data_4RP1
#
_entry.id 4RP1
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.379
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 4RP1 pdb_00004rp1 10.2210/pdb4rp1/pdb
NDB NA3273 ? ?
RCSB RCSB087618 ? ?
WWPDB D_1000087618 ? ?
#
loop_
_pdbx_database_related.db_name
_pdbx_database_related.db_id
_pdbx_database_related.details
_pdbx_database_related.content_type
PDB 4RNK 'Sequence and structure of a self-assembled 3-D DNA crystal: D(GGAAAATTTGGAG)' unspecified
PDB 1P1Y 'Crystal structure of a continuous three-dimensional DNA lattice.' unspecified
PDB 4RO4 . unspecified
PDB 4RO7 . unspecified
PDB 4RO8 . unspecified
PDB 4ROG . unspecified
PDB 4ROK . unspecified
PDB 4RON . unspecified
PDB 4ROO . unspecified
PDB 4ROY . unspecified
PDB 4ROZ . unspecified
PDB 4RP0 . unspecified
PDB 4RP2 . unspecified
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 4RP1
_pdbx_database_status.recvd_initial_deposition_date 2014-10-29
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.SG_entry ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_nmr_data ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Saoji, M.M.' 1
'Paukstelis, P.J.' 2
#
loop_
_citation.id
_citation.title
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation.journal_id_ASTM
_citation.country
_citation.journal_id_ISSN
_citation.journal_id_CSD
_citation.book_publisher
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_DOI
primary 'Probing the role of sequence in the assembly of three-dimensional DNA crystals.' Biopolymers 103 618 626 2015 BIPMAA US
0006-3525 0161 ? 26015367 10.1002/bip.22688
1 'Crystal structure of a continuous three-dimensional DNA lattice.' Chem.Biol. 11 1119 1126 2004 CBOLE2 UK
1074-5521 2050 ? 15324813 10.1016/j.chembiol.2004.05.021
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Saoji, M.' 1 ?
primary 'Zhang, D.' 2 ?
primary 'Paukstelis, P.J.' 3 ?
1 'Paukstelis, P.J.' 4 ?
1 'Nowakowski, J.' 5 ?
1 'Birktoft, J.J.' 6 ?
1 'Seeman, N.C.' 7 ?
#
_cell.entry_id 4RP1
_cell.length_a 40.805
_cell.length_b 40.805
_cell.length_c 51.668
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 120.00
_cell.Z_PDB 6
_cell.pdbx_unique_axis ?
_cell.length_a_esd ?
_cell.length_b_esd ?
_cell.length_c_esd ?
_cell.angle_alpha_esd ?
_cell.angle_beta_esd ?
_cell.angle_gamma_esd ?
#
_symmetry.entry_id 4RP1
_symmetry.space_group_name_H-M 'P 64'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 172
_symmetry.space_group_name_Hall ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn 'D(GGATACGTAGGAG)' 4080.672 1 ? ? ? ?
2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ?
3 water nat water 18.015 1 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type polydeoxyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code '(DG)(DG)(DA)(DT)(DA)(DC)(DG)(DT)(DA)(DG)(DG)(DA)(DG)'
_entity_poly.pdbx_seq_one_letter_code_can GGATACGTAGGAG
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 DG n
1 2 DG n
1 3 DA n
1 4 DT n
1 5 DA n
1 6 DC n
1 7 DG n
1 8 DT n
1 9 DA n
1 10 DG n
1 11 DG n
1 12 DA n
1 13 DG n
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num ?
_pdbx_entity_src_syn.pdbx_end_seq_num ?
_pdbx_entity_src_syn.organism_scientific ?
_pdbx_entity_src_syn.organism_common_name ?
_pdbx_entity_src_syn.ncbi_taxonomy_id ?
_pdbx_entity_src_syn.details 'DNA molecule synthesized using a DNA synthesizer'
#
_struct_ref.id 1
_struct_ref.db_name PDB
_struct_ref.db_code 4RP1
_struct_ref.pdbx_db_accession 4RP1
_struct_ref.entity_id 1
_struct_ref.pdbx_align_begin ?
_struct_ref.pdbx_seq_one_letter_code GGATACGTAGGAG
_struct_ref.pdbx_db_isoform ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 4RP1
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 13
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession 4RP1
_struct_ref_seq.db_align_beg 1
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 13
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 13
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221
DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208
HOH non-polymer . WATER ? 'H2 O' 18.015
MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305
#
_exptl.entry_id 4RP1
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number 1
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 3.04
_exptl_crystal.density_percent_sol 59.58
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.preparation ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method EVAPORATION
_exptl_crystal_grow.temp 298
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH ?
_exptl_crystal_grow.pdbx_details
'120mM Magnesium Formate, 50mM Lithium Chloride, 10% MPD, pH none, EVAPORATION, temperature 298K'
_exptl_crystal_grow.pdbx_pH_range none
#
_diffrn.id 1
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector PIXEL
_diffrn_detector.type 'DECTRIS PILATUS 6M-F'
_diffrn_detector.pdbx_collection_date 2014-06-29
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator 'Si(111)'
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 0.979200
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source SYNCHROTRON
_diffrn_source.type 'APS BEAMLINE 24-ID-C'
_diffrn_source.pdbx_synchrotron_site APS
_diffrn_source.pdbx_synchrotron_beamline 24-ID-C
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list 0.979200
#
_reflns.entry_id 4RP1
_reflns.observed_criterion_sigma_I 0
_reflns.observed_criterion_sigma_F 0
_reflns.d_resolution_low 35.34
_reflns.d_resolution_high 2.27
_reflns.number_obs 2219
_reflns.number_all ?
_reflns.percent_possible_obs ?
_reflns.pdbx_Rmerge_I_obs 0.037
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_sigmaI 16.4
_reflns.B_iso_Wilson_estimate ?
_reflns.pdbx_redundancy 2.8
_reflns.R_free_details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_ordinal 1
_reflns.pdbx_diffrn_id 1
#
_reflns_shell.d_res_high 2.27
_reflns_shell.d_res_low 2.40
_reflns_shell.percent_possible_all ?
_reflns_shell.Rmerge_I_obs 1.273
_reflns_shell.pdbx_Rsym_value ?
_reflns_shell.meanI_over_sigI_obs 1.0
_reflns_shell.pdbx_redundancy 2.9
_reflns_shell.percent_possible_obs ?
_reflns_shell.number_unique_all 321
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_unique_obs ?
_reflns_shell.pdbx_chi_squared ?
_reflns_shell.pdbx_ordinal 1
_reflns_shell.pdbx_diffrn_id 1
#
_refine.entry_id 4RP1
_refine.ls_number_reflns_obs 2003
_refine.ls_number_reflns_all ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F .
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 35.34
_refine.ls_d_res_high 2.27
_refine.ls_percent_reflns_obs 96.36
_refine.ls_R_factor_obs 0.20616
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work 0.20244
_refine.ls_R_factor_R_free 0.24394
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free 9.0
_refine.ls_number_reflns_R_free 197
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.correlation_coeff_Fo_to_Fc 0.971
_refine.correlation_coeff_Fo_to_Fc_free 0.956
_refine.B_iso_mean 97.348
_refine.aniso_B[1][1] 0.19
_refine.aniso_B[2][2] 0.19
_refine.aniso_B[3][3] -0.61
_refine.aniso_B[1][2] 0.09
_refine.aniso_B[1][3] 0.00
_refine.aniso_B[2][3] -0.00
_refine.solvent_model_details MASK
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_solvent_vdw_probe_radii 1.30
_refine.pdbx_solvent_ion_probe_radii 1.00
_refine.pdbx_solvent_shrinkage_radii 1.00
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS'
_refine.pdbx_starting_model 'PDB ENTRY 1p1y'
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD'
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_overall_ESU_R 0.246
_refine.pdbx_overall_ESU_R_Free 0.207
_refine.overall_SU_ML 0.249
_refine.pdbx_overall_phase_error ?
_refine.overall_SU_B 26.901
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.ls_redundancy_reflns_obs ?
_refine.B_iso_min ?
_refine.B_iso_max ?
_refine.overall_SU_R_free ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_diffrn_id 1
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 254
_refine_hist.pdbx_number_atoms_ligand 1
_refine_hist.number_atoms_solvent 1
_refine_hist.number_atoms_total 256
_refine_hist.d_res_high 2.27
_refine_hist.d_res_low 35.34
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_restraint_function
_refine_ls_restr.pdbx_refine_id
r_bond_refined_d 0.007 0.011 ? 286 ? 'X-RAY DIFFRACTION'
r_bond_other_d 0.002 0.020 ? 135 ? 'X-RAY DIFFRACTION'
r_angle_refined_deg 1.294 1.155 ? 442 ? 'X-RAY DIFFRACTION'
r_angle_other_deg 1.682 3.000 ? 319 ? 'X-RAY DIFFRACTION'
r_dihedral_angle_1_deg ? ? ? ? ? 'X-RAY DIFFRACTION'
r_dihedral_angle_2_deg ? ? ? ? ? 'X-RAY DIFFRACTION'
r_dihedral_angle_3_deg ? ? ? ? ? 'X-RAY DIFFRACTION'
r_dihedral_angle_4_deg ? ? ? ? ? 'X-RAY DIFFRACTION'
r_chiral_restr 0.078 0.200 ? 36 ? 'X-RAY DIFFRACTION'
r_gen_planes_refined 0.010 0.020 ? 151 ? 'X-RAY DIFFRACTION'
r_gen_planes_other 0.001 0.020 ? 62 ? 'X-RAY DIFFRACTION'
r_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION'
r_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION'
r_nbtor_refined ? ? ? ? ? 'X-RAY DIFFRACTION'
r_nbtor_other ? ? ? ? ? 'X-RAY DIFFRACTION'
r_xyhbond_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION'
r_xyhbond_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION'
r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION'
r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION'
r_symmetry_vdw_refined ? ? ? ? ? 'X-RAY DIFFRACTION'
r_symmetry_vdw_other ? ? ? ? ? 'X-RAY DIFFRACTION'
r_symmetry_hbond_refined ? ? ? ? ? 'X-RAY DIFFRACTION'
r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION'
r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION'
r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION'
r_mcbond_it ? ? ? ? ? 'X-RAY DIFFRACTION'
r_mcbond_other ? ? ? ? ? 'X-RAY DIFFRACTION'
r_mcangle_it ? ? ? ? ? 'X-RAY DIFFRACTION'
r_mcangle_other ? ? ? ? ? 'X-RAY DIFFRACTION'
r_scbond_it 2.730 5.420 ? 286 ? 'X-RAY DIFFRACTION'
r_scbond_other 2.704 5.395 ? 284 ? 'X-RAY DIFFRACTION'
r_scangle_it ? ? ? ? ? 'X-RAY DIFFRACTION'
r_scangle_other 4.511 8.132 ? 439 ? 'X-RAY DIFFRACTION'
r_long_range_B_refined 5.712 53.134 ? 418 ? 'X-RAY DIFFRACTION'
r_long_range_B_other 5.697 53.007 ? 418 ? 'X-RAY DIFFRACTION'
r_rigid_bond_restr ? ? ? ? ? 'X-RAY DIFFRACTION'
r_sphericity_free ? ? ? ? ? 'X-RAY DIFFRACTION'
r_sphericity_bonded ? ? ? ? ? 'X-RAY DIFFRACTION'
#
_refine_ls_shell.pdbx_total_number_of_bins_used 20
_refine_ls_shell.d_res_high 2.274
_refine_ls_shell.d_res_low 2.333
_refine_ls_shell.number_reflns_R_work 140
_refine_ls_shell.R_factor_R_work 0.432
_refine_ls_shell.percent_reflns_obs 94.97
_refine_ls_shell.R_factor_R_free 0.330
_refine_ls_shell.R_factor_R_free_error ?
_refine_ls_shell.percent_reflns_R_free ?
_refine_ls_shell.number_reflns_R_free 11
_refine_ls_shell.number_reflns_all ?
_refine_ls_shell.R_factor_all ?
_refine_ls_shell.number_reflns_obs ?
_refine_ls_shell.redundancy_reflns_obs ?
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
#
_struct.entry_id 4RP1
_struct.title 'Sequence and structure of a self-assembled 3-D DNA crystal: D(GGATACGTAGGAG)'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 4RP1
_struct_keywords.pdbx_keywords DNA
_struct_keywords.text 'Self-assembling 3D DNA crystal, DNA'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 3 ?
#
_struct_biol.id 1
_struct_biol.details ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
metalc1 metalc ? ? B MG . MG ? ? ? 1_555 C HOH . O ? ? A MG 101 A HOH 201 1_555 ? ? ? ? ? ? ? 1.903 ? ?
hydrog1 hydrog ? ? A DT 4 N3 ? ? ? 1_555 A DA 9 N1 ? ? A DT 4 A DA 9 4_545 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog2 hydrog ? ? A DT 4 O4 ? ? ? 1_555 A DA 9 N6 ? ? A DT 4 A DA 9 4_545 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog3 hydrog ? ? A DA 5 N1 ? ? ? 1_555 A DT 8 N3 ? ? A DA 5 A DT 8 4_545 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog4 hydrog ? ? A DA 5 N6 ? ? ? 1_555 A DT 8 O4 ? ? A DA 5 A DT 8 4_545 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog5 hydrog ? ? A DC 6 N3 ? ? ? 1_555 A DG 7 N1 ? ? A DC 6 A DG 7 4_545 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog6 hydrog ? ? A DC 6 N4 ? ? ? 1_555 A DG 7 O6 ? ? A DC 6 A DG 7 4_545 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog7 hydrog ? ? A DC 6 O2 ? ? ? 1_555 A DG 7 N2 ? ? A DC 6 A DG 7 4_545 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog8 hydrog ? ? A DG 7 N1 ? ? ? 1_555 A DC 6 N3 ? ? A DG 7 A DC 6 4_545 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog9 hydrog ? ? A DG 7 N2 ? ? ? 1_555 A DC 6 O2 ? ? A DG 7 A DC 6 4_545 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog10 hydrog ? ? A DG 7 O6 ? ? ? 1_555 A DC 6 N4 ? ? A DG 7 A DC 6 4_545 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog11 hydrog ? ? A DT 8 N3 ? ? ? 1_555 A DA 5 N1 ? ? A DT 8 A DA 5 4_545 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog12 hydrog ? ? A DT 8 O4 ? ? ? 1_555 A DA 5 N6 ? ? A DT 8 A DA 5 4_545 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog13 hydrog ? ? A DA 9 N1 ? ? ? 1_555 A DT 4 N3 ? ? A DA 9 A DT 4 4_545 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog14 hydrog ? ? A DA 9 N6 ? ? ? 1_555 A DT 4 O4 ? ? A DA 9 A DT 4 4_545 ? ? ? ? ? ? WATSON-CRICK ? ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
metalc ? ?
hydrog ? ?
