data_3QSC
#
_entry.id 3QSC
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.379
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 3QSC pdb_00003qsc 10.2210/pdb3qsc/pdb
NDB NA0987 ? ?
RCSB RCSB064041 ? ?
WWPDB D_1000064041 ? ?
#
loop_
_pdbx_database_related.db_name
_pdbx_database_related.db_id
_pdbx_database_related.details
_pdbx_database_related.content_type
PDB 3CE5 'The same human telomeric G-quadruplex bound to an acridine ligand (Braco19)' unspecified
PDB 3CCO 'The same human telomeric G-quadruplex bound to a nathphalene diimde ligand' unspecified
PDB 3CDM 'The same human telomeric G-quadruplex bound to a nathphalene diimde ligand' unspecified
PDB 1KF1 'The same human telomeric G-quadruplex in its native (ligand-free) form.' unspecified
PDB 1K8P 'The same human telomeric G-quadruplex in its native (ligand-free) form.' unspecified
PDB 2HRI 'The same human telomeric G-quadruplex bound to a porphyrin ligand' unspecified
PDB 3qsf . unspecified
#
_pdbx_database_status.entry_id 3QSC
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.recvd_initial_deposition_date 2011-02-21
_pdbx_database_status.status_code REL
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.SG_entry ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_nmr_data ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Campbell, N.H.' 1
'Abd Karim, N.H.' 2
'Parkinson, G.N.' 3
'Vilar, R.' 4
'Neidle, S.' 5
#
_citation.id primary
_citation.title
'Molecular basis of structure-activity relationships between salphen metal complexes and human telomeric DNA quadruplexes.'
_citation.journal_abbrev J.Med.Chem.
_citation.journal_volume 55
_citation.page_first 209
_citation.page_last 222
_citation.year 2012
_citation.journal_id_ASTM JMCMAR
_citation.country US
_citation.journal_id_ISSN 0022-2623
_citation.journal_id_CSD 0151
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 22112241
_citation.pdbx_database_id_DOI 10.1021/jm201140v
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Campbell, N.H.' 1 ?
primary 'Karim, N.H.' 2 ?
primary 'Parkinson, G.N.' 3 ?
primary 'Gunaratnam, M.' 4 ?
primary 'Petrucci, V.' 5 ?
primary 'Todd, A.K.' 6 ?
primary 'Vilar, R.' 7 ?
primary 'Neidle, S.' 8 ?
#
_cell.length_a 43.753
_cell.length_b 54.786
_cell.length_c 33.430
_cell.angle_alpha 90.000
_cell.angle_beta 90.000
_cell.angle_gamma 90.000
_cell.entry_id 3QSC
_cell.pdbx_unique_axis ?
_cell.Z_PDB 8
_cell.length_a_esd ?
_cell.length_b_esd ?
_cell.length_c_esd ?
_cell.angle_alpha_esd ?
_cell.angle_beta_esd ?
_cell.angle_gamma_esd ?
#
_symmetry.space_group_name_H-M 'C 2 2 2'
_symmetry.entry_id 3QSC
_symmetry.Int_Tables_number 21
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.space_group_name_Hall ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn "5'-D(*AP*GP*GP*GP*TP*(BRU)P*AP*GP*GP*GP*TP*T)-3'" 3838.332 1 ? ? ? 'Human telomeric G-quadruplex DNA'
2 non-polymer syn 'POTASSIUM ION' 39.098 3 ? ? ? ?
3 non-polymer syn
;[2,2'-{(4,5-difluorobenzene-1,2-diyl)bis[(nitrilo-kappaN)methylylidene]}bis{5-[2-(piperidin-1-yl)ethoxy]phenolato-kappaO}(2-)]copper (II)
;
668.233 1 ? ? ? ?
4 water nat water 18.015 27 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type polydeoxyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer yes
_entity_poly.pdbx_seq_one_letter_code '(DA)(DG)(DG)(DG)(DT)(BRU)(DA)(DG)(DG)(DG)(DT)(DT)'
_entity_poly.pdbx_seq_one_letter_code_can AGGGTUAGGGTT
_entity_poly.pdbx_strand_id X
_entity_poly.pdbx_target_identifier ?
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 DA n
1 2 DG n
1 3 DG n
1 4 DG n
1 5 DT n
1 6 BRU n
1 7 DA n
1 8 DG n
1 9 DG n
1 10 DG n
1 11 DT n
1 12 DT n
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num ?
_pdbx_entity_src_syn.pdbx_end_seq_num ?
_pdbx_entity_src_syn.organism_scientific ?
_pdbx_entity_src_syn.organism_common_name ?
_pdbx_entity_src_syn.ncbi_taxonomy_id ?
_pdbx_entity_src_syn.details 'This sequence occurs naturally in humans'
#
_struct_ref.id 1
_struct_ref.db_name PDB
_struct_ref.db_code 3QSC
_struct_ref.pdbx_db_accession 3QSC
_struct_ref.entity_id 1
_struct_ref.pdbx_align_begin ?
_struct_ref.pdbx_seq_one_letter_code AGGGTUAGGGTT
_struct_ref.pdbx_db_isoform ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 3QSC
_struct_ref_seq.pdbx_strand_id X
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 12
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession 3QSC
_struct_ref_seq.db_align_beg 1001
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 1012
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1001
_struct_ref_seq.pdbx_auth_seq_align_end 1012
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
BRU 'DNA linking' n "5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE" ? 'C9 H12 Br N2 O8 P' 387.078
CUF non-polymer .
;[2,2'-{(4,5-difluorobenzene-1,2-diyl)bis[(nitrilo-kappaN)methylylidene]}bis{5-[2-(piperidin-1-yl)ethoxy]phenolato-kappaO}(2-)]copper (II)
;
'N,N-Bis[4-[[1-(2-ethyl)piperidine]oxy]salicylidene]-4,5-difluoro-1,2-phenylenediamine-Copper (II)' 'C34 H38 Cu F2 N4 O4' 668.233
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221
DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208
HOH non-polymer . WATER ?
'H2 O' 18.015
K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098
#
_exptl.crystals_number 1
_exptl.entry_id 3QSC
_exptl.method 'X-RAY DIFFRACTION'
#
_exptl_crystal.id 1
_exptl_crystal.density_Matthews 2.61
_exptl_crystal.density_meas ?
_exptl_crystal.density_percent_sol 52.87
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.preparation ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.pH 7.0
_exptl_crystal_grow.temp 293.15
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pdbx_details
;Initial conditions were 0.6 mM quadruplex DNA, 0.6 mM ligand, 0.4% PEG 2000 (w/v), 100mM potassium chloride, 100mM sodium chloride, 100mM lithium sulphate, 20mM potassium cacodylate, equilibrated against a reservoir well solution of 60% PEG 2000 (w/v), pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293.15K
;
_exptl_crystal_grow.pdbx_pH_range ?
#
_diffrn.id 1
_diffrn.ambient_temp 105
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector CCD
_diffrn_detector.type 'ADSC QUANTUM 315r'
_diffrn_detector.pdbx_collection_date 2010-10-26
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_diffrn_protocol MAD
_diffrn_radiation.monochromator ?
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.pdbx_scattering_type x-ray
#
loop_
_diffrn_radiation_wavelength.id
_diffrn_radiation_wavelength.wavelength
_diffrn_radiation_wavelength.wt
1 0.90740 1.0
2 0.92060 1.0
3 0.92110 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source SYNCHROTRON
_diffrn_source.type 'DIAMOND BEAMLINE I03'
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list '0.90740, 0.92060, 0.92110'
_diffrn_source.pdbx_synchrotron_site Diamond
_diffrn_source.pdbx_synchrotron_beamline I03
#
_reflns.entry_id 3QSC
_reflns.d_resolution_high 2.254
_reflns.d_resolution_low 21.188
_reflns.number_all 2020
_reflns.number_obs 2020
_reflns.pdbx_netI_over_sigmaI 24.900
_reflns.pdbx_Rsym_value 0.034
_reflns.pdbx_redundancy 3.800
_reflns.percent_possible_obs 98.200
_reflns.observed_criterion_sigma_F 0
_reflns.observed_criterion_sigma_I 0
_reflns.pdbx_Rmerge_I_obs ?
_reflns.B_iso_Wilson_estimate ?
_reflns.R_free_details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_ordinal 1
_reflns.pdbx_diffrn_id 1
#
loop_
_reflns_shell.d_res_high
_reflns_shell.d_res_low
_reflns_shell.number_measured_obs
_reflns_shell.number_measured_all
_reflns_shell.number_unique_obs
_reflns_shell.Rmerge_I_obs
_reflns_shell.meanI_over_sigI_obs
_reflns_shell.pdbx_Rsym_value
_reflns_shell.pdbx_chi_squared
_reflns_shell.pdbx_redundancy
_reflns_shell.percent_possible_obs
_reflns_shell.number_unique_all
_reflns_shell.percent_possible_all
_reflns_shell.pdbx_ordinal
_reflns_shell.pdbx_diffrn_id
2.250 2.380 ? 701 ? 0.095 8.100 0.095 ? 2.600 ? 271 91.500 1 1
2.380 2.520 ? 1174 ? 0.062 11.800 0.062 ? 4.200 ? 282 99.900 2 1
2.520 2.690 ? 1080 ? 0.044 15.000 0.044 ? 4.300 ? 254 100.000 3 1
2.690 2.910 ? 1016 ? 0.039 16.200 0.039 ? 4.200 ? 243 100.000 4 1
2.910 3.190 ? 940 ? 0.031 16.200 0.031 ? 4.100 ? 227 100.000 5 1
3.190 3.560 ? 806 ? 0.032 14.300 0.032 ? 4.100 ? 199 98.800 6 1
3.560 4.120 ? 737 ? 0.028 19.800 0.028 ? 4.000 ? 185 99.800 7 1
4.120 5.040 ? 607 ? 0.036 15.800 0.036 ? 3.700 ? 162 99.600 8 1
5.040 7.130 ? 428 ? 0.030 17.300 0.030 ? 3.400 ? 127 98.800 9 1
7.130 21.876 ? 220 ? 0.031 18.500 0.031 ? 3.100 ? 70 90.200 10 1
#
_refine.entry_id 3QSC
_refine.ls_d_res_high 2.4000
_refine.ls_d_res_low 15.0000
_refine.pdbx_ls_sigma_F 0.000
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.ls_percent_reflns_obs 99.0600
_refine.ls_number_reflns_obs 1687
_refine.ls_number_reflns_all 1687
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.pdbx_R_Free_selection_details RANDOM
_refine.details ?
_refine.ls_R_factor_all ?
_refine.ls_R_factor_obs 0.2142
_refine.ls_R_factor_R_work 0.2132
_refine.ls_wR_factor_R_work 0.2426
_refine.ls_R_factor_R_free 0.2343
_refine.ls_wR_factor_R_free 0.2684
_refine.ls_percent_reflns_R_free 4.6000
_refine.ls_number_reflns_R_free 77
_refine.ls_R_factor_R_free_error ?
_refine.B_iso_mean 35.2997
_refine.solvent_model_param_bsol ?
_refine.solvent_model_param_ksol ?
_refine.pdbx_isotropic_thermal_model ?
_refine.aniso_B[1][1] -0.2500
_refine.aniso_B[2][2] 0.8400
_refine.aniso_B[3][3] -0.5800
_refine.aniso_B[1][2] 0.0000
_refine.aniso_B[1][3] 0.0000
_refine.aniso_B[2][3] 0.0000
_refine.correlation_coeff_Fo_to_Fc 0.9390
_refine.correlation_coeff_Fo_to_Fc_free 0.9130
_refine.overall_SU_R_Cruickshank_DPI 0.4643
_refine.overall_SU_R_free 0.2498
_refine.pdbx_overall_ESU_R_Free 0.2500
_refine.overall_SU_ML 0.1810
_refine.overall_SU_B 8.6280
_refine.solvent_model_details MASK
_refine.pdbx_solvent_vdw_probe_radii 1.4000
_refine.pdbx_solvent_ion_probe_radii 0.8000
_refine.pdbx_solvent_shrinkage_radii 0.8000
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.pdbx_starting_model 1K8P
_refine.pdbx_method_to_determine_struct MAD
_refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD'
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.overall_FOM_work_R_set 0.7823
_refine.B_iso_max 67.480
_refine.B_iso_min 13.140
_refine.occupancy_max 1.000
_refine.occupancy_min 0.250
_refine.pdbx_ls_sigma_I ?
