data_3R86
#
_entry.id 3R86
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.389
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 3R86 pdb_00003r86 10.2210/pdb3r86/pdb
NDB NA1035 ? ?
RCSB RCSB064610 ? ?
WWPDB D_1000064610 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2011-04-06
2 'Structure model' 1 1 2011-07-13
3 'Structure model' 1 2 2018-02-14
4 'Structure model' 1 3 2024-03-20
5 'Structure model' 1 4 2024-04-03
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Experimental preparation'
3 4 'Structure model' 'Data collection'
4 4 'Structure model' 'Database references'
5 4 'Structure model' 'Derived calculations'
6 5 'Structure model' 'Refinement description'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 3 'Structure model' exptl_crystal_grow
2 4 'Structure model' chem_comp_atom
3 4 'Structure model' chem_comp_bond
4 4 'Structure model' database_2
5 4 'Structure model' pdbx_struct_conn_angle
6 4 'Structure model' struct_conn
7 4 'Structure model' struct_site
8 5 'Structure model' pdbx_initial_refinement_model
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 3 'Structure model' '_exptl_crystal_grow.pdbx_details'
2 3 'Structure model' '_exptl_crystal_grow.temp'
3 4 'Structure model' '_database_2.pdbx_DOI'
4 4 'Structure model' '_database_2.pdbx_database_accession'
5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id'
6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id'
7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id'
8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id'
9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id'
10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id'
11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id'
12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id'
13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id'
14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id'
15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id'
16 4 'Structure model' '_pdbx_struct_conn_angle.value'
17 4 'Structure model' '_struct_conn.pdbx_dist_value'
18 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id'
19 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id'
20 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id'
21 4 'Structure model' '_struct_conn.ptnr1_label_asym_id'
22 4 'Structure model' '_struct_conn.ptnr1_label_atom_id'
23 4 'Structure model' '_struct_conn.ptnr1_label_comp_id'
24 4 'Structure model' '_struct_conn.ptnr1_label_seq_id'
25 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id'
26 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id'
27 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id'
28 4 'Structure model' '_struct_conn.ptnr2_label_asym_id'
29 4 'Structure model' '_struct_conn.ptnr2_label_atom_id'
30 4 'Structure model' '_struct_conn.ptnr2_label_comp_id'
31 4 'Structure model' '_struct_site.pdbx_auth_asym_id'
32 4 'Structure model' '_struct_site.pdbx_auth_comp_id'
33 4 'Structure model' '_struct_site.pdbx_auth_seq_id'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 3R86
_pdbx_database_status.recvd_initial_deposition_date 2011-03-23
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site PDBJ
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.SG_entry ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.status_code_nmr_data ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Venkadesh, S.' 1
'Mandal, P.K.' 2
'Gautham, N.' 3
#
_citation.id primary
_citation.title 'Crystal structure of d(CCGGTACCGG)2 as B-DNA duplex'
_citation.journal_abbrev 'To be Published'
_citation.journal_volume ?
_citation.page_first ?
_citation.page_last ?
_citation.year ?
_citation.journal_id_ASTM ?
_citation.country ?
_citation.journal_id_ISSN ?
_citation.journal_id_CSD 0353
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed ?
_citation.pdbx_database_id_DOI ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Venkadesh, S.' 1 ?
primary 'Mandal, P.K.' 2 ?
primary 'Gautham, N.' 3 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn
;DNA (5'-D(*CP*CP*GP*GP*TP*AP*CP*CP*GP*G)-3')
;
3045.992 2 ? ? ? ?
2 non-polymer syn 'COBALT (II) ION' 58.933 3 ? ? ? ?
3 water nat water 18.015 11 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type polydeoxyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code '(DC)(DC)(DG)(DG)(DT)(DA)(DC)(DC)(DG)(DG)'
_entity_poly.pdbx_seq_one_letter_code_can CCGGTACCGG
_entity_poly.pdbx_strand_id A,B
_entity_poly.pdbx_target_identifier ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2 'COBALT (II) ION' CO
3 water HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 DC n
1 2 DC n
1 3 DG n
1 4 DG n
1 5 DT n
1 6 DA n
1 7 DC n
1 8 DC n
1 9 DG n
1 10 DG n
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num ?
_pdbx_entity_src_syn.pdbx_end_seq_num ?
_pdbx_entity_src_syn.organism_scientific ?
_pdbx_entity_src_syn.organism_common_name ?
_pdbx_entity_src_syn.ncbi_taxonomy_id ?
_pdbx_entity_src_syn.details 'Chemically synthesized'
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
CO non-polymer . 'COBALT (II) ION' ? 'Co 2' 58.933
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221
DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208
HOH non-polymer . WATER ? 'H2 O' 18.015
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 DC 1 1 1 DC C A . n
A 1 2 DC 2 2 2 DC C A . n
A 1 3 DG 3 3 3 DG G A . n
A 1 4 DG 4 4 4 DG G A . n
A 1 5 DT 5 5 5 DT T A . n
A 1 6 DA 6 6 6 DA A A . n
A 1 7 DC 7 7 7 DC C A . n
A 1 8 DC 8 8 8 DC C A . n
A 1 9 DG 9 9 9 DG G A . n
A 1 10 DG 10 10 10 DG G A . n
B 1 1 DC 1 1 1 DC C B . n
B 1 2 DC 2 2 2 DC C B . n
B 1 3 DG 3 3 3 DG G B . n
B 1 4 DG 4 4 4 DG G B . n
B 1 5 DT 5 5 5 DT T B . n
B 1 6 DA 6 6 6 DA A B . n
B 1 7 DC 7 7 7 DC C B . n
B 1 8 DC 8 8 8 DC C B . n
B 1 9 DG 9 9 9 DG G B . n
B 1 10 DG 10 10 10 DG G B . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CO 1 11 2 CO CO A .
D 2 CO 1 11 1 CO CO B .
E 2 CO 1 12 3 CO CO B .
F 3 HOH 1 12 5 HOH HOH A .
F 3 HOH 2 13 6 HOH HOH A .
F 3 HOH 3 14 9 HOH HOH A .
F 3 HOH 4 15 10 HOH HOH A .
G 3 HOH 1 13 1 HOH HOH B .
G 3 HOH 2 14 2 HOH HOH B .
G 3 HOH 3 15 3 HOH HOH B .
G 3 HOH 4 16 4 HOH HOH B .
G 3 HOH 5 17 7 HOH HOH B .
G 3 HOH 6 18 8 HOH HOH B .
G 3 HOH 7 19 11 HOH HOH B .
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
_software.date
_software.type
_software.location
_software.language
MxCuBE 'data collection' . ? 1 ? ? ? ?
AMoRE phasing . ? 2 ? ? ? ?
REFMAC refinement 5.5.0109 ? 3 ? ? ? ?
AUTOMAR 'data reduction' . ? 4 ? ? ? ?
#
_cell.entry_id 3R86
_cell.length_a 32.756
_cell.length_b 32.756
_cell.length_c 93.648
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 120.00
_cell.Z_PDB 12
_cell.pdbx_unique_axis ?
_cell.length_a_esd ?
_cell.length_b_esd ?
_cell.length_c_esd ?
_cell.angle_alpha_esd ?
_cell.angle_beta_esd ?
_cell.angle_gamma_esd ?
#
_symmetry.entry_id 3R86
_symmetry.space_group_name_H-M 'P 61'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 169
_symmetry.space_group_name_Hall ?
#
_exptl.entry_id 3R86
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number 1
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 2.38
_exptl_crystal.density_percent_sol 48.33
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.preparation ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.temp 293
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 7.0
_exptl_crystal_grow.pdbx_details
'1mM DNA, 50mM Sodium Cacodylate buffer, 5mM CoCl2,1mM Spermine, 50% MPD, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K'
_exptl_crystal_grow.pdbx_pH_range ?
#
_diffrn.id 1
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector CCD
_diffrn_detector.type 'MARMOSAIC 225 mm CCD'
_diffrn_detector.pdbx_collection_date 2010-07-07
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator 'Si(111) monochromator'
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 1.604
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source SYNCHROTRON
_diffrn_source.type 'ESRF BEAMLINE BM14'
_diffrn_source.pdbx_synchrotron_site ESRF
_diffrn_source.pdbx_synchrotron_beamline BM14
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list 1.604
#
_reflns.entry_id 3R86
_reflns.observed_criterion_sigma_I 1.0
_reflns.observed_criterion_sigma_F 1.0
_reflns.d_resolution_low 28.4
_reflns.d_resolution_high 2.8
_reflns.number_obs 1382
_reflns.number_all 1410
_reflns.percent_possible_obs 98.0
_reflns.pdbx_Rmerge_I_obs 0.051
_reflns.pdbx_Rsym_value 0.047
_reflns.pdbx_netI_over_sigmaI 3.7
_reflns.B_iso_Wilson_estimate 67.3
_reflns.pdbx_redundancy 5.4
_reflns.R_free_details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
#
_reflns_shell.d_res_high 2.803
_reflns_shell.d_res_low 2.873
_reflns_shell.percent_possible_all 99.0
_reflns_shell.Rmerge_I_obs 0.390
_reflns_shell.pdbx_Rsym_value 0.402
_reflns_shell.meanI_over_sigI_obs 1.4
_reflns_shell.pdbx_redundancy 5.5
_reflns_shell.percent_possible_obs ?
_reflns_shell.number_unique_all 77
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_unique_obs ?
_reflns_shell.pdbx_chi_squared ?
_reflns_shell.pdbx_rejects ?
_reflns_shell.pdbx_netI_over_sigmaI_obs ?
_reflns_shell.number_possible ?
_reflns_shell.Rmerge_F_all ?
_reflns_shell.Rmerge_F_obs ?
_reflns_shell.Rmerge_I_all ?
_reflns_shell.meanI_over_sigI_all ?
_reflns_shell.pdbx_Rrim_I_all ?
_reflns_shell.pdbx_Rpim_I_all ?
_reflns_shell.pdbx_diffrn_id ?
_reflns_shell.pdbx_ordinal 1
#
_refine.entry_id 3R86
_refine.ls_number_reflns_obs 1310
_refine.ls_number_reflns_all 1410
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 28.37
_refine.ls_d_res_high 2.80
_refine.ls_percent_reflns_obs 97.94
_refine.ls_R_factor_obs 0.27561
_refine.ls_R_factor_all 0.27561
_refine.ls_R_factor_R_work 0.26004
_refine.ls_R_factor_R_free 0.27001
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free 5.2
_refine.ls_number_reflns_R_free 72
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.correlation_coeff_Fo_to_Fc 0.950
_refine.correlation_coeff_Fo_to_Fc_free 0.934
_refine.B_iso_mean 45.978
_refine.aniso_B[1][1] -7.96
_refine.aniso_B[2][2] -7.96
_refine.aniso_B[3][3] 15.92
_refine.aniso_B[1][2] 0.00
_refine.aniso_B[1][3] 0.00
_refine.aniso_B[2][3] 0.00
_refine.solvent_model_details 'BABINET MODEL WITH MASK'
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_solvent_vdw_probe_radii 1.40
_refine.pdbx_solvent_ion_probe_radii 0.80
_refine.pdbx_solvent_shrinkage_radii 0.80
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.details ?
_refine.pdbx_starting_model 'B-DNA fiber model'
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_isotropic_thermal_model isotropic
_refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD'
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_overall_ESU_R_Free 0.105
_refine.overall_SU_ML 0.384
_refine.overall_SU_B 21.376
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.ls_redundancy_reflns_obs ?
_refine.B_iso_min ?
_refine.B_iso_max ?
_refine.overall_SU_R_free ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_overall_phase_error ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 404
_refine_hist.pdbx_number_atoms_ligand 3
_refine_hist.number_atoms_solvent 11
_refine_hist.number_atoms_total 418
_refine_hist.d_res_high 2.80
_refine_hist.d_res_low 28.37
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_restraint_function
_refine_ls_restr.pdbx_refine_id
r_bond_refined_d 0.029 0.021 ? 452 ? 'X-RAY DIFFRACTION'
r_angle_refined_deg 3.900 3.000 ? 694 ? 'X-RAY DIFFRACTION'
r_chiral_restr 0.183 0.200 ? 78 ? 'X-RAY DIFFRACTION'
r_gen_planes_refined 0.013 0.020 ? 210 ? 'X-RAY DIFFRACTION'
#
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_ls_shell.pdbx_total_number_of_bins_used 20
_refine_ls_shell.d_res_high 2.803
_refine_ls_shell.d_res_low 2.875
_refine_ls_shell.number_reflns_R_work 77
_refine_ls_shell.R_factor_R_work 0.655
_refine_ls_shell.percent_reflns_obs 84.85
_refine_ls_shell.R_factor_R_free 0.892
_refine_ls_shell.R_factor_R_free_error ?
_refine_ls_shell.percent_reflns_R_free ?
_refine_ls_shell.number_reflns_R_free 7
_refine_ls_shell.number_reflns_all ?
_refine_ls_shell.R_factor_all ?
_refine_ls_shell.number_reflns_obs 77
_refine_ls_shell.redundancy_reflns_obs ?
#
_database_PDB_matrix.entry_id 3R86
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 3R86
_struct.title 'Crystal structure of d(CCGGTACCGG)2 as B-DNA duplex grown with 5 mM CoCl2'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 3R86
_struct_keywords.pdbx_keywords DNA
_struct_keywords.text 'Duplex, DNA'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 1 ?
C N N 2 ?
D N N 2 ?
E N N 2 ?
F N N 3 ?
G N N 3 ?
#
_struct_ref.id 1
_struct_ref.db_name PDB
_struct_ref.db_code 3R86
_struct_ref.pdbx_db_accession 3R86
_struct_ref.entity_id 1
_struct_ref.pdbx_align_begin ?
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_db_isoform ?
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.pdbx_PDB_id_code
_struct_ref_seq.pdbx_strand_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.pdbx_seq_align_beg_ins_code
_struct_ref_seq.seq_align_end
_struct_ref_seq.pdbx_seq_align_end_ins_code
_struct_ref_seq.pdbx_db_accession
_struct_ref_seq.db_align_beg
_struct_ref_seq.pdbx_db_align_beg_ins_code
_struct_ref_seq.db_align_end
_struct_ref_seq.pdbx_db_align_end_ins_code
_struct_ref_seq.pdbx_auth_seq_align_beg
_struct_ref_seq.pdbx_auth_seq_align_end
1 1 3R86 A 1 ? 10 ? 3R86 1 ? 10 ? 1 10
2 1 3R86 B 1 ? 10 ? 3R86 1 ? 10 ? 1 10
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_and_software_defined_assembly
_pdbx_struct_assembly.method_details PISA
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
loop_
_pdbx_struct_assembly_prop.biol_id
_pdbx_struct_assembly_prop.type
_pdbx_struct_assembly_prop.value
_pdbx_struct_assembly_prop.details
1 'ABSA (A^2)' 920 ?
