0032 4 DT A "C4'"
69 O "O4'" . DT A 4 ? 1.6350 1.1378 1.0392 -0.2835 0.1830 -0.0207 4 DT A "O4'"
70 C "C3'" . DT A 4 ? 1.4962 1.1207 1.0746 -0.1433 0.1795 0.0132 4 DT A "C3'"
71 O "O3'" . DT A 4 ? 1.7008 1.2144 1.2364 -0.0937 0.2584 0.0293 4 DT A "O3'"
72 C "C2'" . DT A 4 ? 1.5061 1.1034 1.0269 -0.2062 0.1623 -0.0092 4 DT A "C2'"
73 C "C1'" . DT A 4 ? 1.5718 1.0514 0.9566 -0.2881 0.1859 -0.0280 4 DT A "C1'"
74 N N1 . DT A 4 ? 1.4958 1.0221 0.8505 -0.3716 0.1283 -0.0418 4 DT A N1
75 C C2 . DT A 4 ? 1.6158 1.0347 0.8491 -0.4327 0.1484 -0.0587 4 DT A C2
76 O O2 . DT A 4 ? 1.6888 0.9593 0.8316 -0.4204 0.2221 -0.0669 4 DT A O2
77 N N3 . DT A 4 ? 1.6124 1.1027 0.8299 -0.5089 0.0823 -0.0611 4 DT A N3
78 C C4 . DT A 4 ? 1.4784 1.1383 0.8012 -0.5193 0.0069 -0.0442 4 DT A C4
79 O O4 . DT A 4 ? 1.5613 1.2844 0.8673 -0.5841 -0.0475 -0.0371 4 DT A O4
80 C C5 . DT A 4 ? 1.3403 1.0901 0.7849 -0.4490 0.0017 -0.0312 4 DT A C5
81 C C7 . DT A 4 ? 1.2679 1.1858 0.8265 -0.4492 -0.0621 -0.0117 4 DT A C7
82 C C6 . DT A 4 ? 1.3600 1.0382 0.8084 -0.3841 0.0579 -0.0323 4 DT A C6
83 P P . DA A 5 ? 1.6429 1.2346 1.2894 -0.0030 0.2721 0.0634 5 DA A P
84 O OP1 . DA A 5 ? 1.6336 1.2515 1.3226 0.0566 0.2860 0.0984 5 DA A OP1
85 O OP2 . DA A 5 ? 1.4959 1.2215 1.2324 -0.0100 0.2064 0.0555 5 DA A OP2
86 O "O5'" . DA A 5 ? 1.7177 1.1688 1.2884 0.0140 0.3601 0.0665 5 DA A "O5'"
87 C "C5'" . DA A 5 ? 1.8861 1.1809 1.3085 -0.0583 0.3974 0.0324 5 DA A "C5'"
88 C "C4'" . DA A 5 ? 1.9811 1.2093 1.3772 -0.0434 0.4513 0.0311 5 DA A "C4'"
89 O "O4'" . DA A 5 ? 1.9391 1.1568 1.2735 -0.1249 0.4088 -0.0042 5 DA A "O4'"
90 C "C3'" . DA A 5 ? 1.8737 1.2377 1.4198 0.0343 0.4445 0.0630 5 DA A "C3'"
91 O "O3'" . DA A 5 ? 2.0924 1.3329 1.5839 0.0629 0.5411 0.0712 5 DA A "O3'"
92 C "C2'" . DA A 5 ? 1.7251 1.2149 1.3274 -0.0110 0.3527 0.0404 5 DA A "C2'"
93 C "C1'" . DA A 5 ? 1.7886 1.1642 1.2474 -0.1039 0.3452 0.0013 5 DA A "C1'"
94 N N9 . DA A 5 ? 1.6120 1.0819 1.0882 -0.1608 0.2541 -0.0148 5 DA A N9
95 C C8 . DA A 5 ? 1.4542 1.0668 1.0355 -0.1440 0.1877 -0.0049 5 DA A C8
96 N N7 . DA A 5 ? 1.3336 0.9981 0.9061 -0.1994 0.1258 -0.0174 5 DA A N7
97 C C5 . DA A 5 ? 1.4139 0.9730 0.8663 -0.2632 0.1423 -0.0354 5 DA A C5
98 C C6 . DA A 5 ? 1.4240 0.9918 0.8152 -0.3412 0.0931 -0.0456 5 DA A C6
99 N N6 . DA A 5 ? 1.3726 1.0706 0.8344 -0.3572 0.0211 -0.0352 5 DA A N6
100 N N1 . DA A 5 ? 1.5663 1.0056 0.8190 -0.4022 0.1227 -0.0621 5 DA A N1
101 C C2 . DA A 5 ? 1.7258 1.0228 0.9059 -0.3796 0.2086 -0.0704 5 DA A C2
102 N N3 . DA A 5 ? 1.6965 0.9769 0.9376 -0.2974 0.2679 -0.0572 5 DA A N3
103 C C4 . DA A 5 ? 1.5661 0.9914 0.9468 -0.2440 0.2243 -0.0384 5 DA A C4
104 P P . DG A 6 ? 2.0290 1.3713 1.6459 0.1282 0.5628 0.1014 6 DG A P
105 O OP1 . DG A 6 ? 2.0694 1.2942 1.6604 0.1993 0.6847 0.1368 6 DG A OP1
106 O OP2 . DG A 6 ? 1.8797 1.4418 1.6590 0.1561 0.4749 0.1234 6 DG A OP2
107 O "O5'" . DG A 6 ? 1.9205 1.2225 1.4704 0.0569 0.5436 0.0592 6 DG A "O5'"
108 C "C5'" . DG A 6 ? 2.0838 1.1942 1.4474 -0.0201 0.5797 0.0198 6 DG A "C5'"
109 C "C4'" . DG A 6 ? 2.0271 1.1548 1.3618 -0.0795 0.5354 -0.0089 6 DG A "C4'"
110 O "O4'" . DG A 6 ? 1.9328 1.1523 1.2745 -0.1397 0.4281 -0.0275 6 DG A "O4'"
111 C "C3'" . DG A 6 ? 1.9070 1.1742 1.3856 -0.0283 0.5233 0.0109 6 DG A "C3'"
112 O "O3'" . DG A 6 ? 2.1223 1.3083 1.5158 -0.0749 0.5416 -0.0140 6 DG A "O3'"
113 C "C2'" . DG A 6 ? 1.7097 1.1571 1.2971 -0.0373 0.4111 0.0112 6 DG A "C2'"
114 C "C1'" . DG A 6 ? 1.7126 1.0893 1.1775 -0.1213 0.3639 -0.0211 6 DG A "C1'"
115 N N9 . DG A 6 ? 1.4952 0.9963 1.0227 -0.1382 0.2718 -0.0216 6 DG A N9
116 C C8 . DG A 6 ? 1.3290 0.9534 0.9726 -0.0924 0.2377 -0.0018 6 DG A C8
117 N N7 . DG A 6 ? 1.2664 0.9703 0.9351 -0.1209 0.1647 -0.0084 6 DG A N7
