data_4LY2
#
_entry.id 4LY2
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.387
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 4LY2 pdb_00004ly2 10.2210/pdb4ly2/pdb
NDB NA2622 ? ?
RCSB RCSB081229 ? ?
WWPDB D_1000081229 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2014-09-24
2 'Structure model' 1 1 2018-01-24
3 'Structure model' 1 2 2024-02-28
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Database references'
2 2 'Structure model' 'Structure summary'
3 3 'Structure model' 'Data collection'
4 3 'Structure model' 'Database references'
5 3 'Structure model' 'Derived calculations'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 2 'Structure model' audit_author
2 2 'Structure model' citation_author
3 3 'Structure model' chem_comp_atom
4 3 'Structure model' chem_comp_bond
5 3 'Structure model' database_2
6 3 'Structure model' pdbx_struct_conn_angle
7 3 'Structure model' pdbx_struct_special_symmetry
8 3 'Structure model' struct_conn
9 3 'Structure model' struct_site
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 2 'Structure model' '_audit_author.name'
2 2 'Structure model' '_citation_author.name'
3 3 'Structure model' '_database_2.pdbx_DOI'
4 3 'Structure model' '_database_2.pdbx_database_accession'
5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id'
6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id'
7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id'
8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id'
9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id'
10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id'
11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id'
12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id'
13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id'
14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id'
15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id'
16 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id'
17 3 'Structure model' '_pdbx_struct_conn_angle.value'
18 3 'Structure model' '_struct_conn.pdbx_dist_value'
19 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id'
20 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id'
21 3 'Structure model' '_struct_conn.ptnr1_label_asym_id'
22 3 'Structure model' '_struct_conn.ptnr1_label_atom_id'
23 3 'Structure model' '_struct_conn.ptnr1_label_comp_id'
24 3 'Structure model' '_struct_conn.ptnr1_label_seq_id'
25 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id'
26 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id'
27 3 'Structure model' '_struct_conn.ptnr2_label_asym_id'
28 3 'Structure model' '_struct_conn.ptnr2_label_atom_id'
29 3 'Structure model' '_struct_conn.ptnr2_label_comp_id'
30 3 'Structure model' '_struct_site.pdbx_auth_asym_id'
31 3 'Structure model' '_struct_site.pdbx_auth_comp_id'
32 3 'Structure model' '_struct_site.pdbx_auth_seq_id'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 4LY2
_pdbx_database_status.recvd_initial_deposition_date 2013-07-30
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.SG_entry ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_nmr_data ?
#
loop_
_pdbx_database_related.db_name
_pdbx_database_related.db_id
_pdbx_database_related.details
_pdbx_database_related.content_type
PDB 3UYA 'X-ray crystal structure of the ruthenium complex [Ru(tap)2(dppz)]2+ bound to d(CCGGTACCGG)' unspecified
PDB 3UYB 'X-ray crystal structure of the ruthenium complex [Ru(tap)2(dppz)]2+ bound to d(TCGGTACCGA)' unspecified
PDB 3U38 'Intercalation of lambda-[Ru(phen)2(dppz)]2+ into d(CCGGTACCGG)2' unspecified
PDB 4E7Y 'Lambda-[Ru(phen)2(dppz)]2+ Bound to CCGGATCCGG' unspecified
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Niyazi, H.' 1
'Teixeira, S.' 2
'Mitchell, E.' 3
'Forsyth, T.' 4
'Cardin, C.' 5
#
_citation.id primary
_citation.title 'X-ray crystal structure of the ruthenium complex [Ru(phen)2(dppz)]2+ bound to d(TCGGTACCGA)'
_citation.journal_abbrev 'To be Published'
_citation.journal_volume ?
_citation.page_first ?
_citation.page_last ?
_citation.year ?
_citation.journal_id_ASTM ?
_citation.country ?
_citation.journal_id_ISSN ?
_citation.journal_id_CSD 0353
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed ?
_citation.pdbx_database_id_DOI ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Niyazi, H.' 1 ?
primary 'Teixeira, S.' 2 ?
primary 'Mitchell, E.' 3 ?
primary 'Forsyth, T.' 4 ?
primary 'Cardin, C.' 5 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn DNA 3045.005 1 ? ? ? ?
2 non-polymer syn 'Lambda-Ru(phen)2(dppz) complex' 743.779 2 ? ? ? ?
3 non-polymer syn 'BARIUM ION' 137.327 1 ? ? ? ?
4 water nat water 18.015 20 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type polydeoxyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code '(DT)(DC)(DG)(DG)(DT)(DA)(DC)(DC)(DG)(DA)'
_entity_poly.pdbx_seq_one_letter_code_can TCGGTACCGA
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2 'Lambda-Ru(phen)2(dppz) complex' RKP
3 'BARIUM ION' BA
4 water HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 DT n
1 2 DC n
1 3 DG n
1 4 DG n
1 5 DT n
1 6 DA n
1 7 DC n
1 8 DC n
1 9 DG n
1 10 DA n
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num ?
_pdbx_entity_src_syn.pdbx_end_seq_num ?
_pdbx_entity_src_syn.organism_scientific ?
_pdbx_entity_src_syn.organism_common_name ?
_pdbx_entity_src_syn.ncbi_taxonomy_id ?
_pdbx_entity_src_syn.details 'Synthetic DNA purchased from ATDbio Ltd'
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
BA non-polymer . 'BARIUM ION' ? 'Ba 2' 137.327
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221
DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208
HOH non-polymer . WATER ? 'H2 O' 18.015
RKP non-polymer . 'Lambda-Ru(phen)2(dppz) complex' ? 'C42 H26 N8 Ru' 743.779
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 DT 1 1 1 DT DT A . n
A 1 2 DC 2 2 2 DC DC A . n
A 1 3 DG 3 3 3 DG DG A . n
A 1 4 DG 4 4 4 DG DG A . n
A 1 5 DT 5 5 5 DT DT A . n
A 1 6 DA 6 6 6 DA DA A . n
A 1 7 DC 7 7 7 DC DC A . n
A 1 8 DC 8 8 8 DC DC A . n
A 1 9 DG 9 9 9 DG DG A . n
A 1 10 DA 10 10 10 DA DA A . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 RKP 1 101 14 RKP RKP A .
C 2 RKP 1 102 15 RKP RKP A .
D 3 BA 1 103 16 BA BA A .
E 4 HOH 1 201 1 HOH HOH A .
E 4 HOH 2 202 2 HOH HOH A .
E 4 HOH 3 203 3 HOH HOH A .
E 4 HOH 4 204 4 HOH HOH A .
E 4 HOH 5 205 5 HOH HOH A .
E 4 HOH 6 206 6 HOH HOH A .
E 4 HOH 7 207 7 HOH HOH A .
E 4 HOH 8 208 9 HOH HOH A .
E 4 HOH 9 209 10 HOH HOH A .
E 4 HOH 10 210 11 HOH HOH A .
E 4 HOH 11 211 12 HOH HOH A .
E 4 HOH 12 212 13 HOH HOH A .
E 4 HOH 13 213 14 HOH HOH A .
E 4 HOH 14 214 15 HOH HOH A .
E 4 HOH 15 215 17 HOH HOH A .
E 4 HOH 16 216 18 HOH HOH A .
E 4 HOH 17 217 19 HOH HOH A .
E 4 HOH 18 218 21 HOH HOH A .
E 4 HOH 19 219 22 HOH HOH A .
E 4 HOH 20 220 24 HOH HOH A .
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
MxCuBE 'data collection' . ? 1
SHELXS phasing . ? 2
REFMAC refinement 5.7.0029 ? 3
MOSFLM 'data reduction' . ? 4
SCALA 'data scaling' . ? 5
#
_cell.entry_id 4LY2
_cell.length_a 52.450
_cell.length_b 52.450
_cell.length_c 32.580
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 90.00
_cell.Z_PDB 8
_cell.pdbx_unique_axis ?
_cell.length_a_esd ?
_cell.length_b_esd ?
_cell.length_c_esd ?
_cell.angle_alpha_esd ?
_cell.angle_beta_esd ?
_cell.angle_gamma_esd ?
#
_symmetry.entry_id 4LY2
_symmetry.space_group_name_H-M 'P 43 21 2'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 96
_symmetry.space_group_name_Hall ?
#
_exptl.entry_id 4LY2
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number ?
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 3.68
_exptl_crystal.density_percent_sol 66.57
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.preparation ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP'
_exptl_crystal_grow.temp 293
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 7
_exptl_crystal_grow.pdbx_details
;Performed using the sitting drop vapour diffusion method, by adding 1ul (4mM) L-[Ru(phen)2(dppz)]2+ to a drop containing 1ul (1mM) d(TCGGTACCGA)2, and 8ul of a solution containing 12mM spermine, 10% 2-methyl-2,4-pentanediol, 40 mM sodium cacodylate pH 7.0, 80 mM NaCl and 20 mM BaCl2. This was equilibrated against 1 ml of 35% 2-methyl-2,4-pantanediol at room temperature, 20 C., VAPOR DIFFUSION, SITTING DROP, temperature 293K
;
_exptl_crystal_grow.pdbx_pH_range ?
#
_diffrn.id 1
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector CCD
_diffrn_detector.type 'ADSC QUANTUM 315r'
_diffrn_detector.pdbx_collection_date 2012-06-10
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator 'Si (111)'
_diffrn_radiation.pdbx_diffrn_protocol MAD
_diffrn_radiation.pdbx_scattering_type x-ray
#
loop_
_diffrn_radiation_wavelength.id
_diffrn_radiation_wavelength.wavelength
_diffrn_radiation_wavelength.wt
1 1.54980 1.0
2 0.97240 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source SYNCHROTRON
_diffrn_source.type 'ESRF BEAMLINE ID23-1'
_diffrn_source.pdbx_synchrotron_site ESRF
_diffrn_source.pdbx_synchrotron_beamline ID23-1
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list '1.54980, 0.97240'
#
_reflns.entry_id 4LY2
_reflns.observed_criterion_sigma_I 2.0
_reflns.observed_criterion_sigma_F ?
_reflns.d_resolution_low 52.45
_reflns.d_resolution_high 1.76
_reflns.number_obs 4849
_reflns.number_all ?
_reflns.percent_possible_obs 98.8
_reflns.pdbx_Rmerge_I_obs ?
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_sigmaI ?
_reflns.B_iso_Wilson_estimate ?
_reflns.pdbx_redundancy ?
_reflns.R_free_details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_ordinal 1
_reflns.pdbx_diffrn_id 1
#
_refine.entry_id 4LY2
_refine.ls_number_reflns_obs 2711
_refine.ls_number_reflns_all ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F .
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 37.09
_refine.ls_d_res_high 2.10
_refine.ls_percent_reflns_obs 97.46
_refine.ls_R_factor_obs 0.18968
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work 0.18817
_refine.ls_R_factor_R_free 0.21860
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free 4.5
_refine.ls_number_reflns_R_free 129
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.correlation_coeff_Fo_to_Fc 0.936
_refine.correlation_coeff_Fo_to_Fc_free 0.945
_refine.B_iso_mean 39.170
_refine.aniso_B[1][1] -0.60
_refine.aniso_B[2][2] -0.60
_refine.aniso_B[3][3] 1.19
_refine.aniso_B[1][2] -0.00
_refine.aniso_B[1][3] -0.00
_refine.aniso_B[2][3] 0.00
_refine.solvent_model_details MASK
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_solvent_vdw_probe_radii 1.20
_refine.pdbx_solvent_ion_probe_radii 0.80
_refine.pdbx_solvent_shrinkage_radii 0.80
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS'
_refine.pdbx_starting_model ?