1 MORE -3 ?
1 'SSA (A^2)' 3810 ?
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
metalc1 metalc ? ? A DG 3 C8 ? ? ? 1_555 C CO . CO ? ? A DG 3 A CO 11 1_555 ? ? ? ? ? ? ? 2.787 ? ?
metalc2 metalc ? ? C CO . CO ? ? ? 1_555 F HOH . O ? ? A CO 11 A HOH 13 1_555 ? ? ? ? ? ? ? 2.225 ? ?
metalc3 metalc ? ? B DG 3 N7 ? ? ? 1_555 D CO . CO ? ? B DG 3 B CO 11 1_555 ? ? ? ? ? ? ? 2.520 ? ?
metalc4 metalc ? ? B DG 9 N7 ? ? ? 1_555 E CO . CO ? ? B DG 9 B CO 12 1_555 ? ? ? ? ? ? ? 2.560 ? ?
metalc5 metalc ? ? D CO . CO ? ? ? 1_555 G HOH . O ? ? B CO 11 B HOH 14 1_555 ? ? ? ? ? ? ? 2.382 ? ?
metalc6 metalc ? ? E CO . CO ? ? ? 1_555 G HOH . O ? ? B CO 12 B HOH 15 1_555 ? ? ? ? ? ? ? 2.771 ? ?
hydrog1 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 9 O6 ? ? A DC 1 B DG 9 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ?
hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 10 O6 ? ? A DC 1 B DG 10 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ?
hydrog3 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 9 O6 ? ? A DC 2 B DG 9 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ?
hydrog4 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 8 N3 ? ? A DG 3 B DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog5 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 8 O2 ? ? A DG 3 B DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog6 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 8 N4 ? ? A DG 3 B DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog7 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 7 N3 ? ? A DG 4 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog8 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 7 O2 ? ? A DG 4 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog9 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 7 N4 ? ? A DG 4 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog10 hydrog ? ? A DT 5 O4 ? ? ? 1_555 B DA 6 N6 ? ? A DT 5 B DA 6 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ?
hydrog11 hydrog ? ? A DA 6 N1 ? ? ? 1_555 B DT 5 N3 ? ? A DA 6 B DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog12 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 5 O4 ? ? A DA 6 B DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog13 hydrog ? ? A DC 7 N3 ? ? ? 1_555 B DG 4 N1 ? ? A DC 7 B DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog14 hydrog ? ? A DC 7 N4 ? ? ? 1_555 B DG 4 O6 ? ? A DC 7 B DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog15 hydrog ? ? A DC 7 O2 ? ? ? 1_555 B DG 4 N2 ? ? A DC 7 B DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog16 hydrog ? ? A DC 8 N3 ? ? ? 1_555 B DG 3 N1 ? ? A DC 8 B DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog17 hydrog ? ? A DC 8 N4 ? ? ? 1_555 B DG 3 O6 ? ? A DC 8 B DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog18 hydrog ? ? A DC 8 O2 ? ? ? 1_555 B DG 3 N2 ? ? A DC 8 B DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog19 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DC 2 N3 ? ? A DG 9 B DC 2 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ?
hydrog20 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 1 N3 ? ? A DG 10 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog21 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 1 O2 ? ? A DG 10 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog22 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 1 N4 ? ? A DG 10 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
metalc ? ?
hydrog ? ?
#
loop_
_pdbx_struct_conn_angle.id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_alt_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_auth_atom_id
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_alt_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr2_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_atom_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code
_pdbx_struct_conn_angle.ptnr2_symmetry
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_alt_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_atom_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_pdbx_struct_conn_angle.value_esd
1 C8 ? A DG 3 ? A DG 3 ? 1_555 CO ? C CO . ? A CO 11 ? 1_555 O ? F HOH . ? A HOH 13 ? 1_555 78.1 ?
2 N7 ? B DG 3 ? B DG 3 ? 1_555 CO ? D CO . ? B CO 11 ? 1_555 O ? G HOH . ? B HOH 14 ? 1_555 78.4 ?
3 N7 ? B DG 9 ? B DG 9 ? 1_555 CO ? E CO . ? B CO 12 ? 1_555 O ? G HOH . ? B HOH 15 ? 1_555 57.1 ?
#
loop_
_struct_site.id
_struct_site.pdbx_evidence_code
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_struct_site.pdbx_auth_ins_code
_struct_site.pdbx_num_residues
_struct_site.details
AC1 Software A CO 11 ? 2 'BINDING SITE FOR RESIDUE CO A 11'
AC2 Software B CO 11 ? 2 'BINDING SITE FOR RESIDUE CO B 11'
AC3 Software B CO 12 ? 2 'BINDING SITE FOR RESIDUE CO B 12'
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 2 DG A 3 ? DG A 3 . ? 1_555 ?
2 AC1 2 HOH F . ? HOH A 13 . ? 1_555 ?
3 AC2 2 DG B 3 ? DG B 3 . ? 1_555 ?
4 AC2 2 HOH G . ? HOH B 14 . ? 1_555 ?
5 AC3 2 DG B 9 ? DG B 9 . ? 1_555 ?
6 AC3 2 HOH G . ? HOH B 15 . ? 1_555 ?
#
loop_
_pdbx_validate_rmsd_bond.id
_pdbx_validate_rmsd_bond.PDB_model_num
_pdbx_validate_rmsd_bond.auth_atom_id_1
_pdbx_validate_rmsd_bond.auth_asym_id_1
_pdbx_validate_rmsd_bond.auth_comp_id_1
_pdbx_validate_rmsd_bond.auth_seq_id_1
_pdbx_validate_rmsd_bond.PDB_ins_code_1
_pdbx_validate_rmsd_bond.label_alt_id_1
_pdbx_validate_rmsd_bond.auth_atom_id_2
_pdbx_validate_rmsd_bond.auth_asym_id_2
_pdbx_validate_rmsd_bond.auth_comp_id_2
_pdbx_validate_rmsd_bond.auth_seq_id_2
_pdbx_validate_rmsd_bond.PDB_ins_code_2
_pdbx_validate_rmsd_bond.label_alt_id_2
_pdbx_validate_rmsd_bond.bond_value
_pdbx_validate_rmsd_bond.bond_target_value
_pdbx_validate_rmsd_bond.bond_deviation
_pdbx_validate_rmsd_bond.bond_standard_deviation
_pdbx_validate_rmsd_bond.linker_flag
1 1 "C5'" A DC 2 ? ? "C4'" A DC 2 ? ? 1.562 1.512 0.050 0.007 N
2 1 N1 A DC 2 ? ? C2 A DC 2 ? ? 1.494 1.397 0.097 0.010 N
3 1 C2 A DC 2 ? ? N3 A DC 2 ? ? 1.411 1.353 0.058 0.008 N
4 1 N3 A DC 2 ? ? C4 A DC 2 ? ? 1.383 1.335 0.048 0.007 N
5 1 C4 A DC 2 ? ? C5 A DC 2 ? ? 1.482 1.425 0.057 0.008 N
6 1 "O3'" A DG 3 ? ? "C3'" A DG 3 ? ? 1.589 1.435 0.154 0.013 N
7 1 C2 A DG 3 ? ? N3 A DG 3 ? ? 1.378 1.323 0.055 0.008 N
8 1 C5 A DG 3 ? ? N7 A DG 3 ? ? 1.431 1.388 0.043 0.006 N
9 1 N7 A DG 3 ? ? C8 A DG 3 ? ? 1.343 1.305 0.038 0.006 N
10 1 N9 A DG 3 ? ? C4 A DG 3 ? ? 1.428 1.375 0.053 0.008 N
11 1 "C5'" A DG 4 ? ? "C4'" A DG 4 ? ? 1.558 1.512 0.046 0.007 N
12 1 N9 A DG 4 ? ? C4 A DG 4 ? ? 1.429 1.375 0.054 0.008 N
13 1 "C5'" A DT 5 ? ? "C4'" A DT 5 ? ? 1.571 1.512 0.059 0.007 N
14 1 P A DG 10 ? ? "O5'" A DG 10 ? ? 1.660 1.593 0.067 0.010 N
15 1 C6 B DG 3 ? ? N1 B DG 3 ? ? 1.434 1.391 0.043 0.007 N
16 1 "O3'" B DT 5 ? ? "C3'" B DT 5 ? ? 1.362 1.419 -0.057 0.006 N
17 1 "O3'" B DT 5 ? ? P B DA 6 ? ? 1.400 1.607 -0.207 0.012 Y
18 1 P B DA 6 ? ? "O5'" B DA 6 ? ? 1.431 1.593 -0.162 0.010 N
19 1 "C5'" B DC 7 ? ? "C4'" B DC 7 ? ? 1.558 1.512 0.046 0.007 N
20 1 N1 B DC 7 ? ? C2 B DC 7 ? ? 1.473 1.397 0.076 0.010 N
21 1 N3 B DC 7 ? ? C4 B DC 7 ? ? 1.398 1.335 0.063 0.007 N
22 1 C4 B DC 7 ? ? C5 B DC 7 ? ? 1.487 1.425 0.062 0.008 N
23 1 P B DC 8 ? ? "O5'" B DC 8 ? ? 1.655 1.593 0.062 0.010 N
24 1 "C5'" B DC 8 ? ? "C4'" B DC 8 ? ? 1.581 1.512 0.069 0.007 N
25 1 "C1'" B DC 8 ? ? N1 B DC 8 ? ? 1.614 1.488 0.126 0.013 N
26 1 C2 B DC 8 ? ? O2 B DC 8 ? ? 1.309 1.240 0.069 0.009 N
27 1 N1 B DC 8 ? ? C2 B DC 8 ? ? 1.457 1.397 0.060 0.010 N
28 1 N1 B DC 8 ? ? C6 B DC 8 ? ? 1.424 1.367 0.057 0.006 N
29 1 C2 B DC 8 ? ? N3 B DC 8 ? ? 1.423 1.353 0.070 0.008 N
30 1 N3 B DC 8 ? ? C4 B DC 8 ? ? 1.392 1.335 0.057 0.007 N
31 1 "O3'" B DG 9 ? ? "C3'" B DG 9 ? ? 1.548 1.435 0.113 0.013 N
32 1 N9 B DG 10 ? ? C4 B DG 10 ? ? 1.426 1.375 0.051 0.008 N
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 113.86 108.30 5.56 0.30 N
2 1 N3 A DC 1 ? ? C4 A DC 1 ? ? C5 A DC 1 ? ? 119.44 121.90 -2.46 0.40 N