118 C C5 . DG A 6 ? 1.3303 0.9792 0.9081 -0.1853 0.1430 -0.0276 6 DG A C5
119 C C6 . DG A 6 ? 1.2586 0.9664 0.8302 -0.2315 0.0723 -0.0315 6 DG A C6
120 O O6 . DG A 6 ? 1.1242 0.9369 0.7713 -0.2212 0.0222 -0.0222 6 DG A O6
121 N N1 . DG A 6 ? 1.2519 0.8844 0.7150 -0.2937 0.0666 -0.0429 6 DG A N1
122 C C2 . DG A 6 ? 1.4178 0.9145 0.7752 -0.3142 0.1271 -0.0564 6 DG A C2
123 N N2 . DG A 6 ? 1.5279 0.9620 0.7719 -0.3848 0.1076 -0.0659 6 DG A N2
124 N N3 . DG A 6 ? 1.5049 0.9337 0.8663 -0.2676 0.2041 -0.0559 6 DG A N3
125 C C4 . DG A 6 ? 1.4354 0.9555 0.9170 -0.2021 0.2050 -0.0380 6 DG A C4
126 P P . DC A 7 ? 2.1477 1.4217 1.6452 -0.0381 0.5583 -0.0005 7 DC A P
127 O OP1 . DC A 7 ? 2.3886 1.5406 1.8482 0.0037 0.6831 0.0140 7 DC A OP1
128 O OP2 . DC A 7 ? 1.9495 1.4364 1.6249 0.0035 0.4880 0.0242 7 DC A OP2
129 O "O5'" . DC A 7 ? 2.1734 1.4049 1.5750 -0.1173 0.5099 -0.0358 7 DC A "O5'"
130 C "C5'" . DC A 7 ? 2.2650 1.3211 1.4734 -0.1950 0.5250 -0.0661 7 DC A "C5'"
131 C "C4'" . DC A 7 ? 2.1705 1.2828 1.3499 -0.2584 0.4255 -0.0817 7 DC A "C4'"
132 O "O4'" . DC A 7 ? 1.9561 1.2043 1.2240 -0.2527 0.3391 -0.0720 7 DC A "O4'"
133 C "C3'" . DC A 7 ? 2.0785 1.2748 1.3351 -0.2421 0.4052 -0.0783 7 DC A "C3'"
134 O "O3'" . DC A 7 ? 2.3310 1.4411 1.4566 -0.3102 0.3838 -0.0965 7 DC A "O3'"
135 C "C2'" . DC A 7 ? 1.7808 1.1615 1.1841 -0.2129 0.3189 -0.0637 7 DC A "C2'"
136 C "C1'" . DC A 7 ? 1.6933 1.0697 1.0485 -0.2473 0.2677 -0.0669 7 DC A "C1'"
137 N N1 . DC A 7 ? 1.4925 1.0129 0.9747 -0.2107 0.2121 -0.0517 7 DC A N1
138 C C2 . DC A 7 ? 1.3895 0.9805 0.8800 -0.2394 0.1308 -0.0503 7 DC A C2
139 O O2 . DC A 7 ? 1.4652 1.0102 0.8640 -0.2933 0.1014 -0.0560 7 DC A O2
140 N N3 . DC A 7 ? 1.1884 0.8964 0.7845 -0.2070 0.0891 -0.0382 7 DC A N3
141 C C4 . DC A 7 ? 1.1937 0.9523 0.8777 -0.1548 0.1163 -0.0277 7 DC A C4
142 N N4 . DC A 7 ? 1.0820 0.9432 0.8502 -0.1316 0.0745 -0.0176 7 DC A N4
143 C C5 . DC A 7 ? 1.2584 0.9667 0.9472 -0.1226 0.1903 -0.0218 7 DC A C5
144 C C6 . DC A 7 ? 1.4280 1.0166 1.0189 -0.1485 0.2406 -0.0343 7 DC A C6
145 P P . DT A 8 ? 2.2852 1.4250 1.4374 -0.3081 0.3794 -0.0979 8 DT A P
146 O OP1 . DT A 8 ? 2.5419 1.5271 1.5888 -0.3213 0.4784 -0.1106 8 DT A OP1
147 O OP2 . DT A 8 ? 1.9957 1.3064 1.3299 -0.2491 0.3511 -0.0808 8 DT A OP2
148 O "O5'" . DT A 8 ? 2.2714 1.4036 1.3292 -0.3733 0.2918 -0.1016 8 DT A "O5'"
149 C "C5'" . DT A 8 ? 2.2344 1.4047 1.2667 -0.4072 0.2194 -0.0950 8 DT A "C5'"
150 C "C4'" . DT A 8 ? 2.0343 1.3241 1.1275 -0.4051 0.1286 -0.0765 8 DT A "C4'"
151 O "O4'" . DT A 8 ? 1.8700 1.3015 1.1116 -0.3546 0.0907 -0.0633 8 DT A "O4'"
152 C "C3'" . DT A 8 ? 1.9860 1.2830 1.1030 -0.3855 0.1370 -0.0755 8 DT A "C3'"
153 O "O3'" . DT A 8 ? 2.1192 1.4396 1.1916 -0.4128 0.0659 -0.0572 8 DT A "O3'"
154 C "C2'" . DT A 8 ? 1.7698 1.1924 1.0544 -0.3197 0.1383 -0.0700 8 DT A "C2'"
155 C "C1'" . DT A 8 ? 1.6454 1.1580 0.9864 -0.3113 0.0789 -0.0568 8 DT A "C1'"
156 N N1 . DT A 8 ? 1.4295 1.0462 0.9066 -0.2588 0.0815 -0.0526 8 DT A N1
157 C C2 . DT A 8 ? 1.3090 1.0225 0.8526 -0.2442 0.0227 -0.0391 8 DT A C2
158 O O2 . DT A 8 ? 1.3264 1.0564 0.8388 -0.2648 -0.0284 -0.0259 8 DT A O2
159 N N3 . DT A 8 ? 1.1318 0.9267 0.7812 -0.2030 0.0279 -0.0365 8 DT A N3
160 C C4 . DT A 8 ? 1.1285 0.9359 0.8330 -0.1736 0.0777 -0.0386 8 DT A C4
161 O O4 . DT A 8 ? 1.1241 1.0156 0.9173 -0.1420 0.0689 -0.0299 8 DT A O4
162 C C5 . DT A 8 ? 1.2337 0.9524 0.8828 -0.1824 0.1401 -0.0465 8 DT A C5
163 C C7 . DT A 8 ? 1.2417 0.9868 0.9641 -0.1422 0.2013 -0.0372 8 DT A C7
164 C C6 . DT A 8 ? 1.3663 0.9860 0.9003 -0.2253 0.1425 -0.0565 8 DT A C6
165 P P . DA A 9 ? 2.2377 1.5026 1.2505 -0.4219 0.0725 -0.0550 9 DA A P