_refine.ls_redundancy_reflns_obs ?
_refine.ls_R_factor_R_free_error_details ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.overall_FOM_free_R_set ?
_refine.pdbx_overall_phase_error ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 231
_refine_hist.pdbx_number_atoms_ligand 48
_refine_hist.number_atoms_solvent 27
_refine_hist.number_atoms_total 306
_refine_hist.d_res_high 2.4000
_refine_hist.d_res_low 15.0000
#
loop_
_refine_ls_restr.type
_refine_ls_restr.number
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
r_bond_refined_d 312 0.011 0.021 ? 'X-RAY DIFFRACTION' ?
r_angle_refined_deg 476 1.559 3.000 ? 'X-RAY DIFFRACTION' ?
r_chiral_restr 44 0.056 0.200 ? 'X-RAY DIFFRACTION' ?
r_gen_planes_refined 169 0.023 0.020 ? 'X-RAY DIFFRACTION' ?
r_scbond_it 312 2.847 3.000 ? 'X-RAY DIFFRACTION' ?
r_scangle_it 476 4.310 4.500 ? 'X-RAY DIFFRACTION' ?
#
_refine_ls_shell.d_res_high 2.4000
_refine_ls_shell.d_res_low 2.4610
_refine_ls_shell.pdbx_total_number_of_bins_used 20
_refine_ls_shell.percent_reflns_obs 100.0000
_refine_ls_shell.number_reflns_R_work 107
_refine_ls_shell.R_factor_all ?
_refine_ls_shell.R_factor_R_work 0.3370
_refine_ls_shell.R_factor_R_free 0.2260
_refine_ls_shell.percent_reflns_R_free ?
_refine_ls_shell.number_reflns_R_free 6
_refine_ls_shell.R_factor_R_free_error ?
_refine_ls_shell.number_reflns_all 113
_refine_ls_shell.number_reflns_obs 107
_refine_ls_shell.redundancy_reflns_obs ?
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
#
_struct.entry_id 3QSC
_struct.title
'The first crystal structure of a human telomeric G-quadruplex DNA bound to a metal-containing ligand (a copper complex)'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 3QSC
_struct_keywords.pdbx_keywords DNA
_struct_keywords.text 'Parallel, telomere, quadruplex, drug, DNA, metal complex, copper complex'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 2 ?
D N N 2 ?
E N N 3 ?
F N N 4 ?
#
_struct_biol.id 1
_struct_biol.details ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
covale1 covale both ? A DT 5 "O3'" ? ? ? 1_555 A BRU 6 P ? ? X DT 1005 X BRU 1006 1_555 ? ? ? ? ? ? ? 1.583 ? ?
covale2 covale both ? A BRU 6 "O3'" ? ? ? 1_555 A DA 7 P ? ? X BRU 1006 X DA 1007 1_555 ? ? ? ? ? ? ? 1.581 ? ?
metalc1 metalc ? ? A DG 2 O6 ? ? ? 1_555 C K . K ? ? X DG 1002 X K 2014 1_555 ? ? ? ? ? ? ? 2.872 ? ?
metalc2 metalc ? ? A DG 2 O6 ? ? ? 1_555 D K . K ? ? X DG 1002 X K 2015 1_555 ? ? ? ? ? ? ? 2.633 ? ?
metalc3 metalc ? ? A DG 3 O6 ? ? ? 1_555 B K . K ? ? X DG 1003 X K 2013 1_555 ? ? ? ? ? ? ? 2.751 ? ?
metalc4 metalc ? ? A DG 3 O6 ? ? ? 1_555 C K . K ? ? X DG 1003 X K 2014 1_555 ? ? ? ? ? ? ? 2.876 ? ?
metalc5 metalc ? ? A DG 4 O6 ? ? ? 1_555 B K . K ? ? X DG 1004 X K 2013 1_555 ? ? ? ? ? ? ? 2.802 ? ?
metalc6 metalc ? ? A DG 8 O6 ? ? ? 1_555 C K . K ? ? X DG 1008 X K 2014 1_555 ? ? ? ? ? ? ? 2.777 ? ?
metalc7 metalc ? ? A DG 8 O6 ? ? ? 1_555 D K . K ? ? X DG 1008 X K 2015 1_555 ? ? ? ? ? ? ? 2.614 ? ?
metalc8 metalc ? ? A DG 9 O6 ? ? ? 1_555 B K . K ? ? X DG 1009 X K 2013 1_555 ? ? ? ? ? ? ? 2.611 ? ?
metalc9 metalc ? ? A DG 9 O6 ? ? ? 1_555 C K . K ? ? X DG 1009 X K 2014 1_555 ? ? ? ? ? ? ? 3.043 ? ?
metalc10 metalc ? ? A DG 10 O6 ? ? ? 1_555 B K . K ? ? X DG 1010 X K 2013 1_555 ? ? ? ? ? ? ? 2.705 ? ?
hydrog1 hydrog ? ? A DG 2 N1 ? ? ? 1_555 A DG 8 O6 ? ? X DG 1002 X DG 1008 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ?
hydrog2 hydrog ? ? A DG 2 N2 ? ? ? 1_555 A DG 8 N7 ? ? X DG 1002 X DG 1008 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ?
hydrog3 hydrog ? ? A DG 3 N1 ? ? ? 1_555 A DG 9 O6 ? ? X DG 1003 X DG 1009 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ?
hydrog4 hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DG 9 N7 ? ? X DG 1003 X DG 1009 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ?
hydrog5 hydrog ? ? A DG 4 N1 ? ? ? 1_555 A DG 10 O6 ? ? X DG 1004 X DG 1010 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ?
hydrog6 hydrog ? ? A DG 4 N2 ? ? ? 1_555 A DG 10 N7 ? ? X DG 1004 X DG 1010 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
covale ? ?
metalc ? ?
hydrog ? ?
#
loop_
_struct_site.id
_struct_site.pdbx_evidence_code
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_struct_site.pdbx_auth_ins_code
_struct_site.pdbx_num_residues
_struct_site.details
AC1 Software X K 2013 ? 10 'BINDING SITE FOR RESIDUE K X 2013'
AC2 Software X K 2014 ? 14 'BINDING SITE FOR RESIDUE K X 2014'
AC3 Software X K 2015 ? 12 'BINDING SITE FOR RESIDUE K X 2015'
AC4 Software X CUF 3016 ? 7 'BINDING SITE FOR RESIDUE CUF X 3016'
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 10 DG A 3 ? DG X 1003 . ? 1_555 ?