3 1 "O4'" A DC 2 ? ? "C4'" A DC 2 ? ? "C3'" A DC 2 ? ? 99.66 104.50 -4.84 0.40 N
4 1 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? "C2'" A DC 2 ? ? 98.44 105.90 -7.46 0.80 N
5 1 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? N1 A DC 2 ? ? 99.41 108.00 -8.59 0.70 N
6 1 N1 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 127.50 118.90 8.60 0.60 N
7 1 N3 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 113.68 121.90 -8.22 0.70 N
8 1 C6 A DC 2 ? ? N1 A DC 2 ? ? "C1'" A DC 2 ? ? 108.17 120.80 -12.63 1.20 N
9 1 C2 A DC 2 ? ? N1 A DC 2 ? ? "C1'" A DC 2 ? ? 131.93 118.80 13.13 1.10 N
10 1 "C3'" A DC 2 ? ? "O3'" A DC 2 ? ? P A DG 3 ? ? 131.43 119.70 11.73 1.20 Y
11 1 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 113.85 108.30 5.55 0.30 N
12 1 N3 A DG 3 ? ? C4 A DG 3 ? ? C5 A DG 3 ? ? 125.24 128.60 -3.36 0.50 N
13 1 N7 A DG 3 ? ? C8 A DG 3 ? ? N9 A DG 3 ? ? 116.46 113.10 3.36 0.50 N
14 1 C8 A DG 3 ? ? N9 A DG 3 ? ? C4 A DG 3 ? ? 103.17 106.40 -3.23 0.40 N
15 1 N1 A DG 3 ? ? C2 A DG 3 ? ? N2 A DG 3 ? ? 110.36 116.20 -5.84 0.90 N
16 1 N3 A DG 3 ? ? C2 A DG 3 ? ? N2 A DG 3 ? ? 125.23 119.90 5.33 0.70 N
17 1 N1 A DG 3 ? ? C6 A DG 3 ? ? O6 A DG 3 ? ? 112.32 119.90 -7.58 0.60 N
18 1 C5 A DG 3 ? ? C6 A DG 3 ? ? O6 A DG 3 ? ? 133.67 128.60 5.07 0.60 N
19 1 "C3'" A DG 3 ? ? "O3'" A DG 3 ? ? P A DG 4 ? ? 133.21 119.70 13.51 1.20 Y
20 1 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 116.18 108.30 7.88 0.30 N
21 1 N3 A DG 4 ? ? C4 A DG 4 ? ? C5 A DG 4 ? ? 124.44 128.60 -4.16 0.50 N
22 1 N3 A DG 4 ? ? C4 A DG 4 ? ? N9 A DG 4 ? ? 130.94 126.00 4.94 0.60 N
23 1 C6 A DG 4 ? ? C5 A DG 4 ? ? N7 A DG 4 ? ? 126.11 130.40 -4.29 0.60 N
24 1 N1 A DG 4 ? ? C2 A DG 4 ? ? N2 A DG 4 ? ? 107.26 116.20 -8.94 0.90 N
25 1 N3 A DG 4 ? ? C2 A DG 4 ? ? N2 A DG 4 ? ? 125.99 119.90 6.09 0.70 N
26 1 "C3'" A DT 5 ? ? "C2'" A DT 5 ? ? "C1'" A DT 5 ? ? 91.04 102.40 -11.36 0.80 N
27 1 N1 A DT 5 ? ? "C1'" A DT 5 ? ? "C2'" A DT 5 ? ? 125.53 114.30 11.23 1.40 N
28 1 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 110.68 108.30 2.38 0.30 N
29 1 "C3'" A DA 6 ? ? "C2'" A DA 6 ? ? "C1'" A DA 6 ? ? 97.07 102.40 -5.33 0.80 N
30 1 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? N9 A DA 6 ? ? 99.76 108.00 -8.24 0.70 N
31 1 "O4'" A DC 7 ? ? "C4'" A DC 7 ? ? "C3'" A DC 7 ? ? 101.34 104.50 -3.16 0.40 N
32 1 C2 A DC 7 ? ? N3 A DC 7 ? ? C4 A DC 7 ? ? 116.73 119.90 -3.17 0.50 N
33 1 "C3'" A DC 7 ? ? "O3'" A DC 7 ? ? P A DC 8 ? ? 129.34 119.70 9.64 1.20 Y
34 1 "O4'" A DC 8 ? ? "C4'" A DC 8 ? ? "C3'" A DC 8 ? ? 99.46 104.50 -5.04 0.40 N
35 1 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 111.22 108.30 2.92 0.30 N
36 1 C2 A DC 8 ? ? N1 A DC 8 ? ? "C1'" A DC 8 ? ? 125.94 118.80 7.14 1.10 N
37 1 "C5'" A DG 9 ? ? "C4'" A DG 9 ? ? "O4'" A DG 9 ? ? 120.32 109.80 10.52 1.10 N
38 1 "C1'" A DG 9 ? ? "O4'" A DG 9 ? ? "C4'" A DG 9 ? ? 103.73 110.10 -6.37 1.00 N
39 1 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 117.28 108.30 8.98 0.30 N
40 1 C4 A DG 9 ? ? C5 A DG 9 ? ? N7 A DG 9 ? ? 113.43 110.80 2.63 0.40 N
41 1 C8 A DG 9 ? ? N9 A DG 9 ? ? C4 A DG 9 ? ? 109.58 106.40 3.18 0.40 N
42 1 N9 A DG 9 ? ? C4 A DG 9 ? ? C5 A DG 9 ? ? 101.97 105.40 -3.43 0.40 N
43 1 N3 A DG 9 ? ? C2 A DG 9 ? ? N2 A DG 9 ? ? 125.66 119.90 5.76 0.70 N
44 1 "O4'" B DC 1 ? ? "C4'" B DC 1 ? ? "C3'" B DC 1 ? ? 101.74 104.50 -2.76 0.40 N
45 1 "O4'" B DC 1 ? ? "C1'" B DC 1 ? ? N1 B DC 1 ? ? 102.32 108.00 -5.68 0.70 N
46 1 "O4'" B DC 2 ? ? "C1'" B DC 2 ? ? N1 B DC 2 ? ? 111.46 108.30 3.16 0.30 N
47 1 N1 B DC 2 ? ? C2 B DC 2 ? ? O2 B DC 2 ? ? 123.86 118.90 4.96 0.60 N
48 1 C6 B DC 2 ? ? N1 B DC 2 ? ? "C1'" B DC 2 ? ? 109.37 120.80 -11.43 1.20 N
49 1 C2 B DC 2 ? ? N1 B DC 2 ? ? "C1'" B DC 2 ? ? 128.57 118.80 9.77 1.10 N
50 1 "C4'" B DG 3 ? ? "C3'" B DG 3 ? ? "C2'" B DG 3 ? ? 97.83 102.20 -4.37 0.70 N
51 1 "O4'" B DG 3 ? ? "C1'" B DG 3 ? ? N9 B DG 3 ? ? 103.22 108.00 -4.78 0.70 N
52 1 C2 B DG 3 ? ? N3 B DG 3 ? ? C4 B DG 3 ? ? 115.50 111.90 3.60 0.50 N
53 1 C5 B DG 3 ? ? C6 B DG 3 ? ? N1 B DG 3 ? ? 114.56 111.50 3.06 0.50 N
54 1 "C3'" B DG 3 ? ? "O3'" B DG 3 ? ? P B DG 4 ? ? 128.14 119.70 8.44 1.20 Y
55 1 C5 B DG 4 ? ? C6 B DG 4 ? ? O6 B DG 4 ? ? 124.72 128.60 -3.88 0.60 N
56 1 "O4'" B DT 5 ? ? "C4'" B DT 5 ? ? "C3'" B DT 5 ? ? 95.77 104.50 -8.73 0.40 N
57 1 "C1'" B DT 5 ? ? "O4'" B DT 5 ? ? "C4'" B DT 5 ? ? 103.91 110.10 -6.19 1.00 N
58 1 "C4'" B DT 5 ? ? "C3'" B DT 5 ? ? "O3'" B DT 5 ? ? 132.47 112.30 20.17 2.00 N
59 1 "C4'" B DT 5 ? ? "C3'" B DT 5 ? ? "C2'" B DT 5 ? ? 109.11 103.10 6.01 0.90 N
60 1 "C3'" B DT 5 ? ? "C2'" B DT 5 ? ? "C1'" B DT 5 ? ? 96.40 102.40 -6.00 0.80 N
61 1 C5 B DT 5 ? ? C4 B DT 5 ? ? O4 B DT 5 ? ? 120.05 124.90 -4.85 0.70 N
62 1 "O5'" B DA 6 ? ? P B DA 6 ? ? OP1 B DA 6 ? ? 119.43 110.70 8.73 1.20 N
63 1 P B DA 6 ? ? "O5'" B DA 6 ? ? "C5'" B DA 6 ? ? 130.89 120.90 9.99 1.60 N
64 1 "O4'" B DA 6 ? ? "C4'" B DA 6 ? ? "C3'" B DA 6 ? ? 101.27 104.50 -3.23 0.40 N
65 1 C2 B DC 7 ? ? N3 B DC 7 ? ? C4 B DC 7 ? ? 115.39 119.90 -4.51 0.50 N
66 1 N3 B DC 7 ? ? C4 B DC 7 ? ? C5 B DC 7 ? ? 125.07 121.90 3.17 0.40 N
67 1 C6 B DC 7 ? ? N1 B DC 7 ? ? "C1'" B DC 7 ? ? 109.92 120.80 -10.88 1.20 N
68 1 C2 B DC 7 ? ? N1 B DC 7 ? ? "C1'" B DC 7 ? ? 129.20 118.80 10.40 1.10 N
69 1 "C3'" B DC 7 ? ? "O3'" B DC 7 ? ? P B DC 8 ? ? 127.28 119.70 7.58 1.20 Y
70 1 P B DC 8 ? ? "O5'" B DC 8 ? ? "C5'" B DC 8 ? ? 131.59 120.90 10.69 1.60 N
71 1 "C3'" B DC 8 ? ? "C2'" B DC 8 ? ? "C1'" B DC 8 ? ? 96.64 102.40 -5.76 0.80 N
72 1 "O4'" B DC 8 ? ? "C1'" B DC 8 ? ? N1 B DC 8 ? ? 115.68 108.30 7.38 0.30 N
73 1 N1 B DC 8 ? ? C2 B DC 8 ? ? O2 B DC 8 ? ? 125.04 118.90 6.14 0.60 N
74 1 N3 B DC 8 ? ? C2 B DC 8 ? ? O2 B DC 8 ? ? 117.03 121.90 -4.87 0.70 N
75 1 "C1'" B DG 9 ? ? "O4'" B DG 9 ? ? "C4'" B DG 9 ? ? 104.04 110.10 -6.06 1.00 N
76 1 N9 B DG 9 ? ? "C1'" B DG 9 ? ? "C2'" B DG 9 ? ? 125.25 114.30 10.95 1.40 N
77 1 "O4'" B DG 9 ? ? "C1'" B DG 9 ? ? N9 B DG 9 ? ? 115.47 108.30 7.17 0.30 N
78 1 C8 B DG 9 ? ? N9 B DG 9 ? ? C4 B DG 9 ? ? 103.79 106.40 -2.61 0.40 N
79 1 N3 B DG 9 ? ? C2 B DG 9 ? ? N2 B DG 9 ? ? 115.24 119.90 -4.66 0.70 N
80 1 C5 B DG 9 ? ? C6 B DG 9 ? ? O6 B DG 9 ? ? 124.98 128.60 -3.62 0.60 N
81 1 "C3'" B DG 9 ? ? "O3'" B DG 9 ? ? P B DG 10 ? ? 131.44 119.70 11.74 1.20 Y
82 1 "O4'" B DG 10 ? ? "C4'" B DG 10 ? ? "C3'" B DG 10 ? ? 100.11 104.50 -4.39 0.40 N
83 1 "C5'" B DG 10 ? ? "C4'" B DG 10 ? ? "O4'" B DG 10 ? ? 118.71 109.80 8.91 1.10 N
84 1 C2 B DG 10 ? ? N3 B DG 10 ? ? C4 B DG 10 ? ? 115.74 111.90 3.84 0.50 N
85 1 N3 B DG 10 ? ? C4 B DG 10 ? ? C5 B DG 10 ? ? 123.87 128.60 -4.73 0.50 N
86 1 C8 B DG 10 ? ? N9 B DG 10 ? ? C4 B DG 10 ? ? 103.65 106.40 -2.75 0.40 N
87 1 N3 B DG 10 ? ? C4 B DG 10 ? ? N9 B DG 10 ? ? 129.96 126.00 3.96 0.60 N
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
CO CO CO N N 1
DA OP3 O N N 2
DA P P N N 3
DA OP1 O N N 4
DA OP2 O N N 5
DA "O5'" O N N 6
DA "C5'" C N N 7
DA "C4'" C N R 8
DA "O4'" O N N 9
DA "C3'" C N S 10
DA "O3'" O N N 11
DA "C2'" C N N 12
DA "C1'" C N R 13
DA N9 N Y N 14
DA C8 C Y N 15
DA N7 N Y N 16
DA C5 C Y N 17
DA C6 C Y N 18
DA N6 N N N 19
DA N1 N Y N 20
DA C2 C Y N 21
DA N3 N Y N 22
DA C4 C Y N 23
DA HOP3 H N N 24
DA HOP2 H N N 25
DA "H5'" H N N 26
DA "H5''" H N N 27
DA "H4'" H N N 28
DA "H3'" H N N 29
DA "HO3'" H N N 30
DA "H2'" H N N 31
DA "H2''" H N N 32
DA "H1'" H N N 33
DA H8 H N N 34
DA H61 H N N 35
DA H62 H N N 36
DA H2 H N N 37
DC OP3 O N N 38
DC P P N N 39
DC OP1 O N N 40
DC OP2 O N N 41
DC "O5'" O N N 42
DC "C5'" C N N 43
DC "C4'" C N R 44
DC "O4'" O N N 45
DC "C3'" C N S 46
DC "O3'" O N N 47
DC "C2'" C N N 48
DC "C1'" C N R 49
DC N1 N N N 50
DC C2 C N N 51
DC O2 O N N 52
DC N3 N N N 53
DC C4 C N N 54
DC N4 N N N 55
DC C5 C N N 56
DC C6 C N N 57
DC HOP3 H N N 58
DC HOP2 H N N 59
DC "H5'" H N N 60
DC "H5''" H N N 61
DC "H4'" H N N 62
DC "H3'" H N N 63
DC "HO3'" H N N 64
DC "H2'" H N N 65
DC "H2''" H N N 66
DC "H1'" H N N 67
DC H41 H N N 68
DC H42 H N N 69
DC H5 H N N 70
DC H6 H N N 71
DG OP3 O N N 72
DG P P N N 73
DG OP1 O N N 74