166 O OP1 . DA A 9 ? 2.3609 1.4997 1.1941 -0.4934 0.0708 -0.0562 9 DA A OP1
167 O OP2 . DA A 9 ? 2.1763 1.4423 1.2645 -0.3827 0.1395 -0.0723 9 DA A OP2
168 O "O5'" . DA A 9 ? 2.0350 1.4086 1.1156 -0.3952 -0.0045 -0.0230 9 DA A "O5'"
169 C "C5'" . DA A 9 ? 1.9543 1.3997 1.0378 -0.4095 -0.0765 0.0065 9 DA A "C5'"
170 C "C4'" . DA A 9 ? 1.7704 1.3341 0.9795 -0.3510 -0.1139 0.0308 9 DA A "C4'"
171 O "O4'" . DA A 9 ? 1.6288 1.2504 0.9518 -0.3119 -0.0855 0.0104 9 DA A "O4'"
172 C "C3'" . DA A 9 ? 1.7664 1.3031 0.9710 -0.3230 -0.1043 0.0396 9 DA A "C3'"
173 O "O3'" . DA A 9 ? 1.7590 1.3516 0.9725 -0.3031 -0.1610 0.0868 9 DA A "O3'"
174 C "C2'" . DA A 9 ? 1.6833 1.2531 0.9912 -0.2820 -0.0613 0.0138 9 DA A "C2'"
175 C "C1'" . DA A 9 ? 1.5180 1.1703 0.9127 -0.2683 -0.0715 0.0085 9 DA A "C1'"
176 N N9 . DA A 9 ? 1.3755 1.0459 0.8400 -0.2518 -0.0245 -0.0190 9 DA A N9
177 C C8 . DA A 9 ? 1.3637 0.9782 0.8080 -0.2633 0.0335 -0.0412 9 DA A C8
178 N N7 . DA A 9 ? 1.2695 0.9437 0.8068 -0.2376 0.0606 -0.0500 9 DA A N7
179 C C5 . DA A 9 ? 1.1572 0.9178 0.7650 -0.2140 0.0168 -0.0387 9 DA A C5
180 C C6 . DA A 9 ? 1.0635 0.9111 0.7699 -0.1859 0.0147 -0.0386 9 DA A C6
181 N N6 . DA A 9 ? 1.0591 0.9399 0.8242 -0.1728 0.0526 -0.0438 9 DA A N6
182 N N1 . DA A 9 ? 0.9884 0.8932 0.7325 -0.1700 -0.0267 -0.0275 9 DA A N1
183 C C2 . DA A 9 ? 1.0226 0.9130 0.7252 -0.1749 -0.0620 -0.0115 9 DA A C2
184 N N3 . DA A 9 ? 1.1056 0.9340 0.7257 -0.1977 -0.0709 -0.0027 9 DA A N3
185 C C4 . DA A 9 ? 1.1952 0.9530 0.7627 -0.2203 -0.0308 -0.0203 9 DA A C4
186 P P . DG A 10 ? 1.9552 1.4963 1.1284 -0.2766 -0.1557 0.1092 10 DG A P
187 O OP1 . DG A 10 ? 2.0498 1.6177 1.1706 -0.2831 -0.2172 0.1673 10 DG A OP1
188 O OP2 . DG A 10 ? 1.9582 1.3857 1.0600 -0.3019 -0.0961 0.0704 10 DG A OP2
189 O "O5'" . DG A 10 ? 1.7365 1.3401 1.0258 -0.2137 -0.1425 0.1111 10 DG A "O5'"
190 C "C5'" . DG A 10 ? 1.5722 1.2834 0.9658 -0.1895 -0.1653 0.1181 10 DG A "C5'"
191 C "C4'" . DG A 10 ? 1.4849 1.2146 0.9560 -0.1457 -0.1335 0.1032 10 DG A "C4'"
192 O "O4'" . DG A 10 ? 1.3626 1.0989 0.8733 -0.1629 -0.1008 0.0566 10 DG A "O4'"
193 C "C3'" . DG A 10 ? 1.5445 1.1893 0.9683 -0.1265 -0.0988 0.1046 10 DG A "C3'"
194 O "O3'" . DG A 10 ? 1.5596 1.2274 1.0382 -0.0793 -0.0865 0.1169 10 DG A "O3'"
195 C "C2'" . DG A 10 ? 1.5001 1.0951 0.9070 -0.1626 -0.0533 0.0536 10 DG A "C2'"
196 C "C1'" . DG A 10 ? 1.3228 1.0051 0.8213 -0.1627 -0.0572 0.0325 10 DG A "C1'"
197 N N9 . DG A 10 ? 1.2291 0.9088 0.7415 -0.1919 -0.0249 -0.0030 10 DG A N9
198 C C8 . DG A 10 ? 1.2839 0.8987 0.7355 -0.2240 0.0041 -0.0180 10 DG A C8
199 N N7 . DG A 10 ? 1.2772 0.9195 0.7779 -0.2328 0.0379 -0.0411 10 DG A N7
200 C C5 . DG A 10 ? 1.1538 0.8860 0.7473 -0.2094 0.0229 -0.0414 10 DG A C5
201 C C6 . DG A 10 ? 1.1121 0.9194 0.7923 -0.2038 0.0405 -0.0528 10 DG A C6
202 O O6 . DG A 10 ? 1.1649 0.9832 0.8716 -0.2114 0.0780 -0.0613 10 DG A O6
203 N N1 . DG A 10 ? 0.9953 0.8721 0.7354 -0.1837 0.0131 -0.0474 10 DG A N1
204 C C2 . DG A 10 ? 1.0124 0.8835 0.7373 -0.1666 -0.0170 -0.0338 10 DG A C2
205 N N2 . DG A 10 ? 0.9637 0.8947 0.7442 -0.1499 -0.0308 -0.0324 10 DG A N2
206 N N3 . DG A 10 ? 1.0581 0.8703 0.7182 -0.1629 -0.0293 -0.0174 10 DG A N3
207 C C4 . DG A 10 ? 1.1247 0.8722 0.7200 -0.1869 -0.0128 -0.0218 10 DG A C4
208 P P . DG A 11 ? 1.7337 1.2971 1.1542 -0.0528 -0.0415 0.1230 11 DG A P
209 O OP1 . DG A 11 ? 1.8201 1.4077 1.2799 0.0092 -0.0410 0.1657 11 DG A OP1
210 O OP2 . DG A 11 ? 1.9036 1.3743 1.2225 -0.0745 -0.0338 0.1299 11 DG A OP2
211 O "O5'" . DG A 11 ? 1.6203 1.1656 1.0598 -0.0816 0.0012 0.0669 11 DG A "O5'"
212 C "C5'" . DG A 11 ? 1.4564 1.0834 0.9794 -0.0765 -0.0048 0.0507 11 DG A "C5'"
213 C "C4'" . DG A 11 ? 1.3675 0.9828 0.8929 -0.1185 0.0277 0.0040 11 DG A "C4'"