#
_struct_site.id AC1
_struct_site.pdbx_evidence_code Software
_struct_site.pdbx_auth_asym_id A
_struct_site.pdbx_auth_comp_id MG
_struct_site.pdbx_auth_seq_id 101
_struct_site.pdbx_auth_ins_code ?
_struct_site.pdbx_num_residues 2
_struct_site.details 'BINDING SITE FOR RESIDUE MG A 101'
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 2 DA A 3 ? DA A 3 . ? 1_555 ?
2 AC1 2 HOH C . ? HOH A 201 . ? 1_555 ?
#
_database_PDB_matrix.entry_id 4RP1
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_atom_sites.entry_id 4RP1
_atom_sites.fract_transf_matrix[1][1] 0.024507
_atom_sites.fract_transf_matrix[1][2] 0.014149
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] -0.000000
_atom_sites.fract_transf_matrix[2][2] 0.028298
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] -0.000000
_atom_sites.fract_transf_matrix[3][3] 0.019354
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
MG
N
O
P
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 O "O5'" . DG A 1 1 ? 1.612 -22.441 7.336 1.00 105.30 ? 1 DG A "O5'" 1
ATOM 2 C "C5'" . DG A 1 1 ? 0.459 -23.203 6.900 1.00 104.18 ? 1 DG A "C5'" 1
ATOM 3 C "C4'" . DG A 1 1 ? 0.562 -23.548 5.431 1.00 99.65 ? 1 DG A "C4'" 1
ATOM 4 O "O4'" . DG A 1 1 ? 0.164 -22.414 4.616 1.00 96.54 ? 1 DG A "O4'" 1
ATOM 5 C "C3'" . DG A 1 1 ? 1.974 -23.891 4.976 1.00 97.11 ? 1 DG A "C3'" 1
ATOM 6 O "O3'" . DG A 1 1 ? 1.893 -24.788 3.866 1.00 97.31 ? 1 DG A "O3'" 1
ATOM 7 C "C2'" . DG A 1 1 ? 2.511 -22.540 4.547 1.00 93.07 ? 1 DG A "C2'" 1
ATOM 8 C "C1'" . DG A 1 1 ? 1.283 -21.920 3.887 1.00 90.91 ? 1 DG A "C1'" 1
ATOM 9 N N9 . DG A 1 1 ? 1.253 -20.456 3.916 1.00 86.42 ? 1 DG A N9 1
ATOM 10 C C8 . DG A 1 1 ? 1.296 -19.604 2.839 1.00 85.42 ? 1 DG A C8 1
ATOM 11 N N7 . DG A 1 1 ? 1.305 -18.343 3.183 1.00 83.34 ? 1 DG A N7 1
ATOM 12 C C5 . DG A 1 1 ? 1.282 -18.366 4.570 1.00 82.89 ? 1 DG A C5 1
ATOM 13 C C6 . DG A 1 1 ? 1.286 -17.300 5.508 1.00 84.48 ? 1 DG A C6 1
ATOM 14 O O6 . DG A 1 1 ? 1.308 -16.081 5.293 1.00 83.70 ? 1 DG A O6 1
ATOM 15 N N1 . DG A 1 1 ? 1.266 -17.773 6.815 1.00 86.51 ? 1 DG A N1 1
ATOM 16 C C2 . DG A 1 1 ? 1.250 -19.100 7.175 1.00 89.34 ? 1 DG A C2 1
ATOM 17 N N2 . DG A 1 1 ? 1.223 -19.363 8.488 1.00 93.57 ? 1 DG A N2 1
ATOM 18 N N3 . DG A 1 1 ? 1.263 -20.098 6.313 1.00 86.67 ? 1 DG A N3 1
ATOM 19 C C4 . DG A 1 1 ? 1.274 -19.663 5.038 1.00 84.93 ? 1 DG A C4 1
ATOM 20 P P . DG A 1 2 ? 3.226 -25.479 3.296 1.00 98.98 ? 2 DG A P 1
ATOM 21 O OP1 . DG A 1 2 ? 2.807 -26.507 2.301 1.00 102.92 ? 2 DG A OP1 1
ATOM 22 O OP2 . DG A 1 2 ? 4.095 -25.849 4.459 1.00 98.76 ? 2 DG A OP2 1
ATOM 23 O "O5'" . DG A 1 2 ? 3.959 -24.327 2.462 1.00 90.45 ? 2 DG A "O5'" 1
ATOM 24 C "C5'" . DG A 1 2 ? 3.409 -23.786 1.240 1.00 85.19 ? 2 DG A "C5'" 1
ATOM 25 C "C4'" . DG A 1 2 ? 4.262 -22.626 0.792 1.00 82.41 ? 2 DG A "C4'" 1
ATOM 26 O "O4'" . DG A 1 2 ? 4.045 -21.485 1.652 1.00 79.49 ? 2 DG A "O4'" 1
ATOM 27 C "C3'" . DG A 1 2 ? 5.762 -22.921 0.864 1.00 83.00 ? 2 DG A "C3'" 1
ATOM 28 O "O3'" . DG A 1 2 ? 6.382 -22.467 -0.333 1.00 84.01 ? 2 DG A "O3'" 1
ATOM 29 C "C2'" . DG A 1 2 ? 6.236 -22.124 2.061 1.00 79.95 ? 2 DG A "C2'" 1
ATOM 30 C "C1'" . DG A 1 2 ? 5.296 -20.947 2.013 1.00 76.37 ? 2 DG A "C1'" 1
ATOM 31 N N9 . DG A 1 2 ? 5.145 -20.268 3.288 1.00 76.90 ? 2 DG A N9 1
ATOM 32 C C8 . DG A 1 2 ? 5.248 -20.815 4.546 1.00 80.07 ? 2 DG A C8 1
ATOM 33 N N7 . DG A 1 2 ? 5.092 -19.937 5.499 1.00 82.41 ? 2 DG A N7 1
ATOM 34 C C5 . DG A 1 2 ? 4.892 -18.737 4.831 1.00 79.56 ? 2 DG A C5 1
ATOM 35 C C6 . DG A 1 2 ? 4.674 -17.431 5.336 1.00 81.62 ? 2 DG A C6 1
ATOM 36 O O6 . DG A 1 2 ? 4.625 -17.060 6.516 1.00 86.12 ? 2 DG A O6 1
ATOM 37 N N1 . DG A 1 2 ? 4.528 -16.503 4.308 1.00 80.11 ? 2 DG A N1 1
ATOM 38 C C2 . DG A 1 2 ? 4.600 -16.795 2.967 1.00 77.31 ? 2 DG A C2 1
ATOM 39 N N2 . DG A 1 2 ? 4.428 -15.766 2.128 1.00 80.96 ? 2 DG A N2 1
ATOM 40 N N3 . DG A 1 2 ? 4.808 -18.007 2.484 1.00 71.81 ? 2 DG A N3 1
ATOM 41 C C4 . DG A 1 2 ? 4.925 -18.926 3.465 1.00 74.94 ? 2 DG A C4 1
ATOM 42 P P . DA A 1 3 ? 7.236 -23.476 -1.210 1.00 88.33 ? 3 DA A P 1
ATOM 43 O OP1 . DA A 1 3 ? 6.846 -24.862 -0.841 1.00 92.70 ? 3 DA A OP1 1
ATOM 44 O OP2 . DA A 1 3 ? 8.673 -23.089 -1.058 1.00 94.60 ? 3 DA A OP2 1
ATOM 45 O "O5'" . DA A 1 3 ? 6.690 -23.172 -2.677 1.00 87.34 ? 3 DA A "O5'" 1
ATOM 46 C "C5'" . DA A 1 3 ? 5.661 -22.187 -2.908 1.00 87.72 ? 3 DA A "C5'" 1
ATOM 47 C "C4'" . DA A 1 3 ? 5.851 -21.458 -4.223 1.00 87.08 ? 3 DA A "C4'" 1
ATOM 48 O "O4'" . DA A 1 3 ? 6.080 -20.064 -3.930 1.00 84.75 ? 3 DA A "O4'" 1
ATOM 49 C "C3'" . DA A 1 3 ? 7.052 -21.851 -5.079 1.00 88.46 ? 3 DA A "C3'" 1
ATOM 50 O "O3'" . DA A 1 3 ? 6.952 -21.303 -6.419 1.00 93.51 ? 3 DA A "O3'" 1
ATOM 51 C "C2'" . DA A 1 3 ? 8.157 -21.074 -4.393 1.00 84.93 ? 3 DA A "C2'" 1
ATOM 52 C "C1'" . DA A 1 3 ? 7.451 -19.747 -4.162 1.00 80.65 ? 3 DA A "C1'" 1
ATOM 53 N N9 . DA A 1 3 ? 7.903 -18.953 -3.029 1.00 79.21 ? 3 DA A N9 1
ATOM 54 C C8 . DA A 1 3 ? 7.861 -19.299 -1.702 1.00 79.78 ? 3 DA A C8 1
ATOM 55 N N7 . DA A 1 3 ? 8.267 -18.347 -0.897 1.00 79.15 ? 3 DA A N7 1
ATOM 56 C C5 . DA A 1 3 ? 8.558 -17.291 -1.749 1.00 78.45 ? 3 DA A C5 1
ATOM 57 C C6 . DA A 1 3 ? 9.016 -15.981 -1.513 1.00 81.32 ? 3 DA A C6 1
ATOM 58 N N6 . DA A 1 3 ? 9.294 -15.506 -0.296 1.00 85.41 ? 3 DA A N6 1
ATOM 59 N N1 . DA A 1 3 ? 9.196 -15.172 -2.582 1.00 80.32 ? 3 DA A N1 1
ATOM 60 C C2 . DA A 1 3 ? 8.915 -15.654 -3.801 1.00 81.91 ? 3 DA A C2 1
ATOM 61 N N3 . DA A 1 3 ? 8.467 -16.863 -4.148 1.00 78.89 ? 3 DA A N3 1
ATOM 62 C C4 . DA A 1 3 ? 8.312 -17.642 -3.063 1.00 78.51 ? 3 DA A C4 1
ATOM 63 P P . DT A 1 4 ? 6.177 -22.085 -7.662 1.00 96.43 ? 4 DT A P 1
ATOM 64 O OP1 . DT A 1 4 ? 6.527 -21.364 -8.923 1.00 92.69 ? 4 DT A OP1 1
ATOM 65 O OP2 . DT A 1 4 ? 4.738 -22.260 -7.299 1.00 96.06 ? 4 DT A OP2 1
ATOM 66 O "O5'" . DT A 1 4 ? 6.868 -23.526 -7.700 1.00 96.73 ? 4 DT A "O5'" 1
ATOM 67 C "C5'" . DT A 1 4 ? 8.287 -23.620 -7.900 1.00 95.42 ? 4 DT A "C5'" 1
ATOM 68 C "C4'" . DT A 1 4 ? 8.717 -24.981 -8.401 1.00 98.02 ? 4 DT A "C4'" 1
ATOM 69 O "O4'" . DT A 1 4 ? 7.707 -25.582 -9.245 1.00 97.75 ? 4 DT A "O4'" 1
ATOM 70 C "C3'" . DT A 1 4 ? 9.979 -24.890 -9.253 1.00 100.80 ? 4 DT A "C3'" 1
ATOM 71 O "O3'" . DT A 1 4 ? 10.945 -25.897 -8.961 1.00 109.69 ? 4 DT A "O3'" 1
ATOM 72 C "C2'" . DT A 1 4 ? 9.465 -24.953 -10.676 1.00 99.86 ? 4 DT A "C2'" 1
ATOM 73 C "C1'" . DT A 1 4 ? 8.187 -25.743 -10.577 1.00 97.87 ? 4 DT A "C1'" 1
ATOM 74 N N1 . DT A 1 4 ? 7.181 -25.192 -11.495 1.00 93.66 ? 4 DT A N1 1
ATOM 75 C C2 . DT A 1 4 ? 7.358 -25.401 -12.841 1.00 95.22 ? 4 DT A C2 1
ATOM 76 O O2 . DT A 1 4 ? 8.272 -26.069 -13.298 1.00 96.80 ? 4 DT A O2 1
ATOM 77 N N3 . DT A 1 4 ? 6.395 -24.833 -13.637 1.00 95.58 ? 4 DT A N3 1
ATOM 78 C C4 . DT A 1 4 ? 5.296 -24.099 -13.225 1.00 93.96 ? 4 DT A C4 1
ATOM 79 O O4 . DT A 1 4 ? 4.498 -23.670 -14.054 1.00 97.81 ? 4 DT A O4 1
ATOM 80 C C5 . DT A 1 4 ? 5.191 -23.898 -11.803 1.00 90.02 ? 4 DT A C5 1
ATOM 81 C C7 . DT A 1 4 ? 4.044 -23.103 -11.267 1.00 89.95 ? 4 DT A C7 1
ATOM 82 C C6 . DT A 1 4 ? 6.138 -24.427 -11.021 1.00 90.52 ? 4 DT A C6 1
ATOM 83 P P . DA A 1 5 ? 12.442 -25.461 -8.622 1.00 111.93 ? 5 DA A P 1
ATOM 84 O OP1 . DA A 1 5 ? 12.825 -26.156 -7.358 1.00 116.66 ? 5 DA A OP1 1
ATOM 85 O OP2 . DA A 1 5 ? 12.541 -23.968 -8.719 1.00 104.33 ? 5 DA A OP2 1
ATOM 86 O "O5'" . DA A 1 5 ? 13.298 -26.078 -9.817 1.00 115.64 ? 5 DA A "O5'" 1