_refine.pdbx_method_to_determine_struct MAD
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD'
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_overall_ESU_R 0.194
_refine.pdbx_overall_ESU_R_Free 0.163
_refine.overall_SU_ML 0.108
_refine.pdbx_overall_phase_error ?
_refine.overall_SU_B 4.391
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.ls_redundancy_reflns_obs ?
_refine.B_iso_min ?
_refine.B_iso_max ?
_refine.overall_SU_R_free ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_diffrn_id 1
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 202
_refine_hist.pdbx_number_atoms_ligand 103
_refine_hist.number_atoms_solvent 20
_refine_hist.number_atoms_total 325
_refine_hist.d_res_high 2.10
_refine_hist.d_res_low 37.09
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_restraint_function
_refine_ls_restr.pdbx_refine_id
r_bond_refined_d 0.016 0.014 ? 354 ? 'X-RAY DIFFRACTION'
r_bond_other_d 0.003 0.020 ? 171 ? 'X-RAY DIFFRACTION'
r_angle_refined_deg 3.348 1.873 ? 565 ? 'X-RAY DIFFRACTION'
r_angle_other_deg 3.351 3.000 ? 389 ? 'X-RAY DIFFRACTION'
r_chiral_restr 0.884 0.200 ? 38 ? 'X-RAY DIFFRACTION'
r_gen_planes_refined 0.032 0.020 ? 225 ? 'X-RAY DIFFRACTION'
r_gen_planes_other 0.002 0.020 ? 104 ? 'X-RAY DIFFRACTION'
#
_refine_ls_shell.pdbx_total_number_of_bins_used 20
_refine_ls_shell.d_res_high 2.099
_refine_ls_shell.d_res_low 2.154
_refine_ls_shell.number_reflns_R_work 178
_refine_ls_shell.R_factor_R_work 0.240
_refine_ls_shell.percent_reflns_obs 88.41
_refine_ls_shell.R_factor_R_free 0.187
_refine_ls_shell.R_factor_R_free_error ?
_refine_ls_shell.percent_reflns_R_free ?
_refine_ls_shell.number_reflns_R_free 5
_refine_ls_shell.number_reflns_all ?
_refine_ls_shell.R_factor_all ?
_refine_ls_shell.number_reflns_obs ?
_refine_ls_shell.redundancy_reflns_obs ?
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
#
_database_PDB_matrix.entry_id 4LY2
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 4LY2
_struct.title 'X-ray crystal structure of the ruthenium complex [Ru(phen)2(dppz)]2+ bound to d(TCGGTACCGA)'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 4LY2
_struct_keywords.pdbx_keywords DNA
_struct_keywords.text
;Intercalation, semi-intercalation, symmetrical intercalation, ligand binding, Light-switch compounds, DNA damage agent, guanine oxidation, DNA
;
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 2 ?
D N N 3 ?
E N N 4 ?
#
_struct_ref.id 1
_struct_ref.db_name PDB
_struct_ref.db_code 4LY2
_struct_ref.pdbx_db_accession 4LY2
_struct_ref.entity_id 1
_struct_ref.pdbx_align_begin ?
_struct_ref.pdbx_seq_one_letter_code TCGGTACCGA
_struct_ref.pdbx_db_isoform ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 4LY2
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 10
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession 4LY2
_struct_ref_seq.db_align_beg 1
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 10
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 10
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_and_software_defined_assembly
_pdbx_struct_assembly.method_details PISA
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
loop_
_pdbx_struct_assembly_prop.biol_id
_pdbx_struct_assembly_prop.type
_pdbx_struct_assembly_prop.value
_pdbx_struct_assembly_prop.details
1 'ABSA (A^2)' 930 ?
1 MORE -5 ?
1 'SSA (A^2)' 4600 ?
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1,2
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 7_555 y,x,-z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
#
_struct_biol.id 1
_struct_biol.details ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
metalc1 metalc ? ? A DG 4 O6 ? ? ? 1_555 D BA . BA ? ? A DG 4 A BA 103 1_555 ? ? ? ? ? ? ? 2.893 ? ?
metalc2 metalc ? ? A DT 5 O4 ? ? ? 1_555 D BA . BA ? ? A DT 5 A BA 103 1_555 ? ? ? ? ? ? ? 2.964 ? ?
metalc3 metalc ? ? D BA . BA ? ? ? 1_555 E HOH . O ? ? A BA 103 A HOH 210 1_555 ? ? ? ? ? ? ? 2.835 ? ?
metalc4 metalc ? ? D BA . BA ? ? ? 1_555 E HOH . O ? ? A BA 103 A HOH 212 1_555 ? ? ? ? ? ? ? 2.951 ? ?
metalc5 metalc ? ? D BA . BA ? ? ? 1_555 E HOH . O ? ? A BA 103 A HOH 213 1_555 ? ? ? ? ? ? ? 3.039 ? ?
hydrog1 hydrog ? ? A DC 2 N3 ? ? ? 1_555 A DG 9 N1 ? ? A DC 2 A DG 9 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog2 hydrog ? ? A DC 2 N4 ? ? ? 1_555 A DG 9 O6 ? ? A DC 2 A DG 9 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog3 hydrog ? ? A DC 2 O2 ? ? ? 1_555 A DG 9 N2 ? ? A DC 2 A DG 9 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog4 hydrog ? ? A DG 3 N1 ? ? ? 1_555 A DC 8 N3 ? ? A DG 3 A DC 8 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog5 hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DC 8 O2 ? ? A DG 3 A DC 8 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog6 hydrog ? ? A DG 3 O6 ? ? ? 1_555 A DC 8 N4 ? ? A DG 3 A DC 8 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog7 hydrog ? ? A DG 4 N1 ? ? ? 1_555 A DC 7 N3 ? ? A DG 4 A DC 7 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog8 hydrog ? ? A DG 4 N2 ? ? ? 1_555 A DC 7 O2 ? ? A DG 4 A DC 7 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog9 hydrog ? ? A DG 4 O6 ? ? ? 1_555 A DC 7 N4 ? ? A DG 4 A DC 7 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog10 hydrog ? ? A DT 5 N3 ? ? ? 1_555 A DA 6 N1 ? ? A DT 5 A DA 6 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog11 hydrog ? ? A DT 5 O4 ? ? ? 1_555 A DA 6 N6 ? ? A DT 5 A DA 6 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog12 hydrog ? ? A DA 6 N1 ? ? ? 1_555 A DT 5 N3 ? ? A DA 6 A DT 5 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog13 hydrog ? ? A DA 6 N6 ? ? ? 1_555 A DT 5 O4 ? ? A DA 6 A DT 5 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog14 hydrog ? ? A DC 7 N3 ? ? ? 1_555 A DG 4 N1 ? ? A DC 7 A DG 4 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog15 hydrog ? ? A DC 7 N4 ? ? ? 1_555 A DG 4 O6 ? ? A DC 7 A DG 4 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog16 hydrog ? ? A DC 7 O2 ? ? ? 1_555 A DG 4 N2 ? ? A DC 7 A DG 4 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog17 hydrog ? ? A DC 8 N3 ? ? ? 1_555 A DG 3 N1 ? ? A DC 8 A DG 3 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog18 hydrog ? ? A DC 8 N4 ? ? ? 1_555 A DG 3 O6 ? ? A DC 8 A DG 3 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog19 hydrog ? ? A DC 8 O2 ? ? ? 1_555 A DG 3 N2 ? ? A DC 8 A DG 3 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog20 hydrog ? ? A DG 9 N1 ? ? ? 1_555 A DC 2 N3 ? ? A DG 9 A DC 2 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog21 hydrog ? ? A DG 9 N2 ? ? ? 1_555 A DC 2 O2 ? ? A DG 9 A DC 2 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog22 hydrog ? ? A DG 9 O6 ? ? ? 1_555 A DC 2 N4 ? ? A DG 9 A DC 2 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
metalc ? ?
hydrog ? ?
#
loop_
_pdbx_struct_conn_angle.id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_alt_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_auth_atom_id
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_alt_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr2_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_atom_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code
_pdbx_struct_conn_angle.ptnr2_symmetry
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_alt_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_atom_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_pdbx_struct_conn_angle.value_esd
1 O6 ? A DG 4 ? A DG 4 ? 1_555 BA ? D BA . ? A BA 103 ? 1_555 O4 ? A DT 5 ? A DT 5 ? 1_555 70.5 ?
2 O6 ? A DG 4 ? A DG 4 ? 1_555 BA ? D BA . ? A BA 103 ? 1_555 O ? E HOH . ? A HOH 210 ? 1_555 134.8 ?
3 O4 ? A DT 5 ? A DT 5 ? 1_555 BA ? D BA . ? A BA 103 ? 1_555 O ? E HOH . ? A HOH 210 ? 1_555 65.1 ?
4 O6 ? A DG 4 ? A DG 4 ? 1_555 BA ? D BA . ? A BA 103 ? 1_555 O ? E HOH . ? A HOH 212 ? 1_555 136.3 ?
5 O4 ? A DT 5 ? A DT 5 ? 1_555 BA ? D BA . ? A BA 103 ? 1_555 O ? E HOH . ? A HOH 212 ? 1_555 151.6 ?
6 O ? E HOH . ? A HOH 210 ? 1_555 BA ? D BA . ? A BA 103 ? 1_555 O ? E HOH . ? A HOH 212 ? 1_555 86.7 ?
7 O6 ? A DG 4 ? A DG 4 ? 1_555 BA ? D BA . ? A BA 103 ? 1_555 O ? E HOH . ? A HOH 213 ? 1_555 127.3 ?
8 O4 ? A DT 5 ? A DT 5 ? 1_555 BA ? D BA . ? A BA 103 ? 1_555 O ? E HOH . ? A HOH 213 ? 1_555 103.7 ?
9 O ? E HOH . ? A HOH 210 ? 1_555 BA ? D BA . ? A BA 103 ? 1_555 O ? E HOH . ? A HOH 213 ? 1_555 73.0 ?
10 O ? E HOH . ? A HOH 212 ? 1_555 BA ? D BA . ? A BA 103 ? 1_555 O ? E HOH . ? A HOH 213 ? 1_555 69.6 ?
#
loop_
_struct_site.id
_struct_site.pdbx_evidence_code
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_struct_site.pdbx_auth_ins_code
_struct_site.pdbx_num_residues
_struct_site.details
AC1 Software A RKP 101 ? 9 'BINDING SITE FOR RESIDUE RKP A 101'
AC2 Software A RKP 102 ? 8 'BINDING SITE FOR RESIDUE RKP A 102'
AC3 Software A BA 103 ? 8 'BINDING SITE FOR RESIDUE BA A 103'
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 9 DT A 1 ? DT A 1 . ? 3_544 ?