214 O "O4'" . DG A 11 ? 1.2813 0.9124 0.8083 -0.1575 0.0281 -0.0167 11 DG A "O4'"
215 C "C3'" . DG A 11 ? 1.4405 0.9431 0.8834 -0.1320 0.0751 -0.0083 11 DG A "C3'"
216 O "O3'" . DG A 11 ? 1.4048 0.9209 0.8612 -0.1666 0.0962 -0.0419 11 DG A "O3'"
217 C "C2'" . DG A 11 ? 1.4610 0.9126 0.8495 -0.1681 0.0887 -0.0201 11 DG A "C2'"
218 C "C1'" . DG A 11 ? 1.3182 0.8699 0.7811 -0.1911 0.0670 -0.0362 11 DG A "C1'"
219 N N9 . DG A 11 ? 1.3442 0.8665 0.7698 -0.2096 0.0692 -0.0358 11 DG A N9
220 C C8 . DG A 11 ? 1.4154 0.8529 0.7538 -0.2041 0.0675 -0.0142 11 DG A C8
221 N N7 . DG A 11 ? 1.5088 0.9260 0.8166 -0.2324 0.0751 -0.0234 11 DG A N7
222 C C5 . DG A 11 ? 1.4313 0.9272 0.8210 -0.2493 0.0879 -0.0493 11 DG A C5
223 C C6 . DG A 11 ? 1.4204 0.9253 0.8216 -0.2731 0.1132 -0.0651 11 DG A C6
224 O O6 . DG A 11 ? 1.5220 0.9529 0.8484 -0.2927 0.1317 -0.0661 11 DG A O6
225 N N1 . DG A 11 ? 1.3317 0.9366 0.8376 -0.2711 0.1221 -0.0773 11 DG A N1
226 C C2 . DG A 11 ? 1.2223 0.9067 0.8007 -0.2582 0.1025 -0.0778 11 DG A C2
227 N N2 . DG A 11 ? 1.1305 0.9132 0.8027 -0.2585 0.1096 -0.0829 11 DG A N2
228 N N3 . DG A 11 ? 1.2288 0.8921 0.7839 -0.2436 0.0817 -0.0698 11 DG A N3
229 C C4 . DG A 11 ? 1.3253 0.8943 0.7907 -0.2358 0.0788 -0.0547 11 DG A C4
230 P P . DA A 12 ? 1.5421 0.9489 0.9194 -0.1685 0.1427 -0.0494 12 DA A P
231 O OP1 . DA A 12 ? 1.6215 0.9983 0.9972 -0.0963 0.1446 -0.0082 12 DA A OP1
232 O OP2 . DA A 12 ? 1.6348 0.9313 0.9149 -0.2144 0.1850 -0.0695 12 DA A OP2
233 O "O5'" . DA A 12 ? 1.4958 0.9781 0.9196 -0.2075 0.1360 -0.0788 12 DA A "O5'"
234 C "C5'" . DA A 12 ? 1.3586 0.9426 0.8688 -0.1761 0.1010 -0.0671 12 DA A "C5'"
235 C "C4'" . DA A 12 ? 1.2801 0.9701 0.8505 -0.2242 0.0793 -0.0909 12 DA A "C4'"
236 O "O4'" . DA A 12 ? 1.2119 0.9650 0.8285 -0.2426 0.0646 -0.0934 12 DA A "O4'"
237 C "C3'" . DA A 12 ? 1.4291 1.0829 0.9382 -0.2928 0.1051 -0.1214 12 DA A "C3'"
238 O "O3'" . DA A 12 ? 1.6096 1.3511 1.1646 -0.3110 0.0808 -0.1274 12 DA A "O3'"
239 C "C2'" . DA A 12 ? 1.3671 1.0541 0.8853 -0.3452 0.1080 -0.1353 12 DA A "C2'"
240 C "C1'" . DA A 12 ? 1.1924 0.9846 0.8130 -0.3068 0.0744 -0.1163 12 DA A "C1'"
241 N N9 . DA A 12 ? 1.1329 0.9339 0.7646 -0.3244 0.0858 -0.1184 12 DA A N9
242 C C8 . DA A 12 ? 1.1431 0.8682 0.7318 -0.3018 0.0983 -0.1097 12 DA A C8
243 N N7 . DA A 12 ? 1.1587 0.9044 0.7631 -0.3286 0.1143 -0.1162 12 DA A N7
244 C C5 . DA A 12 ? 1.0934 0.9533 0.7726 -0.3660 0.1105 -0.1242 12 DA A C5
245 C C6 . DA A 12 ? 1.0781 1.0276 0.8237 -0.3996 0.1259 -0.1252 12 DA A C6
246 N N6 . DA A 12 ? 1.1236 1.0402 0.8587 -0.4035 0.1573 -0.1258 12 DA A N6
247 N N1 . DA A 12 ? 1.0685 1.1472 0.8915 -0.4306 0.1102 -0.1214 12 DA A N1
248 C C2 . DA A 12 ? 1.0514 1.1496 0.8677 -0.4327 0.0811 -0.1224 12 DA A C2
249 N N3 . DA A 12 ? 1.0575 1.0630 0.8072 -0.4033 0.0723 -0.1270 12 DA A N3
250 C C4 . DA A 12 ? 1.0982 0.9935 0.7897 -0.3670 0.0882 -0.1252 12 DA A C4
251 P P . DG A 13 ? 1.7852 1.4528 1.2488 -0.3546 0.1067 -0.1482 13 DG A P
252 O OP1 . DG A 13 ? 1.7877 1.4100 1.1697 -0.4446 0.1296 -0.1765 13 DG A OP1
253 O OP2 . DG A 13 ? 1.5809 1.3494 1.1096 -0.3452 0.0714 -0.1412 13 DG A OP2
254 O "O5'" . DG A 13 ? 1.8592 1.3741 1.2434 -0.2962 0.1549 -0.1366 13 DG A "O5'"
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 DG 1 1 1 DG DG A . n
A 1 2 DG 2 2 2 DG DG A . n
A 1 3 DA 3 3 3 DA DA A . n
A 1 4 DT 4 4 4 DT DT A . n
A 1 5 DA 5 5 5 DA DA A . n
A 1 6 DG 6 6 6 DG DG A . n
A 1 7 DC 7 7 7 DC DC A . n
A 1 8 DT 8 8 8 DT DT A . n
A 1 9 DA 9 9 9 DA DA A . n
A 1 10 DG 10 10 10 DG DG A . n
A 1 11 DG 11 11 11 DG DG A . n
A 1 12 DA 12 12 12 DA DA A . n
A 1 13 DG 13 13 13 DG DG A . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MG 1 101 1 MG MG A .