ATOM 87 C "C5'" . DA A 1 5 ? 12.717 -26.768 -10.943 1.00 119.13 ? 5 DA A "C5'" 1
ATOM 88 C "C4'" . DA A 1 5 ? 13.472 -26.430 -12.209 1.00 121.87 ? 5 DA A "C4'" 1
ATOM 89 O "O4'" . DA A 1 5 ? 12.607 -25.758 -13.159 1.00 119.05 ? 5 DA A "O4'" 1
ATOM 90 C "C3'" . DA A 1 5 ? 14.665 -25.493 -12.038 1.00 120.48 ? 5 DA A "C3'" 1
ATOM 91 O "O3'" . DA A 1 5 ? 15.592 -25.880 -13.062 1.00 128.45 ? 5 DA A "O3'" 1
ATOM 92 C "C2'" . DA A 1 5 ? 14.030 -24.119 -12.206 1.00 113.82 ? 5 DA A "C2'" 1
ATOM 93 C "C1'" . DA A 1 5 ? 12.972 -24.380 -13.281 1.00 113.29 ? 5 DA A "C1'" 1
ATOM 94 N N9 . DA A 1 5 ? 11.736 -23.586 -13.234 1.00 104.58 ? 5 DA A N9 1
ATOM 95 C C8 . DA A 1 5 ? 11.147 -22.939 -12.173 1.00 97.91 ? 5 DA A C8 1
ATOM 96 N N7 . DA A 1 5 ? 10.010 -22.357 -12.475 1.00 92.01 ? 5 DA A N7 1
ATOM 97 C C5 . DA A 1 5 ? 9.837 -22.644 -13.822 1.00 93.22 ? 5 DA A C5 1
ATOM 98 C C6 . DA A 1 5 ? 8.823 -22.315 -14.734 1.00 91.07 ? 5 DA A C6 1
ATOM 99 N N6 . DA A 1 5 ? 7.754 -21.584 -14.415 1.00 89.58 ? 5 DA A N6 1
ATOM 100 N N1 . DA A 1 5 ? 8.961 -22.738 -16.010 1.00 94.89 ? 5 DA A N1 1
ATOM 101 C C2 . DA A 1 5 ? 10.040 -23.464 -16.331 1.00 101.37 ? 5 DA A C2 1
ATOM 102 N N3 . DA A 1 5 ? 11.051 -23.857 -15.557 1.00 102.97 ? 5 DA A N3 1
ATOM 103 C C4 . DA A 1 5 ? 10.889 -23.403 -14.301 1.00 99.82 ? 5 DA A C4 1
ATOM 104 P P . DC A 1 6 ? 17.013 -25.159 -13.216 1.00 129.19 ? 6 DC A P 1
ATOM 105 O OP1 . DC A 1 6 ? 18.014 -26.230 -13.518 1.00 136.63 ? 6 DC A OP1 1
ATOM 106 O OP2 . DC A 1 6 ? 17.210 -24.275 -12.032 1.00 127.70 ? 6 DC A OP2 1
ATOM 107 O "O5'" . DC A 1 6 ? 16.782 -24.195 -14.467 1.00 121.36 ? 6 DC A "O5'" 1
ATOM 108 C "C5'" . DC A 1 6 ? 16.318 -24.725 -15.729 1.00 124.09 ? 6 DC A "C5'" 1
ATOM 109 C "C4'" . DC A 1 6 ? 15.815 -23.632 -16.646 1.00 119.55 ? 6 DC A "C4'" 1
ATOM 110 O "O4'" . DC A 1 6 ? 14.551 -23.133 -16.171 1.00 112.90 ? 6 DC A "O4'" 1
ATOM 111 C "C3'" . DC A 1 6 ? 16.718 -22.404 -16.770 1.00 118.52 ? 6 DC A "C3'" 1
ATOM 112 O "O3'" . DC A 1 6 ? 17.416 -22.379 -18.020 1.00 127.40 ? 6 DC A "O3'" 1
ATOM 113 C "C2'" . DC A 1 6 ? 15.761 -21.224 -16.701 1.00 111.42 ? 6 DC A "C2'" 1
ATOM 114 C "C1'" . DC A 1 6 ? 14.384 -21.850 -16.718 1.00 106.91 ? 6 DC A "C1'" 1
ATOM 115 N N1 . DC A 1 6 ? 13.406 -21.134 -15.899 1.00 97.38 ? 6 DC A N1 1
ATOM 116 C C2 . DC A 1 6 ? 12.281 -20.584 -16.520 1.00 94.12 ? 6 DC A C2 1
ATOM 117 O O2 . DC A 1 6 ? 12.140 -20.730 -17.744 1.00 95.34 ? 6 DC A O2 1
ATOM 118 N N3 . DC A 1 6 ? 11.375 -19.917 -15.774 1.00 89.73 ? 6 DC A N3 1
ATOM 119 C C4 . DC A 1 6 ? 11.560 -19.790 -14.458 1.00 90.75 ? 6 DC A C4 1
ATOM 120 N N4 . DC A 1 6 ? 10.634 -19.133 -13.757 1.00 88.63 ? 6 DC A N4 1
ATOM 121 C C5 . DC A 1 6 ? 12.703 -20.333 -13.801 1.00 89.94 ? 6 DC A C5 1
ATOM 122 C C6 . DC A 1 6 ? 13.592 -20.990 -14.553 1.00 93.14 ? 6 DC A C6 1
ATOM 123 P P . DG A 1 7 ? 18.490 -21.216 -18.327 1.00 129.48 ? 7 DG A P 1
ATOM 124 O OP1 . DG A 1 7 ? 19.700 -21.851 -18.910 1.00 136.20 ? 7 DG A OP1 1
ATOM 125 O OP2 . DG A 1 7 ? 18.609 -20.344 -17.117 1.00 123.06 ? 7 DG A OP2 1
ATOM 126 O "O5'" . DG A 1 7 ? 17.790 -20.355 -19.473 1.00 126.67 ? 7 DG A "O5'" 1
ATOM 127 C "C5'" . DG A 1 7 ? 16.880 -20.936 -20.438 1.00 125.71 ? 7 DG A "C5'" 1
ATOM 128 C "C4'" . DG A 1 7 ? 16.071 -19.845 -21.104 1.00 120.13 ? 7 DG A "C4'" 1
ATOM 129 O "O4'" . DG A 1 7 ? 15.038 -19.387 -20.200 1.00 112.08 ? 7 DG A "O4'" 1
ATOM 130 C "C3'" . DG A 1 7 ? 16.868 -18.595 -21.469 1.00 119.23 ? 7 DG A "C3'" 1
ATOM 131 O "O3'" . DG A 1 7 ? 16.338 -18.044 -22.680 1.00 124.95 ? 7 DG A "O3'" 1
ATOM 132 C "C2'" . DG A 1 7 ? 16.649 -17.691 -20.268 1.00 109.65 ? 7 DG A "C2'" 1
ATOM 133 C "C1'" . DG A 1 7 ? 15.208 -18.006 -19.925 1.00 103.24 ? 7 DG A "C1'" 1
ATOM 134 N N9 . DG A 1 7 ? 14.829 -17.785 -18.539 1.00 92.90 ? 7 DG A N9 1
ATOM 135 C C8 . DG A 1 7 ? 15.559 -18.071 -17.409 1.00 90.24 ? 7 DG A C8 1
ATOM 136 N N7 . DG A 1 7 ? 14.926 -17.780 -16.304 1.00 84.62 ? 7 DG A N7 1
ATOM 137 C C5 . DG A 1 7 ? 13.703 -17.279 -16.732 1.00 83.42 ? 7 DG A C5 1
ATOM 138 C C6 . DG A 1 7 ? 12.587 -16.812 -15.986 1.00 81.14 ? 7 DG A C6 1
ATOM 139 O O6 . DG A 1 7 ? 12.457 -16.735 -14.756 1.00 81.26 ? 7 DG A O6 1
ATOM 140 N N1 . DG A 1 7 ? 11.549 -16.408 -16.819 1.00 79.77 ? 7 DG A N1 1
ATOM 141 C C2 . DG A 1 7 ? 11.573 -16.455 -18.191 1.00 84.50 ? 7 DG A C2 1
ATOM 142 N N2 . DG A 1 7 ? 10.469 -16.022 -18.817 1.00 86.47 ? 7 DG A N2 1
ATOM 143 N N3 . DG A 1 7 ? 12.603 -16.894 -18.898 1.00 86.68 ? 7 DG A N3 1
ATOM 144 C C4 . DG A 1 7 ? 13.625 -17.288 -18.109 1.00 87.24 ? 7 DG A C4 1
ATOM 145 P P . DT A 1 8 ? 17.072 -16.804 -23.388 1.00 126.36 ? 8 DT A P 1
ATOM 146 O OP1 . DT A 1 8 ? 17.707 -17.309 -24.633 1.00 134.40 ? 8 DT A OP1 1
ATOM 147 O OP2 . DT A 1 8 ? 17.896 -16.097 -22.362 1.00 116.83 ? 8 DT A OP2 1
ATOM 148 O "O5'" . DT A 1 8 ? 15.863 -15.863 -23.835 1.00 123.95 ? 8 DT A "O5'" 1
ATOM 149 C "C5'" . DT A 1 8 ? 14.473 -16.228 -23.674 1.00 120.24 ? 8 DT A "C5'" 1
ATOM 150 C "C4'" . DT A 1 8 ? 13.650 -14.981 -23.452 1.00 113.89 ? 8 DT A "C4'" 1
ATOM 151 O "O4'" . DT A 1 8 ? 13.298 -14.834 -22.055 1.00 105.28 ? 8 DT A "O4'" 1
ATOM 152 C "C3'" . DT A 1 8 ? 14.369 -13.687 -23.827 1.00 113.39 ? 8 DT A "C3'" 1
ATOM 153 O "O3'" . DT A 1 8 ? 13.415 -12.890 -24.522 1.00 119.18 ? 8 DT A "O3'" 1
ATOM 154 C "C2'" . DT A 1 8 ? 14.814 -13.130 -22.486 1.00 104.77 ? 8 DT A "C2'" 1
ATOM 155 C "C1'" . DT A 1 8 ? 13.659 -13.543 -21.606 1.00 99.99 ? 8 DT A "C1'" 1
ATOM 156 N N1 . DT A 1 8 ? 13.958 -13.631 -20.164 1.00 94.80 ? 8 DT A N1 1
ATOM 157 C C2 . DT A 1 8 ? 12.986 -13.245 -19.263 1.00 91.10 ? 8 DT A C2 1
ATOM 158 O O2 . DT A 1 8 ? 11.887 -12.823 -19.599 1.00 91.30 ? 8 DT A O2 1
ATOM 159 N N3 . DT A 1 8 ? 13.353 -13.363 -17.945 1.00 83.87 ? 8 DT A N3 1
ATOM 160 C C4 . DT A 1 8 ? 14.553 -13.832 -17.452 1.00 83.23 ? 8 DT A C4 1
ATOM 161 O O4 . DT A 1 8 ? 14.728 -13.911 -16.239 1.00 85.07 ? 8 DT A O4 1
ATOM 162 C C5 . DT A 1 8 ? 15.518 -14.222 -18.448 1.00 87.12 ? 8 DT A C5 1
ATOM 163 C C7 . DT A 1 8 ? 16.846 -14.748 -18.002 1.00 89.69 ? 8 DT A C7 1
ATOM 164 C C6 . DT A 1 8 ? 15.181 -14.101 -19.737 1.00 91.89 ? 8 DT A C6 1
ATOM 165 P P . DA A 1 9 ? 13.750 -11.391 -24.924 1.00 120.12 ? 9 DA A P 1
ATOM 166 O OP1 . DA A 1 9 ? 13.155 -11.145 -26.268 1.00 123.19 ? 9 DA A OP1 1
ATOM 167 O OP2 . DA A 1 9 ? 15.207 -11.147 -24.694 1.00 117.95 ? 9 DA A OP2 1
ATOM 168 O "O5'" . DA A 1 9 ? 12.895 -10.582 -23.859 1.00 112.73 ? 9 DA A "O5'" 1
ATOM 169 C "C5'" . DA A 1 9 ? 11.501 -10.870 -23.718 1.00 112.98 ? 9 DA A "C5'" 1
ATOM 170 C "C4'" . DA A 1 9 ? 10.857 -9.746 -22.950 1.00 110.73 ? 9 DA A "C4'" 1
ATOM 171 O "O4'" . DA A 1 9 ? 11.236 -9.853 -21.559 1.00 106.72 ? 9 DA A "O4'" 1
ATOM 172 C "C3'" . DA A 1 9 ? 11.318 -8.367 -23.410 1.00 112.00 ? 9 DA A "C3'" 1
ATOM 173 O "O3'" . DA A 1 9 ? 10.203 -7.481 -23.379 1.00 115.98 ? 9 DA A "O3'" 1
ATOM 174 C "C2'" . DA A 1 9 ? 12.443 -8.026 -22.447 1.00 107.19 ? 9 DA A "C2'" 1
ATOM 175 C "C1'" . DA A 1 9 ? 12.063 -8.764 -21.170 1.00 100.45 ? 9 DA A "C1'" 1
ATOM 176 N N9 . DA A 1 9 ? 13.172 -9.306 -20.384 1.00 91.72 ? 9 DA A N9 1
ATOM 177 C C8 . DA A 1 9 ? 14.414 -9.739 -20.789 1.00 90.58 ? 9 DA A C8 1
ATOM 178 N N7 . DA A 1 9 ? 15.167 -10.175 -19.806 1.00 87.03 ? 9 DA A N7 1
ATOM 179 C C5 . DA A 1 9 ? 14.360 -10.040 -18.684 1.00 82.88 ? 9 DA A C5 1
ATOM 180 C C6 . DA A 1 9 ? 14.576 -10.319 -17.325 1.00 79.43 ? 9 DA A C6 1