2 AC1 10 DG A 3 ? DG X 1003 . ? 2_665 ?
3 AC1 10 DG A 4 ? DG X 1004 . ? 1_555 ?
4 AC1 10 DG A 4 ? DG X 1004 . ? 2_665 ?
5 AC1 10 DG A 9 ? DG X 1009 . ? 1_555 ?
6 AC1 10 DG A 9 ? DG X 1009 . ? 2_665 ?
7 AC1 10 DG A 10 ? DG X 1010 . ? 2_665 ?
8 AC1 10 DG A 10 ? DG X 1010 . ? 1_555 ?
9 AC1 10 K C . ? K X 2014 . ? 2_665 ?
10 AC1 10 K C . ? K X 2014 . ? 1_555 ?
11 AC2 14 DG A 2 ? DG X 1002 . ? 1_555 ?
12 AC2 14 DG A 2 ? DG X 1002 . ? 2_665 ?
13 AC2 14 DG A 3 ? DG X 1003 . ? 2_665 ?
14 AC2 14 DG A 3 ? DG X 1003 . ? 1_555 ?
15 AC2 14 DG A 8 ? DG X 1008 . ? 1_555 ?
16 AC2 14 DG A 8 ? DG X 1008 . ? 2_665 ?
17 AC2 14 DG A 9 ? DG X 1009 . ? 1_555 ?
18 AC2 14 DG A 9 ? DG X 1009 . ? 2_665 ?
19 AC2 14 K B . ? K X 2013 . ? 2_665 ?
20 AC2 14 K B . ? K X 2013 . ? 1_555 ?
21 AC2 14 K D . ? K X 2015 . ? 2_665 ?
22 AC2 14 K D . ? K X 2015 . ? 3_656 ?
23 AC2 14 K D . ? K X 2015 . ? 4_566 ?
24 AC2 14 K D . ? K X 2015 . ? 1_555 ?
25 AC3 12 DG A 2 ? DG X 1002 . ? 1_555 ?
26 AC3 12 DG A 2 ? DG X 1002 . ? 2_665 ?
27 AC3 12 DG A 2 ? DG X 1002 . ? 3_656 ?
28 AC3 12 DG A 2 ? DG X 1002 . ? 4_566 ?
29 AC3 12 DG A 8 ? DG X 1008 . ? 3_656 ?
30 AC3 12 DG A 8 ? DG X 1008 . ? 4_566 ?
31 AC3 12 DG A 8 ? DG X 1008 . ? 1_555 ?
32 AC3 12 DG A 8 ? DG X 1008 . ? 2_665 ?
33 AC3 12 K C . ? K X 2014 . ? 3_656 ?
34 AC3 12 K C . ? K X 2014 . ? 2_665 ?
35 AC3 12 K C . ? K X 2014 . ? 4_566 ?
36 AC3 12 K C . ? K X 2014 . ? 1_555 ?
37 AC4 7 DG A 4 ? DG X 1004 . ? 1_555 ?
38 AC4 7 DG A 4 ? DG X 1004 . ? 2_665 ?
39 AC4 7 DG A 10 ? DG X 1010 . ? 2_665 ?
40 AC4 7 DG A 10 ? DG X 1010 . ? 1_555 ?
41 AC4 7 DT A 11 ? DT X 1011 . ? 1_555 ?
42 AC4 7 DT A 11 ? DT X 1011 . ? 4_565 ?
43 AC4 7 DT A 11 ? DT X 1011 . ? 2_665 ?
#
_atom_sites.entry_id 3QSC
_atom_sites.fract_transf_matrix[1][1] 0.022856
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.018253
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.029913
_atom_sites.fract_transf_vector[1] 0.000000
_atom_sites.fract_transf_vector[2] 0.000000
_atom_sites.fract_transf_vector[3] 0.000000
#
loop_
_atom_type.symbol
BR
C
CU
F
K
N
O
P
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 O "O5'" . DA A 1 1 ? 29.793 23.541 12.244 1.00 41.50 ? 1001 DA X "O5'" 1
ATOM 2 C "C5'" . DA A 1 1 ? 30.955 23.764 11.421 1.00 43.89 ? 1001 DA X "C5'" 1
ATOM 3 C "C4'" . DA A 1 1 ? 32.216 23.799 12.270 1.00 43.83 ? 1001 DA X "C4'" 1
ATOM 4 O "O4'" . DA A 1 1 ? 32.488 25.149 12.651 1.00 45.94 ? 1001 DA X "O4'" 1
ATOM 5 C "C3'" . DA A 1 1 ? 32.108 23.069 13.600 1.00 44.26 ? 1001 DA X "C3'" 1
ATOM 6 O "O3'" . DA A 1 1 ? 32.537 21.733 13.443 1.00 40.66 ? 1001 DA X "O3'" 1
ATOM 7 C "C2'" . DA A 1 1 ? 33.003 23.875 14.562 1.00 44.45 ? 1001 DA X "C2'" 1
ATOM 8 C "C1'" . DA A 1 1 ? 33.350 25.126 13.763 1.00 45.79 ? 1001 DA X "C1'" 1
ATOM 9 N N9 . DA A 1 1 ? 33.231 26.421 14.457 1.00 48.13 ? 1001 DA X N9 1
ATOM 10 C C8 . DA A 1 1 ? 34.258 27.272 14.802 1.00 49.95 ? 1001 DA X C8 1
ATOM 11 N N7 . DA A 1 1 ? 33.869 28.423 15.312 1.00 47.68 ? 1001 DA X N7 1
ATOM 12 C C5 . DA A 1 1 ? 32.501 28.355 15.234 1.00 48.34 ? 1001 DA X C5 1
ATOM 13 C C6 . DA A 1 1 ? 31.512 29.254 15.614 1.00 46.98 ? 1001 DA X C6 1
ATOM 14 N N6 . DA A 1 1 ? 31.764 30.430 16.155 1.00 49.53 ? 1001 DA X N6 1
ATOM 15 N N1 . DA A 1 1 ? 30.254 28.889 15.433 1.00 49.42 ? 1001 DA X N1 1
ATOM 16 C C2 . DA A 1 1 ? 29.998 27.675 14.905 1.00 50.31 ? 1001 DA X C2 1
ATOM 17 N N3 . DA A 1 1 ? 30.836 26.730 14.507 1.00 46.56 ? 1001 DA X N3 1
ATOM 18 C C4 . DA A 1 1 ? 32.086 27.131 14.709 1.00 48.26 ? 1001 DA X C4 1
ATOM 19 P P . DG A 1 2 ? 32.179 20.646 14.542 1.00 39.43 ? 1002 DG X P 1
ATOM 20 O OP1 . DG A 1 2 ? 32.846 21.035 15.793 1.00 38.14 ? 1002 DG X OP1 1
ATOM 21 O OP2 . DG A 1 2 ? 32.401 19.322 13.948 1.00 39.99 ? 1002 DG X OP2 1
ATOM 22 O "O5'" . DG A 1 2 ? 30.623 20.828 14.779 1.00 37.09 ? 1002 DG X "O5'" 1
ATOM 23 C "C5'" . DG A 1 2 ? 29.717 20.457 13.797 1.00 29.28 ? 1002 DG X "C5'" 1
ATOM 24 C "C4'" . DG A 1 2 ? 28.482 19.860 14.434 1.00 26.08 ? 1002 DG X "C4'" 1
ATOM 25 O "O4'" . DG A 1 2 ? 28.025 20.645 15.582 1.00 23.13 ? 1002 DG X "O4'" 1
ATOM 26 C "C3'" . DG A 1 2 ? 27.308 19.776 13.493 1.00 26.03 ? 1002 DG X "C3'" 1
ATOM 27 O "O3'" . DG A 1 2 ? 27.442 18.568 12.745 1.00 26.88 ? 1002 DG X "O3'" 1
ATOM 28 C "C2'" . DG A 1 2 ? 26.139 19.742 14.479 1.00 24.32 ? 1002 DG X "C2'" 1
ATOM 29 C "C1'" . DG A 1 2 ? 26.613 20.662 15.608 1.00 17.78 ? 1002 DG X "C1'" 1
ATOM 30 N N9 . DG A 1 2 ? 26.180 22.056 15.472 1.00 19.59 ? 1002 DG X N9 1
ATOM 31 C C8 . DG A 1 2 ? 26.980 23.178 15.435 1.00 18.75 ? 1002 DG X C8 1
ATOM 32 N N7 . DG A 1 2 ? 26.314 24.295 15.305 1.00 17.27 ? 1002 DG X N7 1
ATOM 33 C C5 . DG A 1 2 ? 25.001 23.890 15.286 1.00 15.60 ? 1002 DG X C5 1
ATOM 34 C C6 . DG A 1 2 ? 23.821 24.659 15.194 1.00 20.40 ? 1002 DG X C6 1
ATOM 35 O O6 . DG A 1 2 ? 23.696 25.890 15.116 1.00 25.36 ? 1002 DG X O6 1
ATOM 36 N N1 . DG A 1 2 ? 22.679 23.877 15.186 1.00 22.06 ? 1002 DG X N1 1
ATOM 37 C C2 . DG A 1 2 ? 22.669 22.512 15.291 1.00 22.20 ? 1002 DG X C2 1
ATOM 38 N N2 . DG A 1 2 ? 21.461 21.941 15.320 1.00 24.44 ? 1002 DG X N2 1
ATOM 39 N N3 . DG A 1 2 ? 23.774 21.767 15.398 1.00 23.74 ? 1002 DG X N3 1
ATOM 40 C C4 . DG A 1 2 ? 24.899 22.525 15.390 1.00 16.83 ? 1002 DG X C4 1
ATOM 41 P P . DG A 1 3 ? 26.907 18.386 11.247 1.00 27.06 ? 1003 DG X P 1
ATOM 42 O OP1 . DG A 1 3 ? 27.394 17.067 10.823 1.00 31.21 ? 1003 DG X OP1 1
ATOM 43 O OP2 . DG A 1 3 ? 27.156 19.559 10.376 1.00 25.71 ? 1003 DG X OP2 1
ATOM 44 O "O5'" . DG A 1 3 ? 25.356 18.321 11.476 1.00 28.91 ? 1003 DG X "O5'" 1
ATOM 45 C "C5'" . DG A 1 3 ? 24.754 17.284 12.195 1.00 30.16 ? 1003 DG X "C5'" 1
ATOM 46 C "C4'" . DG A 1 3 ? 23.257 17.448 12.057 1.00 26.13 ? 1003 DG X "C4'" 1
ATOM 47 O "O4'" . DG A 1 3 ? 22.903 18.577 12.874 1.00 22.83 ? 1003 DG X "O4'" 1
ATOM 48 C "C3'" . DG A 1 3 ? 22.806 17.816 10.639 1.00 25.49 ? 1003 DG X "C3'" 1
ATOM 49 O "O3'" . DG A 1 3 ? 22.431 16.653 9.961 1.00 30.22 ? 1003 DG X "O3'" 1
ATOM 50 C "C2'" . DG A 1 3 ? 21.601 18.704 10.884 1.00 26.50 ? 1003 DG X "C2'" 1
ATOM 51 C "C1'" . DG A 1 3 ? 21.943 19.367 12.220 1.00 22.32 ? 1003 DG X "C1'" 1
ATOM 52 N N9 . DG A 1 3 ? 22.427 20.742 12.106 1.00 19.33 ? 1003 DG X N9 1
ATOM 53 C C8 . DG A 1 3 ? 23.713 21.220 12.245 1.00 18.71 ? 1003 DG X C8 1
ATOM 54 N N7 . DG A 1 3 ? 23.805 22.513 12.067 1.00 16.29 ? 1003 DG X N7 1
ATOM 55 C C5 . DG A 1 3 ? 22.478 22.906 11.846 1.00 15.98 ? 1003 DG X C5 1
ATOM 56 C C6 . DG A 1 3 ? 21.917 24.179 11.618 1.00 17.62 ? 1003 DG X C6 1
ATOM 57 O O6 . DG A 1 3 ? 22.479 25.289 11.599 1.00 25.26 ? 1003 DG X O6 1
ATOM 58 N N1 . DG A 1 3 ? 20.548 24.115 11.405 1.00 21.82 ? 1003 DG X N1 1
ATOM 59 C C2 . DG A 1 3 ? 19.805 22.961 11.441 1.00 22.26 ? 1003 DG X C2 1
ATOM 60 N N2 . DG A 1 3 ? 18.500 23.077 11.223 1.00 20.62 ? 1003 DG X N2 1
ATOM 61 N N3 . DG A 1 3 ? 20.314 21.775 11.643 1.00 21.91 ? 1003 DG X N3 1
ATOM 62 C C4 . DG A 1 3 ? 21.645 21.824 11.854 1.00 17.46 ? 1003 DG X C4 1
ATOM 63 P P . DG A 1 4 ? 22.118 16.662 8.401 1.00 35.66 ? 1004 DG X P 1
ATOM 64 O OP1 . DG A 1 4 ? 21.904 15.254 7.990 1.00 36.97 ? 1004 DG X OP1 1
ATOM 65 O OP2 . DG A 1 4 ? 23.126 17.493 7.703 1.00 34.14 ? 1004 DG X OP2 1
ATOM 66 O "O5'" . DG A 1 4 ? 20.737 17.434 8.344 1.00 33.47 ? 1004 DG X "O5'" 1
ATOM 67 C "C5'" . DG A 1 4 ? 19.559 16.817 8.770 1.00 31.37 ? 1004 DG X "C5'" 1
ATOM 68 C "C4'" . DG A 1 4 ? 18.384 17.580 8.207 1.00 30.75 ? 1004 DG X "C4'" 1
ATOM 69 O "O4'" . DG A 1 4 ? 18.489 18.980 8.615 1.00 31.33 ? 1004 DG X "O4'" 1
ATOM 70 C "C3'" . DG A 1 4 ? 18.331 17.603 6.681 1.00 30.62 ? 1004 DG X "C3'" 1
ATOM 71 O "O3'" . DG A 1 4 ? 16.987 17.766 6.242 1.00 33.99 ? 1004 DG X "O3'" 1
ATOM 72 C "C2'" . DG A 1 4 ? 19.154 18.853 6.356 1.00 28.69 ? 1004 DG X "C2'" 1
ATOM 73 C "C1'" . DG A 1 4 ? 18.680 19.804 7.452 1.00 29.99 ? 1004 DG X "C1'" 1
ATOM 74 N N9 . DG A 1 4 ? 19.620 20.913 7.752 1.00 26.28 ? 1004 DG X N9 1
ATOM 75 C C8 . DG A 1 4 ? 20.992 20.822 7.907 1.00 25.47 ? 1004 DG X C8 1
ATOM 76 N N7 . DG A 1 4 ? 21.573 21.960 8.149 1.00 23.08 ? 1004 DG X N7 1
ATOM 77 C C5 . DG A 1 4 ? 20.528 22.869 8.167 1.00 24.06 ? 1004 DG X C5 1
ATOM 78 C C6 . DG A 1 4 ? 20.567 24.247 8.362 1.00 25.51 ? 1004 DG X C6 1
ATOM 79 O O6 . DG A 1 4 ? 21.554 24.943 8.664 1.00 30.98 ? 1004 DG X O6 1