C 3 HOH 1 201 3 HOH HOH A .
C 3 HOH 2 202 4 HOH HOH A .
C 3 HOH 3 203 5 HOH HOH A .
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1,2
_pdbx_struct_assembly_gen.asym_id_list A,B,C
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 4_545 -x,-y-1,z -1.0000000000 0.0000000000 0.0000000000 20.3900000000 0.0000000000 -1.0000000000
0.0000000000 -35.3165159663 0.0000000000 0.0000000000 1.0000000000 0.0000000000
#
_pdbx_struct_conn_angle.id 1
_pdbx_struct_conn_angle.ptnr1_label_atom_id O
_pdbx_struct_conn_angle.ptnr1_label_alt_id ?
_pdbx_struct_conn_angle.ptnr1_label_asym_id C
_pdbx_struct_conn_angle.ptnr1_label_comp_id HOH
_pdbx_struct_conn_angle.ptnr1_label_seq_id .
_pdbx_struct_conn_angle.ptnr1_auth_atom_id ?
_pdbx_struct_conn_angle.ptnr1_auth_asym_id A
_pdbx_struct_conn_angle.ptnr1_auth_comp_id HOH
_pdbx_struct_conn_angle.ptnr1_auth_seq_id 202
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code ?
_pdbx_struct_conn_angle.ptnr1_symmetry 1_555
_pdbx_struct_conn_angle.ptnr2_label_atom_id MG
_pdbx_struct_conn_angle.ptnr2_label_alt_id ?
_pdbx_struct_conn_angle.ptnr2_label_asym_id B
_pdbx_struct_conn_angle.ptnr2_label_comp_id MG
_pdbx_struct_conn_angle.ptnr2_label_seq_id .
_pdbx_struct_conn_angle.ptnr2_auth_atom_id ?
_pdbx_struct_conn_angle.ptnr2_auth_asym_id A
_pdbx_struct_conn_angle.ptnr2_auth_comp_id MG
_pdbx_struct_conn_angle.ptnr2_auth_seq_id 101
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code ?
_pdbx_struct_conn_angle.ptnr2_symmetry 1_555
_pdbx_struct_conn_angle.ptnr3_label_atom_id O
_pdbx_struct_conn_angle.ptnr3_label_alt_id ?
_pdbx_struct_conn_angle.ptnr3_label_asym_id C
_pdbx_struct_conn_angle.ptnr3_label_comp_id HOH
_pdbx_struct_conn_angle.ptnr3_label_seq_id .
_pdbx_struct_conn_angle.ptnr3_auth_atom_id ?
_pdbx_struct_conn_angle.ptnr3_auth_asym_id A
_pdbx_struct_conn_angle.ptnr3_auth_comp_id HOH
_pdbx_struct_conn_angle.ptnr3_auth_seq_id 203
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code ?
_pdbx_struct_conn_angle.ptnr3_symmetry 1_555
_pdbx_struct_conn_angle.value 142.0
_pdbx_struct_conn_angle.value_esd ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2015-06-17
2 'Structure model' 1 1 2015-09-09
3 'Structure model' 1 2 2023-09-20
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Database references'
2 3 'Structure model' 'Data collection'
3 3 'Structure model' 'Database references'
4 3 'Structure model' 'Derived calculations'
5 3 'Structure model' 'Refinement description'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 3 'Structure model' chem_comp_atom
2 3 'Structure model' chem_comp_bond
3 3 'Structure model' database_2
4 3 'Structure model' pdbx_initial_refinement_model
5 3 'Structure model' struct_site
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 3 'Structure model' '_database_2.pdbx_DOI'
2 3 'Structure model' '_database_2.pdbx_database_accession'
3 3 'Structure model' '_struct_site.pdbx_auth_asym_id'
4 3 'Structure model' '_struct_site.pdbx_auth_comp_id'
5 3 'Structure model' '_struct_site.pdbx_auth_seq_id'
#
_pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION'
_pdbx_refine_tls.id 1
_pdbx_refine_tls.details ?
_pdbx_refine_tls.method refined
_pdbx_refine_tls.origin_x 11.1860
_pdbx_refine_tls.origin_y -15.0060
_pdbx_refine_tls.origin_z -11.9610
_pdbx_refine_tls.T[1][1] 0.3077
_pdbx_refine_tls.T[2][2] 0.3939
_pdbx_refine_tls.T[3][3] 0.2190
_pdbx_refine_tls.T[1][2] -0.1166
_pdbx_refine_tls.T[1][3] -0.0605
_pdbx_refine_tls.T[2][3] -0.0037
_pdbx_refine_tls.L[1][1] 3.8315
_pdbx_refine_tls.L[2][2] 9.2769
_pdbx_refine_tls.L[3][3] 13.1607
_pdbx_refine_tls.L[1][2] 3.6700
_pdbx_refine_tls.L[1][3] -5.7970
_pdbx_refine_tls.L[2][3] -4.3539
_pdbx_refine_tls.S[1][1] -0.7058
_pdbx_refine_tls.S[1][2] 0.0150
_pdbx_refine_tls.S[1][3] -0.2437
_pdbx_refine_tls.S[2][1] -1.3670
_pdbx_refine_tls.S[2][2] 0.4355
_pdbx_refine_tls.S[2][3] -0.3695
_pdbx_refine_tls.S[3][1] 0.8033
_pdbx_refine_tls.S[3][2] -0.2252
_pdbx_refine_tls.S[3][3] 0.2703
#
_pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION'
_pdbx_refine_tls_group.id 1
_pdbx_refine_tls_group.refine_tls_id 1
_pdbx_refine_tls_group.beg_auth_asym_id A
_pdbx_refine_tls_group.beg_auth_seq_id 1
_pdbx_refine_tls_group.beg_label_asym_id ?