ATOM 181 N N6 . DA A 1 9 ? 15.708 -10.839 -16.846 1.00 79.64 ? 9 DA A N6 1
ATOM 182 N N1 . DA A 1 9 ? 13.578 -10.034 -16.458 1.00 76.71 ? 9 DA A N1 1
ATOM 183 C C2 . DA A 1 9 ? 12.438 -9.520 -16.939 1.00 77.82 ? 9 DA A C2 1
ATOM 184 N N3 . DA A 1 9 ? 12.111 -9.226 -18.194 1.00 79.80 ? 9 DA A N3 1
ATOM 185 C C4 . DA A 1 9 ? 13.127 -9.512 -19.027 1.00 84.52 ? 9 DA A C4 1
ATOM 186 P P . DG A 1 10 ? 10.364 -5.998 -23.903 1.00 124.02 ? 10 DG A P 1
ATOM 187 O OP1 . DG A 1 10 ? 9.090 -5.616 -24.579 1.00 131.02 ? 10 DG A OP1 1
ATOM 188 O OP2 . DG A 1 10 ? 11.654 -5.905 -24.657 1.00 124.03 ? 10 DG A OP2 1
ATOM 189 O "O5'" . DG A 1 10 ? 10.464 -5.185 -22.533 1.00 115.90 ? 10 DG A "O5'" 1
ATOM 190 C "C5'" . DG A 1 10 ? 9.425 -5.317 -21.545 1.00 108.46 ? 10 DG A "C5'" 1
ATOM 191 C "C4'" . DG A 1 10 ? 9.873 -4.725 -20.232 1.00 102.64 ? 10 DG A "C4'" 1
ATOM 192 O "O4'" . DG A 1 10 ? 10.932 -5.531 -19.656 1.00 97.08 ? 10 DG A "O4'" 1
ATOM 193 C "C3'" . DG A 1 10 ? 10.433 -3.305 -20.335 1.00 103.74 ? 10 DG A "C3'" 1
ATOM 194 O "O3'" . DG A 1 10 ? 9.942 -2.522 -19.239 1.00 106.03 ? 10 DG A "O3'" 1
ATOM 195 C "C2'" . DG A 1 10 ? 11.930 -3.520 -20.244 1.00 98.73 ? 10 DG A "C2'" 1
ATOM 196 C "C1'" . DG A 1 10 ? 11.984 -4.670 -19.263 1.00 92.44 ? 10 DG A "C1'" 1
ATOM 197 N N9 . DG A 1 10 ? 13.227 -5.429 -19.278 1.00 86.41 ? 10 DG A N9 1
ATOM 198 C C8 . DG A 1 10 ? 14.022 -5.729 -20.360 1.00 87.21 ? 10 DG A C8 1
ATOM 199 N N7 . DG A 1 10 ? 15.089 -6.410 -20.037 1.00 85.99 ? 10 DG A N7 1
ATOM 200 C C5 . DG A 1 10 ? 15.006 -6.541 -18.656 1.00 82.49 ? 10 DG A C5 1
ATOM 201 C C6 . DG A 1 10 ? 15.887 -7.173 -17.734 1.00 82.10 ? 10 DG A C6 1
ATOM 202 O O6 . DG A 1 10 ? 16.966 -7.742 -17.958 1.00 86.47 ? 10 DG A O6 1
ATOM 203 N N1 . DG A 1 10 ? 15.409 -7.083 -16.431 1.00 78.06 ? 10 DG A N1 1
ATOM 204 C C2 . DG A 1 10 ? 14.243 -6.460 -16.058 1.00 79.26 ? 10 DG A C2 1
ATOM 205 N N2 . DG A 1 10 ? 13.956 -6.474 -14.747 1.00 79.01 ? 10 DG A N2 1
ATOM 206 N N3 . DG A 1 10 ? 13.428 -5.850 -16.903 1.00 79.22 ? 10 DG A N3 1
ATOM 207 C C4 . DG A 1 10 ? 13.865 -5.935 -18.175 1.00 81.89 ? 10 DG A C4 1
ATOM 208 P P . DG A 1 11 ? 10.295 -0.956 -19.127 1.00 113.12 ? 11 DG A P 1
ATOM 209 O OP1 . DG A 1 11 ? 9.185 -0.270 -18.413 1.00 116.27 ? 11 DG A OP1 1
ATOM 210 O OP2 . DG A 1 11 ? 10.759 -0.463 -20.460 1.00 118.20 ? 11 DG A OP2 1
ATOM 211 O "O5'" . DG A 1 11 ? 11.497 -0.950 -18.093 1.00 106.34 ? 11 DG A "O5'" 1
ATOM 212 C "C5'" . DG A 1 11 ? 11.265 -1.320 -16.731 1.00 99.11 ? 11 DG A "C5'" 1
ATOM 213 C "C4'" . DG A 1 11 ? 12.569 -1.160 -15.999 1.00 94.63 ? 11 DG A "C4'" 1
ATOM 214 O "O4'" . DG A 1 11 ? 13.526 -2.024 -16.639 1.00 89.68 ? 11 DG A "O4'" 1
ATOM 215 C "C3'" . DG A 1 11 ? 13.118 0.265 -16.067 1.00 97.19 ? 11 DG A "C3'" 1
ATOM 216 O "O3'" . DG A 1 11 ? 12.979 0.764 -14.733 1.00 99.68 ? 11 DG A "O3'" 1
ATOM 217 C "C2'" . DG A 1 11 ? 14.505 0.133 -16.670 1.00 95.20 ? 11 DG A "C2'" 1
ATOM 218 C "C1'" . DG A 1 11 ? 14.696 -1.334 -16.993 1.00 89.62 ? 11 DG A "C1'" 1
ATOM 219 N N9 . DG A 1 11 ? 14.986 -1.643 -18.383 1.00 90.31 ? 11 DG A N9 1
ATOM 220 C C8 . DG A 1 11 ? 14.449 -1.089 -19.521 1.00 92.76 ? 11 DG A C8 1
ATOM 221 N N7 . DG A 1 11 ? 14.931 -1.608 -20.619 1.00 92.17 ? 11 DG A N7 1
ATOM 222 C C5 . DG A 1 11 ? 15.846 -2.555 -20.178 1.00 91.29 ? 11 DG A C5 1
ATOM 223 C C6 . DG A 1 11 ? 16.692 -3.431 -20.909 1.00 91.90 ? 11 DG A C6 1
ATOM 224 O O6 . DG A 1 11 ? 16.815 -3.537 -22.135 1.00 95.68 ? 11 DG A O6 1
ATOM 225 N N1 . DG A 1 11 ? 17.469 -4.218 -20.062 1.00 89.92 ? 11 DG A N1 1
ATOM 226 C C2 . DG A 1 11 ? 17.440 -4.167 -18.686 1.00 90.59 ? 11 DG A C2 1
ATOM 227 N N2 . DG A 1 11 ? 18.257 -5.012 -18.036 1.00 90.82 ? 11 DG A N2 1
ATOM 228 N N3 . DG A 1 11 ? 16.656 -3.358 -17.996 1.00 87.73 ? 11 DG A N3 1
ATOM 229 C C4 . DG A 1 11 ? 15.886 -2.591 -18.800 1.00 90.32 ? 11 DG A C4 1
ATOM 230 P P . DA A 1 12 ? 13.949 1.851 -14.107 1.00 106.22 ? 12 DA A P 1
ATOM 231 O OP1 . DA A 1 12 ? 13.083 2.864 -13.474 1.00 113.26 ? 12 DA A OP1 1
ATOM 232 O OP2 . DA A 1 12 ? 14.963 2.316 -15.127 1.00 110.02 ? 12 DA A OP2 1
ATOM 233 O "O5'" . DA A 1 12 ? 14.627 1.010 -12.942 1.00 99.17 ? 12 DA A "O5'" 1
ATOM 234 C "C5'" . DA A 1 12 ? 13.801 0.348 -11.985 1.00 97.16 ? 12 DA A "C5'" 1
ATOM 235 C "C4'" . DA A 1 12 ? 14.667 -0.511 -11.099 1.00 95.90 ? 12 DA A "C4'" 1
ATOM 236 O "O4'" . DA A 1 12 ? 15.583 -1.247 -11.937 1.00 92.85 ? 12 DA A "O4'" 1
ATOM 237 C "C3'" . DA A 1 12 ? 15.537 0.279 -10.122 1.00 102.33 ? 12 DA A "C3'" 1
ATOM 238 O "O3'" . DA A 1 12 ? 15.583 -0.395 -8.851 1.00 112.25 ? 12 DA A "O3'" 1
ATOM 239 C "C2'" . DA A 1 12 ? 16.880 0.345 -10.832 1.00 100.15 ? 12 DA A "C2'" 1
ATOM 240 C "C1'" . DA A 1 12 ? 16.917 -0.999 -11.523 1.00 92.09 ? 12 DA A "C1'" 1
ATOM 241 N N9 . DA A 1 12 ? 17.784 -1.137 -12.694 1.00 88.15 ? 12 DA A N9 1
ATOM 242 C C8 . DA A 1 12 ? 17.443 -1.034 -14.021 1.00 86.50 ? 12 DA A C8 1
ATOM 243 N N7 . DA A 1 12 ? 18.434 -1.289 -14.842 1.00 85.55 ? 12 DA A N7 1
ATOM 244 C C5 . DA A 1 12 ? 19.488 -1.618 -14.002 1.00 85.02 ? 12 DA A C5 1
ATOM 245 C C6 . DA A 1 12 ? 20.815 -1.998 -14.257 1.00 87.97 ? 12 DA A C6 1
ATOM 246 N N6 . DA A 1 12 ? 21.333 -2.100 -15.479 1.00 91.95 ? 12 DA A N6 1
ATOM 247 N N1 . DA A 1 12 ? 21.622 -2.212 -13.196 1.00 89.96 ? 12 DA A N1 1
ATOM 248 C C2 . DA A 1 12 ? 21.103 -2.103 -11.963 1.00 90.01 ? 12 DA A C2 1
ATOM 249 N N3 . DA A 1 12 ? 19.864 -1.775 -11.597 1.00 86.36 ? 12 DA A N3 1
ATOM 250 C C4 . DA A 1 12 ? 19.100 -1.536 -12.676 1.00 86.41 ? 12 DA A C4 1
ATOM 251 P P . DG A 1 13 ? 15.383 0.424 -7.447 1.00 124.10 ? 13 DG A P 1
ATOM 252 O OP1 . DG A 1 13 ? 15.687 -0.522 -6.332 1.00 122.49 ? 13 DG A OP1 1
ATOM 253 O OP2 . DG A 1 13 ? 14.062 1.118 -7.490 1.00 124.83 ? 13 DG A OP2 1
ATOM 254 O "O5'" . DG A 1 13 ? 16.507 1.556 -7.497 1.00 121.52 ? 13 DG A "O5'" 1
HETATM 255 MG MG . MG B 2 . ? 8.492 -27.024 1.127 1.00 99.20 ? 101 MG A MG 1
HETATM 256 O O . HOH C 3 . ? 10.319 -27.279 0.661 1.00 90.57 ? 201 HOH A O 1
#
loop_
_atom_site_anisotrop.id
_atom_site_anisotrop.type_symbol
_atom_site_anisotrop.pdbx_label_atom_id
_atom_site_anisotrop.pdbx_label_alt_id
_atom_site_anisotrop.pdbx_label_comp_id
_atom_site_anisotrop.pdbx_label_asym_id
_atom_site_anisotrop.pdbx_label_seq_id
_atom_site_anisotrop.pdbx_PDB_ins_code
_atom_site_anisotrop.U[1][1]
_atom_site_anisotrop.U[2][2]
_atom_site_anisotrop.U[3][3]
_atom_site_anisotrop.U[1][2]
_atom_site_anisotrop.U[1][3]
_atom_site_anisotrop.U[2][3]
_atom_site_anisotrop.pdbx_auth_seq_id
_atom_site_anisotrop.pdbx_auth_comp_id
_atom_site_anisotrop.pdbx_auth_asym_id
_atom_site_anisotrop.pdbx_auth_atom_id
1 O "O5'" . DG A 1 ? 1.2398 1.5538 1.2072 -0.0750 0.0442 0.0773 1 DG A "O5'"
2 C "C5'" . DG A 1 ? 1.2208 1.5444 1.1931 -0.1150 0.0665 0.0793 1 DG A "C5'"
3 C "C4'" . DG A 1 ? 1.1561 1.4792 1.1508 -0.1319 0.0532 0.0812 1 DG A "C4'"
4 O "O4'" . DG A 1 ? 1.0606 1.4673 1.1403 -0.1264 0.0355 0.0747 1 DG A "O4'"
5 C "C3'" . DG A 1 ? 1.1560 1.4147 1.1191 -0.1040 0.0379 0.0882 1 DG A "C3'"
6 O "O3'" . DG A 1 ? 1.1837 1.3949 1.1188 -0.1347 0.0471 0.0907 1 DG A "O3'"
7 C "C2'" . DG A 1 ? 1.0637 1.3795 1.0932 -0.0745 0.0098 0.0791 1 DG A "C2'"
8 C "C1'" . DG A 1 ? 0.9906 1.3807 1.0830 -0.0986 0.0099 0.0721 1 DG A "C1'"
9 N N9 . DG A 1 ? 0.8946 1.3419 1.0470 -0.0704 -0.0018 0.0641 1 DG A N9
10 C C8 . DG A 1 ? 0.8519 1.3365 1.0572 -0.0622 -0.0205 0.0625 1 DG A C8