DG OP2 O N N 75
DG "O5'" O N N 76
DG "C5'" C N N 77
DG "C4'" C N R 78
DG "O4'" O N N 79
DG "C3'" C N S 80
DG "O3'" O N N 81
DG "C2'" C N N 82
DG "C1'" C N R 83
DG N9 N Y N 84
DG C8 C Y N 85
DG N7 N Y N 86
DG C5 C Y N 87
DG C6 C N N 88
DG O6 O N N 89
DG N1 N N N 90
DG C2 C N N 91
DG N2 N N N 92
DG N3 N N N 93
DG C4 C Y N 94
DG HOP3 H N N 95
DG HOP2 H N N 96
DG "H5'" H N N 97
DG "H5''" H N N 98
DG "H4'" H N N 99
DG "H3'" H N N 100
DG "HO3'" H N N 101
DG "H2'" H N N 102
DG "H2''" H N N 103
DG "H1'" H N N 104
DG H8 H N N 105
DG H1 H N N 106
DG H21 H N N 107
DG H22 H N N 108
DT OP3 O N N 109
DT P P N N 110
DT OP1 O N N 111
DT OP2 O N N 112
DT "O5'" O N N 113
DT "C5'" C N N 114
DT "C4'" C N R 115
DT "O4'" O N N 116
DT "C3'" C N S 117
DT "O3'" O N N 118
DT "C2'" C N N 119
DT "C1'" C N R 120
DT N1 N N N 121
DT C2 C N N 122
DT O2 O N N 123
DT N3 N N N 124
DT C4 C N N 125
DT O4 O N N 126
DT C5 C N N 127
DT C7 C N N 128
DT C6 C N N 129
DT HOP3 H N N 130
DT HOP2 H N N 131
DT "H5'" H N N 132
DT "H5''" H N N 133
DT "H4'" H N N 134
DT "H3'" H N N 135
DT "HO3'" H N N 136
DT "H2'" H N N 137
DT "H2''" H N N 138
DT "H1'" H N N 139
DT H3 H N N 140
DT H71 H N N 141
DT H72 H N N 142
DT H73 H N N 143
DT H6 H N N 144
HOH O O N N 145
HOH H1 H N N 146
HOH H2 H N N 147
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DA OP3 P sing N N 1
DA OP3 HOP3 sing N N 2
DA P OP1 doub N N 3
DA P OP2 sing N N 4
DA P "O5'" sing N N 5
DA OP2 HOP2 sing N N 6
DA "O5'" "C5'" sing N N 7
DA "C5'" "C4'" sing N N 8
DA "C5'" "H5'" sing N N 9
DA "C5'" "H5''" sing N N 10
DA "C4'" "O4'" sing N N 11
DA "C4'" "C3'" sing N N 12
DA "C4'" "H4'" sing N N 13
DA "O4'" "C1'" sing N N 14
DA "C3'" "O3'" sing N N 15
DA "C3'" "C2'" sing N N 16
DA "C3'" "H3'" sing N N 17
DA "O3'" "HO3'" sing N N 18
DA "C2'" "C1'" sing N N 19
DA "C2'" "H2'" sing N N 20
DA "C2'" "H2''" sing N N 21
DA "C1'" N9 sing N N 22
DA "C1'" "H1'" sing N N 23
DA N9 C8 sing Y N 24
DA N9 C4 sing Y N 25
DA C8 N7 doub Y N 26
DA C8 H8 sing N N 27
DA N7 C5 sing Y N 28
DA C5 C6 sing Y N 29
DA C5 C4 doub Y N 30
DA C6 N6 sing N N 31
DA C6 N1 doub Y N 32
DA N6 H61 sing N N 33
DA N6 H62 sing N N 34
DA N1 C2 sing Y N 35
DA C2 N3 doub Y N 36
DA C2 H2 sing N N 37
DA N3 C4 sing Y N 38
DC OP3 P sing N N 39
DC OP3 HOP3 sing N N 40
DC P OP1 doub N N 41
DC P OP2 sing N N 42
DC P "O5'" sing N N 43
DC OP2 HOP2 sing N N 44
DC "O5'" "C5'" sing N N 45
DC "C5'" "C4'" sing N N 46
DC "C5'" "H5'" sing N N 47
DC "C5'" "H5''" sing N N 48
DC "C4'" "O4'" sing N N 49
DC "C4'" "C3'" sing N N 50
DC "C4'" "H4'" sing N N 51
DC "O4'" "C1'" sing N N 52
DC "C3'" "O3'" sing N N 53
DC "C3'" "C2'" sing N N 54
DC "C3'" "H3'" sing N N 55
DC "O3'" "HO3'" sing N N 56
DC "C2'" "C1'" sing N N 57
DC "C2'" "H2'" sing N N 58
DC "C2'" "H2''" sing N N 59
DC "C1'" N1 sing N N 60
DC "C1'" "H1'" sing N N 61
DC N1 C2 sing N N 62
DC N1 C6 sing N N 63
DC C2 O2 doub N N 64
DC C2 N3 sing N N 65
DC N3 C4 doub N N 66
DC C4 N4 sing N N 67
DC C4 C5 sing N N 68
DC N4 H41 sing N N 69
DC N4 H42 sing N N 70
DC C5 C6 doub N N 71
DC C5 H5 sing N N 72
DC C6 H6 sing N N 73
DG OP3 P sing N N 74
DG OP3 HOP3 sing N N 75
DG P OP1 doub N N 76
DG P OP2 sing N N 77
DG P "O5'" sing N N 78
DG OP2 HOP2 sing N N 79
DG "O5'" "C5'" sing N N 80
DG "C5'" "C4'" sing N N 81
DG "C5'" "H5'" sing N N 82
DG "C5'" "H5''" sing N N 83
DG "C4'" "O4'" sing N N 84
DG "C4'" "C3'" sing N N 85
DG "C4'" "H4'" sing N N 86
DG "O4'" "C1'" sing N N 87
DG "C3'" "O3'" sing N N 88
DG "C3'" "C2'" sing N N 89
DG "C3'" "H3'" sing N N 90
DG "O3'" "HO3'" sing N N 91
DG "C2'" "C1'" sing N N 92
DG "C2'" "H2'" sing N N 93
DG "C2'" "H2''" sing N N 94
DG "C1'" N9 sing N N 95
DG "C1'" "H1'" sing N N 96
DG N9 C8 sing Y N 97
DG N9 C4 sing Y N 98
DG C8 N7 doub Y N 99
DG C8 H8 sing N N 100
DG N7 C5 sing Y N 101
DG C5 C6 sing N N 102
DG C5 C4 doub Y N 103
DG C6 O6 doub N N 104
DG C6 N1 sing N N 105
DG N1 C2 sing N N 106
DG N1 H1 sing N N 107
DG C2 N2 sing N N 108
DG C2 N3 doub N N 109
DG N2 H21 sing N N 110
DG N2 H22 sing N N 111
DG N3 C4 sing N N 112
DT OP3 P sing N N 113
DT OP3 HOP3 sing N N 114
DT P OP1 doub N N 115
DT P OP2 sing N N 116
DT P "O5'" sing N N 117
DT OP2 HOP2 sing N N 118
DT "O5'" "C5'" sing N N 119
DT "C5'" "C4'" sing N N 120
DT "C5'" "H5'" sing N N 121
DT "C5'" "H5''" sing N N 122
DT "C4'" "O4'" sing N N 123
DT "C4'" "C3'" sing N N 124
DT "C4'" "H4'" sing N N 125
DT "O4'" "C1'" sing N N 126
DT "C3'" "O3'" sing N N 127
DT "C3'" "C2'" sing N N 128
DT "C3'" "H3'" sing N N 129
DT "O3'" "HO3'" sing N N 130
DT "C2'" "C1'" sing N N 131
DT "C2'" "H2'" sing N N 132
DT "C2'" "H2''" sing N N 133
DT "C1'" N1 sing N N 134
DT "C1'" "H1'" sing N N 135
DT N1 C2 sing N N 136
DT N1 C6 sing N N 137
DT C2 O2 doub N N 138
DT C2 N3 sing N N 139
DT N3 C4 sing N N 140
DT N3 H3 sing N N 141
DT C4 O4 doub N N 142
DT C4 C5 sing N N 143
DT C5 C7 sing N N 144
DT C5 C6 doub N N 145
DT C7 H71 sing N N 146
DT C7 H72 sing N N 147
DT C7 H73 sing N N 148
DT C6 H6 sing N N 149
HOH O H1 sing N N 150
HOH O H2 sing N N 151
#
loop_
_ndb_struct_conf_na.entry_id
_ndb_struct_conf_na.feature
3R86 'double helix'
3R86 'b-form double helix'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A DC 1 1_555 B DG 10 1_555 -1.152 0.143 0.500 -7.190 -0.164 -14.323 1 A_DC1:DG10_B A 1 ? B 10 ? ? 1
1 A DC 2 1_555 B DG 9 1_555 -0.593 0.339 1.216 -7.803 -7.148 -10.441 2 A_DC2:DG9_B A 2 ? B 9 ? ? 1
1 A DG 3 1_555 B DC 8 1_555 0.257 0.208 0.881 15.149 -12.235 -11.147 3 A_DG3:DC8_B A 3 ? B 8 ? 19 1
1 A DG 4 1_555 B DC 7 1_555 0.386 0.013 0.753 16.694 9.562 -9.993 4 A_DG4:DC7_B A 4 ? B 7 ? 19 1
1 A DT 5 1_555 B DA 6 1_555 0.005 0.716 0.102 16.987 -10.925 -18.625 5 A_DT5:DA6_B A 5 ? B 6 ? ? ?
1 A DA 6 1_555 B DT 5 1_555 0.647 -0.541 0.889 16.951 -10.778 -7.250 6 A_DA6:DT5_B A 6 ? B 5 ? 20 1
1 A DC 7 1_555 B DG 4 1_555 -0.392 -0.551 0.123 -2.139 5.865 -2.600 7 A_DC7:DG4_B A 7 ? B 4 ? 19 1
1 A DC 8 1_555 B DG 3 1_555 -0.354 -0.394 0.698 -6.748 0.900 -13.817 8 A_DC8:DG3_B A 8 ? B 3 ? 19 1
1 A DG 9 1_555 B DC 2 1_555 0.232 0.176 0.407 1.937 -2.365 -22.959 9 A_DG9:DC2_B A 9 ? B 2 ? ? 1
1 A DG 10 1_555 B DC 1 1_555 0.376 -0.500 0.288 -6.882 -7.311 -7.818 10 A_DG10:DC1_B A 10 ? B 1 ? 19 1
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A DC 1 1_555 B DG 10 1_555 A DC 2 1_555 B DG 9 1_555 1.944 -0.910 3.090 -4.525 11.430 52.569 -1.640 -2.397 2.689 12.709
5.031 53.888 1 AA_DC1DC2:DG9DG10_BB A 1 ? B 10 ? A 2 ? B 9 ?
1 A DC 2 1_555 B DG 9 1_555 A DG 3 1_555 B DC 8 1_555 -0.972 0.760 2.567 -1.741 5.355 26.661 0.519 1.707 2.721 11.450
3.724 27.239 2 AA_DC2DG3:DC8DG9_BB A 2 ? B 9 ? A 3 ? B 8 ?
1 A DG 3 1_555 B DC 8 1_555 A DG 4 1_555 B DC 7 1_555 -0.202 0.254 3.428 -7.867 -13.327 35.288 2.122 -0.718 3.112 -20.793
12.274 38.433 3 AA_DG3DG4:DC7DC8_BB A 3 ? B 8 ? A 4 ? B 7 ?
1 A DG 4 1_555 B DC 7 1_555 A DT 5 1_555 B DA 6 1_555 0.298 -0.343 3.451 1.379 -8.024 27.013 1.307 -0.267 3.419 -16.702
-2.870 28.191 4 AA_DG4DT5:DA6DC7_BB A 4 ? B 7 ? A 5 ? B 6 ?
1 A DT 5 1_555 B DA 6 1_555 A DA 6 1_555 B DT 5 1_555 0.156 -1.182 3.226 -1.024 5.131 42.114 -2.136 -0.317 3.064 7.108
1.418 42.423 5 AA_DT5DA6:DT5DA6_BB A 5 ? B 6 ? A 6 ? B 5 ?
1 A DA 6 1_555 B DT 5 1_555 A DC 7 1_555 B DG 4 1_555 0.393 -1.602 3.664 4.728 -3.592 30.923 -2.176 0.297 3.837 -6.659
-8.767 31.474 6 AA_DA6DC7:DG4DT5_BB A 6 ? B 5 ? A 7 ? B 4 ?
1 A DC 7 1_555 B DG 4 1_555 A DC 8 1_555 B DG 3 1_555 -0.395 0.241 3.383 -0.262 0.577 35.356 0.309 0.610 3.390 0.950
0.431 35.362 7 AA_DC7DC8:DG3DG4_BB A 7 ? B 4 ? A 8 ? B 3 ?
1 A DC 8 1_555 B DG 3 1_555 A DG 9 1_555 B DC 2 1_555 -0.308 0.240 3.272 5.475 -1.484 27.345 0.847 1.929 3.134 -3.097
-11.426 27.916 8 AA_DC8DG9:DC2DG3_BB A 8 ? B 3 ? A 9 ? B 2 ?
1 A DG 9 1_555 B DC 2 1_555 A DG 10 1_555 B DC 1 1_555 0.812 -0.034 3.393 -2.233 4.208 44.095 -0.447 -1.289 3.333 5.585
2.963 44.338 9 AA_DG9DG10:DC1DC2_BB A 9 ? B 2 ? A 10 ? B 1 ?
#
_pdbx_initial_refinement_model.accession_code ?
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type other
_pdbx_initial_refinement_model.source_name ?