2 AC1 9 DC A 2 ? DC A 2 . ? 3_544 ?
3 AC1 9 DG A 3 ? DG A 3 . ? 1_555 ?
4 AC1 9 DG A 3 ? DG A 3 . ? 3_544 ?
5 AC1 9 DG A 4 ? DG A 4 . ? 1_555 ?
6 AC1 9 DC A 7 ? DC A 7 . ? 7_555 ?
7 AC1 9 DC A 8 ? DC A 8 . ? 7_555 ?
8 AC1 9 DG A 9 ? DG A 9 . ? 5_544 ?
9 AC1 9 DA A 10 ? DA A 10 . ? 5_544 ?
10 AC2 8 DG A 4 ? DG A 4 . ? 7_555 ?
11 AC2 8 DG A 4 ? DG A 4 . ? 1_555 ?
12 AC2 8 DT A 5 ? DT A 5 . ? 1_555 ?
13 AC2 8 DT A 5 ? DT A 5 . ? 7_555 ?
14 AC2 8 DA A 6 ? DA A 6 . ? 7_555 ?
15 AC2 8 DA A 6 ? DA A 6 . ? 1_555 ?
16 AC2 8 DC A 7 ? DC A 7 . ? 7_555 ?
17 AC2 8 DC A 7 ? DC A 7 . ? 1_555 ?
18 AC3 8 DG A 3 ? DG A 3 . ? 1_555 ?
19 AC3 8 DG A 4 ? DG A 4 . ? 1_555 ?
20 AC3 8 DT A 5 ? DT A 5 . ? 1_555 ?
21 AC3 8 HOH E . ? HOH A 210 . ? 1_555 ?
22 AC3 8 HOH E . ? HOH A 211 . ? 1_555 ?
23 AC3 8 HOH E . ? HOH A 212 . ? 1_555 ?
24 AC3 8 HOH E . ? HOH A 213 . ? 1_555 ?
25 AC3 8 HOH E . ? HOH A 218 . ? 1_555 ?
#
_pdbx_validate_symm_contact.id 1
_pdbx_validate_symm_contact.PDB_model_num 1
_pdbx_validate_symm_contact.auth_atom_id_1 O4
_pdbx_validate_symm_contact.auth_asym_id_1 A
_pdbx_validate_symm_contact.auth_comp_id_1 DT
_pdbx_validate_symm_contact.auth_seq_id_1 1
_pdbx_validate_symm_contact.PDB_ins_code_1 ?
_pdbx_validate_symm_contact.label_alt_id_1 ?
_pdbx_validate_symm_contact.site_symmetry_1 1_555
_pdbx_validate_symm_contact.auth_atom_id_2 N1
_pdbx_validate_symm_contact.auth_asym_id_2 A
_pdbx_validate_symm_contact.auth_comp_id_2 DA
_pdbx_validate_symm_contact.auth_seq_id_2 10
_pdbx_validate_symm_contact.PDB_ins_code_2 ?
_pdbx_validate_symm_contact.label_alt_id_2 ?
_pdbx_validate_symm_contact.site_symmetry_2 7_555
_pdbx_validate_symm_contact.dist 1.97
#
loop_
_pdbx_struct_special_symmetry.id
_pdbx_struct_special_symmetry.PDB_model_num
_pdbx_struct_special_symmetry.auth_asym_id
_pdbx_struct_special_symmetry.auth_comp_id
_pdbx_struct_special_symmetry.auth_seq_id
_pdbx_struct_special_symmetry.PDB_ins_code
_pdbx_struct_special_symmetry.label_asym_id
_pdbx_struct_special_symmetry.label_comp_id
_pdbx_struct_special_symmetry.label_seq_id
1 1 A RKP 102 ? C RKP .
2 1 A HOH 217 ? E HOH .
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
BA BA BA N N 1
DA OP3 O N N 2
DA P P N N 3
DA OP1 O N N 4
DA OP2 O N N 5
DA "O5'" O N N 6
DA "C5'" C N N 7
DA "C4'" C N R 8
DA "O4'" O N N 9
DA "C3'" C N S 10
DA "O3'" O N N 11
DA "C2'" C N N 12
DA "C1'" C N R 13
DA N9 N Y N 14
DA C8 C Y N 15
DA N7 N Y N 16
DA C5 C Y N 17
DA C6 C Y N 18
DA N6 N N N 19
DA N1 N Y N 20
DA C2 C Y N 21
DA N3 N Y N 22
DA C4 C Y N 23
DA HOP3 H N N 24
DA HOP2 H N N 25
DA "H5'" H N N 26
DA "H5''" H N N 27
DA "H4'" H N N 28
DA "H3'" H N N 29
DA "HO3'" H N N 30
DA "H2'" H N N 31
DA "H2''" H N N 32
DA "H1'" H N N 33
DA H8 H N N 34
DA H61 H N N 35
DA H62 H N N 36
DA H2 H N N 37
DC OP3 O N N 38
DC P P N N 39
DC OP1 O N N 40
DC OP2 O N N 41
DC "O5'" O N N 42
DC "C5'" C N N 43
DC "C4'" C N R 44
DC "O4'" O N N 45
DC "C3'" C N S 46
DC "O3'" O N N 47
DC "C2'" C N N 48
DC "C1'" C N R 49
DC N1 N N N 50
DC C2 C N N 51
DC O2 O N N 52
DC N3 N N N 53
DC C4 C N N 54
DC N4 N N N 55
DC C5 C N N 56
DC C6 C N N 57
DC HOP3 H N N 58
DC HOP2 H N N 59
DC "H5'" H N N 60
DC "H5''" H N N 61
DC "H4'" H N N 62
DC "H3'" H N N 63
DC "HO3'" H N N 64
DC "H2'" H N N 65
DC "H2''" H N N 66
DC "H1'" H N N 67
DC H41 H N N 68
DC H42 H N N 69
DC H5 H N N 70
DC H6 H N N 71
DG OP3 O N N 72
DG P P N N 73
DG OP1 O N N 74
DG OP2 O N N 75
DG "O5'" O N N 76
DG "C5'" C N N 77
DG "C4'" C N R 78
DG "O4'" O N N 79
DG "C3'" C N S 80
DG "O3'" O N N 81
DG "C2'" C N N 82
DG "C1'" C N R 83
DG N9 N Y N 84
DG C8 C Y N 85
DG N7 N Y N 86
DG C5 C Y N 87
DG C6 C N N 88
DG O6 O N N 89
DG N1 N N N 90
DG C2 C N N 91
DG N2 N N N 92
DG N3 N N N 93
DG C4 C Y N 94
DG HOP3 H N N 95
DG HOP2 H N N 96
DG "H5'" H N N 97
DG "H5''" H N N 98
DG "H4'" H N N 99
DG "H3'" H N N 100
DG "HO3'" H N N 101
DG "H2'" H N N 102
DG "H2''" H N N 103
DG "H1'" H N N 104
DG H8 H N N 105
DG H1 H N N 106
DG H21 H N N 107
DG H22 H N N 108
DT OP3 O N N 109
DT P P N N 110
DT OP1 O N N 111
DT OP2 O N N 112
DT "O5'" O N N 113
DT "C5'" C N N 114
DT "C4'" C N R 115
DT "O4'" O N N 116
DT "C3'" C N S 117
DT "O3'" O N N 118
DT "C2'" C N N 119
DT "C1'" C N R 120
DT N1 N N N 121
DT C2 C N N 122
DT O2 O N N 123
DT N3 N N N 124
DT C4 C N N 125
DT O4 O N N 126
DT C5 C N N 127
DT C7 C N N 128
DT C6 C N N 129
DT HOP3 H N N 130
DT HOP2 H N N 131
DT "H5'" H N N 132
DT "H5''" H N N 133
DT "H4'" H N N 134
DT "H3'" H N N 135
DT "HO3'" H N N 136
DT "H2'" H N N 137
DT "H2''" H N N 138
DT "H1'" H N N 139
DT H3 H N N 140
DT H71 H N N 141
DT H72 H N N 142
DT H73 H N N 143
DT H6 H N N 144
HOH O O N N 145
HOH H1 H N N 146
HOH H2 H N N 147
RKP RU RU N N 148
RKP C1 C Y N 149
RKP N1 N Y N 150
RKP C2 C Y N 151
RKP N2 N Y N 152
RKP C3 C Y N 153
RKP N3 N Y N 154
RKP C4 C Y N 155
RKP N4 N Y N 156
RKP C5 C Y N 157
RKP N5 N Y N 158
RKP C6 C Y N 159
RKP C7 C Y N 160
RKP C8 C Y N 161
RKP N8 N Y N 162
RKP C9 C Y N 163
RKP N9 N Y N 164
RKP C10 C Y N 165
RKP C11 C Y N 166
RKP C12 C Y N 167
RKP N12 N Y N 168
RKP C13 C Y N 169
RKP C14 C Y N 170
RKP C15 C Y N 171
RKP C16 C Y N 172
RKP C17 C Y N 173
RKP C18 C Y N 174
RKP C19 C Y N 175
RKP C20 C Y N 176
RKP C21 C Y N 177
RKP C22 C Y N 178
RKP C23 C Y N 179
RKP C24 C Y N 180
RKP C25 C Y N 181
RKP C26 C Y N 182
RKP C27 C Y N 183
RKP C28 C Y N 184
RKP C29 C Y N 185
RKP C30 C Y N 186
RKP C31 C Y N 187
RKP C32 C Y N 188
RKP C33 C Y N 189
RKP C34 C Y N 190
RKP C35 C Y N 191
RKP C36 C Y N 192
RKP C37 C Y N 193
RKP C38 C Y N 194
RKP C41 C Y N 195
RKP C42 C Y N 196
RKP C43 C Y N 197
RKP C44 C Y N 198
RKP H2 H N N 199
RKP H3 H N N 200
RKP H4 H N N 201
RKP H9 H N N 202
RKP H11 H N N 203
RKP H12 H N N 204
RKP H14 H N N 205
RKP H16 H N N 206
RKP H17 H N N 207
RKP H18 H N N 208
RKP H20 H N N 209
RKP H21 H N N 210
RKP H23 H N N 211
RKP H24 H N N 212
RKP H27 H N N 213
RKP H28 H N N 214
RKP H30 H N N 215
RKP H31 H N N 216
RKP H33 H N N 217
RKP H34 H N N 218
RKP H37 H N N 219
RKP H38 H N N 220
RKP H41 H N N 221
RKP H42 H N N 222
RKP H43 H N N 223
RKP H44 H N N 224
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DA OP3 P sing N N 1
DA OP3 HOP3 sing N N 2
DA P OP1 doub N N 3
DA P OP2 sing N N 4
DA P "O5'" sing N N 5
DA OP2 HOP2 sing N N 6
DA "O5'" "C5'" sing N N 7
DA "C5'" "C4'" sing N N 8
DA "C5'" "H5'" sing N N 9
DA "C5'" "H5''" sing N N 10
DA "C4'" "O4'" sing N N 11
DA "C4'" "C3'" sing N N 12
DA "C4'" "H4'" sing N N 13
DA "O4'" "C1'" sing N N 14
DA "C3'" "O3'" sing N N 15
DA "C3'" "C2'" sing N N 16
DA "C3'" "H3'" sing N N 17
DA "O3'" "HO3'" sing N N 18
DA "C2'" "C1'" sing N N 19
DA "C2'" "H2'" sing N N 20
DA "C2'" "H2''" sing N N 21
DA "C1'" N9 sing N N 22
DA "C1'" "H1'" sing N N 23
DA N9 C8 sing Y N 24
DA N9 C4 sing Y N 25
DA C8 N7 doub Y N 26
DA C8 H8 sing N N 27
DA N7 C5 sing Y N 28
DA C5 C6 sing Y N 29
DA C5 C4 doub Y N 30
DA C6 N6 sing N N 31
DA C6 N1 doub Y N 32
DA N6 H61 sing N N 33
DA N6 H62 sing N N 34
DA N1 C2 sing Y N 35
DA C2 N3 doub Y N 36
DA C2 H2 sing N N 37
DA N3 C4 sing Y N 38
DC OP3 P sing N N 39