ATOM 80 N N1 . DG A 1 4 ? 19.313 24.818 8.237 1.00 22.72 ? 1004 DG X N1 1
ATOM 81 C C2 . DG A 1 4 ? 18.165 24.127 7.994 1.00 20.48 ? 1004 DG X C2 1
ATOM 82 N N2 . DG A 1 4 ? 17.058 24.855 7.951 1.00 26.50 ? 1004 DG X N2 1
ATOM 83 N N3 . DG A 1 4 ? 18.100 22.830 7.797 1.00 19.52 ? 1004 DG X N3 1
ATOM 84 C C4 . DG A 1 4 ? 19.319 22.256 7.924 1.00 23.81 ? 1004 DG X C4 1
ATOM 85 P P . DT A 1 5 ? 16.107 16.533 5.709 1.00 36.75 ? 1005 DT X P 1
ATOM 86 O OP1 . DT A 1 5 ? 16.942 15.714 4.809 1.00 35.72 ? 1005 DT X OP1 1
ATOM 87 O OP2 . DT A 1 5 ? 14.825 17.108 5.251 1.00 31.37 ? 1005 DT X OP2 1
ATOM 88 O "O5'" . DT A 1 5 ? 15.824 15.674 7.029 1.00 34.92 ? 1005 DT X "O5'" 1
ATOM 89 C "C5'" . DT A 1 5 ? 14.744 16.036 7.857 1.00 36.37 ? 1005 DT X "C5'" 1
ATOM 90 C "C4'" . DT A 1 5 ? 14.129 14.823 8.512 1.00 36.53 ? 1005 DT X "C4'" 1
ATOM 91 O "O4'" . DT A 1 5 ? 13.109 14.283 7.655 1.00 39.93 ? 1005 DT X "O4'" 1
ATOM 92 C "C3'" . DT A 1 5 ? 15.077 13.670 8.801 1.00 35.76 ? 1005 DT X "C3'" 1
ATOM 93 O "O3'" . DT A 1 5 ? 14.594 13.012 9.927 1.00 34.38 ? 1005 DT X "O3'" 1
ATOM 94 C "C2'" . DT A 1 5 ? 14.915 12.804 7.567 1.00 37.96 ? 1005 DT X "C2'" 1
ATOM 95 C "C1'" . DT A 1 5 ? 13.425 12.949 7.318 1.00 43.53 ? 1005 DT X "C1'" 1
ATOM 96 N N1 . DT A 1 5 ? 13.021 12.741 5.904 1.00 53.68 ? 1005 DT X N1 1
ATOM 97 C C2 . DT A 1 5 ? 12.517 11.513 5.461 1.00 57.93 ? 1005 DT X C2 1
ATOM 98 O O2 . DT A 1 5 ? 12.406 10.511 6.148 1.00 57.35 ? 1005 DT X O2 1
ATOM 99 N N3 . DT A 1 5 ? 12.173 11.494 4.138 1.00 63.21 ? 1005 DT X N3 1
ATOM 100 C C4 . DT A 1 5 ? 12.267 12.540 3.226 1.00 65.50 ? 1005 DT X C4 1
ATOM 101 O O4 . DT A 1 5 ? 11.929 12.428 2.046 1.00 67.48 ? 1005 DT X O4 1
ATOM 102 C C5 . DT A 1 5 ? 12.772 13.779 3.759 1.00 64.92 ? 1005 DT X C5 1
ATOM 103 C C7 . DT A 1 5 ? 12.909 14.980 2.864 1.00 67.10 ? 1005 DT X C7 1
ATOM 104 C C6 . DT A 1 5 ? 13.112 13.818 5.055 1.00 59.77 ? 1005 DT X C6 1
HETATM 105 N N1 . BRU A 1 6 ? 11.183 11.665 13.371 1.00 32.92 ? 1006 BRU X N1 1
HETATM 106 C C2 . BRU A 1 6 ? 9.989 11.196 13.791 1.00 33.81 ? 1006 BRU X C2 1
HETATM 107 N N3 . BRU A 1 6 ? 9.095 10.712 12.913 1.00 33.03 ? 1006 BRU X N3 1
HETATM 108 C C4 . BRU A 1 6 ? 9.391 10.668 11.600 1.00 34.19 ? 1006 BRU X C4 1
HETATM 109 C C5 . BRU A 1 6 ? 10.647 11.148 11.152 1.00 34.01 ? 1006 BRU X C5 1
HETATM 110 C C6 . BRU A 1 6 ? 11.531 11.631 12.045 1.00 30.92 ? 1006 BRU X C6 1
HETATM 111 O O2 . BRU A 1 6 ? 9.710 11.223 14.991 1.00 30.22 ? 1006 BRU X O2 1
HETATM 112 O O4 . BRU A 1 6 ? 8.577 10.232 10.794 1.00 31.67 ? 1006 BRU X O4 1
HETATM 113 BR BR . BRU A 1 6 ? 11.032 11.117 9.312 1.00 37.24 ? 1006 BRU X BR 1
HETATM 114 C "C1'" . BRU A 1 6 ? 12.133 12.129 14.388 1.00 32.24 ? 1006 BRU X "C1'" 1
HETATM 115 C "C2'" . BRU A 1 6 ? 13.332 11.174 14.507 1.00 29.72 ? 1006 BRU X "C2'" 1
HETATM 116 C "C3'" . BRU A 1 6 ? 14.357 12.094 15.164 1.00 29.76 ? 1006 BRU X "C3'" 1
HETATM 117 C "C4'" . BRU A 1 6 ? 14.119 13.391 14.378 1.00 31.09 ? 1006 BRU X "C4'" 1
HETATM 118 O "O3'" . BRU A 1 6 ? 13.989 12.322 16.516 1.00 28.88 ? 1006 BRU X "O3'" 1
HETATM 119 O "O4'" . BRU A 1 6 ? 12.690 13.421 14.060 1.00 33.28 ? 1006 BRU X "O4'" 1
HETATM 120 C "C5'" . BRU A 1 6 ? 14.948 13.407 13.096 1.00 31.37 ? 1006 BRU X "C5'" 1
HETATM 121 O "O5'" . BRU A 1 6 ? 14.579 12.301 12.278 1.00 32.43 ? 1006 BRU X "O5'" 1
HETATM 122 P P . BRU A 1 6 ? 15.545 12.340 11.000 1.00 33.22 ? 1006 BRU X P 1
HETATM 123 O OP1 . BRU A 1 6 ? 16.880 12.859 11.385 1.00 37.88 ? 1006 BRU X OP1 1
HETATM 124 O OP2 . BRU A 1 6 ? 15.727 10.846 10.476 1.00 36.16 ? 1006 BRU X OP2 1
ATOM 125 P P . DA A 1 7 ? 15.073 12.354 17.666 1.00 26.50 ? 1007 DA X P 1
ATOM 126 O OP1 . DA A 1 7 ? 16.102 11.348 17.353 1.00 27.42 ? 1007 DA X OP1 1
ATOM 127 O OP2 . DA A 1 7 ? 14.365 12.346 18.950 1.00 29.98 ? 1007 DA X OP2 1
ATOM 128 O "O5'" . DA A 1 7 ? 15.737 13.788 17.478 1.00 31.32 ? 1007 DA X "O5'" 1
ATOM 129 C "C5'" . DA A 1 7 ? 15.181 14.975 18.009 1.00 24.41 ? 1007 DA X "C5'" 1
ATOM 130 C "C4'" . DA A 1 7 ? 16.017 16.151 17.528 1.00 21.16 ? 1007 DA X "C4'" 1
ATOM 131 O "O4'" . DA A 1 7 ? 17.361 15.975 18.018 1.00 21.60 ? 1007 DA X "O4'" 1
ATOM 132 C "C3'" . DA A 1 7 ? 16.172 16.291 16.019 1.00 18.32 ? 1007 DA X "C3'" 1
ATOM 133 O "O3'" . DA A 1 7 ? 16.423 17.622 15.724 1.00 21.30 ? 1007 DA X "O3'" 1
ATOM 134 C "C2'" . DA A 1 7 ? 17.404 15.460 15.749 1.00 19.33 ? 1007 DA X "C2'" 1
ATOM 135 C "C1'" . DA A 1 7 ? 18.254 15.807 16.958 1.00 19.05 ? 1007 DA X "C1'" 1
ATOM 136 N N9 . DA A 1 7 ? 19.186 14.769 17.341 1.00 22.74 ? 1007 DA X N9 1
ATOM 137 C C8 . DA A 1 7 ? 19.035 13.422 17.174 1.00 28.13 ? 1007 DA X C8 1
ATOM 138 N N7 . DA A 1 7 ? 20.048 12.718 17.619 1.00 28.47 ? 1007 DA X N7 1
ATOM 139 C C5 . DA A 1 7 ? 20.919 13.671 18.111 1.00 28.62 ? 1007 DA X C5 1
ATOM 140 C C6 . DA A 1 7 ? 22.185 13.577 18.723 1.00 29.69 ? 1007 DA X C6 1
ATOM 141 N N6 . DA A 1 7 ? 22.814 12.424 18.955 1.00 28.30 ? 1007 DA X N6 1
ATOM 142 N N1 . DA A 1 7 ? 22.781 14.721 19.093 1.00 30.52 ? 1007 DA X N1 1
ATOM 143 C C2 . DA A 1 7 ? 22.149 15.874 18.881 1.00 29.70 ? 1007 DA X C2 1
ATOM 144 N N3 . DA A 1 7 ? 20.961 16.087 18.323 1.00 31.63 ? 1007 DA X N3 1
ATOM 145 C C4 . DA A 1 7 ? 20.386 14.934 17.972 1.00 26.40 ? 1007 DA X C4 1
ATOM 146 P P . DG A 1 8 ? 16.308 18.157 14.239 1.00 24.85 ? 1008 DG X P 1
ATOM 147 O OP1 . DG A 1 8 ? 15.359 17.303 13.530 1.00 28.80 ? 1008 DG X OP1 1
ATOM 148 O OP2 . DG A 1 8 ? 17.647 18.371 13.674 1.00 24.48 ? 1008 DG X OP2 1
ATOM 149 O "O5'" . DG A 1 8 ? 15.682 19.596 14.473 1.00 25.95 ? 1008 DG X "O5'" 1
ATOM 150 C "C5'" . DG A 1 8 ? 14.377 19.747 14.977 1.00 23.09 ? 1008 DG X "C5'" 1
ATOM 151 C "C4'" . DG A 1 8 ? 13.818 21.074 14.509 1.00 19.29 ? 1008 DG X "C4'" 1
ATOM 152 O "O4'" . DG A 1 8 ? 14.651 22.138 15.043 1.00 22.68 ? 1008 DG X "O4'" 1
ATOM 153 C "C3'" . DG A 1 8 ? 13.853 21.254 13.007 1.00 20.31 ? 1008 DG X "C3'" 1
ATOM 154 O "O3'" . DG A 1 8 ? 12.747 22.027 12.566 1.00 25.14 ? 1008 DG X "O3'" 1
ATOM 155 C "C2'" . DG A 1 8 ? 15.156 22.003 12.809 1.00 18.03 ? 1008 DG X "C2'" 1
ATOM 156 C "C1'" . DG A 1 8 ? 15.202 22.902 14.008 1.00 15.94 ? 1008 DG X "C1'" 1
ATOM 157 N N9 . DG A 1 8 ? 16.581 23.258 14.319 1.00 15.78 ? 1008 DG X N9 1
ATOM 158 C C8 . DG A 1 8 ? 17.691 22.432 14.251 1.00 19.38 ? 1008 DG X C8 1
ATOM 159 N N7 . DG A 1 8 ? 18.834 23.050 14.449 1.00 16.34 ? 1008 DG X N7 1
ATOM 160 C C5 . DG A 1 8 ? 18.451 24.372 14.641 1.00 15.05 ? 1008 DG X C5 1
ATOM 161 C C6 . DG A 1 8 ? 19.225 25.510 14.883 1.00 14.68 ? 1008 DG X C6 1
ATOM 162 O O6 . DG A 1 8 ? 20.459 25.603 15.010 1.00 17.86 ? 1008 DG X O6 1
ATOM 163 N N1 . DG A 1 8 ? 18.453 26.659 14.979 1.00 15.00 ? 1008 DG X N1 1
ATOM 164 C C2 . DG A 1 8 ? 17.097 26.713 14.886 1.00 16.45 ? 1008 DG X C2 1
ATOM 165 N N2 . DG A 1 8 ? 16.532 27.926 15.035 1.00 17.02 ? 1008 DG X N2 1
ATOM 166 N N3 . DG A 1 8 ? 16.349 25.657 14.627 1.00 19.64 ? 1008 DG X N3 1
ATOM 167 C C4 . DG A 1 8 ? 17.081 24.516 14.546 1.00 17.65 ? 1008 DG X C4 1
ATOM 168 P P . DG A 1 9 ? 12.461 22.226 11.012 1.00 26.93 ? 1009 DG X P 1
ATOM 169 O OP1 . DG A 1 9 ? 11.130 21.691 10.722 1.00 31.05 ? 1009 DG X OP1 1
ATOM 170 O OP2 . DG A 1 9 ? 13.636 21.737 10.261 1.00 24.40 ? 1009 DG X OP2 1
ATOM 171 O "O5'" . DG A 1 9 ? 12.377 23.796 10.878 1.00 27.50 ? 1009 DG X "O5'" 1
ATOM 172 C "C5'" . DG A 1 9 ? 11.622 24.543 11.813 1.00 31.18 ? 1009 DG X "C5'" 1
ATOM 173 C "C4'" . DG A 1 9 ? 11.858 26.031 11.611 1.00 33.26 ? 1009 DG X "C4'" 1
ATOM 174 O "O4'" . DG A 1 9 ? 13.074 26.375 12.288 1.00 30.64 ? 1009 DG X "O4'" 1
ATOM 175 C "C3'" . DG A 1 9 ? 12.051 26.443 10.154 1.00 34.56 ? 1009 DG X "C3'" 1
ATOM 176 O "O3'" . DG A 1 9 ? 10.946 27.147 9.693 1.00 42.78 ? 1009 DG X "O3'" 1
ATOM 177 C "C2'" . DG A 1 9 ? 13.226 27.385 10.146 1.00 30.80 ? 1009 DG X "C2'" 1
ATOM 178 C "C1'" . DG A 1 9 ? 13.800 27.308 11.532 1.00 29.47 ? 1009 DG X "C1'" 1
ATOM 179 N N9 . DG A 1 9 ? 15.177 26.890 11.474 1.00 26.31 ? 1009 DG X N9 1
ATOM 180 C C8 . DG A 1 9 ? 15.651 25.625 11.262 1.00 22.24 ? 1009 DG X C8 1
ATOM 181 N N7 . DG A 1 9 ? 16.956 25.580 11.226 1.00 26.16 ? 1009 DG X N7 1
ATOM 182 C C5 . DG A 1 9 ? 17.352 26.903 11.435 1.00 21.84 ? 1009 DG X C5 1
ATOM 183 C C6 . DG A 1 9 ? 18.636 27.478 11.487 1.00 22.50 ? 1009 DG X C6 1