_pdbx_initial_refinement_model.details 'B-DNA fiber model'
#
loop_
_pdbx_reflns_twin.domain_id
_pdbx_reflns_twin.crystal_id
_pdbx_reflns_twin.diffrn_id
_pdbx_reflns_twin.type
_pdbx_reflns_twin.operator
_pdbx_reflns_twin.fraction
1 1 1 ? 'H, K, L' 0.485
2 1 1 ? h+k,-k,-l 0.515
#
_atom_sites.entry_id 3R86
_atom_sites.fract_transf_matrix[1][1] 0.030529
_atom_sites.fract_transf_matrix[1][2] 0.017626
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.035252
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.010678
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
CO
N
O
P
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 O "O5'" . DC A 1 1 ? 14.147 -0.013 8.320 1.00 54.41 ? 1 DC A "O5'" 1
ATOM 2 C "C5'" . DC A 1 1 ? 13.442 -0.064 7.084 1.00 47.83 ? 1 DC A "C5'" 1
ATOM 3 C "C4'" . DC A 1 1 ? 14.368 0.197 5.898 1.00 46.31 ? 1 DC A "C4'" 1
ATOM 4 O "O4'" . DC A 1 1 ? 14.757 -1.086 5.327 1.00 51.06 ? 1 DC A "O4'" 1
ATOM 5 C "C3'" . DC A 1 1 ? 13.635 0.930 4.762 1.00 48.03 ? 1 DC A "C3'" 1
ATOM 6 O "O3'" . DC A 1 1 ? 13.764 2.378 4.822 1.00 58.14 ? 1 DC A "O3'" 1
ATOM 7 C "C2'" . DC A 1 1 ? 14.228 0.321 3.467 1.00 38.52 ? 1 DC A "C2'" 1
ATOM 8 C "C1'" . DC A 1 1 ? 14.999 -0.921 3.920 1.00 49.97 ? 1 DC A "C1'" 1
ATOM 9 N N1 . DC A 1 1 ? 14.833 -2.230 3.095 1.00 29.93 ? 1 DC A N1 1
ATOM 10 C C2 . DC A 1 1 ? 14.859 -2.278 1.670 1.00 46.70 ? 1 DC A C2 1
ATOM 11 O O2 . DC A 1 1 ? 14.975 -1.197 1.042 1.00 51.67 ? 1 DC A O2 1
ATOM 12 N N3 . DC A 1 1 ? 14.735 -3.514 1.026 1.00 27.07 ? 1 DC A N3 1
ATOM 13 C C4 . DC A 1 1 ? 14.627 -4.673 1.749 1.00 34.56 ? 1 DC A C4 1
ATOM 14 N N4 . DC A 1 1 ? 14.515 -5.891 1.153 1.00 25.76 ? 1 DC A N4 1
ATOM 15 C C5 . DC A 1 1 ? 14.611 -4.611 3.183 1.00 31.55 ? 1 DC A C5 1
ATOM 16 C C6 . DC A 1 1 ? 14.710 -3.408 3.791 1.00 35.79 ? 1 DC A C6 1
ATOM 17 P P . DC A 1 2 ? 12.656 3.361 4.149 1.00 71.53 ? 2 DC A P 1
ATOM 18 O OP1 . DC A 1 2 ? 12.863 4.719 4.739 1.00 79.05 ? 2 DC A OP1 1
ATOM 19 O OP2 . DC A 1 2 ? 11.312 2.714 4.238 1.00 50.71 ? 2 DC A OP2 1
ATOM 20 O "O5'" . DC A 1 2 ? 13.093 3.336 2.593 1.00 47.57 ? 2 DC A "O5'" 1
ATOM 21 C "C5'" . DC A 1 2 ? 13.567 2.128 1.905 1.00 31.69 ? 2 DC A "C5'" 1
ATOM 22 C "C4'" . DC A 1 2 ? 12.591 1.497 0.861 1.00 61.42 ? 2 DC A "C4'" 1
ATOM 23 O "O4'" . DC A 1 2 ? 12.499 0.068 0.987 1.00 44.86 ? 2 DC A "O4'" 1
ATOM 24 C "C3'" . DC A 1 2 ? 11.101 1.848 0.822 1.00 55.76 ? 2 DC A "C3'" 1
ATOM 25 O "O3'" . DC A 1 2 ? 10.951 3.171 0.166 1.00 64.60 ? 2 DC A "O3'" 1
ATOM 26 C "C2'" . DC A 1 2 ? 10.483 0.605 0.137 1.00 52.33 ? 2 DC A "C2'" 1
ATOM 27 C "C1'" . DC A 1 2 ? 11.664 -0.369 -0.084 1.00 34.08 ? 2 DC A "C1'" 1
ATOM 28 N N1 . DC A 1 2 ? 11.515 -1.858 0.303 1.00 37.46 ? 2 DC A N1 1
ATOM 29 C C2 . DC A 1 2 ? 11.386 -3.096 -0.523 1.00 60.95 ? 2 DC A C2 1
ATOM 30 O O2 . DC A 1 2 ? 11.276 -3.175 -1.786 1.00 70.83 ? 2 DC A O2 1
ATOM 31 N N3 . DC A 1 2 ? 11.344 -4.347 0.129 1.00 65.33 ? 2 DC A N3 1
ATOM 32 C C4 . DC A 1 2 ? 11.449 -4.404 1.507 1.00 79.67 ? 2 DC A C4 1
ATOM 33 N N4 . DC A 1 2 ? 11.413 -5.629 2.117 1.00 66.49 ? 2 DC A N4 1
ATOM 34 C C5 . DC A 1 2 ? 11.617 -3.177 2.321 1.00 66.53 ? 2 DC A C5 1
ATOM 35 C C6 . DC A 1 2 ? 11.648 -1.963 1.688 1.00 53.03 ? 2 DC A C6 1
ATOM 36 P P . DG A 1 3 ? 10.058 3.644 -1.094 1.00 72.34 ? 3 DG A P 1
ATOM 37 O OP1 . DG A 1 3 ? 10.840 4.730 -1.775 1.00 52.17 ? 3 DG A OP1 1
ATOM 38 O OP2 . DG A 1 3 ? 8.711 4.021 -0.576 1.00 64.92 ? 3 DG A OP2 1
ATOM 39 O "O5'" . DG A 1 3 ? 9.974 2.281 -1.975 1.00 58.18 ? 3 DG A "O5'" 1
ATOM 40 C "C5'" . DG A 1 3 ? 9.961 2.246 -3.432 1.00 51.45 ? 3 DG A "C5'" 1
ATOM 41 C "C4'" . DG A 1 3 ? 8.760 1.494 -4.055 1.00 51.32 ? 3 DG A "C4'" 1
ATOM 42 O "O4'" . DG A 1 3 ? 8.742 0.051 -3.707 1.00 47.20 ? 3 DG A "O4'" 1
ATOM 43 C "C3'" . DG A 1 3 ? 7.371 2.062 -3.682 1.00 54.65 ? 3 DG A "C3'" 1
ATOM 44 O "O3'" . DG A 1 3 ? 6.420 2.555 -4.855 1.00 56.20 ? 3 DG A "O3'" 1
ATOM 45 C "C2'" . DG A 1 3 ? 6.845 1.021 -2.645 1.00 39.84 ? 3 DG A "C2'" 1
ATOM 46 C "C1'" . DG A 1 3 ? 7.587 -0.309 -2.950 1.00 39.35 ? 3 DG A "C1'" 1
ATOM 47 N N9 . DG A 1 3 ? 7.877 -1.237 -1.802 1.00 43.87 ? 3 DG A N9 1
ATOM 48 C C8 . DG A 1 3 ? 7.979 -0.889 -0.447 1.00 44.10 ? 3 DG A C8 1
ATOM 49 N N7 . DG A 1 3 ? 8.237 -1.890 0.410 1.00 20.19 ? 3 DG A N7 1
ATOM 50 C C5 . DG A 1 3 ? 8.302 -3.034 -0.447 1.00 16.83 ? 3 DG A C5 1
ATOM 51 C C6 . DG A 1 3 ? 8.540 -4.437 -0.140 1.00 21.35 ? 3 DG A C6 1
ATOM 52 O O6 . DG A 1 3 ? 8.762 -5.072 0.933 1.00 17.79 ? 3 DG A O6 1
ATOM 53 N N1 . DG A 1 3 ? 8.514 -5.274 -1.255 1.00 9.56 ? 3 DG A N1 1
ATOM 54 C C2 . DG A 1 3 ? 8.292 -4.828 -2.537 1.00 35.84 ? 3 DG A C2 1
ATOM 55 N N2 . DG A 1 3 ? 8.336 -5.866 -3.413 1.00 27.51 ? 3 DG A N2 1
ATOM 56 N N3 . DG A 1 3 ? 8.064 -3.512 -2.875 1.00 25.92 ? 3 DG A N3 1
ATOM 57 C C4 . DG A 1 3 ? 8.079 -2.651 -1.791 1.00 25.25 ? 3 DG A C4 1
ATOM 58 P P . DG A 1 4 ? 6.546 2.522 -6.513 1.00 69.35 ? 4 DG A P 1
ATOM 59 O OP1 . DG A 1 4 ? 7.967 2.184 -6.836 1.00 48.74 ? 4 DG A OP1 1
ATOM 60 O OP2 . DG A 1 4 ? 5.928 3.810 -6.954 1.00 40.34 ? 4 DG A OP2 1
ATOM 61 O "O5'" . DG A 1 4 ? 5.659 1.297 -7.146 1.00 46.73 ? 4 DG A "O5'" 1
ATOM 62 C "C5'" . DG A 1 4 ? 6.335 0.085 -7.540 1.00 25.48 ? 4 DG A "C5'" 1
ATOM 63 C "C4'" . DG A 1 4 ? 5.486 -1.205 -7.749 1.00 33.64 ? 4 DG A "C4'" 1
ATOM 64 O "O4'" . DG A 1 4 ? 5.815 -2.109 -6.639 1.00 44.46 ? 4 DG A "O4'" 1
ATOM 65 C "C3'" . DG A 1 4 ? 3.955 -1.164 -7.733 1.00 39.25 ? 4 DG A "C3'" 1
ATOM 66 O "O3'" . DG A 1 4 ? 3.302 -2.343 -8.344 1.00 40.75 ? 4 DG A "O3'" 1
ATOM 67 C "C2'" . DG A 1 4 ? 3.719 -1.219 -6.238 1.00 27.00 ? 4 DG A "C2'" 1
ATOM 68 C "C1'" . DG A 1 4 ? 4.632 -2.411 -5.893 1.00 47.94 ? 4 DG A "C1'" 1
ATOM 69 N N9 . DG A 1 4 ? 4.814 -2.623 -4.429 1.00 59.59 ? 4 DG A N9 1
ATOM 70 C C8 . DG A 1 4 ? 4.874 -1.568 -3.535 1.00 62.81 ? 4 DG A C8 1
ATOM 71 N N7 . DG A 1 4 ? 5.023 -1.910 -2.275 1.00 39.26 ? 4 DG A N7 1
ATOM 72 C C5 . DG A 1 4 ? 5.047 -3.301 -2.319 1.00 14.95 ? 4 DG A C5 1
ATOM 73 C C6 . DG A 1 4 ? 5.195 -4.173 -1.204 1.00 39.05 ? 4 DG A C6 1
ATOM 74 O O6 . DG A 1 4 ? 5.335 -3.873 0.004 1.00 45.17 ? 4 DG A O6 1
ATOM 75 N N1 . DG A 1 4 ? 5.170 -5.515 -1.556 1.00 37.12 ? 4 DG A N1 1
ATOM 76 C C2 . DG A 1 4 ? 5.042 -5.923 -2.849 1.00 37.03 ? 4 DG A C2 1
ATOM 77 N N2 . DG A 1 4 ? 5.072 -7.258 -2.848 1.00 29.87 ? 4 DG A N2 1
ATOM 78 N N3 . DG A 1 4 ? 4.916 -5.130 -3.941 1.00 32.92 ? 4 DG A N3 1
ATOM 79 C C4 . DG A 1 4 ? 4.915 -3.790 -3.610 1.00 34.16 ? 4 DG A C4 1
ATOM 80 P P . DT A 1 5 ? 3.145 -2.498 -9.990 1.00 76.77 ? 5 DT A P 1
ATOM 81 O OP1 . DT A 1 5 ? 4.409 -2.107 -10.663 1.00 68.76 ? 5 DT A OP1 1
ATOM 82 O OP2 . DT A 1 5 ? 1.909 -1.839 -10.518 1.00 32.92 ? 5 DT A OP2 1
ATOM 83 O "O5'" . DT A 1 5 ? 3.078 -4.096 -10.114 1.00 61.78 ? 5 DT A "O5'" 1
ATOM 84 C "C5'" . DT A 1 5 ? 4.147 -4.847 -9.490 1.00 43.69 ? 5 DT A "C5'" 1
ATOM 85 C "C4'" . DT A 1 5 ? 3.511 -5.897 -8.510 1.00 41.52 ? 5 DT A "C4'" 1
ATOM 86 O "O4'" . DT A 1 5 ? 3.468 -5.291 -7.198 1.00 59.01 ? 5 DT A "O4'" 1
ATOM 87 C "C3'" . DT A 1 5 ? 2.057 -6.263 -8.765 1.00 40.35 ? 5 DT A "C3'" 1
ATOM 88 O "O3'" . DT A 1 5 ? 1.661 -7.485 -8.067 1.00 41.32 ? 5 DT A "O3'" 1
ATOM 89 C "C2'" . DT A 1 5 ? 1.367 -5.069 -8.104 1.00 47.38 ? 5 DT A "C2'" 1
ATOM 90 C "C1'" . DT A 1 5 ? 2.111 -5.327 -6.797 1.00 64.85 ? 5 DT A "C1'" 1
ATOM 91 N N1 . DT A 1 5 ? 1.915 -4.563 -5.511 1.00 57.20 ? 5 DT A N1 1
ATOM 92 C C2 . DT A 1 5 ? 2.104 -5.373 -4.399 1.00 73.24 ? 5 DT A C2 1
ATOM 93 O O2 . DT A 1 5 ? 2.387 -6.571 -4.526 1.00 81.30 ? 5 DT A O2 1
ATOM 94 N N3 . DT A 1 5 ? 1.951 -4.783 -3.152 1.00 55.39 ? 5 DT A N3 1
ATOM 95 C C4 . DT A 1 5 ? 1.621 -3.445 -2.964 1.00 59.09 ? 5 DT A C4 1
ATOM 96 O O4 . DT A 1 5 ? 1.494 -3.000 -1.820 1.00 68.67 ? 5 DT A O4 1
ATOM 97 C C5 . DT A 1 5 ? 1.446 -2.648 -4.181 1.00 53.72 ? 5 DT A C5 1
ATOM 98 C C7 . DT A 1 5 ? 1.095 -1.182 -4.056 1.00 62.77 ? 5 DT A C7 1
ATOM 99 C C6 . DT A 1 5 ? 1.587 -3.228 -5.401 1.00 45.98 ? 5 DT A C6 1
ATOM 100 P P . DA A 1 6 ? 0.336 -8.260 -8.692 1.00 68.29 ? 6 DA A P 1
ATOM 101 O OP1 . DA A 1 6 ? 0.858 -8.892 -9.961 1.00 41.14 ? 6 DA A OP1 1