DC OP3 HOP3 sing N N 40
DC P OP1 doub N N 41
DC P OP2 sing N N 42
DC P "O5'" sing N N 43
DC OP2 HOP2 sing N N 44
DC "O5'" "C5'" sing N N 45
DC "C5'" "C4'" sing N N 46
DC "C5'" "H5'" sing N N 47
DC "C5'" "H5''" sing N N 48
DC "C4'" "O4'" sing N N 49
DC "C4'" "C3'" sing N N 50
DC "C4'" "H4'" sing N N 51
DC "O4'" "C1'" sing N N 52
DC "C3'" "O3'" sing N N 53
DC "C3'" "C2'" sing N N 54
DC "C3'" "H3'" sing N N 55
DC "O3'" "HO3'" sing N N 56
DC "C2'" "C1'" sing N N 57
DC "C2'" "H2'" sing N N 58
DC "C2'" "H2''" sing N N 59
DC "C1'" N1 sing N N 60
DC "C1'" "H1'" sing N N 61
DC N1 C2 sing N N 62
DC N1 C6 sing N N 63
DC C2 O2 doub N N 64
DC C2 N3 sing N N 65
DC N3 C4 doub N N 66
DC C4 N4 sing N N 67
DC C4 C5 sing N N 68
DC N4 H41 sing N N 69
DC N4 H42 sing N N 70
DC C5 C6 doub N N 71
DC C5 H5 sing N N 72
DC C6 H6 sing N N 73
DG OP3 P sing N N 74
DG OP3 HOP3 sing N N 75
DG P OP1 doub N N 76
DG P OP2 sing N N 77
DG P "O5'" sing N N 78
DG OP2 HOP2 sing N N 79
DG "O5'" "C5'" sing N N 80
DG "C5'" "C4'" sing N N 81
DG "C5'" "H5'" sing N N 82
DG "C5'" "H5''" sing N N 83
DG "C4'" "O4'" sing N N 84
DG "C4'" "C3'" sing N N 85
DG "C4'" "H4'" sing N N 86
DG "O4'" "C1'" sing N N 87
DG "C3'" "O3'" sing N N 88
DG "C3'" "C2'" sing N N 89
DG "C3'" "H3'" sing N N 90
DG "O3'" "HO3'" sing N N 91
DG "C2'" "C1'" sing N N 92
DG "C2'" "H2'" sing N N 93
DG "C2'" "H2''" sing N N 94
DG "C1'" N9 sing N N 95
DG "C1'" "H1'" sing N N 96
DG N9 C8 sing Y N 97
DG N9 C4 sing Y N 98
DG C8 N7 doub Y N 99
DG C8 H8 sing N N 100
DG N7 C5 sing Y N 101
DG C5 C6 sing N N 102
DG C5 C4 doub Y N 103
DG C6 O6 doub N N 104
DG C6 N1 sing N N 105
DG N1 C2 sing N N 106
DG N1 H1 sing N N 107
DG C2 N2 sing N N 108
DG C2 N3 doub N N 109
DG N2 H21 sing N N 110
DG N2 H22 sing N N 111
DG N3 C4 sing N N 112
DT OP3 P sing N N 113
DT OP3 HOP3 sing N N 114
DT P OP1 doub N N 115
DT P OP2 sing N N 116
DT P "O5'" sing N N 117
DT OP2 HOP2 sing N N 118
DT "O5'" "C5'" sing N N 119
DT "C5'" "C4'" sing N N 120
DT "C5'" "H5'" sing N N 121
DT "C5'" "H5''" sing N N 122
DT "C4'" "O4'" sing N N 123
DT "C4'" "C3'" sing N N 124
DT "C4'" "H4'" sing N N 125
DT "O4'" "C1'" sing N N 126
DT "C3'" "O3'" sing N N 127
DT "C3'" "C2'" sing N N 128
DT "C3'" "H3'" sing N N 129
DT "O3'" "HO3'" sing N N 130
DT "C2'" "C1'" sing N N 131
DT "C2'" "H2'" sing N N 132
DT "C2'" "H2''" sing N N 133
DT "C1'" N1 sing N N 134
DT "C1'" "H1'" sing N N 135
DT N1 C2 sing N N 136
DT N1 C6 sing N N 137
DT C2 O2 doub N N 138
DT C2 N3 sing N N 139
DT N3 C4 sing N N 140
DT N3 H3 sing N N 141
DT C4 O4 doub N N 142
DT C4 C5 sing N N 143
DT C5 C7 sing N N 144
DT C5 C6 doub N N 145
DT C7 H71 sing N N 146
DT C7 H72 sing N N 147
DT C7 H73 sing N N 148
DT C6 H6 sing N N 149
HOH O H1 sing N N 150
HOH O H2 sing N N 151
RKP C1 N2 sing Y N 152
RKP C1 C5 doub Y N 153
RKP C1 C10 sing Y N 154
RKP N1 C10 sing Y N 155
RKP N1 C12 doub Y N 156
RKP C2 N2 doub Y N 157
RKP C2 C3 sing Y N 158
RKP C3 C4 doub Y N 159
RKP N3 C6 sing Y N 160
RKP N3 C15 doub Y N 161
RKP C4 C5 sing Y N 162
RKP N4 C7 sing Y N 163
RKP N4 C13 doub Y N 164
RKP C5 C6 sing Y N 165
RKP N5 C19 sing Y N 166
RKP N5 C20 doub Y N 167
RKP C6 C7 doub Y N 168
RKP C7 C8 sing Y N 169
RKP C8 C9 sing Y N 170
RKP C8 C10 doub Y N 171
RKP N8 C26 sing Y N 172
RKP N8 C28 doub Y N 173
RKP C9 C11 doub Y N 174
RKP N9 C29 sing Y N 175
RKP N9 C30 doub Y N 176
RKP C11 C12 sing Y N 177
RKP N12 C36 sing Y N 178
RKP N12 C38 doub Y N 179
RKP C13 C14 sing Y N 180
RKP C13 C15 sing Y N 181
RKP C14 C18 doub Y N 182
RKP C15 C16 sing Y N 183
RKP C16 C17 doub Y N 184
RKP C17 C18 sing Y N 185
RKP C19 C22 doub Y N 186
RKP C19 C26 sing Y N 187
RKP C20 C21 sing Y N 188
RKP C21 C41 doub Y N 189
RKP C22 C23 sing Y N 190
RKP C22 C41 sing Y N 191
RKP C23 C24 doub Y N 192
RKP C24 C25 sing Y N 193
RKP C25 C26 doub Y N 194
RKP C25 C42 sing Y N 195
RKP C27 C28 sing Y N 196
RKP C27 C42 doub Y N 197
RKP C29 C32 doub Y N 198
RKP C29 C36 sing Y N 199
RKP C30 C31 sing Y N 200
RKP C31 C43 doub Y N 201
RKP C32 C33 sing Y N 202
RKP C32 C43 sing Y N 203
RKP C33 C34 doub Y N 204
RKP C34 C35 sing Y N 205
RKP C35 C36 doub Y N 206
RKP C35 C44 sing Y N 207
RKP C37 C38 sing Y N 208
RKP C37 C44 doub Y N 209
RKP C2 H2 sing N N 210
RKP C3 H3 sing N N 211
RKP C4 H4 sing N N 212
RKP C9 H9 sing N N 213
RKP C11 H11 sing N N 214
RKP C12 H12 sing N N 215
RKP C14 H14 sing N N 216
RKP C16 H16 sing N N 217
RKP C17 H17 sing N N 218
RKP C18 H18 sing N N 219
RKP C20 H20 sing N N 220
RKP C21 H21 sing N N 221
RKP C23 H23 sing N N 222
RKP C24 H24 sing N N 223
RKP C27 H27 sing N N 224
RKP C28 H28 sing N N 225
RKP C30 H30 sing N N 226
RKP C31 H31 sing N N 227
RKP C33 H33 sing N N 228
RKP C34 H34 sing N N 229
RKP C37 H37 sing N N 230
RKP C38 H38 sing N N 231
RKP C41 H41 sing N N 232
RKP C42 H42 sing N N 233
RKP C43 H43 sing N N 234
RKP C44 H44 sing N N 235
RKP RU N1 sing N N 236
RKP RU N2 sing N N 237
RKP RU N5 sing N N 238
RKP RU N8 sing N N 239
RKP RU N9 sing N N 240
RKP RU N12 sing N N 241
#
_ndb_struct_conf_na.entry_id 4LY2
_ndb_struct_conf_na.feature 'b-form double helix'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A DC 2 1_555 A DG 9 7_555 0.367 -0.143 0.047 -8.786 4.702 -0.600 1 A_DC2:DG9_A A 2 ? A 9 ? 19 1
1 A DG 3 1_555 A DC 8 7_555 -0.082 -0.077 0.210 20.172 -8.305 -2.440 2 A_DG3:DC8_A A 3 ? A 8 ? 19 1
1 A DG 4 1_555 A DC 7 7_555 -0.203 -0.133 -0.105 -8.579 5.924 -2.982 3 A_DG4:DC7_A A 4 ? A 7 ? 19 1
1 A DT 5 1_555 A DA 6 7_555 0.200 -0.164 -0.116 17.348 12.671 4.168 4 A_DT5:DA6_A A 5 ? A 6 ? 20 1
1 A DC 2 1_555 A DG 9 1_555 0.367 -0.143 0.047 -8.786 4.702 -0.600 5 A_DC2:DG9_A A 2 ? A 9 ? 19 1
1 A DG 3 1_555 A DC 8 1_555 -0.082 -0.077 0.210 20.172 -8.305 -2.440 6 A_DG3:DC8_A A 3 ? A 8 ? 19 1
1 A DG 4 1_555 A DC 7 1_555 -0.203 -0.133 -0.105 -8.579 5.924 -2.982 7 A_DG4:DC7_A A 4 ? A 7 ? 19 1
1 A DT 5 1_555 A DA 6 1_555 0.200 -0.164 -0.116 17.348 12.671 4.168 8 A_DT5:DA6_A A 5 ? A 6 ? 20 1
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A DC 2 1_555 A DG 9 7_555 A DG 3 1_555 A DC 8 7_555 -0.377 1.657 2.791 0.556 2.237 22.277 3.538 1.153 2.930 5.771 -1.435
22.394 1 AA_DC2DG3:DC8DG9_AA A 2 ? A 9 ? A 3 ? A 8 ?
1 A DG 3 1_555 A DC 8 7_555 A DG 4 1_555 A DC 7 7_555 0.026 0.762 5.016 -2.103 50.336 15.888 -5.097 -0.278 2.285 73.562 3.073
52.669 2 AA_DG3DG4:DC7DC8_AA A 3 ? A 8 ? A 4 ? A 7 ?
1 A DG 4 1_555 A DC 7 7_555 A DT 5 1_555 A DA 6 7_555 0.818 -0.053 2.748 -3.013 5.592 19.368 -2.209 -3.422 2.480 16.071 8.660
20.374 3 AA_DG4DT5:DA6DC7_AA A 4 ? A 7 ? A 5 ? A 6 ?
1 A DC 2 1_555 A DG 9 1_555 A DG 3 1_555 A DC 8 1_555 -0.377 1.657 2.791 0.556 2.237 22.277 3.538 1.153 2.930 5.771 -1.435
22.394 4 AA_DC2DG3:DC8DG9_AA A 2 ? A 9 ? A 3 ? A 8 ?
1 A DG 3 1_555 A DC 8 1_555 A DG 4 1_555 A DC 7 1_555 0.026 0.762 5.016 -2.103 50.336 15.888 -5.097 -0.278 2.285 73.562 3.073
52.669 5 AA_DG3DG4:DC7DC8_AA A 3 ? A 8 ? A 4 ? A 7 ?
1 A DG 4 1_555 A DC 7 1_555 A DT 5 1_555 A DA 6 1_555 0.818 -0.053 2.748 -3.013 5.592 19.368 -2.209 -3.422 2.480 16.071 8.660
20.374 6 AA_DG4DT5:DA6DC7_AA A 4 ? A 7 ? A 5 ? A 6 ?