ATOM 184 O O6 . DG A 1 9 ? 19.733 26.917 11.381 1.00 27.39 ? 1009 DG X O6 1
ATOM 185 N N1 . DG A 1 9 ? 18.581 28.862 11.681 1.00 21.84 ? 1009 DG X N1 1
ATOM 186 C C2 . DG A 1 9 ? 17.417 29.599 11.778 1.00 16.72 ? 1009 DG X C2 1
ATOM 187 N N2 . DG A 1 9 ? 17.550 30.921 11.963 1.00 13.14 ? 1009 DG X N2 1
ATOM 188 N N3 . DG A 1 9 ? 16.220 29.062 11.751 1.00 17.23 ? 1009 DG X N3 1
ATOM 189 C C4 . DG A 1 9 ? 16.265 27.720 11.555 1.00 21.04 ? 1009 DG X C4 1
ATOM 190 P P . DG A 1 10 ? 10.674 27.222 8.111 1.00 50.03 ? 1010 DG X P 1
ATOM 191 O OP1 . DG A 1 10 ? 9.211 27.439 7.962 1.00 54.75 ? 1010 DG X OP1 1
ATOM 192 O OP2 . DG A 1 10 ? 11.359 26.059 7.478 1.00 43.68 ? 1010 DG X OP2 1
ATOM 193 O "O5'" . DG A 1 10 ? 11.411 28.543 7.602 1.00 44.73 ? 1010 DG X "O5'" 1
ATOM 194 C "C5'" . DG A 1 10 ? 11.036 29.804 8.117 1.00 43.82 ? 1010 DG X "C5'" 1
ATOM 195 C "C4'" . DG A 1 10 ? 12.123 30.802 7.780 1.00 41.77 ? 1010 DG X "C4'" 1
ATOM 196 O "O4'" . DG A 1 10 ? 13.357 30.405 8.462 1.00 39.78 ? 1010 DG X "O4'" 1
ATOM 197 C "C3'" . DG A 1 10 ? 12.448 30.897 6.280 1.00 39.18 ? 1010 DG X "C3'" 1
ATOM 198 O "O3'" . DG A 1 10 ? 12.314 32.244 5.799 1.00 43.53 ? 1010 DG X "O3'" 1
ATOM 199 C "C2'" . DG A 1 10 ? 13.890 30.434 6.184 1.00 36.81 ? 1010 DG X "C2'" 1
ATOM 200 C "C1'" . DG A 1 10 ? 14.441 30.648 7.599 1.00 34.26 ? 1010 DG X "C1'" 1
ATOM 201 N N9 . DG A 1 10 ? 15.537 29.728 7.883 1.00 25.66 ? 1010 DG X N9 1
ATOM 202 C C8 . DG A 1 10 ? 15.501 28.353 7.800 1.00 24.06 ? 1010 DG X C8 1
ATOM 203 N N7 . DG A 1 10 ? 16.671 27.781 7.931 1.00 24.21 ? 1010 DG X N7 1
ATOM 204 C C5 . DG A 1 10 ? 17.534 28.845 8.105 1.00 20.29 ? 1010 DG X C5 1
ATOM 205 C C6 . DG A 1 10 ? 18.906 28.835 8.333 1.00 20.79 ? 1010 DG X C6 1
ATOM 206 O O6 . DG A 1 10 ? 19.637 27.851 8.488 1.00 23.47 ? 1010 DG X O6 1
ATOM 207 N N1 . DG A 1 10 ? 19.426 30.125 8.438 1.00 22.33 ? 1010 DG X N1 1
ATOM 208 C C2 . DG A 1 10 ? 18.667 31.277 8.386 1.00 21.75 ? 1010 DG X C2 1
ATOM 209 N N2 . DG A 1 10 ? 19.325 32.421 8.523 1.00 22.93 ? 1010 DG X N2 1
ATOM 210 N N3 . DG A 1 10 ? 17.354 31.298 8.184 1.00 23.54 ? 1010 DG X N3 1
ATOM 211 C C4 . DG A 1 10 ? 16.859 30.049 8.042 1.00 22.66 ? 1010 DG X C4 1
ATOM 212 P P . DT A 1 11 ? 12.193 32.563 4.228 0.50 42.75 ? 1011 DT X P 1
ATOM 213 O OP1 . DT A 1 11 ? 11.485 33.853 4.114 0.50 41.00 ? 1011 DT X OP1 1
ATOM 214 O OP2 . DT A 1 11 ? 11.682 31.358 3.538 0.50 41.94 ? 1011 DT X OP2 1
ATOM 215 O "O5'" . DT A 1 11 ? 13.702 32.762 3.750 0.50 44.86 ? 1011 DT X "O5'" 1
ATOM 216 C "C5'" . DT A 1 11 ? 14.256 31.857 2.793 0.50 48.99 ? 1011 DT X "C5'" 1
ATOM 217 C "C4'" . DT A 1 11 ? 15.239 32.563 1.870 0.50 51.68 ? 1011 DT X "C4'" 1
ATOM 218 O "O4'" . DT A 1 11 ? 16.594 32.289 2.283 0.50 52.64 ? 1011 DT X "O4'" 1
ATOM 219 C "C3'" . DT A 1 11 ? 15.197 32.110 0.410 0.50 52.97 ? 1011 DT X "C3'" 1
ATOM 220 O "O3'" . DT A 1 11 ? 14.343 32.970 -0.353 0.50 53.15 ? 1011 DT X "O3'" 1
ATOM 221 C "C2'" . DT A 1 11 ? 16.667 32.185 -0.063 0.50 52.73 ? 1011 DT X "C2'" 1
ATOM 222 C "C1'" . DT A 1 11 ? 17.433 32.607 1.195 0.50 52.53 ? 1011 DT X "C1'" 1
ATOM 223 N N1 . DT A 1 11 ? 18.789 31.938 1.366 0.50 51.79 ? 1011 DT X N1 1
ATOM 224 C C2 . DT A 1 11 ? 18.889 30.556 1.346 0.50 51.38 ? 1011 DT X C2 1
ATOM 225 O O2 . DT A 1 11 ? 17.929 29.812 1.214 0.50 51.13 ? 1011 DT X O2 1
ATOM 226 N N3 . DT A 1 11 ? 20.171 30.072 1.496 0.50 50.35 ? 1011 DT X N3 1
ATOM 227 C C4 . DT A 1 11 ? 21.339 30.810 1.657 0.50 49.00 ? 1011 DT X C4 1
ATOM 228 O O4 . DT A 1 11 ? 22.445 30.282 1.786 0.50 46.91 ? 1011 DT X O4 1
ATOM 229 C C5 . DT A 1 11 ? 21.166 32.242 1.659 0.50 49.13 ? 1011 DT X C5 1
ATOM 230 C C7 . DT A 1 11 ? 22.361 33.141 1.820 0.50 49.36 ? 1011 DT X C7 1
ATOM 231 C C6 . DT A 1 11 ? 19.919 32.731 1.512 0.50 50.64 ? 1011 DT X C6 1
HETATM 232 K K . K B 2 . ? 21.865 27.409 9.957 0.50 23.70 ? 2013 K X K 1
HETATM 233 K K . K C 2 . ? 21.900 27.402 13.462 0.50 25.67 ? 2014 K X K 1
HETATM 234 K K . K D 2 . ? 21.876 27.392 16.284 0.25 26.94 ? 2015 K X K 1
HETATM 235 C C1 . CUF E 3 . ? 19.683 24.529 4.502 0.50 44.63 ? 3016 CUF X C1 1
HETATM 236 F F1 . CUF E 3 . ? 27.543 27.876 4.920 0.50 39.44 ? 3016 CUF X F1 1
HETATM 237 N N1 . CUF E 3 . ? 22.501 25.623 5.057 0.50 40.52 ? 3016 CUF X N1 1
HETATM 238 O O1 . CUF E 3 . ? 19.574 25.827 4.905 0.50 41.73 ? 3016 CUF X O1 1
HETATM 239 CU CU1 . CUF E 3 . ? 21.135 27.050 5.166 0.50 42.92 ? 3016 CUF X CU1 1
HETATM 240 C C2 . CUF E 3 . ? 18.515 23.815 4.255 0.50 46.83 ? 3016 CUF X C2 1
HETATM 241 F F2 . CUF E 3 . ? 27.252 25.144 4.658 0.50 41.02 ? 3016 CUF X F2 1
HETATM 242 N N2 . CUF E 3 . ? 22.734 28.238 5.330 0.50 40.48 ? 3016 CUF X N2 1
HETATM 243 O O2 . CUF E 3 . ? 19.809 28.551 5.204 0.50 39.86 ? 3016 CUF X O2 1
HETATM 244 C C3 . CUF E 3 . ? 18.570 22.468 3.911 0.50 48.83 ? 3016 CUF X C3 1
HETATM 245 N N3 . CUF E 3 . ? 15.803 19.342 1.613 0.50 61.39 ? 3016 CUF X N3 1
HETATM 246 O O3 . CUF E 3 . ? 17.423 21.780 3.656 0.50 52.96 ? 3016 CUF X O3 1
HETATM 247 C C4 . CUF E 3 . ? 19.786 21.805 3.804 0.50 47.72 ? 3016 CUF X C4 1
HETATM 248 N N4 . CUF E 3 . ? 16.567 35.895 5.906 0.50 61.00 ? 3016 CUF X N4 1
HETATM 249 O O4 . CUF E 3 . ? 18.315 33.061 5.057 0.50 46.55 ? 3016 CUF X O4 1
HETATM 250 C C5 . CUF E 3 . ? 20.979 22.468 4.053 0.50 46.66 ? 3016 CUF X C5 1
HETATM 251 C C6 . CUF E 3 . ? 20.985 23.813 4.411 0.50 45.02 ? 3016 CUF X C6 1
HETATM 252 C C7 . CUF E 3 . ? 22.303 24.457 4.631 0.50 42.59 ? 3016 CUF X C7 1
HETATM 253 C C8 . CUF E 3 . ? 23.805 26.135 5.111 0.50 40.07 ? 3016 CUF X C8 1
HETATM 254 C C9 . CUF E 3 . ? 24.911 25.344 4.877 0.50 40.54 ? 3016 CUF X C9 1
HETATM 255 C C10 . CUF E 3 . ? 26.171 25.928 4.831 0.50 40.68 ? 3016 CUF X C10 1
HETATM 256 C C11 . CUF E 3 . ? 26.312 27.312 4.968 0.50 40.24 ? 3016 CUF X C11 1
HETATM 257 C C12 . CUF E 3 . ? 25.179 28.114 5.149 0.50 39.47 ? 3016 CUF X C12 1
HETATM 258 C C13 . CUF E 3 . ? 23.934 27.511 5.239 0.50 39.77 ? 3016 CUF X C13 1
HETATM 259 C C14 . CUF E 3 . ? 22.740 29.497 5.211 0.50 38.51 ? 3016 CUF X C14 1
HETATM 260 C C15 . CUF E 3 . ? 21.542 30.379 5.183 0.50 39.81 ? 3016 CUF X C15 1
HETATM 261 C C16 . CUF E 3 . ? 21.748 31.757 5.156 0.50 41.44 ? 3016 CUF X C16 1
HETATM 262 C C17 . CUF E 3 . ? 20.673 32.644 5.120 0.50 42.75 ? 3016 CUF X C17 1
HETATM 263 C C18 . CUF E 3 . ? 19.362 32.173 5.102 0.50 43.99 ? 3016 CUF X C18 1
HETATM 264 C C19 . CUF E 3 . ? 19.103 30.806 5.124 0.50 41.79 ? 3016 CUF X C19 1
HETATM 265 C C20 . CUF E 3 . ? 20.140 29.880 5.163 0.50 40.11 ? 3016 CUF X C20 1
HETATM 266 C C21 . CUF E 3 . ? 17.498 20.583 2.876 0.50 56.39 ? 3016 CUF X C21 1
HETATM 267 C C22 . CUF E 3 . ? 16.483 20.645 1.735 0.50 59.19 ? 3016 CUF X C22 1
HETATM 268 C C23 . CUF E 3 . ? 16.709 18.375 0.957 0.50 61.37 ? 3016 CUF X C23 1
HETATM 269 C C24 . CUF E 3 . ? 16.032 17.011 0.865 0.50 61.32 ? 3016 CUF X C24 1
HETATM 270 C C25 . CUF E 3 . ? 14.746 17.138 0.073 0.50 62.14 ? 3016 CUF X C25 1
HETATM 271 C C26 . CUF E 3 . ? 13.844 18.188 0.686 0.50 62.19 ? 3016 CUF X C26 1
HETATM 272 C C27 . CUF E 3 . ? 14.569 19.509 0.812 0.50 62.24 ? 3016 CUF X C27 1
HETATM 273 C C28 . CUF E 3 . ? 18.333 34.230 5.872 0.50 52.20 ? 3016 CUF X C28 1
HETATM 274 C C29 . CUF E 3 . ? 16.912 34.529 6.353 0.50 56.50 ? 3016 CUF X C29 1
HETATM 275 C C30 . CUF E 3 . ? 17.090 36.105 4.537 0.50 63.08 ? 3016 CUF X C30 1
HETATM 276 C C31 . CUF E 3 . ? 16.828 37.557 4.076 0.50 64.91 ? 3016 CUF X C31 1
HETATM 277 C C32 . CUF E 3 . ? 15.331 37.888 4.125 0.50 65.64 ? 3016 CUF X C32 1
HETATM 278 C C33 . CUF E 3 . ? 14.750 37.516 5.503 0.50 64.77 ? 3016 CUF X C33 1
HETATM 279 C C34 . CUF E 3 . ? 15.101 36.061 5.906 0.50 62.07 ? 3016 CUF X C34 1
HETATM 280 O O . HOH F 4 . ? 23.338 18.890 16.431 1.00 16.90 ? 1 HOH X O 1
HETATM 281 O O . HOH F 4 . ? 19.141 16.360 12.932 1.00 23.20 ? 2 HOH X O 1
HETATM 282 O O . HOH F 4 . ? 16.200 21.251 9.883 1.00 25.38 ? 3 HOH X O 1
HETATM 283 O O . HOH F 4 . ? 13.902 9.542 11.481 1.00 47.49 ? 4 HOH X O 1
HETATM 284 O O . HOH F 4 . ? 17.572 10.167 15.196 1.00 36.08 ? 5 HOH X O 1
HETATM 285 O O . HOH F 4 . ? 10.229 19.361 12.550 1.00 39.84 ? 6 HOH X O 1
HETATM 286 O O . HOH F 4 . ? 23.718 12.967 10.903 1.00 44.91 ? 7 HOH X O 1
HETATM 287 O O . HOH F 4 . ? 33.244 19.729 18.137 1.00 40.63 ? 8 HOH X O 1