_pdbx_refine_tls_group.beg_label_seq_id ?
_pdbx_refine_tls_group.end_auth_asym_id A
_pdbx_refine_tls_group.end_auth_seq_id 13
_pdbx_refine_tls_group.end_label_asym_id ?
_pdbx_refine_tls_group.end_label_seq_id ?
_pdbx_refine_tls_group.selection ?
_pdbx_refine_tls_group.selection_details ?
#
_software.name REFMAC
_software.classification refinement
_software.version 5.8.0073
_software.citation_id ?
_software.pdbx_ordinal 1
#
_pdbx_validate_rmsd_angle.id 1
_pdbx_validate_rmsd_angle.PDB_model_num 1
_pdbx_validate_rmsd_angle.auth_atom_id_1 "C5'"
_pdbx_validate_rmsd_angle.auth_asym_id_1 A
_pdbx_validate_rmsd_angle.auth_comp_id_1 DG
_pdbx_validate_rmsd_angle.auth_seq_id_1 1
_pdbx_validate_rmsd_angle.PDB_ins_code_1 ?
_pdbx_validate_rmsd_angle.label_alt_id_1 ?
_pdbx_validate_rmsd_angle.auth_atom_id_2 "C4'"
_pdbx_validate_rmsd_angle.auth_asym_id_2 A
_pdbx_validate_rmsd_angle.auth_comp_id_2 DG
_pdbx_validate_rmsd_angle.auth_seq_id_2 1
_pdbx_validate_rmsd_angle.PDB_ins_code_2 ?
_pdbx_validate_rmsd_angle.label_alt_id_2 ?
_pdbx_validate_rmsd_angle.auth_atom_id_3 "O4'"
_pdbx_validate_rmsd_angle.auth_asym_id_3 A
_pdbx_validate_rmsd_angle.auth_comp_id_3 DG
_pdbx_validate_rmsd_angle.auth_seq_id_3 1
_pdbx_validate_rmsd_angle.PDB_ins_code_3 ?
_pdbx_validate_rmsd_angle.label_alt_id_3 ?
_pdbx_validate_rmsd_angle.angle_value 117.95
_pdbx_validate_rmsd_angle.angle_target_value 109.80
_pdbx_validate_rmsd_angle.angle_deviation 8.15
_pdbx_validate_rmsd_angle.angle_standard_deviation 1.10
_pdbx_validate_rmsd_angle.linker_flag N
#
loop_
_pdbx_unobs_or_zero_occ_atoms.id
_pdbx_unobs_or_zero_occ_atoms.PDB_model_num
_pdbx_unobs_or_zero_occ_atoms.polymer_flag
_pdbx_unobs_or_zero_occ_atoms.occupancy_flag
_pdbx_unobs_or_zero_occ_atoms.auth_asym_id
_pdbx_unobs_or_zero_occ_atoms.auth_comp_id
_pdbx_unobs_or_zero_occ_atoms.auth_seq_id
_pdbx_unobs_or_zero_occ_atoms.PDB_ins_code
_pdbx_unobs_or_zero_occ_atoms.auth_atom_id
_pdbx_unobs_or_zero_occ_atoms.label_alt_id
_pdbx_unobs_or_zero_occ_atoms.label_asym_id
_pdbx_unobs_or_zero_occ_atoms.label_comp_id
_pdbx_unobs_or_zero_occ_atoms.label_seq_id
_pdbx_unobs_or_zero_occ_atoms.label_atom_id
1 1 Y 1 A DG 13 ? "C5'" ? A DG 13 "C5'"
2 1 Y 1 A DG 13 ? "C4'" ? A DG 13 "C4'"
3 1 Y 1 A DG 13 ? "O4'" ? A DG 13 "O4'"
4 1 Y 1 A DG 13 ? "C3'" ? A DG 13 "C3'"
5 1 Y 1 A DG 13 ? "O3'" ? A DG 13 "O3'"
6 1 Y 1 A DG 13 ? "C2'" ? A DG 13 "C2'"
7 1 Y 1 A DG 13 ? "C1'" ? A DG 13 "C1'"
8 1 Y 1 A DG 13 ? N9 ? A DG 13 N9
9 1 Y 1 A DG 13 ? C8 ? A DG 13 C8
10 1 Y 1 A DG 13 ? N7 ? A DG 13 N7
11 1 Y 1 A DG 13 ? C5 ? A DG 13 C5
12 1 Y 1 A DG 13 ? C6 ? A DG 13 C6
13 1 Y 1 A DG 13 ? O6 ? A DG 13 O6
14 1 Y 1 A DG 13 ? N1 ? A DG 13 N1
15 1 Y 1 A DG 13 ? C2 ? A DG 13 C2
16 1 Y 1 A DG 13 ? N2 ? A DG 13 N2
17 1 Y 1 A DG 13 ? N3 ? A DG 13 N3
18 1 Y 1 A DG 13 ? C4 ? A DG 13 C4
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
DA OP3 O N N 1
DA P P N N 2
DA OP1 O N N 3
DA OP2 O N N 4
DA "O5'" O N N 5
DA "C5'" C N N 6
DA "C4'" C N R 7
DA "O4'" O N N 8
DA "C3'" C N S 9
DA "O3'" O N N 10
DA "C2'" C N N 11
DA "C1'" C N R 12
DA N9 N Y N 13
DA C8 C Y N 14
DA N7 N Y N 15
DA C5 C Y N 16
DA C6 C Y N 17
DA N6 N N N 18
DA N1 N Y N 19
DA C2 C Y N 20
DA N3 N Y N 21
DA C4 C Y N 22
DA HOP3 H N N 23
DA HOP2 H N N 24
DA "H5'" H N N 25
DA "H5''" H N N 26
DA "H4'" H N N 27
DA "H3'" H N N 28
DA "HO3'" H N N 29
DA "H2'" H N N 30
DA "H2''" H N N 31
DA "H1'" H N N 32
DA H8 H N N 33
DA H61 H N N 34
DA H62 H N N 35
DA H2 H N N 36
DC OP3 O N N 37
DC P P N N 38
DC OP1 O N N 39
DC OP2 O N N 40
DC "O5'" O N N 41
DC "C5'" C N N 42
DC "C4'" C N R 43
DC "O4'" O N N 44
DC "C3'" C N S 45
DC "O3'" O N N 46
DC "C2'" C N N 47
DC "C1'" C N R 48
DC N1 N N N 49
DC C2 C N N 50