ATOM 102 O OP2 . DA A 1 6 ? -0.778 -7.277 -8.873 1.00 64.92 ? 6 DA A OP2 1
ATOM 103 O "O5'" . DA A 1 6 ? -0.217 -9.331 -7.607 1.00 35.81 ? 6 DA A "O5'" 1
ATOM 104 C "C5'" . DA A 1 6 ? 0.683 -9.960 -6.707 1.00 41.48 ? 6 DA A "C5'" 1
ATOM 105 C "C4'" . DA A 1 6 ? -0.052 -10.473 -5.462 1.00 47.89 ? 6 DA A "C4'" 1
ATOM 106 O "O4'" . DA A 1 6 ? -0.244 -9.468 -4.408 1.00 48.42 ? 6 DA A "O4'" 1
ATOM 107 C "C3'" . DA A 1 6 ? -1.466 -10.940 -5.759 1.00 49.28 ? 6 DA A "C3'" 1
ATOM 108 O "O3'" . DA A 1 6 ? -1.744 -12.078 -4.903 1.00 50.12 ? 6 DA A "O3'" 1
ATOM 109 C "C2'" . DA A 1 6 ? -2.292 -9.678 -5.399 1.00 38.56 ? 6 DA A "C2'" 1
ATOM 110 C "C1'" . DA A 1 6 ? -1.623 -9.388 -4.082 1.00 41.81 ? 6 DA A "C1'" 1
ATOM 111 N N9 . DA A 1 6 ? -1.706 -7.979 -3.699 1.00 37.01 ? 6 DA A N9 1
ATOM 112 C C8 . DA A 1 6 ? -1.769 -6.866 -4.468 1.00 54.33 ? 6 DA A C8 1
ATOM 113 N N7 . DA A 1 6 ? -1.785 -5.751 -3.750 1.00 41.66 ? 6 DA A N7 1
ATOM 114 C C5 . DA A 1 6 ? -1.716 -6.158 -2.430 1.00 14.25 ? 6 DA A C5 1
ATOM 115 C C6 . DA A 1 6 ? -1.691 -5.450 -1.171 1.00 15.44 ? 6 DA A C6 1
ATOM 116 N N6 . DA A 1 6 ? -1.738 -4.095 -0.988 1.00 10.62 ? 6 DA A N6 1
ATOM 117 N N1 . DA A 1 6 ? -1.618 -6.212 -0.030 1.00 23.64 ? 6 DA A N1 1
ATOM 118 C C2 . DA A 1 6 ? -1.566 -7.573 -0.155 1.00 28.99 ? 6 DA A C2 1
ATOM 119 N N3 . DA A 1 6 ? -1.568 -8.319 -1.287 1.00 29.27 ? 6 DA A N3 1
ATOM 120 C C4 . DA A 1 6 ? -1.647 -7.545 -2.391 1.00 24.30 ? 6 DA A C4 1
ATOM 121 P P . DC A 1 7 ? -3.314 -12.315 -4.669 1.00 51.51 ? 7 DC A P 1
ATOM 122 O OP1 . DC A 1 7 ? -3.811 -12.821 -5.990 1.00 34.51 ? 7 DC A OP1 1
ATOM 123 O OP2 . DC A 1 7 ? -3.849 -11.061 -3.982 1.00 45.88 ? 7 DC A OP2 1
ATOM 124 O "O5'" . DC A 1 7 ? -3.474 -13.427 -3.544 1.00 52.71 ? 7 DC A "O5'" 1
ATOM 125 C "C5'" . DC A 1 7 ? -3.153 -13.022 -2.210 1.00 53.28 ? 7 DC A "C5'" 1
ATOM 126 C "C4'" . DC A 1 7 ? -4.251 -12.345 -1.378 1.00 58.07 ? 7 DC A "C4'" 1
ATOM 127 O "O4'" . DC A 1 7 ? -3.833 -11.006 -0.969 1.00 68.36 ? 7 DC A "O4'" 1
ATOM 128 C "C3'" . DC A 1 7 ? -5.645 -12.063 -1.955 1.00 58.21 ? 7 DC A "C3'" 1
ATOM 129 O "O3'" . DC A 1 7 ? -6.513 -13.239 -2.063 1.00 53.78 ? 7 DC A "O3'" 1
ATOM 130 C "C2'" . DC A 1 7 ? -6.168 -11.054 -0.913 1.00 53.43 ? 7 DC A "C2'" 1
ATOM 131 C "C1'" . DC A 1 7 ? -4.938 -10.347 -0.352 1.00 44.92 ? 7 DC A "C1'" 1
ATOM 132 N N1 . DC A 1 7 ? -4.886 -8.823 -0.684 1.00 24.45 ? 7 DC A N1 1
ATOM 133 C C2 . DC A 1 7 ? -4.950 -7.852 0.374 1.00 24.05 ? 7 DC A C2 1
ATOM 134 O O2 . DC A 1 7 ? -5.000 -8.209 1.562 1.00 22.51 ? 7 DC A O2 1
ATOM 135 N N3 . DC A 1 7 ? -4.910 -6.505 0.098 1.00 12.88 ? 7 DC A N3 1
ATOM 136 C C4 . DC A 1 7 ? -4.819 -6.154 -1.203 1.00 38.09 ? 7 DC A C4 1
ATOM 137 N N4 . DC A 1 7 ? -4.770 -4.839 -1.479 1.00 14.52 ? 7 DC A N4 1
ATOM 138 C C5 . DC A 1 7 ? -4.737 -7.116 -2.283 1.00 49.22 ? 7 DC A C5 1
ATOM 139 C C6 . DC A 1 7 ? -4.764 -8.427 -1.993 1.00 37.83 ? 7 DC A C6 1
ATOM 140 P P . DC A 1 8 ? -6.569 -14.565 -1.130 1.00 76.76 ? 8 DC A P 1
ATOM 141 O OP1 . DC A 1 8 ? -5.590 -15.489 -1.788 1.00 61.42 ? 8 DC A OP1 1
ATOM 142 O OP2 . DC A 1 8 ? -7.999 -14.996 -1.059 1.00 80.16 ? 8 DC A OP2 1
ATOM 143 O "O5'" . DC A 1 8 ? -6.170 -14.180 0.407 1.00 51.65 ? 8 DC A "O5'" 1
ATOM 144 C "C5'" . DC A 1 8 ? -6.426 -12.857 0.954 1.00 52.85 ? 8 DC A "C5'" 1
ATOM 145 C "C4'" . DC A 1 8 ? -6.892 -12.669 2.402 1.00 70.27 ? 8 DC A "C4'" 1
ATOM 146 O "O4'" . DC A 1 8 ? -6.997 -11.244 2.790 1.00 56.86 ? 8 DC A "O4'" 1
ATOM 147 C "C3'" . DC A 1 8 ? -8.318 -13.095 2.636 1.00 65.75 ? 8 DC A "C3'" 1
ATOM 148 O "O3'" . DC A 1 8 ? -8.469 -12.979 4.045 1.00 68.74 ? 8 DC A "O3'" 1
ATOM 149 C "C2'" . DC A 1 8 ? -9.092 -11.926 2.037 1.00 63.59 ? 8 DC A "C2'" 1
ATOM 150 C "C1'" . DC A 1 8 ? -8.333 -10.740 2.656 1.00 55.29 ? 8 DC A "C1'" 1
ATOM 151 N N1 . DC A 1 8 ? -8.370 -9.510 1.765 1.00 42.29 ? 8 DC A N1 1
ATOM 152 C C2 . DC A 1 8 ? -8.488 -8.157 2.208 1.00 42.94 ? 8 DC A C2 1
ATOM 153 O O2 . DC A 1 8 ? -8.583 -7.888 3.425 1.00 47.16 ? 8 DC A O2 1
ATOM 154 N N3 . DC A 1 8 ? -8.495 -7.153 1.264 1.00 29.69 ? 8 DC A N3 1
ATOM 155 C C4 . DC A 1 8 ? -8.424 -7.474 -0.042 1.00 27.33 ? 8 DC A C4 1
ATOM 156 N N4 . DC A 1 8 ? -8.427 -6.500 -0.953 1.00 40.23 ? 8 DC A N4 1
ATOM 157 C C5 . DC A 1 8 ? -8.308 -8.815 -0.493 1.00 22.68 ? 8 DC A C5 1
ATOM 158 C C6 . DC A 1 8 ? -8.284 -9.773 0.430 1.00 29.88 ? 8 DC A C6 1
ATOM 159 P P . DG A 1 9 ? -9.945 -13.244 4.594 1.00 68.37 ? 9 DG A P 1
ATOM 160 O OP1 . DG A 1 9 ? -10.026 -14.720 4.762 1.00 90.19 ? 9 DG A OP1 1
ATOM 161 O OP2 . DG A 1 9 ? -10.997 -12.601 3.715 1.00 50.73 ? 9 DG A OP2 1
ATOM 162 O "O5'" . DG A 1 9 ? -9.737 -12.580 6.039 1.00 43.90 ? 9 DG A "O5'" 1
ATOM 163 C "C5'" . DG A 1 9 ? -10.799 -12.462 6.883 1.00 36.06 ? 9 DG A "C5'" 1
ATOM 164 C "C4'" . DG A 1 9 ? -11.689 -11.288 6.464 1.00 52.79 ? 9 DG A "C4'" 1
ATOM 165 O "O4'" . DG A 1 9 ? -11.221 -10.320 5.433 1.00 52.22 ? 9 DG A "O4'" 1
ATOM 166 C "C3'" . DG A 1 9 ? -13.024 -11.861 5.980 1.00 56.82 ? 9 DG A "C3'" 1
ATOM 167 O "O3'" . DG A 1 9 ? -13.967 -11.475 6.934 1.00 59.44 ? 9 DG A "O3'" 1
ATOM 168 C "C2'" . DG A 1 9 ? -13.247 -11.169 4.642 1.00 58.14 ? 9 DG A "C2'" 1
ATOM 169 C "C1'" . DG A 1 9 ? -12.424 -9.889 4.803 1.00 41.97 ? 9 DG A "C1'" 1
ATOM 170 N N9 . DG A 1 9 ? -12.307 -9.287 3.483 1.00 46.09 ? 9 DG A N9 1
ATOM 171 C C8 . DG A 1 9 ? -12.380 -9.990 2.292 1.00 20.80 ? 9 DG A C8 1
ATOM 172 N N7 . DG A 1 9 ? -12.268 -9.194 1.249 1.00 23.54 ? 9 DG A N7 1
ATOM 173 C C5 . DG A 1 9 ? -12.136 -7.916 1.829 1.00 25.41 ? 9 DG A C5 1
ATOM 174 C C6 . DG A 1 9 ? -11.974 -6.670 1.175 1.00 29.87 ? 9 DG A C6 1
ATOM 175 O O6 . DG A 1 9 ? -11.919 -6.451 -0.067 1.00 37.07 ? 9 DG A O6 1
ATOM 176 N N1 . DG A 1 9 ? -11.867 -5.616 2.093 1.00 11.16 ? 9 DG A N1 1
ATOM 177 C C2 . DG A 1 9 ? -11.910 -5.710 3.464 1.00 27.18 ? 9 DG A C2 1
ATOM 178 N N2 . DG A 1 9 ? -11.801 -4.490 4.043 1.00 25.84 ? 9 DG A N2 1
ATOM 179 N N3 . DG A 1 9 ? -12.056 -6.886 4.121 1.00 19.71 ? 9 DG A N3 1
ATOM 180 C C4 . DG A 1 9 ? -12.156 -7.935 3.216 1.00 29.60 ? 9 DG A C4 1
ATOM 181 P P . DG A 1 10 ? -14.527 -9.945 6.953 1.00 73.15 ? 10 DG A P 1
ATOM 182 O OP1 . DG A 1 10 ? -15.013 -9.725 8.376 1.00 52.70 ? 10 DG A OP1 1
ATOM 183 O OP2 . DG A 1 10 ? -15.525 -9.943 5.813 1.00 60.83 ? 10 DG A OP2 1
ATOM 184 O "O5'" . DG A 1 10 ? -13.311 -8.877 6.582 1.00 38.89 ? 10 DG A "O5'" 1
ATOM 185 C "C5'" . DG A 1 10 ? -12.781 -7.936 7.562 1.00 62.20 ? 10 DG A "C5'" 1
ATOM 186 C "C4'" . DG A 1 10 ? -13.697 -6.734 7.852 1.00 62.02 ? 10 DG A "C4'" 1
ATOM 187 O "O4'" . DG A 1 10 ? -13.616 -5.824 6.713 1.00 70.65 ? 10 DG A "O4'" 1
ATOM 188 C "C3'" . DG A 1 10 ? -15.206 -7.035 8.102 1.00 38.97 ? 10 DG A "C3'" 1
ATOM 189 O "O3'" . DG A 1 10 ? -15.511 -7.132 9.531 1.00 47.84 ? 10 DG A "O3'" 1
ATOM 190 C "C2'" . DG A 1 10 ? -15.943 -5.911 7.334 1.00 31.72 ? 10 DG A "C2'" 1
ATOM 191 C "C1'" . DG A 1 10 ? -14.931 -5.547 6.240 1.00 46.10 ? 10 DG A "C1'" 1
ATOM 192 N N9 . DG A 1 10 ? -15.024 -6.301 4.994 1.00 42.80 ? 10 DG A N9 1
ATOM 193 C C8 . DG A 1 10 ? -15.085 -7.661 4.772 1.00 51.17 ? 10 DG A C8 1
ATOM 194 N N7 . DG A 1 10 ? -15.145 -8.025 3.502 1.00 39.79 ? 10 DG A N7 1
ATOM 195 C C5 . DG A 1 10 ? -15.101 -6.812 2.830 1.00 25.07 ? 10 DG A C5 1
ATOM 196 C C6 . DG A 1 10 ? -15.122 -6.521 1.441 1.00 31.23 ? 10 DG A C6 1
ATOM 197 O O6 . DG A 1 10 ? -15.194 -7.302 0.492 1.00 34.82 ? 10 DG A O6 1
ATOM 198 N N1 . DG A 1 10 ? -15.074 -5.156 1.173 1.00 41.01 ? 10 DG A N1 1
ATOM 199 C C2 . DG A 1 10 ? -15.001 -4.174 2.172 1.00 36.87 ? 10 DG A C2 1
ATOM 200 N N2 . DG A 1 10 ? -14.962 -2.888 1.762 1.00 21.92 ? 10 DG A N2 1
ATOM 201 N N3 . DG A 1 10 ? -14.965 -4.426 3.489 1.00 29.51 ? 10 DG A N3 1
ATOM 202 C C4 . DG A 1 10 ? -15.027 -5.752 3.737 1.00 33.94 ? 10 DG A C4 1
ATOM 203 O "O5'" . DC B 1 1 ? -17.371 -1.685 -6.834 1.00 76.01 ? 1 DC B "O5'" 1
ATOM 204 C "C5'" . DC B 1 1 ? -17.081 -1.857 -5.409 1.00 55.80 ? 1 DC B "C5'" 1
ATOM 205 C "C4'" . DC B 1 1 ? -16.367 -0.684 -4.722 1.00 63.53 ? 1 DC B "C4'" 1
ATOM 206 O "O4'" . DC B 1 1 ? -15.869 -0.992 -3.382 1.00 57.96 ? 1 DC B "O4'" 1