HETATM 288 O O . HOH F 4 . ? 14.235 8.843 8.373 1.00 54.43 ? 9 HOH X O 1
HETATM 289 O O . HOH F 4 . ? 33.734 22.515 18.075 1.00 53.78 ? 10 HOH X O 1
HETATM 290 O O . HOH F 4 . ? 9.100 22.023 8.605 1.00 52.86 ? 11 HOH X O 1
HETATM 291 O O . HOH F 4 . ? 21.295 10.133 18.479 1.00 41.43 ? 12 HOH X O 1
HETATM 292 O O . HOH F 4 . ? 30.071 15.946 11.858 1.00 46.02 ? 13 HOH X O 1
HETATM 293 O O . HOH F 4 . ? 25.379 13.496 12.258 1.00 34.86 ? 14 HOH X O 1
HETATM 294 O O . HOH F 4 . ? 21.400 13.460 10.501 1.00 50.16 ? 15 HOH X O 1
HETATM 295 O O . HOH F 4 . ? 16.048 17.699 10.918 1.00 32.70 ? 16 HOH X O 1
HETATM 296 O O . HOH F 4 . ? 12.750 19.222 7.809 1.00 40.72 ? 17 HOH X O 1
HETATM 297 O O . HOH F 4 . ? 17.775 19.835 11.359 1.00 30.21 ? 18 HOH X O 1
HETATM 298 O O . HOH F 4 . ? 18.284 38.662 6.660 1.00 49.24 ? 19 HOH X O 1
HETATM 299 O O . HOH F 4 . ? 23.897 18.708 18.926 1.00 46.33 ? 20 HOH X O 1
HETATM 300 O O . HOH F 4 . ? 18.076 15.521 11.180 1.00 31.36 ? 21 HOH X O 1
HETATM 301 O O . HOH F 4 . ? 7.579 25.313 12.235 1.00 39.41 ? 22 HOH X O 1
HETATM 302 O O . HOH F 4 . ? 21.676 6.511 18.822 1.00 54.96 ? 23 HOH X O 1
HETATM 303 O O . HOH F 4 . ? 22.385 8.808 22.288 1.00 58.61 ? 24 HOH X O 1
HETATM 304 O O . HOH F 4 . ? 9.521 10.764 17.512 1.00 39.66 ? 25 HOH X O 1
HETATM 305 O O . HOH F 4 . ? 10.974 13.044 18.639 0.50 20.27 ? 26 HOH X O 1
HETATM 306 O O . HOH F 4 . ? 23.160 27.810 1.615 0.50 51.42 ? 27 HOH X O 1
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 DA 1 1001 1001 DA A X . n
A 1 2 DG 2 1002 1002 DG G X . n
A 1 3 DG 3 1003 1003 DG G X . n
A 1 4 DG 4 1004 1004 DG G X . n
A 1 5 DT 5 1005 1005 DT T X . n
A 1 6 BRU 6 1006 1006 BRU BRU X . n
A 1 7 DA 7 1007 1007 DA A X . n
A 1 8 DG 8 1008 1008 DG G X . n
A 1 9 DG 9 1009 1009 DG G X . n
A 1 10 DG 10 1010 1010 DG G X . n
A 1 11 DT 11 1011 1011 DT T X . n
A 1 12 DT 12 1012 ? ? ? X . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 K 1 2013 2013 K K X .
C 2 K 1 2014 2014 K K X .
D 2 K 1 2015 2015 K K X .
E 3 CUF 1 3016 3016 CUF CUF X .
F 4 HOH 1 1 1 HOH HOH X .
F 4 HOH 2 2 2 HOH HOH X .
F 4 HOH 3 3 3 HOH HOH X .
F 4 HOH 4 4 4 HOH HOH X .
F 4 HOH 5 5 5 HOH HOH X .
F 4 HOH 6 6 6 HOH HOH X .
F 4 HOH 7 7 7 HOH HOH X .
F 4 HOH 8 8 8 HOH HOH X .
F 4 HOH 9 9 9 HOH HOH X .
F 4 HOH 10 10 10 HOH HOH X .
F 4 HOH 11 11 11 HOH HOH X .
F 4 HOH 12 12 12 HOH HOH X .
F 4 HOH 13 13 13 HOH HOH X .
F 4 HOH 14 14 14 HOH HOH X .
F 4 HOH 15 15 15 HOH HOH X .
F 4 HOH 16 16 16 HOH HOH X .
F 4 HOH 17 17 17 HOH HOH X .
F 4 HOH 18 18 18 HOH HOH X .
F 4 HOH 19 19 19 HOH HOH X .
F 4 HOH 20 20 20 HOH HOH X .
F 4 HOH 21 21 21 HOH HOH X .
F 4 HOH 22 22 22 HOH HOH X .
F 4 HOH 23 23 23 HOH HOH X .
F 4 HOH 24 24 24 HOH HOH X .
F 4 HOH 25 25 25 HOH HOH X .
F 4 HOH 26 26 26 HOH HOH X .
F 4 HOH 27 27 27 HOH HOH X .
#
_pdbx_struct_mod_residue.id 1
_pdbx_struct_mod_residue.label_asym_id A
_pdbx_struct_mod_residue.label_comp_id BRU
_pdbx_struct_mod_residue.label_seq_id 6
_pdbx_struct_mod_residue.auth_asym_id X
_pdbx_struct_mod_residue.auth_comp_id BRU
_pdbx_struct_mod_residue.auth_seq_id 1006
_pdbx_struct_mod_residue.PDB_ins_code ?
_pdbx_struct_mod_residue.parent_comp_id DU
_pdbx_struct_mod_residue.details ?
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_and_software_defined_assembly
_pdbx_struct_assembly.method_details PISA
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1,2
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F
#
loop_
_pdbx_struct_assembly_prop.biol_id
_pdbx_struct_assembly_prop.type
_pdbx_struct_assembly_prop.value
_pdbx_struct_assembly_prop.details
1 'ABSA (A^2)' 2240 ?
1 MORE 3 ?
1 'SSA (A^2)' 4850 ?
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1.0000000000 0.0000000000 0.0000000000 43.7530000000 0.0000000000 -1.0000000000
0.0000000000 54.7860000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
#
loop_
_pdbx_struct_special_symmetry.id
_pdbx_struct_special_symmetry.PDB_model_num
_pdbx_struct_special_symmetry.auth_asym_id
_pdbx_struct_special_symmetry.auth_comp_id
_pdbx_struct_special_symmetry.auth_seq_id
_pdbx_struct_special_symmetry.PDB_ins_code
_pdbx_struct_special_symmetry.label_asym_id
_pdbx_struct_special_symmetry.label_comp_id
_pdbx_struct_special_symmetry.label_seq_id
1 1 X K 2013 ? B K .
2 1 X K 2014 ? C K .
3 1 X K 2015 ? D K .
#
loop_
_pdbx_struct_conn_angle.id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_alt_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_auth_atom_id
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_alt_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr2_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_atom_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code
_pdbx_struct_conn_angle.ptnr2_symmetry
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_alt_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_atom_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_pdbx_struct_conn_angle.value_esd
1 O6 ? A DG 2 ? X DG 1002 ? 1_555 K ? C K . ? X K 2014 ? 1_555 O6 ? A DG 3 ? X DG 1003 ? 1_555 82.0 ?
2 O6 ? A DG 2 ? X DG 1002 ? 1_555 K ? C K . ? X K 2014 ? 1_555 O6 ? A DG 8 ? X DG 1008 ? 1_555 70.3 ?
3 O6 ? A DG 3 ? X DG 1003 ? 1_555 K ? C K . ? X K 2014 ? 1_555 O6 ? A DG 8 ? X DG 1008 ? 1_555 89.4 ?
4 O6 ? A DG 2 ? X DG 1002 ? 1_555 K ? C K . ? X K 2014 ? 1_555 O6 ? A DG 9 ? X DG 1009 ? 1_555 139.0 ?
5 O6 ? A DG 3 ? X DG 1003 ? 1_555 K ? C K . ? X K 2014 ? 1_555 O6 ? A DG 9 ? X DG 1009 ? 1_555 65.4 ?
6 O6 ? A DG 8 ? X DG 1008 ? 1_555 K ? C K . ? X K 2014 ? 1_555 O6 ? A DG 9 ? X DG 1009 ? 1_555 84.7 ?
7 O6 ? A DG 2 ? X DG 1002 ? 1_555 K ? D K . ? X K 2015 ? 1_555 O6 ? A DG 8 ? X DG 1008 ? 1_555 76.6 ?
8 O6 ? A DG 3 ? X DG 1003 ? 1_555 K ? B K . ? X K 2013 ? 1_555 O6 ? A DG 4 ? X DG 1004 ? 1_555 67.8 ?
9 O6 ? A DG 3 ? X DG 1003 ? 1_555 K ? B K . ? X K 2013 ? 1_555 O6 ? A DG 9 ? X DG 1009 ? 1_555 73.2 ?
10 O6 ? A DG 4 ? X DG 1004 ? 1_555 K ? B K . ? X K 2013 ? 1_555 O6 ? A DG 9 ? X DG 1009 ? 1_555 89.7 ?
11 O6 ? A DG 3 ? X DG 1003 ? 1_555 K ? B K . ? X K 2013 ? 1_555 O6 ? A DG 10 ? X DG 1010 ? 1_555 129.3 ?
12 O6 ? A DG 4 ? X DG 1004 ? 1_555 K ? B K . ? X K 2013 ? 1_555 O6 ? A DG 10 ? X DG 1010 ? 1_555 78.6 ?
13 O6 ? A DG 9 ? X DG 1009 ? 1_555 K ? B K . ? X K 2013 ? 1_555 O6 ? A DG 10 ? X DG 1010 ? 1_555 69.8 ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2011-12-07
2 'Structure model' 1 1 2012-04-18
3 'Structure model' 1 2 2023-09-13
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Database references'
2 3 'Structure model' 'Data collection'
3 3 'Structure model' 'Database references'
4 3 'Structure model' 'Derived calculations'
5 3 'Structure model' 'Refinement description'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 3 'Structure model' chem_comp_atom
2 3 'Structure model' chem_comp_bond
3 3 'Structure model' database_2
4 3 'Structure model' pdbx_initial_refinement_model
5 3 'Structure model' pdbx_struct_conn_angle
6 3 'Structure model' struct_conn
7 3 'Structure model' struct_site
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 3 'Structure model' '_database_2.pdbx_DOI'
2 3 'Structure model' '_database_2.pdbx_database_accession'
3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id'
4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id'
5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id'
6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id'
7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id'
8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id'
9 3 'Structure model' '_pdbx_struct_conn_angle.value'
10 3 'Structure model' '_struct_conn.pdbx_dist_value'
11 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
12 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id'
13 3 'Structure model' '_struct_conn.ptnr1_label_seq_id'
14 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id'
15 3 'Structure model' '_struct_conn.ptnr2_label_asym_id'
16 3 'Structure model' '_struct_site.pdbx_auth_asym_id'
17 3 'Structure model' '_struct_site.pdbx_auth_comp_id'
18 3 'Structure model' '_struct_site.pdbx_auth_seq_id'
#
_diffrn_reflns.diffrn_id 1
_diffrn_reflns.pdbx_d_res_high 2.352
_diffrn_reflns.pdbx_d_res_low 23.805
_diffrn_reflns.pdbx_number_obs 1774
_diffrn_reflns.pdbx_Rmerge_I_obs ?