#
_atom_sites.entry_id 4LY2
_atom_sites.fract_transf_matrix[1][1] 0.019066
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] -0.000000
_atom_sites.fract_transf_matrix[2][2] 0.019066
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] -0.000000
_atom_sites.fract_transf_matrix[3][3] 0.030694
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
BA
C
N
O
P
RU
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 O "O5'" . DT A 1 1 ? 24.524 17.415 14.196 1.00 110.51 ? 1 DT A "O5'" 1
ATOM 2 C "C5'" . DT A 1 1 ? 24.043 16.799 12.978 1.00 120.07 ? 1 DT A "C5'" 1
ATOM 3 C "C4'" . DT A 1 1 ? 25.190 16.304 12.121 1.00 129.03 ? 1 DT A "C4'" 1
ATOM 4 O "O4'" . DT A 1 1 ? 26.299 15.894 12.961 1.00 130.92 ? 1 DT A "O4'" 1
ATOM 5 C "C3'" . DT A 1 1 ? 24.897 15.098 11.214 1.00 118.53 ? 1 DT A "C3'" 1
ATOM 6 O "O3'" . DT A 1 1 ? 24.281 15.437 9.948 1.00 95.00 ? 1 DT A "O3'" 1
ATOM 7 C "C2'" . DT A 1 1 ? 26.258 14.425 11.111 1.00 111.37 ? 1 DT A "C2'" 1
ATOM 8 C "C1'" . DT A 1 1 ? 26.817 14.649 12.503 1.00 117.32 ? 1 DT A "C1'" 1
ATOM 9 N N1 . DT A 1 1 ? 26.377 13.602 13.436 1.00 108.85 ? 1 DT A N1 1
ATOM 10 C C2 . DT A 1 1 ? 27.207 12.516 13.569 1.00 85.68 ? 1 DT A C2 1
ATOM 11 O O2 . DT A 1 1 ? 28.274 12.423 12.981 1.00 83.55 ? 1 DT A O2 1
ATOM 12 N N3 . DT A 1 1 ? 26.739 11.540 14.417 1.00 71.46 ? 1 DT A N3 1
ATOM 13 C C4 . DT A 1 1 ? 25.554 11.551 15.125 1.00 72.76 ? 1 DT A C4 1
ATOM 14 O O4 . DT A 1 1 ? 25.277 10.615 15.856 1.00 67.91 ? 1 DT A O4 1
ATOM 15 C C5 . DT A 1 1 ? 24.730 12.722 14.937 1.00 81.70 ? 1 DT A C5 1
ATOM 16 C C7 . DT A 1 1 ? 23.424 12.817 15.659 1.00 82.34 ? 1 DT A C7 1
ATOM 17 C C6 . DT A 1 1 ? 25.168 13.669 14.098 1.00 95.88 ? 1 DT A C6 1
ATOM 18 P P . DC A 1 2 ? 25.182 15.754 8.641 1.00 85.51 ? 2 DC A P 1
ATOM 19 O OP1 . DC A 1 2 ? 26.530 16.205 9.099 1.00 92.71 ? 2 DC A OP1 1
ATOM 20 O OP2 . DC A 1 2 ? 24.415 16.588 7.685 1.00 71.32 ? 2 DC A OP2 1
ATOM 21 O "O5'" . DC A 1 2 ? 25.265 14.343 7.921 1.00 66.02 ? 2 DC A "O5'" 1
ATOM 22 C "C5'" . DC A 1 2 ? 26.428 14.006 7.180 1.00 48.55 ? 2 DC A "C5'" 1
ATOM 23 C "C4'" . DC A 1 2 ? 26.134 12.746 6.424 1.00 41.44 ? 2 DC A "C4'" 1
ATOM 24 O "O4'" . DC A 1 2 ? 25.489 11.863 7.335 1.00 35.21 ? 2 DC A "O4'" 1
ATOM 25 C "C3'" . DC A 1 2 ? 25.158 12.942 5.282 1.00 37.26 ? 2 DC A "C3'" 1
ATOM 26 O "O3'" . DC A 1 2 ? 25.962 13.210 4.125 1.00 39.17 ? 2 DC A "O3'" 1
ATOM 27 C "C2'" . DC A 1 2 ? 24.380 11.644 5.257 1.00 35.94 ? 2 DC A "C2'" 1
ATOM 28 C "C1'" . DC A 1 2 ? 24.579 11.042 6.634 1.00 35.19 ? 2 DC A "C1'" 1
ATOM 29 N N1 . DC A 1 2 ? 23.386 10.970 7.458 1.00 33.32 ? 2 DC A N1 1
ATOM 30 C C2 . DC A 1 2 ? 23.078 9.766 8.101 1.00 35.08 ? 2 DC A C2 1
ATOM 31 O O2 . DC A 1 2 ? 23.790 8.765 7.885 1.00 32.71 ? 2 DC A O2 1
ATOM 32 N N3 . DC A 1 2 ? 22.011 9.723 8.935 1.00 32.41 ? 2 DC A N3 1
ATOM 33 C C4 . DC A 1 2 ? 21.317 10.836 9.185 1.00 31.34 ? 2 DC A C4 1
ATOM 34 N N4 . DC A 1 2 ? 20.297 10.758 10.029 1.00 33.01 ? 2 DC A N4 1
ATOM 35 C C5 . DC A 1 2 ? 21.637 12.079 8.572 1.00 32.09 ? 2 DC A C5 1
ATOM 36 C C6 . DC A 1 2 ? 22.686 12.107 7.744 1.00 33.04 ? 2 DC A C6 1
ATOM 37 P P . DG A 1 3 ? 25.309 13.490 2.748 1.00 39.54 ? 3 DG A P 1
ATOM 38 O OP1 . DG A 1 3 ? 26.324 14.044 1.864 1.00 48.57 ? 3 DG A OP1 1
ATOM 39 O OP2 . DG A 1 3 ? 24.021 14.195 2.968 1.00 47.00 ? 3 DG A OP2 1
ATOM 40 O "O5'" . DG A 1 3 ? 25.072 12.035 2.160 1.00 39.25 ? 3 DG A "O5'" 1
ATOM 41 C "C5'" . DG A 1 3 ? 26.177 11.207 1.747 1.00 37.13 ? 3 DG A "C5'" 1
ATOM 42 C "C4'" . DG A 1 3 ? 25.725 9.784 1.513 1.00 35.35 ? 3 DG A "C4'" 1
ATOM 43 O "O4'" . DG A 1 3 ? 25.163 9.239 2.718 1.00 35.26 ? 3 DG A "O4'" 1
ATOM 44 C "C3'" . DG A 1 3 ? 24.617 9.652 0.486 1.00 37.34 ? 3 DG A "C3'" 1
ATOM 45 O "O3'" . DG A 1 3 ? 25.234 9.471 -0.782 1.00 44.11 ? 3 DG A "O3'" 1
ATOM 46 C "C2'" . DG A 1 3 ? 23.874 8.409 0.943 1.00 33.30 ? 3 DG A "C2'" 1
ATOM 47 C "C1'" . DG A 1 3 ? 24.025 8.448 2.438 1.00 30.24 ? 3 DG A "C1'" 1
ATOM 48 N N9 . DG A 1 3 ? 22.919 9.007 3.187 1.00 27.77 ? 3 DG A N9 1
ATOM 49 C C8 . DG A 1 3 ? 22.333 10.236 3.057 1.00 28.89 ? 3 DG A C8 1
ATOM 50 N N7 . DG A 1 3 ? 21.398 10.451 3.940 1.00 30.12 ? 3 DG A N7 1
ATOM 51 C C5 . DG A 1 3 ? 21.413 9.311 4.730 1.00 29.49 ? 3 DG A C5 1
ATOM 52 C C6 . DG A 1 3 ? 20.607 8.945 5.844 1.00 29.52 ? 3 DG A C6 1
ATOM 53 O O6 . DG A 1 3 ? 19.724 9.597 6.408 1.00 26.51 ? 3 DG A O6 1
ATOM 54 N N1 . DG A 1 3 ? 20.984 7.714 6.356 1.00 28.46 ? 3 DG A N1 1
ATOM 55 C C2 . DG A 1 3 ? 21.925 6.887 5.804 1.00 29.50 ? 3 DG A C2 1
ATOM 56 N N2 . DG A 1 3 ? 22.106 5.708 6.402 1.00 32.93 ? 3 DG A N2 1
ATOM 57 N N3 . DG A 1 3 ? 22.681 7.215 4.779 1.00 32.03 ? 3 DG A N3 1
ATOM 58 C C4 . DG A 1 3 ? 22.349 8.417 4.275 1.00 28.98 ? 3 DG A C4 1
ATOM 59 P P . DG A 1 4 ? 24.604 10.149 -2.051 1.00 46.25 ? 4 DG A P 1
ATOM 60 O OP1 . DG A 1 4 ? 25.444 9.813 -3.205 1.00 49.60 ? 4 DG A OP1 1
ATOM 61 O OP2 . DG A 1 4 ? 24.318 11.540 -1.701 1.00 45.27 ? 4 DG A OP2 1
ATOM 62 O "O5'" . DG A 1 4 ? 23.244 9.341 -2.220 1.00 42.75 ? 4 DG A "O5'" 1
ATOM 63 C "C5'" . DG A 1 4 ? 23.265 7.909 -2.373 1.00 39.81 ? 4 DG A "C5'" 1
ATOM 64 C "C4'" . DG A 1 4 ? 21.875 7.388 -2.641 1.00 35.66 ? 4 DG A "C4'" 1
ATOM 65 O "O4'" . DG A 1 4 ? 21.067 7.514 -1.458 1.00 35.41 ? 4 DG A "O4'" 1
ATOM 66 C "C3'" . DG A 1 4 ? 21.128 8.147 -3.719 1.00 33.94 ? 4 DG A "C3'" 1
ATOM 67 O "O3'" . DG A 1 4 ? 20.421 7.149 -4.448 1.00 39.69 ? 4 DG A "O3'" 1
ATOM 68 C "C2'" . DG A 1 4 ? 20.252 9.098 -2.933 1.00 31.95 ? 4 DG A "C2'" 1
ATOM 69 C "C1'" . DG A 1 4 ? 19.913 8.262 -1.741 1.00 30.74 ? 4 DG A "C1'" 1
ATOM 70 N N9 . DG A 1 4 ? 19.626 9.010 -0.548 1.00 28.78 ? 4 DG A N9 1
ATOM 71 C C8 . DG A 1 4 ? 20.294 10.117 -0.104 1.00 26.30 ? 4 DG A C8 1
ATOM 72 N N7 . DG A 1 4 ? 19.871 10.534 1.055 1.00 30.85 ? 4 DG A N7 1
ATOM 73 C C5 . DG A 1 4 ? 18.866 9.639 1.393 1.00 28.36 ? 4 DG A C5 1
ATOM 74 C C6 . DG A 1 4 ? 18.052 9.581 2.537 1.00 28.23 ? 4 DG A C6 1
ATOM 75 O O6 . DG A 1 4 ? 18.053 10.332 3.511 1.00 29.19 ? 4 DG A O6 1
ATOM 76 N N1 . DG A 1 4 ? 17.206 8.483 2.510 1.00 25.96 ? 4 DG A N1 1
ATOM 77 C C2 . DG A 1 4 ? 17.115 7.595 1.478 1.00 27.21 ? 4 DG A C2 1
ATOM 78 N N2 . DG A 1 4 ? 16.218 6.620 1.622 1.00 28.10 ? 4 DG A N2 1
ATOM 79 N N3 . DG A 1 4 ? 17.861 7.651 0.388 1.00 29.49 ? 4 DG A N3 1
ATOM 80 C C4 . DG A 1 4 ? 18.751 8.657 0.444 1.00 26.83 ? 4 DG A C4 1