DC O2 O N N 51
DC N3 N N N 52
DC C4 C N N 53
DC N4 N N N 54
DC C5 C N N 55
DC C6 C N N 56
DC HOP3 H N N 57
DC HOP2 H N N 58
DC "H5'" H N N 59
DC "H5''" H N N 60
DC "H4'" H N N 61
DC "H3'" H N N 62
DC "HO3'" H N N 63
DC "H2'" H N N 64
DC "H2''" H N N 65
DC "H1'" H N N 66
DC H41 H N N 67
DC H42 H N N 68
DC H5 H N N 69
DC H6 H N N 70
DG OP3 O N N 71
DG P P N N 72
DG OP1 O N N 73
DG OP2 O N N 74
DG "O5'" O N N 75
DG "C5'" C N N 76
DG "C4'" C N R 77
DG "O4'" O N N 78
DG "C3'" C N S 79
DG "O3'" O N N 80
DG "C2'" C N N 81
DG "C1'" C N R 82
DG N9 N Y N 83
DG C8 C Y N 84
DG N7 N Y N 85
DG C5 C Y N 86
DG C6 C N N 87
DG O6 O N N 88
DG N1 N N N 89
DG C2 C N N 90
DG N2 N N N 91
DG N3 N N N 92
DG C4 C Y N 93
DG HOP3 H N N 94
DG HOP2 H N N 95
DG "H5'" H N N 96
DG "H5''" H N N 97
DG "H4'" H N N 98
DG "H3'" H N N 99
DG "HO3'" H N N 100
DG "H2'" H N N 101
DG "H2''" H N N 102
DG "H1'" H N N 103
DG H8 H N N 104
DG H1 H N N 105
DG H21 H N N 106
DG H22 H N N 107
DT OP3 O N N 108
DT P P N N 109
DT OP1 O N N 110
DT OP2 O N N 111
DT "O5'" O N N 112
DT "C5'" C N N 113
DT "C4'" C N R 114
DT "O4'" O N N 115
DT "C3'" C N S 116
DT "O3'" O N N 117
DT "C2'" C N N 118
DT "C1'" C N R 119
DT N1 N N N 120
DT C2 C N N 121
DT O2 O N N 122
DT N3 N N N 123
DT C4 C N N 124
DT O4 O N N 125
DT C5 C N N 126
DT C7 C N N 127
DT C6 C N N 128
DT HOP3 H N N 129
DT HOP2 H N N 130
DT "H5'" H N N 131
DT "H5''" H N N 132
DT "H4'" H N N 133
DT "H3'" H N N 134
DT "HO3'" H N N 135
DT "H2'" H N N 136
DT "H2''" H N N 137
DT "H1'" H N N 138
DT H3 H N N 139
DT H71 H N N 140
DT H72 H N N 141
DT H73 H N N 142
DT H6 H N N 143
HOH O O N N 144
HOH H1 H N N 145
HOH H2 H N N 146
MG MG MG N N 147
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DA OP3 P sing N N 1
DA OP3 HOP3 sing N N 2
DA P OP1 doub N N 3
DA P OP2 sing N N 4
DA P "O5'" sing N N 5
DA OP2 HOP2 sing N N 6
DA "O5'" "C5'" sing N N 7
DA "C5'" "C4'" sing N N 8
DA "C5'" "H5'" sing N N 9
DA "C5'" "H5''" sing N N 10
DA "C4'" "O4'" sing N N 11
DA "C4'" "C3'" sing N N 12
DA "C4'" "H4'" sing N N 13
DA "O4'" "C1'" sing N N 14
DA "C3'" "O3'" sing N N 15
DA "C3'" "C2'" sing N N 16
DA "C3'" "H3'" sing N N 17
DA "O3'" "HO3'" sing N N 18
DA "C2'" "C1'" sing N N 19
DA "C2'" "H2'" sing N N 20
DA "C2'" "H2''" sing N N 21
DA "C1'" N9 sing N N 22
DA "C1'" "H1'" sing N N 23
DA N9 C8 sing Y N 24
DA N9 C4 sing Y N 25
DA C8 N7 doub Y N 26
DA C8 H8 sing N N 27
DA N7 C5 sing Y N 28
DA C5 C6 sing Y N 29
DA C5 C4 doub Y N 30
DA C6 N6 sing N N 31
DA C6 N1 doub Y N 32
DA N6 H61 sing N N 33
DA N6 H62 sing N N 34
DA N1 C2 sing Y N 35
DA C2 N3 doub Y N 36
DA C2 H2 sing N N 37
DA N3 C4 sing Y N 38
DC OP3 P sing N N 39
DC OP3 HOP3 sing N N 40
DC P OP1 doub N N 41
DC P OP2 sing N N 42
DC P "O5'" sing N N 43
DC OP2 HOP2 sing N N 44
DC "O5'" "C5'" sing N N 45
DC "C5'" "C4'" sing N N 46
DC "C5'" "H5'" sing N N 47
DC "C5'" "H5''" sing N N 48
DC "C4'" "O4'" sing N N 49
DC "C4'" "C3'" sing N N 50
DC "C4'" "H4'" sing N N 51
DC "O4'" "C1'" sing N N 52
DC "C3'" "O3'" sing N N 53
DC "C3'" "C2'" sing N N 54
DC "C3'" "H3'" sing N N 55
DC "O3'" "HO3'" sing N N 56
DC "C2'" "C1'" sing N N 57
DC "C2'" "H2'" sing N N 58
DC "C2'" "H2''" sing N N 59
DC "C1'" N1 sing N N 60
DC "C1'" "H1'" sing N N 61
DC N1 C2 sing N N 62
DC N1 C6 sing N N 63
DC C2 O2 doub N N 64
DC C2 N3 sing N N 65
DC N3 C4 doub N N 66
DC C4 N4 sing N N 67
DC C4 C5 sing N N 68
DC N4 H41 sing N N 69
DC N4 H42 sing N N 70
DC C5 C6 doub N N 71
DC C5 H5 sing N N 72
DC C6 H6 sing N N 73
DG OP3 P sing N N 74
DG OP3 HOP3 sing N N 75
DG P OP1 doub N N 76
DG P OP2 sing N N 77
DG P "O5'" sing N N 78
DG OP2 HOP2 sing N N 79
DG "O5'" "C5'" sing N N 80
DG "C5'" "C4'" sing N N 81
DG "C5'" "H5'" sing N N 82