11 N N7 . DG A 1 ? 0.8067 1.3164 1.0435 -0.0333 -0.0198 0.0554 1 DG A N7
12 C C5 . DG A 1 ? 0.8210 1.3085 1.0199 -0.0262 0.0000 0.0495 1 DG A C5
13 C C6 . DG A 1 ? 0.8466 1.3269 1.0362 -0.0049 0.0161 0.0374 1 DG A C6
14 O O6 . DG A 1 ? 0.8261 1.3130 1.0410 0.0161 0.0194 0.0298 1 DG A O6
15 N N1 . DG A 1 ? 0.9034 1.3503 1.0332 -0.0130 0.0340 0.0343 1 DG A N1
16 C C2 . DG A 1 ? 0.9612 1.3843 1.0490 -0.0334 0.0361 0.0447 1 DG A C2
17 N N2 . DG A 1 ? 1.0478 1.4355 1.0721 -0.0389 0.0539 0.0428 1 DG A N2
18 N N3 . DG A 1 ? 0.9265 1.3464 1.0202 -0.0500 0.0257 0.0561 1 DG A N3
19 C C4 . DG A 1 ? 0.8750 1.3281 1.0236 -0.0477 0.0082 0.0563 1 DG A C4
20 P P . DG A 2 ? 1.2492 1.3720 1.1395 -0.1078 0.0510 0.1018 2 DG A P
21 O OP1 . DG A 2 ? 1.3424 1.3925 1.1757 -0.1555 0.0759 0.0993 2 DG A OP1
22 O OP2 . DG A 2 ? 1.2725 1.3558 1.1241 -0.0647 0.0552 0.1211 2 DG A OP2
23 O "O5'" . DG A 2 ? 1.0988 1.2776 1.0604 -0.0809 0.0201 0.0941 2 DG A "O5'"
24 C "C5'" . DG A 2 ? 1.0049 1.2249 1.0071 -0.1101 0.0074 0.0819 2 DG A "C5'"
25 C "C4'" . DG A 2 ? 0.9370 1.1985 0.9958 -0.0757 -0.0186 0.0767 2 DG A "C4'"
26 O "O4'" . DG A 2 ? 0.8621 1.1910 0.9670 -0.0553 -0.0335 0.0710 2 DG A "O4'"
27 C "C3'" . DG A 2 ? 0.9652 1.1812 1.0073 -0.0353 -0.0159 0.0872 2 DG A "C3'"
28 O "O3'" . DG A 2 ? 0.9696 1.1857 1.0367 -0.0318 -0.0241 0.0812 2 DG A "O3'"
29 C "C2'" . DG A 2 ? 0.9009 1.1676 0.9692 -0.0044 -0.0347 0.0895 2 DG A "C2'"
30 C "C1'" . DG A 2 ? 0.8199 1.1489 0.9330 -0.0196 -0.0475 0.0719 2 DG A "C1'"
31 N N9 . DG A 2 ? 0.8164 1.1751 0.9303 -0.0085 -0.0511 0.0674 2 DG A N9
32 C C8 . DG A 2 ? 0.8788 1.2167 0.9467 -0.0034 -0.0433 0.0766 2 DG A C8
33 N N7 . DG A 2 ? 0.9016 1.2631 0.9663 -0.0007 -0.0461 0.0665 2 DG A N7
34 C C5 . DG A 2 ? 0.8385 1.2328 0.9515 0.0012 -0.0525 0.0506 2 DG A C5
35 C C6 . DG A 2 ? 0.8581 1.2664 0.9767 0.0055 -0.0482 0.0339 2 DG A C6
36 O O6 . DG A 2 ? 0.9338 1.3278 1.0104 0.0027 -0.0381 0.0264 2 DG A O6
37 N N1 . DG A 2 ? 0.8168 1.2439 0.9830 0.0121 -0.0525 0.0261 2 DG A N1
38 C C2 . DG A 2 ? 0.7661 1.2038 0.9675 0.0095 -0.0647 0.0330 2 DG A C2
39 N N2 . DG A 2 ? 0.7954 1.2479 1.0330 0.0169 -0.0689 0.0277 2 DG A N2
40 N N3 . DG A 2 ? 0.7055 1.1274 0.8954 -0.0008 -0.0678 0.0447 2 DG A N3
41 C C4 . DG A 2 ? 0.7676 1.1657 0.9142 -0.0024 -0.0589 0.0530 2 DG A C4
42 P P . DA A 3 ? 1.0688 1.1969 1.0906 -0.0255 0.0046 0.0900 3 DA A P
43 O OP1 . DA A 3 ? 1.1781 1.2209 1.1231 -0.0393 0.0395 0.1005 3 DA A OP1
44 O OP2 . DA A 3 ? 1.1274 1.2791 1.1878 0.0237 -0.0021 0.1019 3 DA A OP2
45 O "O5'" . DA A 3 ? 1.0599 1.1804 1.0780 -0.0692 0.0005 0.0737 3 DA A "O5'"
46 C "C5'" . DA A 3 ? 1.0238 1.2229 1.0861 -0.0958 -0.0296 0.0638 3 DA A "C5'"
47 C "C4'" . DA A 3 ? 1.0070 1.2154 1.0863 -0.1086 -0.0445 0.0561 3 DA A "C4'"
48 O "O4'" . DA A 3 ? 0.9315 1.2111 1.0774 -0.0783 -0.0705 0.0527 3 DA A "O4'"
49 C "C3'" . DA A 3 ? 1.0601 1.1941 1.1068 -0.0975 -0.0223 0.0546 3 DA A "C3'"
50 O "O3'" . DA A 3 ? 1.1274 1.2573 1.1683 -0.1265 -0.0336 0.0463 3 DA A "O3'"
51 C "C2'" . DA A 3 ? 0.9804 1.1610 1.0854 -0.0447 -0.0332 0.0581 3 DA A "C2'"
52 C "C1'" . DA A 3 ? 0.8824 1.1432 1.0387 -0.0488 -0.0673 0.0504 3 DA A "C1'"
53 N N9 . DA A 3 ? 0.8342 1.1455 1.0298 -0.0168 -0.0810 0.0499 3 DA A N9
54 C C8 . DA A 3 ? 0.8388 1.1634 1.0291 -0.0017 -0.0787 0.0567 3 DA A C8
55 N N7 . DA A 3 ? 0.8090 1.1751 1.0233 0.0142 -0.0941 0.0519 3 DA A N7
56 C C5 . DA A 3 ? 0.7879 1.1658 1.0271 0.0107 -0.1048 0.0407 3 DA A C5
57 C C6 . DA A 3 ? 0.8102 1.2125 1.0670 0.0150 -0.1176 0.0288 3 DA A C6
58 N N6 . DA A 3 ? 0.8580 1.2805 1.1065 0.0192 -0.1239 0.0248 3 DA A N6
59 N N1 . DA A 3 ? 0.7964 1.1903 1.0652 0.0082 -0.1216 0.0206 3 DA A N1
60 C C2 . DA A 3 ? 0.8266 1.1956 1.0900 -0.0034 -0.1167 0.0248 3 DA A C2
61 N N3 . DA A 3 ? 0.8041 1.1480 1.0453 -0.0148 -0.1056 0.0337 3 DA A N3
62 C C4 . DA A 3 ? 0.8015 1.1493 1.0323 -0.0060 -0.0984 0.0409 3 DA A C4
63 P P . DT A 4 ? 1.2141 1.2783 1.1715 -0.1973 -0.0228 0.0416 4 DT A P
64 O OP1 . DT A 4 ? 1.1706 1.2273 1.1240 -0.2110 -0.0345 0.0357 4 DT A OP1
65 O OP2 . DT A 4 ? 1.1897 1.3105 1.1499 -0.2390 -0.0423 0.0473 4 DT A OP2
66 O "O5'" . DT A 4 ? 1.2897 1.2243 1.1612 -0.1965 0.0331 0.0406 4 DT A "O5'"
67 C "C5'" . DT A 4 ? 1.2889 1.1726 1.1642 -0.1475 0.0645 0.0430 4 DT A "C5'"
68 C "C4'" . DT A 4 ? 1.4050 1.1415 1.1777 -0.1579 0.1279 0.0429 4 DT A "C4'"
69 O "O4'" . DT A 4 ? 1.4600 1.1231 1.1309 -0.2415 0.1363 0.0290 4 DT A "O4'"
70 C "C3'" . DT A 4 ? 1.4590 1.1424 1.2285 -0.1275 0.1630 0.0420 4 DT A "C3'"
71 O "O3'" . DT A 4 ? 1.6098 1.2061 1.3518 -0.0753 0.2248 0.0588 4 DT A "O3'"
72 C "C2'" . DT A 4 ? 1.5022 1.1105 1.1817 -0.2017 0.1703 0.0220 4 DT A "C2'"
73 C "C1'" . DT A 4 ? 1.5182 1.0846 1.1157 -0.2701 0.1678 0.0166 4 DT A "C1'"
74 N N1 . DT A 4 ? 1.4598 1.0670 1.0319 -0.3477 0.1234 0.0062 4 DT A N1
75 C C2 . DT A 4 ? 1.5455 1.0530 1.0194 -0.4000 0.1474 -0.0077 4 DT A C2
76 O O2 . DT A 4 ? 1.6332 1.0086 1.0362 -0.3845 0.2123 -0.0149 4 DT A O2
77 N N3 . DT A 4 ? 1.5364 1.1023 0.9930 -0.4715 0.0957 -0.0094 4 DT A N3
78 C C4 . DT A 4 ? 1.4382 1.1555 0.9764 -0.4865 0.0287 0.0051 4 DT A C4
79 O O4 . DT A 4 ? 1.4770 1.2442 0.9953 -0.5484 -0.0139 0.0111 4 DT A O4
80 C C5 . DT A 4 ? 1.3242 1.1309 0.9653 -0.4243 0.0165 0.0160 4 DT A C5
81 C C7 . DT A 4 ? 1.2402 1.2033 0.9741 -0.4288 -0.0419 0.0326 4 DT A C7
82 C C6 . DT A 4 ? 1.3481 1.0947 0.9964 -0.3624 0.0610 0.0144 4 DT A C6
83 P P . DA A 5 ? 1.5830 1.2456 1.4243 0.0074 0.2345 0.0804 5 DA A P
84 O OP1 . DA A 5 ? 1.6302 1.3054 1.4969 0.0670 0.2483 0.1119 5 DA A OP1
85 O OP2 . DA A 5 ? 1.4135 1.2052 1.3453 0.0021 0.1753 0.0700 5 DA A OP2
86 O "O5'" . DA A 5 ? 1.6936 1.2293 1.4708 0.0152 0.3090 0.0784 5 DA A "O5'"
87 C "C5'" . DA A 5 ? 1.8350 1.2171 1.4741 -0.0517 0.3515 0.0547 5 DA A "C5'"
88 C "C4'" . DA A 5 ? 1.8924 1.2259 1.5121 -0.0584 0.3857 0.0422 5 DA A "C4'"
89 O "O4'" . DA A 5 ? 1.8727 1.2082 1.4424 -0.1426 0.3434 0.0140 5 DA A "O4'"
90 C "C3'" . DA A 5 ? 1.7885 1.2469 1.5424 0.0057 0.3716 0.0576 5 DA A "C3'"
91 O "O3'" . DA A 5 ? 1.9384 1.2939 1.6481 0.0208 0.4483 0.0560 5 DA A "O3'"
92 C "C2'" . DA A 5 ? 1.6502 1.2216 1.4528 -0.0401 0.2902 0.0386 5 DA A "C2'"
93 C "C1'" . DA A 5 ? 1.7214 1.1873 1.3957 -0.1278 0.2914 0.0127 5 DA A "C1'"
94 N N9 . DA A 5 ? 1.5795 1.1285 1.2656 -0.1817 0.2149 0.0033 5 DA A N9
95 C C8 . DA A 5 ? 1.4229 1.1001 1.1970 -0.1653 0.1545 0.0121 5 DA A C8
96 N N7 . DA A 5 ? 1.3356 1.0603 1.1001 -0.2179 0.1031 0.0060 5 DA A N7
97 C C5 . DA A 5 ? 1.4180 1.0456 1.0781 -0.2791 0.1229 -0.0069 5 DA A C5
98 C C6 . DA A 5 ? 1.4083 1.0407 1.0112 -0.3538 0.0848 -0.0114 5 DA A C6
99 N N6 . DA A 5 ? 1.3309 1.0815 0.9911 -0.3695 0.0204 0.0005 5 DA A N6
100 N N1 . DA A 5 ? 1.5359 1.0499 1.0197 -0.4110 0.1168 -0.0248 5 DA A N1
101 C C2 . DA A 5 ? 1.6783 1.0673 1.1060 -0.3881 0.1924 -0.0350 5 DA A C2
102 N N3 . DA A 5 ? 1.6832 1.0612 1.1680 -0.3101 0.2386 -0.0276 5 DA A N3
103 C C4 . DA A 5 ? 1.5607 1.0688 1.1633 -0.2605 0.1949 -0.0124 5 DA A C4
104 P P . DC A 6 ? 1.8755 1.3292 1.7041 0.0805 0.4623 0.0724 6 DC A P
105 O OP1 . DC A 6 ? 2.0140 1.3613 1.8158 0.1409 0.5650 0.0952 6 DC A OP1
106 O OP2 . DC A 6 ? 1.7475 1.3897 1.7151 0.1145 0.3881 0.0907 6 DC A OP2
107 O "O5'" . DC A 6 ? 1.7944 1.2335 1.5832 0.0116 0.4409 0.0381 6 DC A "O5'"
108 C "C5'" . DC A 6 ? 1.9371 1.2058 1.5718 -0.0541 0.4869 0.0113 6 DC A "C5'"