ATOM 81 P P . DT A 1 5 ? 19.746 7.504 -5.862 1.00 43.65 ? 5 DT A P 1
ATOM 82 O OP1 . DT A 1 5 ? 19.673 6.278 -6.620 1.00 40.41 ? 5 DT A OP1 1
ATOM 83 O OP2 . DT A 1 5 ? 20.414 8.746 -6.422 1.00 48.92 ? 5 DT A OP2 1
ATOM 84 O "O5'" . DT A 1 5 ? 18.256 7.930 -5.472 1.00 41.63 ? 5 DT A "O5'" 1
ATOM 85 C "C5'" . DT A 1 5 ? 17.327 7.052 -4.807 1.00 35.49 ? 5 DT A "C5'" 1
ATOM 86 C "C4'" . DT A 1 5 ? 16.182 7.872 -4.261 1.00 33.16 ? 5 DT A "C4'" 1
ATOM 87 O "O4'" . DT A 1 5 ? 16.650 8.537 -3.088 1.00 32.81 ? 5 DT A "O4'" 1
ATOM 88 C "C3'" . DT A 1 5 ? 15.664 8.997 -5.162 1.00 35.66 ? 5 DT A "C3'" 1
ATOM 89 O "O3'" . DT A 1 5 ? 14.268 8.873 -5.402 1.00 42.71 ? 5 DT A "O3'" 1
ATOM 90 C "C2'" . DT A 1 5 ? 15.874 10.257 -4.343 1.00 34.33 ? 5 DT A "C2'" 1
ATOM 91 C "C1'" . DT A 1 5 ? 15.842 9.655 -2.978 1.00 34.08 ? 5 DT A "C1'" 1
ATOM 92 N N1 . DT A 1 5 ? 16.324 10.466 -1.872 1.00 33.16 ? 5 DT A N1 1
ATOM 93 C C2 . DT A 1 5 ? 15.686 10.289 -0.668 1.00 30.20 ? 5 DT A C2 1
ATOM 94 O O2 . DT A 1 5 ? 14.791 9.475 -0.504 1.00 33.27 ? 5 DT A O2 1
ATOM 95 N N3 . DT A 1 5 ? 16.124 11.111 0.334 1.00 34.27 ? 5 DT A N3 1
ATOM 96 C C4 . DT A 1 5 ? 17.111 12.078 0.249 1.00 32.00 ? 5 DT A C4 1
ATOM 97 O O4 . DT A 1 5 ? 17.397 12.748 1.242 1.00 34.79 ? 5 DT A O4 1
ATOM 98 C C5 . DT A 1 5 ? 17.745 12.196 -1.044 1.00 29.86 ? 5 DT A C5 1
ATOM 99 C C7 . DT A 1 5 ? 18.832 13.203 -1.235 1.00 31.34 ? 5 DT A C7 1
ATOM 100 C C6 . DT A 1 5 ? 17.315 11.406 -2.029 1.00 29.88 ? 5 DT A C6 1
ATOM 101 P P . DA A 1 6 ? 13.700 8.621 -6.895 1.00 42.30 ? 6 DA A P 1
ATOM 102 O OP1 . DA A 1 6 ? 13.983 7.237 -7.239 1.00 45.47 ? 6 DA A OP1 1
ATOM 103 O OP2 . DA A 1 6 ? 14.137 9.725 -7.796 1.00 41.85 ? 6 DA A OP2 1
ATOM 104 O "O5'" . DA A 1 6 ? 12.131 8.817 -6.717 1.00 44.69 ? 6 DA A "O5'" 1
ATOM 105 C "C5'" . DA A 1 6 ? 11.296 7.906 -5.994 1.00 40.53 ? 6 DA A "C5'" 1
ATOM 106 C "C4'" . DA A 1 6 ? 9.908 8.486 -5.995 1.00 36.13 ? 6 DA A "C4'" 1
ATOM 107 O "O4'" . DA A 1 6 ? 9.956 9.679 -5.179 1.00 36.86 ? 6 DA A "O4'" 1
ATOM 108 C "C3'" . DA A 1 6 ? 9.364 8.913 -7.361 1.00 36.60 ? 6 DA A "C3'" 1
ATOM 109 O "O3'" . DA A 1 6 ? 7.968 8.593 -7.364 1.00 44.87 ? 6 DA A "O3'" 1
ATOM 110 C "C2'" . DA A 1 6 ? 9.519 10.423 -7.374 1.00 35.80 ? 6 DA A "C2'" 1
ATOM 111 C "C1'" . DA A 1 6 ? 9.522 10.821 -5.899 1.00 33.51 ? 6 DA A "C1'" 1
ATOM 112 N N9 . DA A 1 6 ? 10.431 11.908 -5.559 1.00 33.23 ? 6 DA A N9 1
ATOM 113 C C8 . DA A 1 6 ? 11.625 12.201 -6.171 1.00 36.91 ? 6 DA A C8 1
ATOM 114 N N7 . DA A 1 6 ? 12.276 13.196 -5.612 1.00 35.31 ? 6 DA A N7 1
ATOM 115 C C5 . DA A 1 6 ? 11.460 13.578 -4.559 1.00 31.06 ? 6 DA A C5 1
ATOM 116 C C6 . DA A 1 6 ? 11.592 14.569 -3.577 1.00 30.67 ? 6 DA A C6 1
ATOM 117 N N6 . DA A 1 6 ? 12.622 15.412 -3.513 1.00 31.34 ? 6 DA A N6 1
ATOM 118 N N1 . DA A 1 6 ? 10.628 14.656 -2.637 1.00 29.94 ? 6 DA A N1 1
ATOM 119 C C2 . DA A 1 6 ? 9.606 13.793 -2.685 1.00 28.24 ? 6 DA A C2 1
ATOM 120 N N3 . DA A 1 6 ? 9.364 12.826 -3.568 1.00 30.73 ? 6 DA A N3 1
ATOM 121 C C4 . DA A 1 6 ? 10.336 12.771 -4.492 1.00 32.41 ? 6 DA A C4 1
ATOM 122 P P . DC A 1 7 ? 7.039 8.689 -8.691 1.00 50.73 ? 7 DC A P 1
ATOM 123 O OP1 . DC A 1 7 ? 6.123 7.524 -8.633 1.00 51.75 ? 7 DC A OP1 1
ATOM 124 O OP2 . DC A 1 7 ? 7.859 8.981 -9.884 1.00 42.38 ? 7 DC A OP2 1
ATOM 125 O "O5'" . DC A 1 7 ? 6.208 10.034 -8.479 1.00 46.90 ? 7 DC A "O5'" 1
ATOM 126 C "C5'" . DC A 1 7 ? 5.037 10.061 -7.654 1.00 41.93 ? 7 DC A "C5'" 1
ATOM 127 C "C4'" . DC A 1 7 ? 4.735 11.478 -7.229 1.00 43.62 ? 7 DC A "C4'" 1
ATOM 128 O "O4'" . DC A 1 7 ? 5.833 12.081 -6.526 1.00 42.06 ? 7 DC A "O4'" 1
ATOM 129 C "C3'" . DC A 1 7 ? 4.500 12.444 -8.367 1.00 43.56 ? 7 DC A "C3'" 1
ATOM 130 O "O3'" . DC A 1 7 ? 3.218 12.188 -8.931 1.00 43.14 ? 7 DC A "O3'" 1
ATOM 131 C "C2'" . DC A 1 7 ? 4.682 13.788 -7.681 1.00 39.06 ? 7 DC A "C2'" 1
ATOM 132 C "C1'" . DC A 1 7 ? 5.508 13.459 -6.431 1.00 40.05 ? 7 DC A "C1'" 1
ATOM 133 N N1 . DC A 1 7 ? 6.764 14.230 -6.286 1.00 33.35 ? 7 DC A N1 1
ATOM 134 C C2 . DC A 1 7 ? 7.001 14.926 -5.100 1.00 31.47 ? 7 DC A C2 1
ATOM 135 O O2 . DC A 1 7 ? 6.142 14.894 -4.202 1.00 31.21 ? 7 DC A O2 1
ATOM 136 N N3 . DC A 1 7 ? 8.149 15.637 -4.969 1.00 29.14 ? 7 DC A N3 1
ATOM 137 C C4 . DC A 1 7 ? 9.032 15.662 -5.964 1.00 30.00 ? 7 DC A C4 1
ATOM 138 N N4 . DC A 1 7 ? 10.142 16.372 -5.796 1.00 30.51 ? 7 DC A N4 1
ATOM 139 C C5 . DC A 1 7 ? 8.832 14.928 -7.166 1.00 31.59 ? 7 DC A C5 1
ATOM 140 C C6 . DC A 1 7 ? 7.690 14.243 -7.288 1.00 32.09 ? 7 DC A C6 1
ATOM 141 P P . DC A 1 8 ? 2.919 12.571 -10.435 1.00 43.12 ? 8 DC A P 1
ATOM 142 O OP1 . DC A 1 8 ? 1.667 11.908 -10.809 1.00 56.69 ? 8 DC A OP1 1
ATOM 143 O OP2 . DC A 1 8 ? 4.110 12.391 -11.242 1.00 44.12 ? 8 DC A OP2 1
ATOM 144 O "O5'" . DC A 1 8 ? 2.731 14.150 -10.356 1.00 43.35 ? 8 DC A "O5'" 1
ATOM 145 C "C5'" . DC A 1 8 ? 1.707 14.760 -9.536 1.00 41.56 ? 8 DC A "C5'" 1
ATOM 146 C "C4'" . DC A 1 8 ? 1.736 16.265 -9.657 1.00 37.21 ? 8 DC A "C4'" 1
ATOM 147 O "O4'" . DC A 1 8 ? 2.848 16.751 -8.906 1.00 35.23 ? 8 DC A "O4'" 1
ATOM 148 C "C3'" . DC A 1 8 ? 1.994 16.771 -11.064 1.00 39.27 ? 8 DC A "C3'" 1
ATOM 149 O "O3'" . DC A 1 8 ? 0.746 17.009 -11.690 1.00 41.83 ? 8 DC A "O3'" 1
ATOM 150 C "C2'" . DC A 1 8 ? 2.752 18.069 -10.848 1.00 38.41 ? 8 DC A "C2'" 1
ATOM 151 C "C1'" . DC A 1 8 ? 3.253 17.993 -9.426 1.00 34.75 ? 8 DC A "C1'" 1
ATOM 152 N N1 . DC A 1 8 ? 4.693 18.047 -9.279 1.00 31.28 ? 8 DC A N1 1
ATOM 153 C C2 . DC A 1 8 ? 5.246 19.030 -8.459 1.00 30.50 ? 8 DC A C2 1
ATOM 154 O O2 . DC A 1 8 ? 4.502 19.882 -7.962 1.00 31.40 ? 8 DC A O2 1
ATOM 155 N N3 . DC A 1 8 ? 6.578 19.043 -8.250 1.00 29.41 ? 8 DC A N3 1
ATOM 156 C C4 . DC A 1 8 ? 7.345 18.106 -8.800 1.00 31.44 ? 8 DC A C4 1
ATOM 157 N N4 . DC A 1 8 ? 8.652 18.143 -8.542 1.00 33.89 ? 8 DC A N4 1
ATOM 158 C C5 . DC A 1 8 ? 6.801 17.068 -9.612 1.00 33.26 ? 8 DC A C5 1
ATOM 159 C C6 . DC A 1 8 ? 5.475 17.056 -9.788 1.00 30.86 ? 8 DC A C6 1
ATOM 160 P P . DG A 1 9 ? 0.678 17.281 -13.237 1.00 40.16 ? 9 DG A P 1
ATOM 161 O OP1 . DG A 1 9 ? -0.705 16.965 -13.654 1.00 48.39 ? 9 DG A OP1 1
ATOM 162 O OP2 . DG A 1 9 ? 1.838 16.649 -13.888 1.00 41.87 ? 9 DG A OP2 1
ATOM 163 O "O5'" . DG A 1 9 ? 0.922 18.837 -13.322 1.00 39.77 ? 9 DG A "O5'" 1
ATOM 164 C "C5'" . DG A 1 9 ? -0.090 19.685 -12.800 1.00 41.61 ? 9 DG A "C5'" 1