DG "C5'" "H5''" sing N N 83
DG "C4'" "O4'" sing N N 84
DG "C4'" "C3'" sing N N 85
DG "C4'" "H4'" sing N N 86
DG "O4'" "C1'" sing N N 87
DG "C3'" "O3'" sing N N 88
DG "C3'" "C2'" sing N N 89
DG "C3'" "H3'" sing N N 90
DG "O3'" "HO3'" sing N N 91
DG "C2'" "C1'" sing N N 92
DG "C2'" "H2'" sing N N 93
DG "C2'" "H2''" sing N N 94
DG "C1'" N9 sing N N 95
DG "C1'" "H1'" sing N N 96
DG N9 C8 sing Y N 97
DG N9 C4 sing Y N 98
DG C8 N7 doub Y N 99
DG C8 H8 sing N N 100
DG N7 C5 sing Y N 101
DG C5 C6 sing N N 102
DG C5 C4 doub Y N 103
DG C6 O6 doub N N 104
DG C6 N1 sing N N 105
DG N1 C2 sing N N 106
DG N1 H1 sing N N 107
DG C2 N2 sing N N 108
DG C2 N3 doub N N 109
DG N2 H21 sing N N 110
DG N2 H22 sing N N 111
DG N3 C4 sing N N 112
DT OP3 P sing N N 113
DT OP3 HOP3 sing N N 114
DT P OP1 doub N N 115
DT P OP2 sing N N 116
DT P "O5'" sing N N 117
DT OP2 HOP2 sing N N 118
DT "O5'" "C5'" sing N N 119
DT "C5'" "C4'" sing N N 120
DT "C5'" "H5'" sing N N 121
DT "C5'" "H5''" sing N N 122
DT "C4'" "O4'" sing N N 123
DT "C4'" "C3'" sing N N 124
DT "C4'" "H4'" sing N N 125
DT "O4'" "C1'" sing N N 126
DT "C3'" "O3'" sing N N 127
DT "C3'" "C2'" sing N N 128
DT "C3'" "H3'" sing N N 129
DT "O3'" "HO3'" sing N N 130
DT "C2'" "C1'" sing N N 131
DT "C2'" "H2'" sing N N 132
DT "C2'" "H2''" sing N N 133
DT "C1'" N1 sing N N 134
DT "C1'" "H1'" sing N N 135
DT N1 C2 sing N N 136
DT N1 C6 sing N N 137
DT C2 O2 doub N N 138
DT C2 N3 sing N N 139
DT N3 C4 sing N N 140
DT N3 H3 sing N N 141
DT C4 O4 doub N N 142
DT C4 C5 sing N N 143
DT C5 C7 sing N N 144
DT C5 C6 doub N N 145
DT C7 H71 sing N N 146
DT C7 H72 sing N N 147
DT C7 H73 sing N N 148
DT C6 H6 sing N N 149
HOH O H1 sing N N 150
HOH O H2 sing N N 151
#
_ndb_struct_conf_na.entry_id 4RP2
_ndb_struct_conf_na.feature 'b-form double helix'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A DT 4 1_555 A DA 9 4_545 0.727 -0.138 -0.010 -1.047 -10.533 3.580 1 A_DT4:DA9_A A 4 ? A 9 ? 20 1
1 A DA 5 1_555 A DT 8 4_545 -0.042 -0.230 0.111 6.512 -13.575 1.157 2 A_DA5:DT8_A A 5 ? A 8 ? 20 1
1 A DG 6 1_555 A DC 7 4_545 -0.166 0.184 0.332 1.092 -7.612 -1.420 3 A_DG6:DC7_A A 6 ? A 7 ? 19 1
1 A DC 7 1_555 A DG 6 4_545 0.166 0.184 0.333 -1.092 -7.612 -1.420 4 A_DC7:DG6_A A 7 ? A 6 ? 19 1
1 A DT 8 1_555 A DA 5 4_545 0.042 -0.230 0.111 -6.512 -13.575 1.157 5 A_DT8:DA5_A A 8 ? A 5 ? 20 1
1 A DA 9 1_555 A DT 4 4_545 -0.727 -0.138 -0.010 1.047 -10.533 3.580 6 A_DA9:DT4_A A 9 ? A 4 ? 20 1
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A DT 4 1_555 A DA 9 4_545 A DA 5 1_555 A DT 8 4_545 -0.449 1.192 3.152 1.648 1.300 40.350 1.585 0.829 3.167 1.883 -2.388
40.403 1 AA_DT4DA5:DT8DA9_AA A 4 ? A 9 ? A 5 ? A 8 ?
1 A DA 5 1_555 A DT 8 4_545 A DG 6 1_555 A DC 7 4_545 0.299 0.058 3.430 -5.268 4.723 31.304 -0.781 -1.530 3.310 8.615 9.610
32.074 2 AA_DA5DG6:DC7DT8_AA A 5 ? A 8 ? A 6 ? A 7 ?
1 A DG 6 1_555 A DC 7 4_545 A DC 7 1_555 A DG 6 4_545 0.000 -0.199 3.310 0.000 2.273 37.343 -0.612 0.000 3.293 3.545 0.000
37.410 3 AA_DG6DC7:DG6DC7_AA A 6 ? A 7 ? A 7 ? A 6 ?
1 A DC 7 1_555 A DG 6 4_545 A DT 8 1_555 A DA 5 4_545 -0.299 0.058 3.430 5.268 4.723 31.304 -0.781 1.530 3.310 8.615 -9.610
32.074 4 AA_DC7DT8:DA5DG6_AA A 7 ? A 6 ? A 8 ? A 5 ?
1 A DT 8 1_555 A DA 5 4_545 A DA 9 1_555 A DT 4 4_545 0.449 1.192 3.152 -1.648 1.300 40.350 1.585 -0.829 3.167 1.883 2.388
40.403 5 AA_DT8DA9:DT4DA5_AA A 8 ? A 5 ? A 9 ? A 4 ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2 'MAGNESIUM ION' MG
3 water HOH
#
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'experimental model'
_pdbx_initial_refinement_model.source_name PDB
_pdbx_initial_refinement_model.accession_code 1P1Y
_pdbx_initial_refinement_model.details 'PDB ENTRY 1p1y'
#