109 C "C4'" . DC A 6 ? 1.8808 1.1735 1.4880 -0.1242 0.4347 -0.0142 6 DC A "C4'"
110 O "O4'" . DC A 6 ? 1.7679 1.1377 1.3839 -0.1669 0.3492 -0.0187 6 DC A "O4'"
111 C "C3'" . DC A 6 ? 1.7917 1.2010 1.5104 -0.0962 0.4128 -0.0109 6 DC A "C3'"
112 O "O3'" . DC A 6 ? 1.9564 1.2710 1.6132 -0.1142 0.4740 -0.0245 6 DC A "O3'"
113 C "C2'" . DC A 6 ? 1.6641 1.1645 1.4047 -0.1421 0.3199 -0.0213 6 DC A "C2'"
114 C "C1'" . DC A 6 ? 1.6590 1.0990 1.3039 -0.1974 0.2955 -0.0283 6 DC A "C1'"
115 N N1 . DC A 6 ? 1.4766 1.0374 1.1858 -0.2042 0.2133 -0.0220 6 DC A N1
116 C C2 . DC A 6 ? 1.4491 1.0187 1.1082 -0.2683 0.1606 -0.0285 6 DC A C2
117 O O2 . DC A 6 ? 1.5313 1.0065 1.0845 -0.3252 0.1781 -0.0402 6 DC A O2
118 N N3 . DC A 6 ? 1.3342 1.0158 1.0593 -0.2659 0.0944 -0.0185 6 DC A N3
119 C C4 . DC A 6 ? 1.2862 1.0541 1.1079 -0.2107 0.0810 -0.0086 6 DC A C4
120 N N4 . DC A 6 ? 1.2093 1.0729 1.0852 -0.2095 0.0253 -0.0005 6 DC A N4
121 C C5 . DC A 6 ? 1.2630 1.0253 1.1289 -0.1531 0.1259 -0.0025 6 DC A C5
122 C C6 . DC A 6 ? 1.3528 1.0182 1.1680 -0.1480 0.1903 -0.0065 6 DC A C6
123 P P . DG A 7 ? 1.9174 1.3295 1.6726 -0.0931 0.4705 -0.0231 7 DG A P
124 O OP1 . DG A 7 ? 2.0290 1.3680 1.7779 -0.0542 0.5721 -0.0162 7 DG A OP1
125 O OP2 . DG A 7 ? 1.7284 1.3206 1.6270 -0.0572 0.3994 -0.0069 7 DG A OP2
126 O "O5'" . DG A 7 ? 1.9303 1.2913 1.5911 -0.1756 0.4323 -0.0495 7 DG A "O5'"
127 C "C5'" . DG A 7 ? 2.0224 1.2357 1.5185 -0.2491 0.4441 -0.0681 7 DG A "C5'"
128 C "C4'" . DG A 7 ? 1.9572 1.1952 1.4121 -0.3138 0.3717 -0.0776 7 DG A "C4'"
129 O "O4'" . DG A 7 ? 1.7961 1.1483 1.3140 -0.3129 0.2860 -0.0657 7 DG A "O4'"
130 C "C3'" . DG A 7 ? 1.9040 1.2037 1.4227 -0.3022 0.3625 -0.0794 7 DG A "C3'"
131 O "O3'" . DG A 7 ? 2.0381 1.2657 1.4436 -0.3736 0.3408 -0.0907 7 DG A "O3'"
132 C "C2'" . DG A 7 ? 1.6834 1.1449 1.3378 -0.2634 0.2894 -0.0650 7 DG A "C2'"
133 C "C1'" . DG A 7 ? 1.6143 1.0812 1.2273 -0.2934 0.2334 -0.0599 7 DG A "C1'"
134 N N9 . DG A 7 ? 1.4069 0.9954 1.1276 -0.2509 0.1853 -0.0461 7 DG A N9
135 C C8 . DG A 7 ? 1.3161 0.9753 1.1373 -0.1889 0.2021 -0.0360 7 DG A C8
136 N N7 . DG A 7 ? 1.1927 0.9441 1.0782 -0.1701 0.1497 -0.0265 7 DG A N7
137 C C5 . DG A 7 ? 1.1955 0.9427 1.0313 -0.2160 0.0993 -0.0284 7 DG A C5
138 C C6 . DG A 7 ? 1.1280 0.9537 1.0013 -0.2158 0.0396 -0.0186 7 DG A C6
139 O O6 . DG A 7 ? 1.0791 0.9820 1.0264 -0.1794 0.0203 -0.0115 7 DG A O6
140 N N1 . DG A 7 ? 1.1357 0.9459 0.9492 -0.2640 0.0030 -0.0141 7 DG A N1
141 C C2 . DG A 7 ? 1.2567 0.9808 0.9730 -0.3141 0.0164 -0.0198 7 DG A C2
142 N N2 . DG A 7 ? 1.2917 1.0300 0.9638 -0.3573 -0.0321 -0.0059 7 DG A N2
143 N N3 . DG A 7 ? 1.3314 0.9653 0.9969 -0.3207 0.0748 -0.0347 7 DG A N3
144 C C4 . DG A 7 ? 1.3087 0.9621 1.0440 -0.2669 0.1161 -0.0378 7 DG A C4
145 P P . DT A 8 ? 2.0460 1.2882 1.4670 -0.3815 0.3415 -0.0961 8 DT A P
146 O OP1 . DT A 8 ? 2.2367 1.3312 1.5385 -0.4169 0.4228 -0.1134 8 DT A OP1
147 O OP2 . DT A 8 ? 1.8261 1.2060 1.4070 -0.3178 0.3308 -0.0869 8 DT A OP2
148 O "O5'" . DT A 8 ? 2.0279 1.2877 1.3940 -0.4338 0.2551 -0.0883 8 DT A "O5'"
149 C "C5'" . DT A 8 ? 1.9915 1.2639 1.3133 -0.4670 0.1971 -0.0767 8 DT A "C5'"
150 C "C4'" . DT A 8 ? 1.8614 1.2331 1.2330 -0.4648 0.1126 -0.0558 8 DT A "C4'"
151 O "O4'" . DT A 8 ? 1.6703 1.1628 1.1673 -0.4105 0.0765 -0.0443 8 DT A "O4'"
152 C "C3'" . DT A 8 ? 1.8436 1.2242 1.2405 -0.4519 0.1125 -0.0567 8 DT A "C3'"
153 O "O3'" . DT A 8 ? 1.9387 1.3165 1.2732 -0.4892 0.0527 -0.0361 8 DT A "O3'"
154 C "C2'" . DT A 8 ? 1.6469 1.1426 1.1912 -0.3852 0.1010 -0.0543 8 DT A "C2'"
155 C "C1'" . DT A 8 ? 1.5503 1.1158 1.1330 -0.3723 0.0524 -0.0389 8 DT A "C1'"
156 N N1 . DT A 8 ? 1.4136 1.0722 1.1161 -0.3148 0.0513 -0.0389 8 DT A N1
157 C C2 . DT A 8 ? 1.3197 1.0624 1.0791 -0.2938 -0.0023 -0.0233 8 DT A C2
158 O O2 . DT A 8 ? 1.3278 1.0839 1.0574 -0.3140 -0.0483 -0.0053 8 DT A O2
159 N N3 . DT A 8 ? 1.1720 0.9883 1.0263 -0.2471 0.0012 -0.0255 8 DT A N3
160 C C4 . DT A 8 ? 1.1432 0.9721 1.0472 -0.2186 0.0450 -0.0354 8 DT A C4
161 O O4 . DT A 8 ? 1.1155 1.0192 1.0975 -0.1818 0.0366 -0.0315 8 DT A O4
162 C C5 . DT A 8 ? 1.2335 0.9866 1.0901 -0.2350 0.1007 -0.0462 8 DT A C5
163 C C7 . DT A 8 ? 1.2347 1.0156 1.1575 -0.1974 0.1533 -0.0478 8 DT A C7
164 C C6 . DT A 8 ? 1.3569 1.0221 1.1122 -0.2827 0.1044 -0.0504 8 DT A C6
165 P P . DA A 9 ? 1.9481 1.3275 1.2884 -0.4808 0.0357 -0.0279 9 DA A P
166 O OP1 . DA A 9 ? 2.0576 1.3598 1.2632 -0.5427 0.0109 -0.0123 9 DA A OP1
167 O OP2 . DA A 9 ? 1.9052 1.2758 1.3004 -0.4532 0.0965 -0.0525 9 DA A OP2
168 O "O5'" . DA A 9 ? 1.7819 1.2774 1.2239 -0.4330 -0.0272 -0.0028 9 DA A "O5'"
169 C "C5'" . DA A 9 ? 1.7680 1.3185 1.2061 -0.4431 -0.0841 0.0254 9 DA A "C5'"
170 C "C4'" . DA A 9 ? 1.6822 1.3198 1.2051 -0.3921 -0.1296 0.0519 9 DA A "C4'"
171 O "O4'" . DA A 9 ? 1.5736 1.2759 1.2054 -0.3413 -0.1135 0.0354 9 DA A "O4'"
172 C "C3'" . DA A 9 ? 1.7205 1.3137 1.2214 -0.3801 -0.1268 0.0581 9 DA A "C3'"
173 O "O3'" . DA A 9 ? 1.7506 1.3905 1.2656 -0.3552 -0.1791 0.1013 9 DA A "O3'"
174 C "C2'" . DA A 9 ? 1.6283 1.2359 1.2085 -0.3427 -0.0860 0.0272 9 DA A "C2'"
175 C "C1'" . DA A 9 ? 1.4828 1.1795 1.1543 -0.3101 -0.0952 0.0241 9 DA A "C1'"
176 N N9 . DA A 9 ? 1.3455 1.0621 1.0774 -0.2936 -0.0528 -0.0059 9 DA A N9
177 C C8 . DA A 9 ? 1.3502 1.0237 1.0678 -0.3094 -0.0007 -0.0296 9 DA A C8
178 N N7 . DA A 9 ? 1.2591 0.9893 1.0582 -0.2805 0.0231 -0.0426 9 DA A N7
179 C C5 . DA A 9 ? 1.1627 0.9654 1.0207 -0.2496 -0.0156 -0.0313 9 DA A C5
180 C C6 . DA A 9 ? 1.0647 0.9456 1.0077 -0.2149 -0.0174 -0.0349 9 DA A C6
181 N N6 . DA A 9 ? 1.0391 0.9533 1.0336 -0.2017 0.0164 -0.0455 9 DA A N6
182 N N1 . DA A 9 ? 1.0036 0.9329 0.9781 -0.1926 -0.0545 -0.0228 9 DA A N1
183 C C2 . DA A 9 ? 1.0353 0.9488 0.9728 -0.1983 -0.0869 -0.0036 9 DA A C2
184 N N3 . DA A 9 ? 1.1038 0.9593 0.9690 -0.2270 -0.0951 0.0078 9 DA A N3
185 C C4 . DA A 9 ? 1.1984 0.9934 1.0194 -0.2553 -0.0585 -0.0096 9 DA A C4
186 P P . DG A 10 ? 1.8850 1.4672 1.3602 -0.3388 -0.1820 0.1205 10 DG A P
187 O OP1 . DG A 10 ? 1.9764 1.5870 1.4149 -0.3401 -0.2389 0.1777 10 DG A OP1
188 O OP2 . DG A 10 ? 1.9430 1.4225 1.3470 -0.3764 -0.1329 0.0867 10 DG A OP2
189 O "O5'" . DG A 10 ? 1.7346 1.3608 1.3082 -0.2741 -0.1714 0.1142 10 DG A "O5'"
190 C "C5'" . DG A 10 ? 1.5797 1.3039 1.2374 -0.2310 -0.2006 0.1364 10 DG A "C5'"
191 C "C4'" . DG A 10 ? 1.4784 1.2160 1.2057 -0.1863 -0.1737 0.1136 10 DG A "C4'"
192 O "O4'" . DG A 10 ? 1.3937 1.1419 1.1529 -0.2045 -0.1419 0.0684 10 DG A "O4'"
193 C "C3'" . DG A 10 ? 1.5345 1.1857 1.2213 -0.1714 -0.1488 0.1103 10 DG A "C3'"
194 O "O3'" . DG A 10 ? 1.5412 1.2110 1.2764 -0.1178 -0.1442 0.1196 10 DG A "O3'"
195 C "C2'" . DG A 10 ? 1.4859 1.1006 1.1649 -0.2075 -0.1069 0.0604 10 DG A "C2'"
196 C "C1'" . DG A 10 ? 1.3496 1.0537 1.1090 -0.2009 -0.1079 0.0416 10 DG A "C1'"
197 N N9 . DG A 10 ? 1.2687 0.9747 1.0398 -0.2312 -0.0751 0.0064 10 DG A N9
198 C C8 . DG A 10 ? 1.3163 0.9654 1.0317 -0.2714 -0.0492 -0.0062 10 DG A C8
199 N N7 . DG A 10 ? 1.2780 0.9545 1.0348 -0.2805 -0.0152 -0.0324 10 DG A N7
200 C C5 . DG A 10 ? 1.1794 0.9361 1.0187 -0.2482 -0.0257 -0.0367 10 DG A C5
201 C C6 . DG A 10 ? 1.1262 0.9526 1.0405 -0.2389 -0.0060 -0.0536 10 DG A C6
202 O O6 . DG A 10 ? 1.1706 1.0094 1.1057 -0.2510 0.0292 -0.0660 10 DG A O6
203 N N1 . DG A 10 ? 1.0360 0.9249 1.0050 -0.2093 -0.0291 -0.0504 10 DG A N1
204 C C2 . DG A 10 ? 1.0569 0.9394 1.0152 -0.1875 -0.0584 -0.0350 10 DG A C2