_diffrn_reflns.pdbx_Rsym_value 0.101
_diffrn_reflns.pdbx_chi_squared ?
_diffrn_reflns.av_sigmaI_over_netI 3.40
_diffrn_reflns.pdbx_redundancy 3.60
_diffrn_reflns.pdbx_percent_possible_obs 99.30
_diffrn_reflns.number 6416
_diffrn_reflns.pdbx_observed_criterion ?
_diffrn_reflns.limit_h_max ?
_diffrn_reflns.limit_h_min ?
_diffrn_reflns.limit_k_max ?
_diffrn_reflns.limit_k_min ?
_diffrn_reflns.limit_l_max ?
_diffrn_reflns.limit_l_min ?
#
loop_
_pdbx_diffrn_reflns_shell.diffrn_id
_pdbx_diffrn_reflns_shell.d_res_high
_pdbx_diffrn_reflns_shell.d_res_low
_pdbx_diffrn_reflns_shell.number_obs
_pdbx_diffrn_reflns_shell.rejects
_pdbx_diffrn_reflns_shell.Rmerge_I_obs
_pdbx_diffrn_reflns_shell.Rsym_value
_pdbx_diffrn_reflns_shell.chi_squared
_pdbx_diffrn_reflns_shell.redundancy
_pdbx_diffrn_reflns_shell.percent_possible_obs
1 7.44 23.81 ? ? 0.030 0.030 ? 3.10 96.60
1 5.26 7.44 ? ? 0.051 0.051 ? 3.10 98.40
1 4.29 5.26 ? ? 0.061 0.061 ? 3.50 98.10
1 3.72 4.29 ? ? 0.074 0.074 ? 3.60 98.60
1 3.33 3.72 ? ? 0.107 0.107 ? 3.70 99.10
1 3.04 3.33 ? ? 0.177 0.177 ? 3.70 99.40
1 2.81 3.04 ? ? 0.214 0.214 ? 3.80 100.00
1 2.63 2.81 ? ? 0.273 0.273 ? 3.80 99.80
1 2.48 2.63 ? ? 0.356 0.356 ? 3.80 99.80
1 2.35 2.48 ? ? 0.418 0.418 ? 3.60 99.80
#
_phasing.method MAD
#
loop_
_software.pdbx_ordinal
_software.name
_software.version
_software.date
_software.type
_software.contact_author
_software.contact_author_email
_software.classification
_software.location
_software.language
_software.citation_id
1 MOSFLM . ? package 'Andrew G.W. Leslie' andrew@mrc-lmb.cam.ac.uk 'data reduction'
http://www.mrc-lmb.cam.ac.uk/harry/mosflm/ ? ?
2 SCALA 3.3.16 2010/01/06 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling'
http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ?
3 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing
http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ?
4 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement
http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ?
5 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction'
http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ?
6 ADSC Quantum ? ? ? ? 'data collection' ? ? ?
7 SHELXD . ? ? ? ? phasing ? ? ?
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 "O4'" X DG 1004 ? ? "C1'" X DG 1004 ? ? N9 X DG 1004 ? ? 110.41 108.30 2.11 0.30 N
2 1 "O3'" X DT 1005 ? ? P X BRU 1006 ? ? OP1 X BRU 1006 ? ? 124.61 110.50 14.11 1.10 Y
3 1 "O4'" X DG 1008 ? ? "C1'" X DG 1008 ? ? N9 X DG 1008 ? ? 110.36 108.30 2.06 0.30 N
4 1 "O4'" X DG 1010 ? ? "C1'" X DG 1010 ? ? N9 X DG 1010 ? ? 110.52 108.30 2.22 0.30 N
5 1 "O4'" X DT 1011 ? ? "C1'" X DT 1011 ? ? N1 X DT 1011 ? ? 110.14 108.30 1.84 0.30 N
#
_pdbx_unobs_or_zero_occ_residues.id 1
_pdbx_unobs_or_zero_occ_residues.PDB_model_num 1
_pdbx_unobs_or_zero_occ_residues.polymer_flag Y
_pdbx_unobs_or_zero_occ_residues.occupancy_flag 1
_pdbx_unobs_or_zero_occ_residues.auth_asym_id X
_pdbx_unobs_or_zero_occ_residues.auth_comp_id DT
_pdbx_unobs_or_zero_occ_residues.auth_seq_id 1012
_pdbx_unobs_or_zero_occ_residues.PDB_ins_code ?
_pdbx_unobs_or_zero_occ_residues.label_asym_id A
_pdbx_unobs_or_zero_occ_residues.label_comp_id DT
_pdbx_unobs_or_zero_occ_residues.label_seq_id 12
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
BRU N1 N N N 1
BRU C2 C N N 2
BRU N3 N N N 3
BRU C4 C N N 4
BRU C5 C N N 5
BRU C6 C N N 6
BRU O2 O N N 7
BRU O4 O N N 8
BRU BR BR N N 9
BRU "C1'" C N R 10
BRU "C2'" C N N 11
BRU "C3'" C N S 12
BRU "C4'" C N R 13
BRU "O3'" O N N 14
BRU "O4'" O N N 15
BRU "C5'" C N N 16
BRU "O5'" O N N 17
BRU P P N N 18
BRU OP1 O N N 19
BRU OP2 O N N 20
BRU OP3 O N N 21
BRU HN3 H N N 22
BRU H6 H N N 23
BRU "H1'" H N N 24
BRU "H2'" H N N 25
BRU "H2''" H N N 26
BRU "H3'" H N N 27
BRU "H4'" H N N 28
BRU "HO3'" H N N 29
BRU "H5'" H N N 30
BRU "H5''" H N N 31
BRU HOP2 H N N 32
BRU HOP3 H N N 33
CUF C1 C Y N 34
CUF F1 F N N 35
CUF N1 N N N 36
CUF O1 O N N 37
CUF CU1 CU N N 38
CUF C2 C Y N 39
CUF F2 F N N 40
CUF N2 N N N 41
CUF O2 O N N 42
CUF C3 C Y N 43
CUF N3 N N N 44
CUF O3 O N N 45
CUF C4 C Y N 46
CUF N4 N N N 47
CUF O4 O N N 48
CUF C5 C Y N 49
CUF C6 C Y N 50
CUF C7 C N N 51
CUF C8 C Y N 52
CUF C9 C Y N 53
CUF C10 C Y N 54
CUF C11 C Y N 55
CUF C12 C Y N 56
CUF C13 C Y N 57
CUF C14 C N N 58
CUF C15 C Y N 59
CUF C16 C Y N 60
CUF C17 C Y N 61
CUF C18 C Y N 62
CUF C19 C Y N 63
CUF C20 C Y N 64
CUF C21 C N N 65
CUF C22 C N N 66
CUF C23 C N N 67
CUF C24 C N N 68
CUF C25 C N N 69
CUF C26 C N N 70
CUF C27 C N N 71
CUF C28 C N N 72
CUF C29 C N N 73
CUF C30 C N N 74
CUF C31 C N N 75
CUF C32 C N N 76
CUF C33 C N N 77
CUF C34 C N N 78
CUF H1 H N N 79
CUF H2 H N N 80
CUF H3 H N N 81
CUF H4 H N N 82
CUF H5 H N N 83
CUF H6 H N N 84
CUF H7 H N N 85
CUF H8 H N N 86
CUF H9 H N N 87
CUF H10 H N N 88
CUF H11 H N N 89
CUF H12 H N N 90
CUF H13 H N N 91
CUF H14 H N N 92
CUF H15 H N N 93
CUF H16 H N N 94
CUF H17 H N N 95
CUF H18 H N N 96
CUF H19 H N N 97
CUF H20 H N N 98
CUF H21 H N N 99
CUF H22 H N N 100
CUF H23 H N N 101
CUF H24 H N N 102
CUF H25 H N N 103
CUF H26 H N N 104
CUF H27 H N N 105
CUF H28 H N N 106
CUF H29 H N N 107
CUF H30 H N N 108
CUF H31 H N N 109
CUF H32 H N N 110
CUF H33 H N N 111
CUF H34 H N N 112
CUF H35 H N N 113
CUF H36 H N N 114
CUF H37 H N N 115
CUF H38 H N N 116
DA OP3 O N N 117
DA P P N N 118
DA OP1 O N N 119
DA OP2 O N N 120
DA "O5'" O N N 121
DA "C5'" C N N 122
DA "C4'" C N R 123
DA "O4'" O N N 124
DA "C3'" C N S 125
DA "O3'" O N N 126
DA "C2'" C N N 127
DA "C1'" C N R 128
DA N9 N Y N 129
DA C8 C Y N 130
DA N7 N Y N 131
DA C5 C Y N 132
DA C6 C Y N 133
DA N6 N N N 134
DA N1 N Y N 135
DA C2 C Y N 136
DA N3 N Y N 137
DA C4 C Y N 138
DA HOP3 H N N 139
DA HOP2 H N N 140
DA "H5'" H N N 141
DA "H5''" H N N 142
DA "H4'" H N N 143
DA "H3'" H N N 144
DA "HO3'" H N N 145
DA "H2'" H N N 146
DA "H2''" H N N 147
DA "H1'" H N N 148
DA H8 H N N 149
DA H61 H N N 150
DA H62 H N N 151
DA H2 H N N 152
DG OP3 O N N 153
DG P P N N 154
DG OP1 O N N 155
DG OP2 O N N 156
DG "O5'" O N N 157
DG "C5'" C N N 158
DG "C4'" C N R 159
DG "O4'" O N N 160
DG "C3'" C N S 161
DG "O3'" O N N 162
DG "C2'" C N N 163
DG "C1'" C N R 164
DG N9 N Y N 165
DG C8 C Y N 166
DG N7 N Y N 167
DG C5 C Y N 168
DG C6 C N N 169
DG O6 O N N 170
DG N1 N N N 171
DG C2 C N N 172
DG N2 N N N 173
DG N3 N N N 174
DG C4 C Y N 175
DG HOP3 H N N 176
DG HOP2 H N N 177
DG "H5'" H N N 178
DG "H5''" H N N 179
DG "H4'" H N N 180
DG "H3'" H N N 181
DG "HO3'" H N N 182
DG "H2'" H N N 183
DG "H2''" H N N 184
DG "H1'" H N N 185
DG H8 H N N 186
DG H1 H N N 187
DG H21 H N N 188
DG H22 H N N 189
DT OP3 O N N 190
DT P P N N 191
DT OP1 O N N 192
DT OP2 O N N 193
DT "O5'" O N N 194
DT "C5'" C N N 195
DT "C4'" C N R 196
DT "O4'" O N N 197
DT "C3'" C N S 198
DT "O3'" O N N 199
DT "C2'" C N N 200
DT "C1'" C N R 201
DT N1 N N N 202
DT C2 C N N 203
DT O2 O N N 204
DT N3 N N N 205
DT C4 C N N 206
DT O4 O N N 207
DT C5 C N N 208
DT C7 C N N 209
DT C6 C N N 210
DT HOP3 H N N 211
DT HOP2 H N N 212
DT "H5'" H N N 213
DT "H5''" H N N 214
DT "H4'" H N N 215
DT "H3'" H N N 216
DT "HO3'" H N N 217
DT "H2'" H N N 218
DT "H2''" H N N 219
DT "H1'" H N N 220
DT H3 H N N 221
DT H71 H N N 222
DT H72 H N N 223
DT H73 H N N 224
DT H6 H N N 225
HOH O O N N 226
HOH H1 H N N 227
HOH H2 H N N 228
K K K N N 229
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