ATOM 207 C "C3'" . DC B 1 1 ? -15.120 -0.117 -5.394 1.00 39.38 ? 1 DC B "C3'" 1
ATOM 208 O "O3'" . DC B 1 1 ? -15.011 1.244 -4.939 1.00 40.56 ? 1 DC B "O3'" 1
ATOM 209 C "C2'" . DC B 1 1 ? -14.002 -1.011 -4.860 1.00 24.10 ? 1 DC B "C2'" 1
ATOM 210 C "C1'" . DC B 1 1 ? -14.461 -1.266 -3.429 1.00 36.37 ? 1 DC B "C1'" 1
ATOM 211 N N1 . DC B 1 1 ? -14.399 -2.691 -2.988 1.00 21.94 ? 1 DC B N1 1
ATOM 212 C C2 . DC B 1 1 ? -14.581 -2.968 -1.609 1.00 35.22 ? 1 DC B C2 1
ATOM 213 O O2 . DC B 1 1 ? -14.729 -1.989 -0.858 1.00 39.83 ? 1 DC B O2 1
ATOM 214 N N3 . DC B 1 1 ? -14.613 -4.271 -1.134 1.00 26.63 ? 1 DC B N3 1
ATOM 215 C C4 . DC B 1 1 ? -14.463 -5.285 -2.003 1.00 27.92 ? 1 DC B C4 1
ATOM 216 N N4 . DC B 1 1 ? -14.484 -6.528 -1.492 1.00 43.17 ? 1 DC B N4 1
ATOM 217 C C5 . DC B 1 1 ? -14.282 -5.038 -3.418 1.00 27.04 ? 1 DC B C5 1
ATOM 218 C C6 . DC B 1 1 ? -14.271 -3.746 -3.864 1.00 30.74 ? 1 DC B C6 1
ATOM 219 P P . DC B 1 2 ? -13.568 1.927 -4.747 1.00 66.57 ? 2 DC B P 1
ATOM 220 O OP1 . DC B 1 2 ? -13.728 3.407 -4.548 1.00 64.56 ? 2 DC B OP1 1
ATOM 221 O OP2 . DC B 1 2 ? -12.740 1.497 -5.907 1.00 50.71 ? 2 DC B OP2 1
ATOM 222 O "O5'" . DC B 1 2 ? -13.055 1.173 -3.401 1.00 49.77 ? 2 DC B "O5'" 1
ATOM 223 C "C5'" . DC B 1 2 ? -13.517 1.468 -2.058 1.00 48.33 ? 2 DC B "C5'" 1
ATOM 224 C "C4'" . DC B 1 2 ? -12.499 2.246 -1.197 1.00 46.24 ? 2 DC B "C4'" 1
ATOM 225 O "O4'" . DC B 1 2 ? -12.168 1.574 0.055 1.00 50.33 ? 2 DC B "O4'" 1
ATOM 226 C "C3'" . DC B 1 2 ? -11.150 2.582 -1.812 1.00 41.64 ? 2 DC B "C3'" 1
ATOM 227 O "O3'" . DC B 1 2 ? -10.766 3.831 -1.243 1.00 43.91 ? 2 DC B "O3'" 1
ATOM 228 C "C2'" . DC B 1 2 ? -10.246 1.456 -1.307 1.00 44.24 ? 2 DC B "C2'" 1
ATOM 229 C "C1'" . DC B 1 2 ? -10.904 0.955 0.004 1.00 36.99 ? 2 DC B "C1'" 1
ATOM 230 N N1 . DC B 1 2 ? -11.024 -0.498 -0.163 1.00 33.34 ? 2 DC B N1 1
ATOM 231 C C2 . DC B 1 2 ? -11.124 -1.505 0.845 1.00 37.17 ? 2 DC B C2 1
ATOM 232 O O2 . DC B 1 2 ? -11.175 -1.254 2.108 1.00 51.95 ? 2 DC B O2 1
ATOM 233 N N3 . DC B 1 2 ? -11.197 -2.797 0.401 1.00 40.21 ? 2 DC B N3 1
ATOM 234 C C4 . DC B 1 2 ? -11.160 -3.065 -0.923 1.00 48.42 ? 2 DC B C4 1
ATOM 235 N N4 . DC B 1 2 ? -11.238 -4.368 -1.241 1.00 56.54 ? 2 DC B N4 1
ATOM 236 C C5 . DC B 1 2 ? -11.050 -2.059 -1.937 1.00 49.65 ? 2 DC B C5 1
ATOM 237 C C6 . DC B 1 2 ? -10.983 -0.811 -1.515 1.00 31.88 ? 2 DC B C6 1
ATOM 238 P P . DG B 1 3 ? -9.473 3.950 -0.273 1.00 58.76 ? 3 DG B P 1
ATOM 239 O OP1 . DG B 1 3 ? -9.268 5.398 -0.034 1.00 58.08 ? 3 DG B OP1 1
ATOM 240 O OP2 . DG B 1 3 ? -8.304 3.234 -0.844 1.00 75.75 ? 3 DG B OP2 1
ATOM 241 O "O5'" . DG B 1 3 ? -9.882 3.182 1.093 1.00 56.78 ? 3 DG B "O5'" 1
ATOM 242 C "C5'" . DG B 1 3 ? -9.261 3.591 2.341 1.00 65.33 ? 3 DG B "C5'" 1
ATOM 243 C "C4'" . DG B 1 3 ? -8.861 2.511 3.357 1.00 70.38 ? 3 DG B "C4'" 1
ATOM 244 O "O4'" . DG B 1 3 ? -8.973 1.146 2.830 1.00 46.60 ? 3 DG B "O4'" 1
ATOM 245 C "C3'" . DG B 1 3 ? -7.429 2.676 3.892 1.00 62.20 ? 3 DG B "C3'" 1
ATOM 246 O "O3'" . DG B 1 3 ? -7.308 2.499 5.389 1.00 62.55 ? 3 DG B "O3'" 1
ATOM 247 C "C2'" . DG B 1 3 ? -6.749 1.621 3.000 1.00 54.60 ? 3 DG B "C2'" 1
ATOM 248 C "C1'" . DG B 1 3 ? -7.760 0.463 3.025 1.00 33.57 ? 3 DG B "C1'" 1
ATOM 249 N N9 . DG B 1 3 ? -7.736 -0.492 1.928 1.00 33.79 ? 3 DG B N9 1
ATOM 250 C C8 . DG B 1 3 ? -7.685 -0.176 0.583 1.00 34.12 ? 3 DG B C8 1
ATOM 251 N N7 . DG B 1 3 ? -7.721 -1.238 -0.201 1.00 39.88 ? 3 DG B N7 1
ATOM 252 C C5 . DG B 1 3 ? -7.808 -2.329 0.687 1.00 42.40 ? 3 DG B C5 1
ATOM 253 C C6 . DG B 1 3 ? -7.859 -3.751 0.430 1.00 56.90 ? 3 DG B C6 1
ATOM 254 O O6 . DG B 1 3 ? -7.843 -4.291 -0.691 1.00 56.61 ? 3 DG B O6 1
ATOM 255 N N1 . DG B 1 3 ? -7.940 -4.567 1.607 1.00 27.60 ? 3 DG B N1 1
ATOM 256 C C2 . DG B 1 3 ? -7.929 -4.021 2.903 1.00 31.35 ? 3 DG B C2 1
ATOM 257 N N2 . DG B 1 3 ? -8.007 -4.905 3.920 1.00 36.64 ? 3 DG B N2 1
ATOM 258 N N3 . DG B 1 3 ? -7.887 -2.688 3.137 1.00 25.99 ? 3 DG B N3 1
ATOM 259 C C4 . DG B 1 3 ? -7.820 -1.887 2.010 1.00 24.26 ? 3 DG B C4 1
ATOM 260 P P . DG B 1 4 ? -6.014 2.819 6.346 1.00 67.24 ? 4 DG B P 1
ATOM 261 O OP1 . DG B 1 4 ? -6.380 3.746 7.451 1.00 53.29 ? 4 DG B OP1 1
ATOM 262 O OP2 . DG B 1 4 ? -4.885 3.141 5.428 1.00 68.06 ? 4 DG B OP2 1
ATOM 263 O "O5'" . DG B 1 4 ? -5.693 1.419 7.078 1.00 45.87 ? 4 DG B "O5'" 1
ATOM 264 C "C5'" . DG B 1 4 ? -6.789 0.479 6.944 1.00 44.53 ? 4 DG B "C5'" 1
ATOM 265 C "C4'" . DG B 1 4 ? -6.274 -0.866 7.451 1.00 37.30 ? 4 DG B "C4'" 1
ATOM 266 O "O4'" . DG B 1 4 ? -6.183 -1.785 6.303 1.00 43.51 ? 4 DG B "O4'" 1
ATOM 267 C "C3'" . DG B 1 4 ? -4.879 -0.647 7.937 1.00 36.37 ? 4 DG B "C3'" 1
ATOM 268 O "O3'" . DG B 1 4 ? -4.582 -1.747 8.773 1.00 43.64 ? 4 DG B "O3'" 1
ATOM 269 C "C2'" . DG B 1 4 ? -4.116 -0.682 6.601 1.00 32.44 ? 4 DG B "C2'" 1
ATOM 270 C "C1'" . DG B 1 4 ? -4.799 -1.855 5.894 1.00 46.88 ? 4 DG B "C1'" 1
ATOM 271 N N9 . DG B 1 4 ? -4.821 -1.839 4.413 1.00 50.15 ? 4 DG B N9 1
ATOM 272 C C8 . DG B 1 4 ? -4.865 -0.729 3.591 1.00 51.64 ? 4 DG B C8 1
ATOM 273 N N7 . DG B 1 4 ? -4.897 -1.010 2.305 1.00 31.78 ? 4 DG B N7 1
ATOM 274 C C5 . DG B 1 4 ? -4.865 -2.391 2.286 1.00 16.86 ? 4 DG B C5 1
ATOM 275 C C6 . DG B 1 4 ? -4.874 -3.240 1.165 1.00 28.04 ? 4 DG B C6 1
ATOM 276 O O6 . DG B 1 4 ? -4.927 -2.846 -0.039 1.00 33.77 ? 4 DG B O6 1
ATOM 277 N N1 . DG B 1 4 ? -4.820 -4.595 1.530 1.00 12.42 ? 4 DG B N1 1
ATOM 278 C C2 . DG B 1 4 ? -4.776 -5.020 2.864 1.00 20.18 ? 4 DG B C2 1
ATOM 279 N N2 . DG B 1 4 ? -4.723 -6.383 2.962 1.00 14.01 ? 4 DG B N2 1
ATOM 280 N N3 . DG B 1 4 ? -4.779 -4.221 3.946 1.00 11.00 ? 4 DG B N3 1
ATOM 281 C C4 . DG B 1 4 ? -4.819 -2.922 3.541 1.00 8.08 ? 4 DG B C4 1
ATOM 282 P P . DT B 1 5 ? -3.010 -1.862 9.115 1.00 56.02 ? 5 DT B P 1
ATOM 283 O OP1 . DT B 1 5 ? -2.860 -2.116 10.572 1.00 40.56 ? 5 DT B OP1 1
ATOM 284 O OP2 . DT B 1 5 ? -2.370 -0.603 8.588 1.00 31.18 ? 5 DT B OP2 1
ATOM 285 O "O5'" . DT B 1 5 ? -2.657 -3.193 8.251 1.00 31.92 ? 5 DT B "O5'" 1
ATOM 286 C "C5'" . DT B 1 5 ? -2.876 -4.477 8.899 1.00 26.94 ? 5 DT B "C5'" 1
ATOM 287 C "C4'" . DT B 1 5 ? -3.073 -5.583 7.884 1.00 27.68 ? 5 DT B "C4'" 1
ATOM 288 O "O4'" . DT B 1 5 ? -2.604 -4.983 6.677 1.00 48.47 ? 5 DT B "O4'" 1
ATOM 289 C "C3'" . DT B 1 5 ? -2.077 -6.719 7.886 1.00 28.68 ? 5 DT B "C3'" 1
ATOM 290 O "O3'" . DT B 1 5 ? -1.885 -7.772 8.728 1.00 33.17 ? 5 DT B "O3'" 1
ATOM 291 C "C2'" . DT B 1 5 ? -1.904 -7.244 6.440 1.00 39.72 ? 5 DT B "C2'" 1
ATOM 292 C "C1'" . DT B 1 5 ? -2.564 -6.063 5.751 1.00 49.67 ? 5 DT B "C1'" 1
ATOM 293 N N1 . DT B 1 5 ? -2.054 -5.527 4.486 1.00 32.23 ? 5 DT B N1 1
ATOM 294 C C2 . DT B 1 5 ? -1.741 -6.292 3.378 1.00 30.17 ? 5 DT B C2 1
ATOM 295 O O2 . DT B 1 5 ? -1.739 -7.508 3.332 1.00 33.32 ? 5 DT B O2 1
ATOM 296 N N3 . DT B 1 5 ? -1.380 -5.528 2.293 1.00 21.39 ? 5 DT B N3 1
ATOM 297 C C4 . DT B 1 5 ? -1.324 -4.128 2.271 1.00 28.08 ? 5 DT B C4 1
ATOM 298 O O4 . DT B 1 5 ? -0.981 -3.510 1.265 1.00 28.42 ? 5 DT B O4 1
ATOM 299 C C5 . DT B 1 5 ? -1.673 -3.415 3.470 1.00 19.99 ? 5 DT B C5 1
ATOM 300 C C7 . DT B 1 5 ? -1.608 -1.915 3.536 1.00 26.42 ? 5 DT B C7 1
ATOM 301 C C6 . DT B 1 5 ? -2.023 -4.156 4.493 1.00 24.71 ? 5 DT B C6 1
ATOM 302 P P . DA B 1 6 ? -0.548 -7.929 9.113 1.00 59.97 ? 6 DA B P 1
ATOM 303 O OP1 . DA B 1 6 ? -0.516 -8.421 10.512 1.00 49.25 ? 6 DA B OP1 1
ATOM 304 O OP2 . DA B 1 6 ? 0.107 -6.604 8.912 1.00 47.70 ? 6 DA B OP2 1
ATOM 305 O "O5'" . DA B 1 6 ? -0.080 -8.776 8.059 1.00 44.23 ? 6 DA B "O5'" 1
ATOM 306 C "C5'" . DA B 1 6 ? -0.354 -10.122 7.772 1.00 36.00 ? 6 DA B "C5'" 1
ATOM 307 C "C4'" . DA B 1 6 ? 0.172 -10.372 6.377 1.00 30.70 ? 6 DA B "C4'" 1
ATOM 308 O "O4'" . DA B 1 6 ? 0.246 -9.147 5.606 1.00 41.09 ? 6 DA B "O4'" 1
ATOM 309 C "C3'" . DA B 1 6 ? 1.608 -10.801 6.384 1.00 34.74 ? 6 DA B "C3'" 1
ATOM 310 O "O3'" . DA B 1 6 ? 1.616 -12.210 6.749 1.00 44.92 ? 6 DA B "O3'" 1
ATOM 311 C "C2'" . DA B 1 6 ? 2.082 -10.343 4.965 1.00 44.69 ? 6 DA B "C2'" 1
ATOM 312 C "C1'" . DA B 1 6 ? 0.950 -9.471 4.424 1.00 31.73 ? 6 DA B "C1'" 1