205 N N2 . DG A 10 ? 1.0181 0.9570 1.0271 -0.1623 -0.0695 -0.0368 10 DG A N2
206 N N3 . DG A 10 ? 1.0936 0.9206 0.9957 -0.1879 -0.0736 -0.0151 10 DG A N3
207 C C4 . DG A 10 ? 1.1666 0.9348 1.0100 -0.2204 -0.0599 -0.0163 10 DG A C4
208 P P . DG A 11 ? 1.6834 1.2479 1.3669 -0.0963 -0.1122 0.1190 11 DG A P
209 O OP1 . DG A 11 ? 1.7070 1.2872 1.4236 -0.0305 -0.1156 0.1540 11 DG A OP1
210 O OP2 . DG A 11 ? 1.8102 1.2812 1.3998 -0.1294 -0.1065 0.1268 11 DG A OP2
211 O "O5'" . DG A 11 ? 1.5915 1.1505 1.2985 -0.1189 -0.0758 0.0633 11 DG A "O5'"
212 C "C5'" . DG A 11 ? 1.4520 1.0827 1.2312 -0.0951 -0.0757 0.0499 11 DG A "C5'"
213 C "C4'" . DG A 11 ? 1.3988 1.0174 1.1792 -0.1306 -0.0458 0.0027 11 DG A "C4'"
214 O "O4'" . DG A 11 ? 1.3232 0.9714 1.1130 -0.1740 -0.0441 -0.0159 11 DG A "O4'"
215 C "C3'" . DG A 11 ? 1.4965 0.9988 1.1974 -0.1459 -0.0113 -0.0103 11 DG A "C3'"
216 O "O3'" . DG A 11 ? 1.5275 1.0233 1.2367 -0.1295 0.0051 -0.0252 11 DG A "O3'"
217 C "C2'" . DG A 11 ? 1.4826 0.9727 1.1620 -0.2072 0.0060 -0.0405 11 DG A "C2'"
218 C "C1'" . DG A 11 ? 1.3581 0.9454 1.1015 -0.2161 -0.0136 -0.0408 11 DG A "C1'"
219 N N9 . DG A 11 ? 1.3932 0.9442 1.0939 -0.2428 -0.0104 -0.0341 11 DG A N9
220 C C8 . DG A 11 ? 1.4780 0.9457 1.1008 -0.2418 -0.0166 -0.0075 11 DG A C8
221 N N7 . DG A 11 ? 1.4896 0.9357 1.0769 -0.2775 -0.0090 -0.0109 11 DG A N7
222 C C5 . DG A 11 ? 1.4323 0.9514 1.0850 -0.2962 0.0086 -0.0401 11 DG A C5
223 C C6 . DG A 11 ? 1.4387 0.9636 1.0897 -0.3291 0.0343 -0.0551 11 DG A C6
224 O O6 . DG A 11 ? 1.5333 0.9902 1.1119 -0.3576 0.0469 -0.0510 11 DG A O6
225 N N1 . DG A 11 ? 1.3536 0.9697 1.0934 -0.3255 0.0500 -0.0746 11 DG A N1
226 C C2 . DG A 11 ? 1.3122 1.0053 1.1247 -0.3017 0.0360 -0.0799 11 DG A C2
227 N N2 . DG A 11 ? 1.2584 1.0413 1.1509 -0.2994 0.0501 -0.0911 11 DG A N2
228 N N3 . DG A 11 ? 1.2837 0.9628 1.0868 -0.2792 0.0133 -0.0716 11 DG A N3
229 C C4 . DG A 11 ? 1.3717 0.9624 1.0976 -0.2742 0.0037 -0.0516 11 DG A C4
230 P P . DA A 12 ? 1.6615 1.0710 1.3033 -0.1728 0.0449 -0.0630 12 DA A P
231 O OP1 . DA A 12 ? 1.7986 1.1154 1.3895 -0.1295 0.0708 -0.0510 12 DA A OP1
232 O OP2 . DA A 12 ? 1.7512 1.0962 1.3328 -0.2258 0.0627 -0.0769 12 DA A OP2
233 O "O5'" . DA A 12 ? 1.5107 1.0342 1.2231 -0.2011 0.0336 -0.0930 12 DA A "O5'"
234 C "C5'" . DA A 12 ? 1.4408 1.0373 1.2136 -0.1599 0.0156 -0.0830 12 DA A "C5'"
235 C "C4'" . DA A 12 ? 1.3692 1.0730 1.2014 -0.1935 0.0021 -0.1069 12 DA A "C4'"
236 O "O4'" . DA A 12 ? 1.2987 1.0607 1.1686 -0.2225 -0.0067 -0.1095 12 DA A "O4'"
237 C "C3'" . DA A 12 ? 1.4768 1.1510 1.2604 -0.2459 0.0224 -0.1406 12 DA A "C3'"
238 O "O3'" . DA A 12 ? 1.5568 1.3205 1.3877 -0.2470 0.0054 -0.1482 12 DA A "O3'"
239 C "C2'" . DA A 12 ? 1.4432 1.1370 1.2250 -0.3053 0.0277 -0.1563 12 DA A "C2'"
240 C "C1'" . DA A 12 ? 1.2792 1.0717 1.1483 -0.2803 0.0043 -0.1366 12 DA A "C1'"
241 N N9 . DA A 12 ? 1.2274 1.0224 1.0997 -0.3101 0.0153 -0.1384 12 DA A N9
242 C C8 . DA A 12 ? 1.2420 0.9676 1.0768 -0.2991 0.0225 -0.1241 12 DA A C8
243 N N7 . DA A 12 ? 1.2206 0.9645 1.0653 -0.3337 0.0379 -0.1313 12 DA A N7
244 C C5 . DA A 12 ? 1.1578 1.0065 1.0659 -0.3637 0.0390 -0.1466 12 DA A C5
245 C C6 . DA A 12 ? 1.1502 1.0808 1.1114 -0.4008 0.0555 -0.1540 12 DA A C6
246 N N6 . DA A 12 ? 1.2145 1.1161 1.1631 -0.4170 0.0818 -0.1535 12 DA A N6
247 N N1 . DA A 12 ? 1.1148 1.1623 1.1411 -0.4234 0.0460 -0.1595 12 DA A N1
248 C C2 . DA A 12 ? 1.1099 1.1760 1.1343 -0.4128 0.0216 -0.1615 12 DA A C2
249 N N3 . DA A 12 ? 1.1086 1.0920 1.0805 -0.3784 0.0111 -0.1597 12 DA A N3
250 C C4 . DA A 12 ? 1.1598 1.0417 1.0816 -0.3522 0.0210 -0.1503 12 DA A C4
251 P P . DG A 13 ? 1.7508 1.4529 1.5114 -0.2647 0.0258 -0.1703 13 DG A P
252 O OP1 . DG A 13 ? 1.6713 1.4927 1.4901 -0.2759 -0.0019 -0.1741 13 DG A OP1
253 O OP2 . DG A 13 ? 1.8129 1.4046 1.5254 -0.2064 0.0534 -0.1549 13 DG A OP2
254 O "O5'" . DG A 13 ? 1.7733 1.3996 1.4443 -0.3444 0.0510 -0.2017 13 DG A "O5'"
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 DG 1 1 1 DG DG A . n
A 1 2 DG 2 2 2 DG DG A . n
A 1 3 DA 3 3 3 DA DA A . n
A 1 4 DT 4 4 4 DT DT A . n
A 1 5 DA 5 5 5 DA DA A . n
A 1 6 DC 6 6 6 DC DC A . n
A 1 7 DG 7 7 7 DG DG A . n
A 1 8 DT 8 8 8 DT DT A . n
A 1 9 DA 9 9 9 DA DA A . n
A 1 10 DG 10 10 10 DG DG A . n
A 1 11 DG 11 11 11 DG DG A . n
A 1 12 DA 12 12 12 DA DA A . n
A 1 13 DG 13 13 13 DG DG A . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MG 1 101 1 MG MG A .
C 3 HOH 1 201 1 HOH HOH A .
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1,2
_pdbx_struct_assembly_gen.asym_id_list A,B,C
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 4_545 -x,-y-1,z -1.0000000000 0.0000000000 0.0000000000 20.4025000000 0.0000000000 -1.0000000000
0.0000000000 -35.3381666014 0.0000000000 0.0000000000 1.0000000000 0.0000000000
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2015-06-17
2 'Structure model' 1 1 2015-09-09
3 'Structure model' 1 2 2023-09-20
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Database references'
2 3 'Structure model' 'Data collection'
3 3 'Structure model' 'Database references'
4 3 'Structure model' 'Derived calculations'
5 3 'Structure model' 'Refinement description'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 3 'Structure model' chem_comp_atom
2 3 'Structure model' chem_comp_bond
3 3 'Structure model' database_2
4 3 'Structure model' pdbx_initial_refinement_model
5 3 'Structure model' struct_site
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 3 'Structure model' '_database_2.pdbx_DOI'
2 3 'Structure model' '_database_2.pdbx_database_accession'
3 3 'Structure model' '_struct_site.pdbx_auth_asym_id'
4 3 'Structure model' '_struct_site.pdbx_auth_comp_id'
5 3 'Structure model' '_struct_site.pdbx_auth_seq_id'
#
_pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION'
_pdbx_refine_tls.id 1
_pdbx_refine_tls.details ?
_pdbx_refine_tls.method refined
_pdbx_refine_tls.origin_x 11.2230
_pdbx_refine_tls.origin_y -14.9430
_pdbx_refine_tls.origin_z -12.0100
_pdbx_refine_tls.T[1][1] 0.2703
_pdbx_refine_tls.T[2][2] 0.3815
_pdbx_refine_tls.T[3][3] 0.3786
_pdbx_refine_tls.T[1][2] -0.1175
_pdbx_refine_tls.T[1][3] -0.0711
_pdbx_refine_tls.T[2][3] 0.0037
_pdbx_refine_tls.L[1][1] 3.7733
_pdbx_refine_tls.L[2][2] 7.7573
_pdbx_refine_tls.L[3][3] 12.2400
_pdbx_refine_tls.L[1][2] 3.3618
_pdbx_refine_tls.L[1][3] -4.6465
_pdbx_refine_tls.L[2][3] -3.2455
_pdbx_refine_tls.S[1][1] -0.7706
_pdbx_refine_tls.S[1][2] -0.0756
_pdbx_refine_tls.S[1][3] -0.1030
_pdbx_refine_tls.S[2][1] -1.1728
_pdbx_refine_tls.S[2][2] 0.5740
_pdbx_refine_tls.S[2][3] -0.3368
_pdbx_refine_tls.S[3][1] 0.6688
_pdbx_refine_tls.S[3][2] -0.2792
_pdbx_refine_tls.S[3][3] 0.1965
#
_pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION'
_pdbx_refine_tls_group.id 1
_pdbx_refine_tls_group.refine_tls_id 1
_pdbx_refine_tls_group.beg_auth_asym_id A
_pdbx_refine_tls_group.beg_auth_seq_id 1
_pdbx_refine_tls_group.beg_label_asym_id ?
_pdbx_refine_tls_group.beg_label_seq_id ?
_pdbx_refine_tls_group.end_auth_asym_id A
_pdbx_refine_tls_group.end_auth_seq_id 13
_pdbx_refine_tls_group.end_label_asym_id ?
_pdbx_refine_tls_group.end_label_seq_id ?
_pdbx_refine_tls_group.selection ?
_pdbx_refine_tls_group.selection_details ?
#
_software.name REFMAC
_software.classification refinement
_software.version 5.8.0073
_software.citation_id ?