ATOM 165 C "C4'" . DG A 1 9 ? 0.475 21.076 -12.750 1.00 45.96 ? 9 DG A "C4'" 1
ATOM 166 O "O4'" . DG A 1 9 ? 1.690 20.972 -11.998 1.00 42.54 ? 9 DG A "O4'" 1
ATOM 167 C "C3'" . DG A 1 9 ? 0.872 21.593 -14.126 1.00 47.14 ? 9 DG A "C3'" 1
ATOM 168 O "O3'" . DG A 1 9 ? 0.085 22.711 -14.524 1.00 58.60 ? 9 DG A "O3'" 1
ATOM 169 C "C2'" . DG A 1 9 ? 2.293 22.079 -13.965 1.00 42.89 ? 9 DG A "C2'" 1
ATOM 170 C "C1'" . DG A 1 9 ? 2.659 21.816 -12.533 1.00 38.68 ? 9 DG A "C1'" 1
ATOM 171 N N9 . DG A 1 9 ? 3.916 21.116 -12.449 1.00 34.54 ? 9 DG A N9 1
ATOM 172 C C8 . DG A 1 9 ? 4.314 20.003 -13.147 1.00 31.07 ? 9 DG A C8 1
ATOM 173 N N7 . DG A 1 9 ? 5.513 19.604 -12.827 1.00 36.40 ? 9 DG A N7 1
ATOM 174 C C5 . DG A 1 9 ? 5.923 20.505 -11.854 1.00 32.52 ? 9 DG A C5 1
ATOM 175 C C6 . DG A 1 9 ? 7.139 20.598 -11.152 1.00 33.10 ? 9 DG A C6 1
ATOM 176 O O6 . DG A 1 9 ? 8.128 19.870 -11.236 1.00 35.86 ? 9 DG A O6 1
ATOM 177 N N1 . DG A 1 9 ? 7.124 21.645 -10.238 1.00 28.83 ? 9 DG A N1 1
ATOM 178 C C2 . DG A 1 9 ? 6.093 22.529 -10.071 1.00 29.51 ? 9 DG A C2 1
ATOM 179 N N2 . DG A 1 9 ? 6.279 23.493 -9.167 1.00 30.51 ? 9 DG A N2 1
ATOM 180 N N3 . DG A 1 9 ? 4.952 22.458 -10.726 1.00 34.20 ? 9 DG A N3 1
ATOM 181 C C4 . DG A 1 9 ? 4.939 21.430 -11.599 1.00 34.46 ? 9 DG A C4 1
ATOM 182 P P . DA A 1 10 ? 0.241 23.267 -16.003 1.00 69.49 ? 10 DA A P 1
ATOM 183 O OP1 . DA A 1 10 ? -1.082 23.790 -16.431 1.00 88.84 ? 10 DA A OP1 1
ATOM 184 O OP2 . DA A 1 10 ? 0.880 22.202 -16.856 1.00 56.24 ? 10 DA A OP2 1
ATOM 185 O "O5'" . DA A 1 10 ? 1.153 24.549 -15.725 1.00 67.94 ? 10 DA A "O5'" 1
ATOM 186 C "C5'" . DA A 1 10 ? 1.940 25.146 -16.768 1.00 55.27 ? 10 DA A "C5'" 1
ATOM 187 C "C4'" . DA A 1 10 ? 2.197 26.606 -16.479 1.00 45.26 ? 10 DA A "C4'" 1
ATOM 188 O "O4'" . DA A 1 10 ? 3.188 26.708 -15.431 1.00 46.59 ? 10 DA A "O4'" 1
ATOM 189 C "C3'" . DA A 1 10 ? 2.756 27.414 -17.655 1.00 42.67 ? 10 DA A "C3'" 1
ATOM 190 O "O3'" . DA A 1 10 ? 1.767 28.225 -18.278 1.00 47.33 ? 10 DA A "O3'" 1
ATOM 191 C "C2'" . DA A 1 10 ? 3.839 28.253 -17.008 1.00 43.47 ? 10 DA A "C2'" 1
ATOM 192 C "C1'" . DA A 1 10 ? 4.360 27.254 -16.013 1.00 47.59 ? 10 DA A "C1'" 1
ATOM 193 N N9 . DA A 1 10 ? 5.076 26.164 -16.685 1.00 50.77 ? 10 DA A N9 1
ATOM 194 C C8 . DA A 1 10 ? 4.638 25.315 -17.681 1.00 48.93 ? 10 DA A C8 1
ATOM 195 N N7 . DA A 1 10 ? 5.543 24.462 -18.085 1.00 46.23 ? 10 DA A N7 1
ATOM 196 C C5 . DA A 1 10 ? 6.649 24.771 -17.313 1.00 45.03 ? 10 DA A C5 1
ATOM 197 C C6 . DA A 1 10 ? 7.916 24.222 -17.260 1.00 42.70 ? 10 DA A C6 1
ATOM 198 N N6 . DA A 1 10 ? 8.307 23.213 -18.038 1.00 50.74 ? 10 DA A N6 1
ATOM 199 N N1 . DA A 1 10 ? 8.790 24.750 -16.377 1.00 47.31 ? 10 DA A N1 1
ATOM 200 C C2 . DA A 1 10 ? 8.388 25.778 -15.604 1.00 42.26 ? 10 DA A C2 1
ATOM 201 N N3 . DA A 1 10 ? 7.216 26.384 -15.567 1.00 37.33 ? 10 DA A N3 1
ATOM 202 C C4 . DA A 1 10 ? 6.379 25.824 -16.455 1.00 42.06 ? 10 DA A C4 1
HETATM 203 RU RU . RKP B 2 . ? 18.080 1.666 1.857 1.00 31.79 ? 101 RKP A RU 1
HETATM 204 C C1 . RKP B 2 . ? 19.219 -0.286 3.514 1.00 31.17 ? 101 RKP A C1 1
HETATM 205 N N1 . RKP B 2 . ? 17.209 -0.041 2.289 1.00 29.47 ? 101 RKP A N1 1
HETATM 206 C C2 . RKP B 2 . ? 20.927 1.341 3.054 1.00 34.82 ? 101 RKP A C2 1
HETATM 207 N N2 . RKP B 2 . ? 19.627 0.815 2.731 1.00 31.90 ? 101 RKP A N2 1
HETATM 208 C C3 . RKP B 2 . ? 21.793 0.624 3.903 1.00 30.80 ? 101 RKP A C3 1
HETATM 209 N N3 . RKP B 2 . ? 20.453 -2.600 5.833 1.00 33.22 ? 101 RKP A N3 1
HETATM 210 C C4 . RKP B 2 . ? 21.345 -0.500 4.538 1.00 29.64 ? 101 RKP A C4 1
HETATM 211 N N4 . RKP B 2 . ? 17.968 -3.642 5.495 1.00 33.98 ? 101 RKP A N4 1
HETATM 212 C C5 . RKP B 2 . ? 20.075 -0.940 4.345 1.00 29.06 ? 101 RKP A C5 1
HETATM 213 N N5 . RKP B 2 . ? 18.401 0.849 0.096 1.00 30.95 ? 101 RKP A N5 1
HETATM 214 C C6 . RKP B 2 . ? 19.619 -2.036 4.994 1.00 30.48 ? 101 RKP A C6 1
HETATM 215 C C7 . RKP B 2 . ? 18.359 -2.527 4.810 1.00 31.45 ? 101 RKP A C7 1
HETATM 216 C C8 . RKP B 2 . ? 17.506 -1.871 3.938 1.00 27.76 ? 101 RKP A C8 1
HETATM 217 N N8 . RKP B 2 . ? 16.528 2.379 0.988 1.00 35.20 ? 101 RKP A N8 1
HETATM 218 C C9 . RKP B 2 . ? 16.254 -2.313 3.703 1.00 24.95 ? 101 RKP A C9 1
HETATM 219 N N9 . RKP B 2 . ? 17.763 2.573 3.600 1.00 31.45 ? 101 RKP A N9 1
HETATM 220 C C10 . RKP B 2 . ? 17.931 -0.751 3.285 1.00 28.12 ? 101 RKP A C10 1
HETATM 221 C C11 . RKP B 2 . ? 15.453 -1.626 2.839 1.00 25.95 ? 101 RKP A C11 1
HETATM 222 C C12 . RKP B 2 . ? 15.905 -0.464 2.220 1.00 28.52 ? 101 RKP A C12 1
HETATM 223 N N12 . RKP B 2 . ? 19.046 3.413 1.514 1.00 31.68 ? 101 RKP A N12 1
HETATM 224 C C13 . RKP B 2 . ? 18.808 -4.203 6.346 1.00 34.28 ? 101 RKP A C13 1
HETATM 225 C C14 . RKP B 2 . ? 18.412 -5.311 7.092 1.00 40.87 ? 101 RKP A C14 1
HETATM 226 C C15 . RKP B 2 . ? 20.087 -3.680 6.503 1.00 34.94 ? 101 RKP A C15 1
HETATM 227 C C16 . RKP B 2 . ? 20.995 -4.233 7.404 1.00 35.13 ? 101 RKP A C16 1
HETATM 228 C C17 . RKP B 2 . ? 20.610 -5.368 8.106 1.00 40.40 ? 101 RKP A C17 1
HETATM 229 C C18 . RKP B 2 . ? 19.316 -5.925 7.977 1.00 39.83 ? 101 RKP A C18 1
HETATM 230 C C19 . RKP B 2 . ? 17.607 1.398 -0.883 1.00 36.31 ? 101 RKP A C19 1
HETATM 231 C C20 . RKP B 2 . ? 19.585 0.248 -0.405 1.00 30.62 ? 101 RKP A C20 1
HETATM 232 C C21 . RKP B 2 . ? 19.669 -0.091 -1.717 1.00 30.26 ? 101 RKP A C21 1
HETATM 233 C C22 . RKP B 2 . ? 17.678 1.084 -2.233 1.00 32.42 ? 101 RKP A C22 1
HETATM 234 C C23 . RKP B 2 . ? 16.720 1.527 -3.147 1.00 32.32 ? 101 RKP A C23 1
HETATM 235 C C24 . RKP B 2 . ? 15.672 2.264 -2.652 1.00 33.57 ? 101 RKP A C24 1
HETATM 236 C C25 . RKP B 2 . ? 15.583 2.582 -1.259 1.00 33.84 ? 101 RKP A C25 1
HETATM 237 C C26 . RKP B 2 . ? 16.547 2.136 -0.350 1.00 35.14 ? 101 RKP A C26 1
HETATM 238 C C27 . RKP B 2 . ? 14.513 3.544 0.617 1.00 30.16 ? 101 RKP A C27 1
HETATM 239 C C28 . RKP B 2 . ? 15.483 3.047 1.486 1.00 31.14 ? 101 RKP A C28 1
HETATM 240 C C29 . RKP B 2 . ? 18.161 3.949 3.565 1.00 31.72 ? 101 RKP A C29 1
HETATM 241 C C30 . RKP B 2 . ? 16.821 2.304 4.553 1.00 32.00 ? 101 RKP A C30 1
HETATM 242 C C31 . RKP B 2 . ? 16.729 3.132 5.642 1.00 28.89 ? 101 RKP A C31 1
HETATM 243 C C32 . RKP B 2 . ? 18.040 4.779 4.639 1.00 30.11 ? 101 RKP A C32 1
HETATM 244 C C33 . RKP B 2 . ? 18.613 6.059 4.639 1.00 30.26 ? 101 RKP A C33 1
HETATM 245 C C34 . RKP B 2 . ? 19.404 6.451 3.578 1.00 28.82 ? 101 RKP A C34 1