BRU N1 C2 sing N N 1
BRU N1 C6 sing N N 2
BRU N1 "C1'" sing N N 3
BRU C2 N3 sing N N 4
BRU C2 O2 doub N N 5
BRU N3 C4 sing N N 6
BRU N3 HN3 sing N N 7
BRU C4 C5 sing N N 8
BRU C4 O4 doub N N 9
BRU C5 C6 doub N N 10
BRU C5 BR sing N N 11
BRU C6 H6 sing N N 12
BRU "C1'" "C2'" sing N N 13
BRU "C1'" "O4'" sing N N 14
BRU "C1'" "H1'" sing N N 15
BRU "C2'" "C3'" sing N N 16
BRU "C2'" "H2'" sing N N 17
BRU "C2'" "H2''" sing N N 18
BRU "C3'" "C4'" sing N N 19
BRU "C3'" "O3'" sing N N 20
BRU "C3'" "H3'" sing N N 21
BRU "C4'" "O4'" sing N N 22
BRU "C4'" "C5'" sing N N 23
BRU "C4'" "H4'" sing N N 24
BRU "O3'" "HO3'" sing N N 25
BRU "C5'" "O5'" sing N N 26
BRU "C5'" "H5'" sing N N 27
BRU "C5'" "H5''" sing N N 28
BRU "O5'" P sing N N 29
BRU P OP1 doub N N 30
BRU P OP2 sing N N 31
BRU P OP3 sing N N 32
BRU OP2 HOP2 sing N N 33
BRU OP3 HOP3 sing N N 34
CUF C1 O1 sing N N 35
CUF C1 C2 doub Y N 36
CUF C1 C6 sing Y N 37
CUF F1 C11 sing N N 38
CUF N1 C7 doub N N 39
CUF N1 C8 sing N N 40
CUF C2 C3 sing Y N 41
CUF C2 H1 sing N N 42
CUF F2 C10 sing N N 43
CUF N2 C13 sing N N 44
CUF N2 C14 doub N N 45
CUF O2 C20 sing N N 46
CUF C3 O3 sing N N 47
CUF C3 C4 doub Y N 48
CUF N3 C22 sing N N 49
CUF N3 C23 sing N N 50
CUF N3 C27 sing N N 51
CUF O3 C21 sing N N 52
CUF C4 C5 sing Y N 53
CUF C4 H2 sing N N 54
CUF N4 C29 sing N N 55
CUF N4 C30 sing N N 56
CUF N4 C34 sing N N 57
CUF O4 C18 sing N N 58
CUF O4 C28 sing N N 59
CUF C5 C6 doub Y N 60
CUF C5 H3 sing N N 61
CUF C6 C7 sing N N 62
CUF C7 H4 sing N N 63
CUF C8 C9 doub Y N 64
CUF C8 C13 sing Y N 65
CUF C9 C10 sing Y N 66
CUF C9 H5 sing N N 67
CUF C10 C11 doub Y N 68
CUF C11 C12 sing Y N 69
CUF C12 C13 doub Y N 70
CUF C12 H6 sing N N 71
CUF C14 C15 sing N N 72
CUF C14 H7 sing N N 73
CUF C15 C16 doub Y N 74
CUF C15 C20 sing Y N 75
CUF C16 C17 sing Y N 76
CUF C16 H8 sing N N 77
CUF C17 C18 doub Y N 78
CUF C17 H9 sing N N 79
CUF C18 C19 sing Y N 80
CUF C19 C20 doub Y N 81
CUF C19 H10 sing N N 82
CUF C21 C22 sing N N 83
CUF C21 H11 sing N N 84
CUF C21 H12 sing N N 85
CUF C22 H13 sing N N 86
CUF C22 H14 sing N N 87
CUF C23 C24 sing N N 88
CUF C23 H15 sing N N 89
CUF C23 H16 sing N N 90
CUF C24 C25 sing N N 91
CUF C24 H17 sing N N 92
CUF C24 H18 sing N N 93
CUF C25 C26 sing N N 94
CUF C25 H19 sing N N 95
CUF C25 H20 sing N N 96
CUF C26 C27 sing N N 97
CUF C26 H21 sing N N 98
CUF C26 H22 sing N N 99
CUF C27 H23 sing N N 100
CUF C27 H24 sing N N 101
CUF C28 C29 sing N N 102
CUF C28 H25 sing N N 103
CUF C28 H26 sing N N 104
CUF C29 H27 sing N N 105
CUF C29 H28 sing N N 106
CUF C30 C31 sing N N 107
CUF C30 H29 sing N N 108
CUF C30 H30 sing N N 109
CUF C31 C32 sing N N 110
CUF C31 H31 sing N N 111
CUF C31 H32 sing N N 112
CUF C32 C33 sing N N 113
CUF C32 H33 sing N N 114
CUF C32 H34 sing N N 115
CUF C33 C34 sing N N 116
CUF C33 H35 sing N N 117
CUF C33 H36 sing N N 118
CUF C34 H37 sing N N 119
CUF C34 H38 sing N N 120
CUF O2 CU1 sing N N 121
CUF O1 CU1 sing N N 122
CUF N1 CU1 sing N N 123
CUF N2 CU1 sing N N 124
DA OP3 P sing N N 125
DA OP3 HOP3 sing N N 126
DA P OP1 doub N N 127
DA P OP2 sing N N 128
DA P "O5'" sing N N 129
DA OP2 HOP2 sing N N 130
DA "O5'" "C5'" sing N N 131
DA "C5'" "C4'" sing N N 132
DA "C5'" "H5'" sing N N 133
DA "C5'" "H5''" sing N N 134
DA "C4'" "O4'" sing N N 135
DA "C4'" "C3'" sing N N 136
DA "C4'" "H4'" sing N N 137
DA "O4'" "C1'" sing N N 138
DA "C3'" "O3'" sing N N 139
DA "C3'" "C2'" sing N N 140
DA "C3'" "H3'" sing N N 141
DA "O3'" "HO3'" sing N N 142
DA "C2'" "C1'" sing N N 143
DA "C2'" "H2'" sing N N 144
DA "C2'" "H2''" sing N N 145
DA "C1'" N9 sing N N 146
DA "C1'" "H1'" sing N N 147
DA N9 C8 sing Y N 148
DA N9 C4 sing Y N 149
DA C8 N7 doub Y N 150
DA C8 H8 sing N N 151
DA N7 C5 sing Y N 152
DA C5 C6 sing Y N 153
DA C5 C4 doub Y N 154
DA C6 N6 sing N N 155
DA C6 N1 doub Y N 156
DA N6 H61 sing N N 157
DA N6 H62 sing N N 158
DA N1 C2 sing Y N 159
DA C2 N3 doub Y N 160
DA C2 H2 sing N N 161
DA N3 C4 sing Y N 162
DG OP3 P sing N N 163
DG OP3 HOP3 sing N N 164
DG P OP1 doub N N 165
DG P OP2 sing N N 166
DG P "O5'" sing N N 167
DG OP2 HOP2 sing N N 168
DG "O5'" "C5'" sing N N 169
DG "C5'" "C4'" sing N N 170
DG "C5'" "H5'" sing N N 171
DG "C5'" "H5''" sing N N 172
DG "C4'" "O4'" sing N N 173
DG "C4'" "C3'" sing N N 174
DG "C4'" "H4'" sing N N 175
DG "O4'" "C1'" sing N N 176
DG "C3'" "O3'" sing N N 177
DG "C3'" "C2'" sing N N 178
DG "C3'" "H3'" sing N N 179
DG "O3'" "HO3'" sing N N 180
DG "C2'" "C1'" sing N N 181
DG "C2'" "H2'" sing N N 182
DG "C2'" "H2''" sing N N 183
DG "C1'" N9 sing N N 184
DG "C1'" "H1'" sing N N 185
DG N9 C8 sing Y N 186
DG N9 C4 sing Y N 187
DG C8 N7 doub Y N 188
DG C8 H8 sing N N 189
DG N7 C5 sing Y N 190
DG C5 C6 sing N N 191
DG C5 C4 doub Y N 192
DG C6 O6 doub N N 193
DG C6 N1 sing N N 194
DG N1 C2 sing N N 195
DG N1 H1 sing N N 196
DG C2 N2 sing N N 197
DG C2 N3 doub N N 198
DG N2 H21 sing N N 199
DG N2 H22 sing N N 200
DG N3 C4 sing N N 201
DT OP3 P sing N N 202
DT OP3 HOP3 sing N N 203
DT P OP1 doub N N 204
DT P OP2 sing N N 205
DT P "O5'" sing N N 206
DT OP2 HOP2 sing N N 207
DT "O5'" "C5'" sing N N 208
DT "C5'" "C4'" sing N N 209
DT "C5'" "H5'" sing N N 210
DT "C5'" "H5''" sing N N 211
DT "C4'" "O4'" sing N N 212
DT "C4'" "C3'" sing N N 213
DT "C4'" "H4'" sing N N 214
DT "O4'" "C1'" sing N N 215
DT "C3'" "O3'" sing N N 216
DT "C3'" "C2'" sing N N 217
DT "C3'" "H3'" sing N N 218
DT "O3'" "HO3'" sing N N 219
DT "C2'" "C1'" sing N N 220
DT "C2'" "H2'" sing N N 221
DT "C2'" "H2''" sing N N 222
DT "C1'" N1 sing N N 223
DT "C1'" "H1'" sing N N 224
DT N1 C2 sing N N 225
DT N1 C6 sing N N 226
DT C2 O2 doub N N 227
DT C2 N3 sing N N 228
DT N3 C4 sing N N 229
DT N3 H3 sing N N 230
DT C4 O4 doub N N 231
DT C4 C5 sing N N 232
DT C5 C7 sing N N 233
DT C5 C6 doub N N 234
DT C7 H71 sing N N 235
DT C7 H72 sing N N 236
DT C7 H73 sing N N 237
DT C6 H6 sing N N 238
HOH O H1 sing N N 239
HOH O H2 sing N N 240
#
loop_
_ndb_struct_conf_na.entry_id
_ndb_struct_conf_na.feature
3QSC 'double helix'
3QSC 'parallel strands'
3QSC 'mismatched base pair'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A DG 2 1_555 A DG 8 1_555 1.683 3.337 0.106 -10.727 -7.835 -91.675 1 X_DG1002:DG1008_X X 1002 ? X 1008 ? 6 3
1 A DG 3 1_555 A DG 9 1_555 1.580 3.504 0.358 -13.710 11.153 -90.009 2 X_DG1003:DG1009_X X 1003 ? X 1009 ? 6 3
1 A DG 4 1_555 A DG 10 1_555 1.759 3.629 -0.317 4.514 -3.290 -87.550 3 X_DG1004:DG1010_X X 1004 ? X 1010 ? 6 3
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A DG 2 1_555 A DG 8 1_555 A DG 3 1_555 A DG 9 1_555 -0.770 -1.056 3.609 -1.664 -0.197 32.079 -1.870 1.060 3.649 -0.356 3.009
32.122 1 XX_DG1002DG1003:DG1009DG1008_XX X 1002 ? X 1008 ? X 1003 ? X 1009 ?
1 A DG 3 1_555 A DG 9 1_555 A DG 4 1_555 A DG 10 1_555 -0.565 -0.413 2.998 5.732 2.590 24.743 -1.594 2.738 2.743 5.922 -13.107
25.518 2 XX_DG1003DG1004:DG1010DG1009_XX X 1003 ? X 1009 ? X 1004 ? X 1010 ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2 'POTASSIUM ION' K
3
;[2,2'-{(4,5-difluorobenzene-1,2-diyl)bis[(nitrilo-kappaN)methylylidene]}bis{5-[2-(piperidin-1-yl)ethoxy]phenolato-kappaO}(2-)]copper (II)
;
CUF
4 water HOH
#
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'experimental model'
_pdbx_initial_refinement_model.source_name PDB
_pdbx_initial_refinement_model.accession_code 1K8P
_pdbx_initial_refinement_model.details ?
#