_software.pdbx_ordinal 1
#
loop_
_pdbx_unobs_or_zero_occ_atoms.id
_pdbx_unobs_or_zero_occ_atoms.PDB_model_num
_pdbx_unobs_or_zero_occ_atoms.polymer_flag
_pdbx_unobs_or_zero_occ_atoms.occupancy_flag
_pdbx_unobs_or_zero_occ_atoms.auth_asym_id
_pdbx_unobs_or_zero_occ_atoms.auth_comp_id
_pdbx_unobs_or_zero_occ_atoms.auth_seq_id
_pdbx_unobs_or_zero_occ_atoms.PDB_ins_code
_pdbx_unobs_or_zero_occ_atoms.auth_atom_id
_pdbx_unobs_or_zero_occ_atoms.label_alt_id
_pdbx_unobs_or_zero_occ_atoms.label_asym_id
_pdbx_unobs_or_zero_occ_atoms.label_comp_id
_pdbx_unobs_or_zero_occ_atoms.label_seq_id
_pdbx_unobs_or_zero_occ_atoms.label_atom_id
1 1 Y 1 A DG 13 ? "C5'" ? A DG 13 "C5'"
2 1 Y 1 A DG 13 ? "C4'" ? A DG 13 "C4'"
3 1 Y 1 A DG 13 ? "O4'" ? A DG 13 "O4'"
4 1 Y 1 A DG 13 ? "C3'" ? A DG 13 "C3'"
5 1 Y 1 A DG 13 ? "O3'" ? A DG 13 "O3'"
6 1 Y 1 A DG 13 ? "C2'" ? A DG 13 "C2'"
7 1 Y 1 A DG 13 ? "C1'" ? A DG 13 "C1'"
8 1 Y 1 A DG 13 ? N9 ? A DG 13 N9
9 1 Y 1 A DG 13 ? C8 ? A DG 13 C8
10 1 Y 1 A DG 13 ? N7 ? A DG 13 N7
11 1 Y 1 A DG 13 ? C5 ? A DG 13 C5
12 1 Y 1 A DG 13 ? C6 ? A DG 13 C6
13 1 Y 1 A DG 13 ? O6 ? A DG 13 O6
14 1 Y 1 A DG 13 ? N1 ? A DG 13 N1
15 1 Y 1 A DG 13 ? C2 ? A DG 13 C2
16 1 Y 1 A DG 13 ? N2 ? A DG 13 N2
17 1 Y 1 A DG 13 ? N3 ? A DG 13 N3
18 1 Y 1 A DG 13 ? C4 ? A DG 13 C4
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
DA OP3 O N N 1
DA P P N N 2
DA OP1 O N N 3
DA OP2 O N N 4
DA "O5'" O N N 5
DA "C5'" C N N 6
DA "C4'" C N R 7
DA "O4'" O N N 8
DA "C3'" C N S 9
DA "O3'" O N N 10
DA "C2'" C N N 11
DA "C1'" C N R 12
DA N9 N Y N 13
DA C8 C Y N 14
DA N7 N Y N 15
DA C5 C Y N 16
DA C6 C Y N 17
DA N6 N N N 18
DA N1 N Y N 19
DA C2 C Y N 20
DA N3 N Y N 21
DA C4 C Y N 22
DA HOP3 H N N 23
DA HOP2 H N N 24
DA "H5'" H N N 25
DA "H5''" H N N 26
DA "H4'" H N N 27
DA "H3'" H N N 28
DA "HO3'" H N N 29
DA "H2'" H N N 30
DA "H2''" H N N 31
DA "H1'" H N N 32
DA H8 H N N 33
DA H61 H N N 34
DA H62 H N N 35
DA H2 H N N 36
DC OP3 O N N 37
DC P P N N 38
DC OP1 O N N 39
DC OP2 O N N 40
DC "O5'" O N N 41
DC "C5'" C N N 42
DC "C4'" C N R 43
DC "O4'" O N N 44
DC "C3'" C N S 45
DC "O3'" O N N 46
DC "C2'" C N N 47
DC "C1'" C N R 48
DC N1 N N N 49
DC C2 C N N 50
DC O2 O N N 51
DC N3 N N N 52
DC C4 C N N 53
DC N4 N N N 54
DC C5 C N N 55
DC C6 C N N 56
DC HOP3 H N N 57
DC HOP2 H N N 58
DC "H5'" H N N 59
DC "H5''" H N N 60
DC "H4'" H N N 61
DC "H3'" H N N 62
DC "HO3'" H N N 63
DC "H2'" H N N 64
DC "H2''" H N N 65
DC "H1'" H N N 66
DC H41 H N N 67
DC H42 H N N 68
DC H5 H N N 69
DC H6 H N N 70
DG OP3 O N N 71
DG P P N N 72
DG OP1 O N N 73
DG OP2 O N N 74
DG "O5'" O N N 75
DG "C5'" C N N 76
DG "C4'" C N R 77
DG "O4'" O N N 78
DG "C3'" C N S 79
DG "O3'" O N N 80
DG "C2'" C N N 81
DG "C1'" C N R 82
DG N9 N Y N 83
DG C8 C Y N 84
DG N7 N Y N 85
DG C5 C Y N 86
DG C6 C N N 87
DG O6 O N N 88
DG N1 N N N 89
DG C2 C N N 90
DG N2 N N N 91
DG N3 N N N 92
DG C4 C Y N 93
DG HOP3 H N N 94
DG HOP2 H N N 95
DG "H5'" H N N 96
DG "H5''" H N N 97
DG "H4'" H N N 98
DG "H3'" H N N 99
DG "HO3'" H N N 100
DG "H2'" H N N 101
DG "H2''" H N N 102
DG "H1'" H N N 103
DG H8 H N N 104
DG H1 H N N 105
DG H21 H N N 106
DG H22 H N N 107
DT OP3 O N N 108
DT P P N N 109
DT OP1 O N N 110
DT OP2 O N N 111
DT "O5'" O N N 112
DT "C5'" C N N 113
DT "C4'" C N R 114
DT "O4'" O N N 115
DT "C3'" C N S 116
DT "O3'" O N N 117
DT "C2'" C N N 118
DT "C1'" C N R 119
DT N1 N N N 120
DT C2 C N N 121
DT O2 O N N 122
DT N3 N N N 123
DT C4 C N N 124
DT O4 O N N 125
DT C5 C N N 126
DT C7 C N N 127
DT C6 C N N 128
DT HOP3 H N N 129
DT HOP2 H N N 130
DT "H5'" H N N 131
DT "H5''" H N N 132
DT "H4'" H N N 133
DT "H3'" H N N 134
DT "HO3'" H N N 135
DT "H2'" H N N 136
DT "H2''" H N N 137
DT "H1'" H N N 138
DT H3 H N N 139
DT H71 H N N 140
DT H72 H N N 141
DT H73 H N N 142
DT H6 H N N 143
HOH O O N N 144
HOH H1 H N N 145
HOH H2 H N N 146
MG MG MG N N 147
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DA OP3 P sing N N 1
DA OP3 HOP3 sing N N 2
DA P OP1 doub N N 3
DA P OP2 sing N N 4
DA P "O5'" sing N N 5
DA OP2 HOP2 sing N N 6
DA "O5'" "C5'" sing N N 7
DA "C5'" "C4'" sing N N 8
DA "C5'" "H5'" sing N N 9
DA "C5'" "H5''" sing N N 10
DA "C4'" "O4'" sing N N 11
DA "C4'" "C3'" sing N N 12
DA "C4'" "H4'" sing N N 13
DA "O4'" "C1'" sing N N 14
DA "C3'" "O3'" sing N N 15
DA "C3'" "C2'" sing N N 16
DA "C3'" "H3'" sing N N 17
DA "O3'" "HO3'" sing N N 18
DA "C2'" "C1'" sing N N 19
DA "C2'" "H2'" sing N N 20
DA "C2'" "H2''" sing N N 21
DA "C1'" N9 sing N N 22
DA "C1'" "H1'" sing N N 23
DA N9 C8 sing Y N 24
DA N9 C4 sing Y N 25
DA C8 N7 doub Y N 26
DA C8 H8 sing N N 27
DA N7 C5 sing Y N 28
DA C5 C6 sing Y N 29
DA C5 C4 doub Y N 30
DA C6 N6 sing N N 31
DA C6 N1 doub Y N 32
DA N6 H61 sing N N 33
DA N6 H62 sing N N 34
DA N1 C2 sing Y N 35
DA C2 N3 doub Y N 36
DA C2 H2 sing N N 37
DA N3 C4 sing Y N 38
DC OP3 P sing N N 39
DC OP3 HOP3 sing N N 40
DC P OP1 doub N N 41
DC P OP2 sing N N 42
DC P "O5'" sing N N 43
DC OP2 HOP2 sing N N 44
DC "O5'" "C5'" sing N N 45
DC "C5'" "C4'" sing N N 46
DC "C5'" "H5'" sing N N 47
DC "C5'" "H5''" sing N N 48
DC "C4'" "O4'" sing N N 49
DC "C4'" "C3'" sing N N 50
DC "C4'" "H4'" sing N N 51
DC "O4'" "C1'" sing N N 52
DC "C3'" "O3'" sing N N 53
DC "C3'" "C2'" sing N N 54
DC "C3'" "H3'" sing N N 55
DC "O3'" "HO3'" sing N N 56
DC "C2'" "C1'" sing N N 57
DC "C2'" "H2'" sing N N 58
DC "C2'" "H2''" sing N N 59
DC "C1'" N1 sing N N 60
DC "C1'" "H1'" sing N N 61
DC N1 C2 sing N N 62
DC N1 C6 sing N N 63
DC C2 O2 doub N N 64
DC C2 N3 sing N N 65
DC N3 C4 doub N N 66
DC C4 N4 sing N N 67
DC C4 C5 sing N N 68
DC N4 H41 sing N N 69
DC N4 H42 sing N N 70
DC C5 C6 doub N N 71
DC C5 H5 sing N N 72
DC C6 H6 sing N N 73
DG OP3 P sing N N 74
DG OP3 HOP3 sing N N 75
DG P OP1 doub N N 76
DG P OP2 sing N N 77
DG P "O5'" sing N N 78
DG OP2 HOP2 sing N N 79
DG "O5'" "C5'" sing N N 80
DG "C5'" "C4'" sing N N 81
DG "C5'" "H5'" sing N N 82
DG "C5'" "H5''" sing N N 83
DG "C4'" "O4'" sing N N 84
DG "C4'" "C3'" sing N N 85
DG "C4'" "H4'" sing N N 86
DG "O4'" "C1'" sing N N 87
DG "C3'" "O3'" sing N N 88
DG "C3'" "C2'" sing N N 89
DG "C3'" "H3'" sing N N 90
DG "O3'" "HO3'" sing N N 91
DG "C2'" "C1'" sing N N 92
DG "C2'" "H2'" sing N N 93
DG "C2'" "H2''" sing N N 94
DG "C1'" N9 sing N N 95
DG "C1'" "H1'" sing N N 96
DG N9 C8 sing Y N 97
DG N9 C4 sing Y N 98
DG C8 N7 doub Y N 99
DG C8 H8 sing N N 100
DG N7 C5 sing Y N 101
DG C5 C6 sing N N 102
DG C5 C4 doub Y N 103
DG C6 O6 doub N N 104
DG C6 N1 sing N N 105
DG N1 C2 sing N N 106
DG N1 H1 sing N N 107
DG C2 N2 sing N N 108
DG C2 N3 doub N N 109
DG N2 H21 sing N N 110
DG N2 H22 sing N N 111
DG N3 C4 sing N N 112
DT OP3 P sing N N 113
DT OP3 HOP3 sing N N 114
DT P OP1 doub N N 115
DT P OP2 sing N N 116
DT P "O5'" sing N N 117
DT OP2 HOP2 sing N N 118
DT "O5'" "C5'" sing N N 119
DT "C5'" "C4'" sing N N 120
DT "C5'" "H5'" sing N N 121
DT "C5'" "H5''" sing N N 122
DT "C4'" "O4'" sing N N 123
DT "C4'" "C3'" sing N N 124
DT "C4'" "H4'" sing N N 125
DT "O4'" "C1'" sing N N 126
DT "C3'" "O3'" sing N N 127
DT "C3'" "C2'" sing N N 128
DT "C3'" "H3'" sing N N 129
DT "O3'" "HO3'" sing N N 130
DT "C2'" "C1'" sing N N 131
DT "C2'" "H2'" sing N N 132
DT "C2'" "H2''" sing N N 133
DT "C1'" N1 sing N N 134
DT "C1'" "H1'" sing N N 135
DT N1 C2 sing N N 136
DT N1 C6 sing N N 137
DT C2 O2 doub N N 138
DT C2 N3 sing N N 139
DT N3 C4 sing N N 140
DT N3 H3 sing N N 141
DT C4 O4 doub N N 142
DT C4 C5 sing N N 143
DT C5 C7 sing N N 144
DT C5 C6 doub N N 145
DT C7 H71 sing N N 146
DT C7 H72 sing N N 147
DT C7 H73 sing N N 148
DT C6 H6 sing N N 149
HOH O H1 sing N N 150
HOH O H2 sing N N 151
#
_ndb_struct_conf_na.entry_id 4RP1
_ndb_struct_conf_na.feature 'b-form double helix'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A DT 4 1_555 A DA 9 4_545 0.095 -0.109 0.051 -3.117 -11.901 -2.004 1 A_DT4:DA9_A A 4 ? A 9 ? 20 1
1 A DA 5 1_555 A DT 8 4_545 0.087 -0.177 0.117 5.528 -16.087 -5.076 2 A_DA5:DT8_A A 5 ? A 8 ? 20 1
1 A DC 6 1_555 A DG 7 4_545 -0.154 -0.103 0.338 -4.472 -12.291 -1.202 3 A_DC6:DG7_A A 6 ? A 7 ? 19 1
1 A DG 7 1_555 A DC 6 4_545 0.154 -0.103 0.338 4.472 -12.291 -1.202 4 A_DG7:DC6_A A 7 ? A 6 ? 19 1
1 A DT 8 1_555 A DA 5 4_545 -0.087 -0.177 0.117 -5.528 -16.087 -5.076 5 A_DT8:DA5_A A 8 ? A 5 ? 20 1
1 A DA 9 1_555 A DT 4 4_545 -0.095 -0.109 0.051 3.117 -11.901 -2.004 6 A_DA9:DT4_A A 9 ? A 4 ? 20 1
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A DT 4 1_555 A DA 9 4_545 A DA 5 1_555 A DT 8 4_545 -0.576 0.554 3.179 1.036 1.237 40.881 0.661 0.935 3.179 1.770 -1.482
40.912 1 AA_DT4DA5:DT8DA9_AA A 4 ? A 9 ? A 5 ? A 8 ?
1 A DA 5 1_555 A DT 8 4_545 A DC 6 1_555 A DG 7 4_545 0.572 -0.368 3.540 -1.902 2.006 33.053 -1.007 -1.345 3.475 3.519 3.336
33.165 2 AA_DA5DC6:DG7DT8_AA A 5 ? A 8 ? A 6 ? A 7 ?
1 A DC 6 1_555 A DG 7 4_545 A DG 7 1_555 A DC 6 4_545 0.000 0.541 3.112 0.000 7.682 35.861 -0.161 0.000 3.157 12.302 0.000
36.648 3 AA_DC6DG7:DC6DG7_AA A 6 ? A 7 ? A 7 ? A 6 ?
1 A DG 7 1_555 A DC 6 4_545 A DT 8 1_555 A DA 5 4_545 -0.572 -0.368 3.540 1.902 2.006 33.053 -1.007 1.345 3.475 3.519 -3.336
33.165 4 AA_DG7DT8:DA5DC6_AA A 7 ? A 6 ? A 8 ? A 5 ?
1 A DT 8 1_555 A DA 5 4_545 A DA 9 1_555 A DT 4 4_545 0.576 0.554 3.179 -1.036 1.237 40.881 0.661 -0.935 3.179 1.770 1.482
40.912 5 AA_DT8DA9:DT4DA5_AA A 8 ? A 5 ? A 9 ? A 4 ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2 'MAGNESIUM ION' MG
3 water HOH
#
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'experimental model'
_pdbx_initial_refinement_model.source_name PDB
_pdbx_initial_refinement_model.accession_code 1P1Y
_pdbx_initial_refinement_model.details 'PDB ENTRY 1p1y'
#