HETATM 246 C C35 . RKP B 2 . ? 19.580 5.576 2.518 1.00 31.70 ? 101 RKP A C35 1
HETATM 247 C C36 . RKP B 2 . ? 18.976 4.328 2.508 1.00 29.54 ? 101 RKP A C36 1
HETATM 248 C C37 . RKP B 2 . ? 20.482 5.001 0.397 1.00 32.92 ? 101 RKP A C37 1
HETATM 249 C C38 . RKP B 2 . ? 19.824 3.763 0.473 1.00 32.83 ? 101 RKP A C38 1
HETATM 250 C C41 . RKP B 2 . ? 18.745 0.336 -2.633 1.00 33.60 ? 101 RKP A C41 1
HETATM 251 C C42 . RKP B 2 . ? 14.540 3.297 -0.729 1.00 29.82 ? 101 RKP A C42 1
HETATM 252 C C43 . RKP B 2 . ? 17.262 4.372 5.653 1.00 28.93 ? 101 RKP A C43 1
HETATM 253 C C44 . RKP B 2 . ? 20.371 5.922 1.429 1.00 32.68 ? 101 RKP A C44 1
HETATM 254 RU RU . RKP C 2 . ? 9.481 9.483 0.221 0.50 31.10 ? 102 RKP A RU 1
HETATM 255 C C1 . RKP C 2 . ? 11.252 11.572 0.794 0.50 29.86 ? 102 RKP A C1 1
HETATM 256 N N1 . RKP C 2 . ? 10.753 10.201 -1.080 0.50 30.85 ? 102 RKP A N1 1
HETATM 257 C C2 . RKP C 2 . ? 9.862 11.287 2.711 0.50 28.92 ? 102 RKP A C2 1
HETATM 258 N N2 . RKP C 2 . ? 10.197 10.895 1.395 0.50 29.91 ? 102 RKP A N2 1
HETATM 259 C C3 . RKP C 2 . ? 10.522 12.326 3.340 0.50 28.97 ? 102 RKP A C3 1
HETATM 260 N N3 . RKP C 2 . ? 13.632 14.265 1.318 0.50 33.30 ? 102 RKP A N3 1
HETATM 261 C C4 . RKP C 2 . ? 11.540 12.987 2.676 0.50 29.02 ? 102 RKP A C4 1
HETATM 262 N N4 . RKP C 2 . ? 14.269 13.473 -1.284 0.50 33.79 ? 102 RKP A N4 1
HETATM 263 C C5 . RKP C 2 . ? 11.903 12.618 1.400 0.50 30.77 ? 102 RKP A C5 1
HETATM 264 N N5 . RKP C 2 . ? 8.293 10.717 -0.772 0.50 31.47 ? 102 RKP A N5 1
HETATM 265 C C6 . RKP C 2 . ? 12.949 13.249 0.713 0.50 31.70 ? 102 RKP A C6 1
HETATM 266 C C7 . RKP C 2 . ? 13.272 12.846 -0.595 0.50 31.85 ? 102 RKP A C7 1
HETATM 267 C C8 . RKP C 2 . ? 12.580 11.784 -1.198 0.50 31.07 ? 102 RKP A C8 1
HETATM 268 N N8 . RKP C 2 . ? 8.886 8.221 -1.071 0.50 30.95 ? 102 RKP A N8 1
HETATM 269 C C9 . RKP C 2 . ? 12.870 11.342 -2.470 0.50 29.15 ? 102 RKP A C9 1
HETATM 270 N N9 . RKP C 2 . ? 10.721 8.165 1.198 0.50 31.66 ? 102 RKP A N9 1
HETATM 271 C C10 . RKP C 2 . ? 11.606 11.131 -0.483 0.50 30.50 ? 102 RKP A C10 1
HETATM 272 C C11 . RKP C 2 . ? 12.145 10.305 -3.030 0.50 29.37 ? 102 RKP A C11 1
HETATM 273 C C12 . RKP C 2 . ? 11.188 9.645 -2.290 0.50 29.77 ? 102 RKP A C12 1
HETATM 274 N N12 . RKP C 2 . ? 8.293 8.830 1.602 0.50 29.63 ? 102 RKP A N12 1
HETATM 275 C C13 . RKP C 2 . ? 14.960 14.495 -0.685 0.50 36.02 ? 102 RKP A C13 1
HETATM 276 C C14 . RKP C 2 . ? 15.987 15.143 -1.350 0.50 33.60 ? 102 RKP A C14 1
HETATM 277 C C15 . RKP C 2 . ? 14.637 14.901 0.629 0.50 35.90 ? 102 RKP A C15 1
HETATM 278 C C16 . RKP C 2 . ? 15.346 15.947 1.200 0.50 33.01 ? 102 RKP A C16 1
HETATM 279 C C17 . RKP C 2 . ? 16.367 16.581 0.513 0.50 31.67 ? 102 RKP A C17 1
HETATM 280 C C18 . RKP C 2 . ? 16.680 16.184 -0.754 0.50 32.57 ? 102 RKP A C18 1
HETATM 281 C C19 . RKP C 2 . ? 7.508 10.061 -1.702 0.50 32.65 ? 102 RKP A C19 1
HETATM 282 C C20 . RKP C 2 . ? 7.811 11.989 -0.352 0.50 32.14 ? 102 RKP A C20 1
HETATM 283 C C21 . RKP C 2 . ? 6.911 12.664 -1.187 0.50 30.55 ? 102 RKP A C21 1
HETATM 284 C C22 . RKP C 2 . ? 6.613 10.713 -2.544 0.50 31.21 ? 102 RKP A C22 1
HETATM 285 C C23 . RKP C 2 . ? 6.025 10.009 -3.574 0.50 30.90 ? 102 RKP A C23 1
HETATM 286 C C24 . RKP C 2 . ? 6.418 8.700 -3.783 0.50 31.32 ? 102 RKP A C24 1
HETATM 287 C C25 . RKP C 2 . ? 7.357 8.091 -2.953 0.50 31.12 ? 102 RKP A C25 1
HETATM 288 C C26 . RKP C 2 . ? 7.949 8.760 -1.914 0.50 32.60 ? 102 RKP A C26 1
HETATM 289 C C27 . RKP C 2 . ? 8.705 6.235 -2.311 0.50 31.86 ? 102 RKP A C27 1
HETATM 290 C C28 . RKP C 2 . ? 9.278 6.983 -1.287 0.50 35.03 ? 102 RKP A C28 1
HETATM 291 C C29 . RKP C 2 . ? 10.030 7.397 2.157 0.50 31.00 ? 102 RKP A C29 1
HETATM 292 C C30 . RKP C 2 . ? 11.943 7.593 0.728 0.50 30.87 ? 102 RKP A C30 1
HETATM 293 C C31 . RKP C 2 . ? 12.583 6.645 1.530 0.50 29.91 ? 102 RKP A C31 1
HETATM 294 C C32 . RKP C 2 . ? 10.649 6.456 2.950 0.50 29.53 ? 102 RKP A C32 1
HETATM 295 C C33 . RKP C 2 . ? 9.950 5.897 4.001 0.50 29.14 ? 102 RKP A C33 1
HETATM 296 C C34 . RKP C 2 . ? 8.677 6.356 4.281 0.50 29.06 ? 102 RKP A C34 1
HETATM 297 C C35 . RKP C 2 . ? 8.109 7.340 3.488 0.50 29.82 ? 102 RKP A C35 1
HETATM 298 C C36 . RKP C 2 . ? 8.784 7.884 2.436 0.50 30.75 ? 102 RKP A C36 1
HETATM 299 C C37 . RKP C 2 . ? 6.340 8.826 2.899 0.50 30.50 ? 102 RKP A C37 1
HETATM 300 C C38 . RKP C 2 . ? 7.098 9.339 1.863 0.50 32.24 ? 102 RKP A C38 1
HETATM 301 C C41 . RKP C 2 . ? 6.276 12.028 -2.252 0.50 31.57 ? 102 RKP A C41 1
HETATM 302 C C42 . RKP C 2 . ? 7.749 6.794 -3.149 0.50 33.06 ? 102 RKP A C42 1
HETATM 303 C C43 . RKP C 2 . ? 11.929 6.046 2.606 0.50 30.29 ? 102 RKP A C43 1
HETATM 304 C C44 . RKP C 2 . ? 6.845 7.817 3.722 0.50 31.21 ? 102 RKP A C44 1
HETATM 305 BA BA . BA D 3 . ? 19.679 12.695 3.132 1.00 33.32 ? 103 BA A BA 1
HETATM 306 O O . HOH E 4 . ? 22.046 12.558 -1.039 1.00 40.61 ? 201 HOH A O 1
HETATM 307 O O . HOH E 4 . ? 19.269 12.006 -4.809 1.00 50.22 ? 202 HOH A O 1
HETATM 308 O O . HOH E 4 . ? 17.316 5.390 -1.181 1.00 29.12 ? 203 HOH A O 1
HETATM 309 O O . HOH E 4 . ? 14.804 6.704 -1.290 1.00 33.76 ? 204 HOH A O 1
HETATM 310 O O . HOH E 4 . ? 12.505 6.100 -2.748 1.00 35.53 ? 205 HOH A O 1
HETATM 311 O O . HOH E 4 . ? 10.528 3.856 -0.048 1.00 43.29 ? 206 HOH A O 1
HETATM 312 O O . HOH E 4 . ? 7.865 13.277 -10.151 1.00 44.13 ? 207 HOH A O 1
HETATM 313 O O . HOH E 4 . ? 24.046 3.283 5.685 1.00 28.19 ? 208 HOH A O 1
HETATM 314 O O . HOH E 4 . ? 22.282 -1.083 0.421 1.00 31.89 ? 209 HOH A O 1
HETATM 315 O O . HOH E 4 . ? 19.368 15.124 1.704 1.00 38.14 ? 210 HOH A O 1
HETATM 316 O O . HOH E 4 . ? 18.072 14.249 4.033 1.00 44.19 ? 211 HOH A O 1
HETATM 317 O O . HOH E 4 . ? 21.880 14.024 4.581 1.00 42.53 ? 212 HOH A O 1
HETATM 318 O O . HOH E 4 . ? 22.110 12.986 1.331 1.00 34.29 ? 213 HOH A O 1
HETATM 319 O O . HOH E 4 . ? 27.017 6.541 2.024 1.00 38.83 ? 214 HOH A O 1
HETATM 320 O O . HOH E 4 . ? 19.131 4.350 -2.667 1.00 41.39 ? 215 HOH A O 1
HETATM 321 O O . HOH E 4 . ? 21.714 3.134 -2.136 1.00 36.78 ? 216 HOH A O 1
HETATM 322 O O . HOH E 4 . ? 5.653 5.653 0.000 0.50 68.86 ? 217 HOH A O 1
HETATM 323 O O . HOH E 4 . ? 19.367 12.185 5.231 1.00 43.34 ? 218 HOH A O 1
HETATM 324 O O . HOH E 4 . ? -2.571 14.767 -9.935 1.00 63.23 ? 219 HOH A O 1
HETATM 325 O O . HOH E 4 . ? 21.538 15.162 6.797 1.00 48.80 ? 220 HOH A O 1
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