ATOM 313 N N9 . DA B 1 6 ? 1.212 -8.177 3.774 1.00 35.53 ? 6 DA B N9 1
ATOM 314 C C8 . DA B 1 6 ? 1.118 -6.957 4.411 1.00 30.56 ? 6 DA B C8 1
ATOM 315 N N7 . DA B 1 6 ? 1.343 -5.922 3.625 1.00 33.75 ? 6 DA B N7 1
ATOM 316 C C5 . DA B 1 6 ? 1.602 -6.474 2.360 1.00 26.43 ? 6 DA B C5 1
ATOM 317 C C6 . DA B 1 6 ? 1.906 -5.879 1.098 1.00 15.81 ? 6 DA B C6 1
ATOM 318 N N6 . DA B 1 6 ? 2.020 -4.553 0.854 1.00 39.86 ? 6 DA B N6 1
ATOM 319 N N1 . DA B 1 6 ? 2.094 -6.677 0.025 1.00 31.13 ? 6 DA B N1 1
ATOM 320 C C2 . DA B 1 6 ? 1.985 -7.997 0.238 1.00 49.96 ? 6 DA B C2 1
ATOM 321 N N3 . DA B 1 6 ? 1.698 -8.685 1.380 1.00 50.04 ? 6 DA B N3 1
ATOM 322 C C4 . DA B 1 6 ? 1.509 -7.860 2.433 1.00 40.97 ? 6 DA B C4 1
ATOM 323 P P . DC B 1 7 ? 2.942 -13.150 6.645 1.00 74.61 ? 7 DC B P 1
ATOM 324 O OP1 . DC B 1 7 ? 2.918 -14.233 7.670 1.00 57.06 ? 7 DC B OP1 1
ATOM 325 O OP2 . DC B 1 7 ? 4.144 -12.284 6.551 1.00 62.89 ? 7 DC B OP2 1
ATOM 326 O "O5'" . DC B 1 7 ? 2.824 -13.787 5.164 1.00 62.38 ? 7 DC B "O5'" 1
ATOM 327 C "C5'" . DC B 1 7 ? 2.622 -12.952 4.000 1.00 53.01 ? 7 DC B "C5'" 1
ATOM 328 C "C4'" . DC B 1 7 ? 3.714 -12.918 2.889 1.00 71.11 ? 7 DC B "C4'" 1
ATOM 329 O "O4'" . DC B 1 7 ? 3.759 -11.606 2.249 1.00 80.69 ? 7 DC B "O4'" 1
ATOM 330 C "C3'" . DC B 1 7 ? 5.176 -13.278 3.168 1.00 68.29 ? 7 DC B "C3'" 1
ATOM 331 O "O3'" . DC B 1 7 ? 5.394 -14.621 2.632 1.00 61.68 ? 7 DC B "O3'" 1
ATOM 332 C "C2'" . DC B 1 7 ? 5.998 -12.192 2.436 1.00 62.23 ? 7 DC B "C2'" 1
ATOM 333 C "C1'" . DC B 1 7 ? 4.989 -11.440 1.522 1.00 64.57 ? 7 DC B "C1'" 1
ATOM 334 N N1 . DC B 1 7 ? 5.175 -9.940 1.438 1.00 47.64 ? 7 DC B N1 1
ATOM 335 C C2 . DC B 1 7 ? 5.490 -9.105 0.266 1.00 63.17 ? 7 DC B C2 1
ATOM 336 O O2 . DC B 1 7 ? 5.681 -9.644 -0.842 1.00 57.30 ? 7 DC B O2 1
ATOM 337 N N3 . DC B 1 7 ? 5.584 -7.721 0.390 1.00 43.60 ? 7 DC B N3 1
ATOM 338 C C4 . DC B 1 7 ? 5.365 -7.218 1.676 1.00 52.93 ? 7 DC B C4 1
ATOM 339 N N4 . DC B 1 7 ? 5.460 -5.864 1.877 1.00 38.25 ? 7 DC B N4 1
ATOM 340 C C5 . DC B 1 7 ? 5.026 -8.039 2.868 1.00 49.64 ? 7 DC B C5 1
ATOM 341 C C6 . DC B 1 7 ? 4.946 -9.365 2.680 1.00 50.89 ? 7 DC B C6 1
ATOM 342 P P . DC B 1 8 ? 6.770 -15.225 2.030 1.00 72.23 ? 8 DC B P 1
ATOM 343 O OP1 . DC B 1 8 ? 6.469 -16.687 1.884 1.00 69.49 ? 8 DC B OP1 1
ATOM 344 O OP2 . DC B 1 8 ? 7.954 -14.830 2.871 1.00 69.94 ? 8 DC B OP2 1
ATOM 345 O "O5'" . DC B 1 8 ? 6.946 -14.451 0.578 1.00 68.82 ? 8 DC B "O5'" 1
ATOM 346 C "C5'" . DC B 1 8 ? 6.072 -14.406 -0.636 1.00 57.01 ? 8 DC B "C5'" 1
ATOM 347 C "C4'" . DC B 1 8 ? 6.723 -13.858 -1.969 1.00 46.48 ? 8 DC B "C4'" 1
ATOM 348 O "O4'" . DC B 1 8 ? 6.839 -12.404 -1.937 1.00 56.11 ? 8 DC B "O4'" 1
ATOM 349 C "C3'" . DC B 1 8 ? 8.145 -14.328 -2.406 1.00 53.92 ? 8 DC B "C3'" 1
ATOM 350 O "O3'" . DC B 1 8 ? 8.499 -14.182 -3.852 1.00 62.51 ? 8 DC B "O3'" 1
ATOM 351 C "C2'" . DC B 1 8 ? 8.999 -13.352 -1.608 1.00 49.90 ? 8 DC B "C2'" 1
ATOM 352 C "C1'" . DC B 1 8 ? 8.246 -12.058 -2.041 1.00 78.97 ? 8 DC B "C1'" 1
ATOM 353 N N1 . DC B 1 8 ? 8.715 -10.772 -1.186 1.00 79.30 ? 8 DC B N1 1
ATOM 354 C C2 . DC B 1 8 ? 8.763 -9.413 -1.710 1.00 71.00 ? 8 DC B C2 1
ATOM 355 O O2 . DC B 1 8 ? 8.420 -9.063 -2.924 1.00 50.35 ? 8 DC B O2 1
ATOM 356 N N3 . DC B 1 8 ? 9.199 -8.377 -0.837 1.00 64.99 ? 8 DC B N3 1
ATOM 357 C C4 . DC B 1 8 ? 9.560 -8.676 0.474 1.00 75.40 ? 8 DC B C4 1
ATOM 358 N N4 . DC B 1 8 ? 9.849 -7.626 1.281 1.00 74.97 ? 8 DC B N4 1
ATOM 359 C C5 . DC B 1 8 ? 9.536 -10.039 0.998 1.00 64.30 ? 8 DC B C5 1
ATOM 360 C C6 . DC B 1 8 ? 9.115 -11.018 0.158 1.00 70.60 ? 8 DC B C6 1
ATOM 361 P P . DG B 1 9 ? 9.721 -15.025 -4.577 1.00 78.51 ? 9 DG B P 1
ATOM 362 O OP1 . DG B 1 9 ? 9.209 -16.448 -4.772 1.00 57.74 ? 9 DG B OP1 1
ATOM 363 O OP2 . DG B 1 9 ? 10.898 -14.709 -3.722 1.00 73.49 ? 9 DG B OP2 1
ATOM 364 O "O5'" . DG B 1 9 ? 10.066 -14.368 -6.051 1.00 38.89 ? 9 DG B "O5'" 1
ATOM 365 C "C5'" . DG B 1 9 ? 9.840 -12.991 -6.496 1.00 47.11 ? 9 DG B "C5'" 1
ATOM 366 C "C4'" . DG B 1 9 ? 10.956 -12.054 -6.006 1.00 66.46 ? 9 DG B "C4'" 1
ATOM 367 O "O4'" . DG B 1 9 ? 10.880 -11.802 -4.542 1.00 55.53 ? 9 DG B "O4'" 1
ATOM 368 C "C3'" . DG B 1 9 ? 12.416 -12.497 -6.349 1.00 71.38 ? 9 DG B "C3'" 1
ATOM 369 O "O3'" . DG B 1 9 ? 13.245 -11.585 -7.286 1.00 63.73 ? 9 DG B "O3'" 1
ATOM 370 C "C2'" . DG B 1 9 ? 13.037 -12.643 -4.915 1.00 64.60 ? 9 DG B "C2'" 1
ATOM 371 C "C1'" . DG B 1 9 ? 12.230 -11.514 -4.169 1.00 52.48 ? 9 DG B "C1'" 1
ATOM 372 N N9 . DG B 1 9 ? 12.432 -11.105 -2.735 1.00 52.24 ? 9 DG B N9 1
ATOM 373 C C8 . DG B 1 9 ? 12.693 -11.829 -1.582 1.00 54.54 ? 9 DG B C8 1
ATOM 374 N N7 . DG B 1 9 ? 12.788 -11.111 -0.485 1.00 29.15 ? 9 DG B N7 1
ATOM 375 C C5 . DG B 1 9 ? 12.585 -9.810 -0.935 1.00 34.00 ? 9 DG B C5 1
ATOM 376 C C6 . DG B 1 9 ? 12.566 -8.577 -0.230 1.00 36.70 ? 9 DG B C6 1
ATOM 377 O O6 . DG B 1 9 ? 12.744 -8.453 0.996 1.00 50.42 ? 9 DG B O6 1
ATOM 378 N N1 . DG B 1 9 ? 12.306 -7.458 -1.051 1.00 22.82 ? 9 DG B N1 1
ATOM 379 C C2 . DG B 1 9 ? 12.119 -7.571 -2.427 1.00 34.33 ? 9 DG B C2 1
ATOM 380 N N2 . DG B 1 9 ? 11.874 -6.469 -3.198 1.00 30.24 ? 9 DG B N2 1
ATOM 381 N N3 . DG B 1 9 ? 12.143 -8.718 -3.077 1.00 43.19 ? 9 DG B N3 1
ATOM 382 C C4 . DG B 1 9 ? 12.364 -9.790 -2.292 1.00 48.18 ? 9 DG B C4 1
ATOM 383 P P . DG B 1 10 ? 12.791 -10.564 -8.491 1.00 91.09 ? 10 DG B P 1
ATOM 384 O OP1 . DG B 1 10 ? 11.535 -9.813 -8.128 1.00 62.52 ? 10 DG B OP1 1
ATOM 385 O OP2 . DG B 1 10 ? 12.878 -11.385 -9.734 1.00 82.12 ? 10 DG B OP2 1
ATOM 386 O "O5'" . DG B 1 10 ? 13.959 -9.441 -8.592 1.00 74.12 ? 10 DG B "O5'" 1
ATOM 387 C "C5'" . DG B 1 10 ? 13.884 -8.165 -7.835 1.00 67.67 ? 10 DG B "C5'" 1
ATOM 388 C "C4'" . DG B 1 10 ? 14.517 -6.937 -8.536 1.00 67.26 ? 10 DG B "C4'" 1
ATOM 389 O "O4'" . DG B 1 10 ? 14.662 -5.667 -7.765 1.00 64.08 ? 10 DG B "O4'" 1
ATOM 390 C "C3'" . DG B 1 10 ? 15.925 -7.099 -9.046 1.00 47.69 ? 10 DG B "C3'" 1
ATOM 391 O "O3'" . DG B 1 10 ? 15.880 -6.294 -10.220 1.00 64.82 ? 10 DG B "O3'" 1
ATOM 392 C "C2'" . DG B 1 10 ? 16.820 -6.464 -7.945 1.00 43.69 ? 10 DG B "C2'" 1
ATOM 393 C "C1'" . DG B 1 10 ? 15.897 -5.608 -7.065 1.00 41.81 ? 10 DG B "C1'" 1
ATOM 394 N N9 . DG B 1 10 ? 15.701 -6.187 -5.710 1.00 39.47 ? 10 DG B N9 1
ATOM 395 C C8 . DG B 1 10 ? 15.587 -7.555 -5.467 1.00 37.65 ? 10 DG B C8 1
ATOM 396 N N7 . DG B 1 10 ? 15.396 -7.890 -4.211 1.00 46.75 ? 10 DG B N7 1
ATOM 397 C C5 . DG B 1 10 ? 15.389 -6.669 -3.524 1.00 38.50 ? 10 DG B C5 1
ATOM 398 C C6 . DG B 1 10 ? 15.205 -6.436 -2.122 1.00 46.65 ? 10 DG B C6 1
ATOM 399 O O6 . DG B 1 10 ? 15.035 -7.310 -1.249 1.00 53.67 ? 10 DG B O6 1
ATOM 400 N N1 . DG B 1 10 ? 15.230 -5.066 -1.769 1.00 37.59 ? 10 DG B N1 1
ATOM 401 C C2 . DG B 1 10 ? 15.402 -4.035 -2.703 1.00 46.39 ? 10 DG B C2 1
ATOM 402 N N2 . DG B 1 10 ? 15.425 -2.757 -2.206 1.00 36.73 ? 10 DG B N2 1
ATOM 403 N N3 . DG B 1 10 ? 15.587 -4.273 -4.035 1.00 38.46 ? 10 DG B N3 1
ATOM 404 C C4 . DG B 1 10 ? 15.562 -5.603 -4.417 1.00 43.52 ? 10 DG B C4 1
HETATM 405 CO CO . CO C 2 . ? 6.424 0.181 1.604 1.00 53.36 ? 11 CO A CO 1
HETATM 406 CO CO . CO D 2 . ? -6.527 0.015 -2.032 1.00 46.85 ? 11 CO B CO 1
HETATM 407 CO CO . CO E 2 . ? 12.973 -11.355 2.057 1.00 56.81 ? 12 CO B CO 1
HETATM 408 O O . HOH F 3 . ? -15.265 -9.552 1.525 1.00 36.10 ? 12 HOH A O 1
HETATM 409 O O . HOH F 3 . ? 5.689 -1.917 1.520 1.00 32.38 ? 13 HOH A O 1
HETATM 410 O O . HOH F 3 . ? -12.764 -11.493 0.270 1.00 45.15 ? 14 HOH A O 1
HETATM 411 O O . HOH F 3 . ? -12.256 -3.404 7.231 1.00 39.91 ? 15 HOH A O 1
HETATM 412 O O . HOH G 3 . ? 14.876 -9.707 -2.647 1.00 29.33 ? 13 HOH B O 1
HETATM 413 O O . HOH G 3 . ? -6.104 -2.247 -2.646 1.00 32.12 ? 14 HOH B O 1
HETATM 414 O O . HOH G 3 . ? 13.332 -13.476 0.311 1.00 37.89 ? 15 HOH B O 1
HETATM 415 O O . HOH G 3 . ? -16.696 -1.042 -9.445 1.00 36.73 ? 16 HOH B O 1
HETATM 416 O O . HOH G 3 . ? -4.149 6.046 10.230 1.00 48.17 ? 17 HOH B O 1
HETATM 417 O O . HOH G 3 . ? 9.497 -17.288 7.032 1.00 42.50 ? 18 HOH B O 1
HETATM 418 O O . HOH G 3 . ? 10.506 -19.089 -0.354 1.00 28.19 ? 19 HOH B O 1
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