data_3MIJ
#
_entry.id 3MIJ
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.379
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 3MIJ pdb_00003mij 10.2210/pdb3mij/pdb
NDB NA0512 ? ?
RCSB RCSB058588 ? ?
WWPDB D_1000058588 ? ?
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 3MIJ
_pdbx_database_status.recvd_initial_deposition_date 2010-04-10
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.SG_entry ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Collie, G.W.' 1
'Neidle, S.' 2
'Parkinson, G.N.' 3
#
_citation.id primary
_citation.title 'Structural basis of telomeric RNA quadruplex-acridine ligand recognition.'
_citation.journal_abbrev J.Am.Chem.Soc.
_citation.journal_volume 133
_citation.page_first 2721
_citation.page_last 2728
_citation.year 2011
_citation.journal_id_ASTM JACSAT
_citation.country US
_citation.journal_id_ISSN 0002-7863
_citation.journal_id_CSD 0004
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 21291211
_citation.pdbx_database_id_DOI 10.1021/ja109767y
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Collie, G.W.' 1 ?
primary 'Sparapani, S.' 2 ?
primary 'Parkinson, G.N.' 3 ?
primary 'Neidle, S.' 4 ?
#
_cell.entry_id 3MIJ
_cell.length_a 56.606
_cell.length_b 56.606
_cell.length_c 56.606
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 90.00
_cell.Z_PDB 12
_cell.pdbx_unique_axis ?
_cell.length_a_esd ?
_cell.length_b_esd ?
_cell.length_c_esd ?
_cell.angle_alpha_esd ?
_cell.angle_beta_esd ?
_cell.angle_gamma_esd ?
#
_symmetry.entry_id 3MIJ
_symmetry.space_group_name_H-M 'P 2 3'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 195
_symmetry.space_group_name_Hall ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn
;RNA (5'-R(*UP*AP*GP*GP*GP*UP*UP*AP*GP*GP*GP*U)-3')
;
3909.352 1 ? ? ? 'Human telomeric RNA sequence'
2 non-polymer syn 'POTASSIUM ION' 39.098
2 ? ? ? ?
3 non-polymer syn "N,N'-[acridine-3,6-diylbis(1H-1,2,3-triazole-1,4-diylbenzene-3,1-diyl)]bis[3-(diethylamino)propanamide]"
749.906 1 ? ? ? ?
4 water nat water 18.015
16 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type polyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code UAGGGUUAGGGU
_entity_poly.pdbx_seq_one_letter_code_can UAGGGUUAGGGU
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 U n
1 2 A n
1 3 G n
1 4 G n
1 5 G n
1 6 U n
1 7 U n
1 8 A n
1 9 G n
1 10 G n
1 11 G n
1 12 U n
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num ?
_pdbx_entity_src_syn.pdbx_end_seq_num ?
_pdbx_entity_src_syn.organism_scientific 'Homo sapiens'
_pdbx_entity_src_syn.organism_common_name human
_pdbx_entity_src_syn.ncbi_taxonomy_id 9606
_pdbx_entity_src_syn.details 'This sequence occurs naturally in humans.'
#
_struct_ref.id 1
_struct_ref.db_name PDB
_struct_ref.db_code 3MIJ
_struct_ref.pdbx_db_accession 3MIJ
_struct_ref.entity_id 1
_struct_ref.pdbx_align_begin ?
_struct_ref.pdbx_seq_one_letter_code UAGGGUUAGGGU
_struct_ref.pdbx_db_isoform ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 3MIJ
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 12
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession 3MIJ
_struct_ref_seq.db_align_beg 1
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 12
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 12
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ?
'C10 H14 N5 O7 P' 347.221
G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ?
'C10 H14 N5 O8 P' 363.221
HOH non-polymer . WATER ?
'H2 O' 18.015
K non-polymer . 'POTASSIUM ION' ?
'K 1' 39.098
R14 non-polymer . "N,N'-[acridine-3,6-diylbis(1H-1,2,3-triazole-1,4-diylbenzene-3,1-diyl)]bis[3-(diethylamino)propanamide]"
'triazole-acridine conjugate' 'C43 H47 N11 O2' 749.906
U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ?
'C9 H13 N2 O9 P' 324.181
#
_exptl.entry_id 3MIJ
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number 1
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 3.87
_exptl_crystal.density_percent_sol 68.19
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.preparation ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.temp 285
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 6.5
_exptl_crystal_grow.pdbx_details
;MPD, sodium chloride, potassium chloride, sodium cacodylate, potassium cacodylate, spermine, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 285K
;
_exptl_crystal_grow.pdbx_pH_range ?
#
_diffrn.id 1
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector CCD
_diffrn_detector.type 'ADSC QUANTUM 315'
_diffrn_detector.pdbx_collection_date 2010-02-01
_diffrn_detector.details Monochromator
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 0.97630
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source SYNCHROTRON
_diffrn_source.type 'DIAMOND BEAMLINE I04'
_diffrn_source.pdbx_synchrotron_site Diamond
_diffrn_source.pdbx_synchrotron_beamline I04
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list 0.97630
#
_reflns.entry_id 3MIJ
_reflns.observed_criterion_sigma_I 2.0
_reflns.observed_criterion_sigma_F 2.0
_reflns.d_resolution_low 17.90
_reflns.d_resolution_high 2.40
_reflns.number_obs 2511
_reflns.number_all 2511
_reflns.percent_possible_obs 100
_reflns.pdbx_Rmerge_I_obs 0.055
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_sigmaI 16.1
_reflns.B_iso_Wilson_estimate 26.462
_reflns.pdbx_redundancy 6.6
_reflns.R_free_details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
#
_reflns_shell.d_res_high 2.40
_reflns_shell.d_res_low 2.49
_reflns_shell.percent_possible_all 100
_reflns_shell.Rmerge_I_obs 0.368
_reflns_shell.pdbx_Rsym_value ?
_reflns_shell.meanI_over_sigI_obs 4.3
_reflns_shell.pdbx_redundancy 6.78
_reflns_shell.percent_possible_obs ?
_reflns_shell.number_unique_all ?
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_unique_obs ?
_reflns_shell.pdbx_chi_squared ?
_reflns_shell.pdbx_diffrn_id ?
_reflns_shell.pdbx_ordinal 1
#
_refine.entry_id 3MIJ
_refine.ls_number_reflns_obs 1901
_refine.ls_number_reflns_all ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 16.34
_refine.ls_d_res_high 2.60
_refine.ls_percent_reflns_obs 99.95
_refine.ls_R_factor_obs 0.23603
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work 0.23543
_refine.ls_R_factor_R_free 0.24752
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free 4.6
_refine.ls_number_reflns_R_free 91
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.correlation_coeff_Fo_to_Fc 0.942
_refine.correlation_coeff_Fo_to_Fc_free 0.956
_refine.B_iso_mean 26.462
_refine.aniso_B[1][1] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[3][3] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][3] ?
_refine.solvent_model_details MASK
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_solvent_vdw_probe_radii 1.40
_refine.pdbx_solvent_ion_probe_radii 0.80
_refine.pdbx_solvent_shrinkage_radii 0.80
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS'
_refine.pdbx_starting_model 'PDB ID 3IBK'
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD'
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_overall_ESU_R 0.476
_refine.pdbx_overall_ESU_R_Free 0.274
_refine.overall_SU_ML 0.227
_refine.overall_SU_B 21.757
_refine.ls_redundancy_reflns_obs ?
_refine.B_iso_min ?
_refine.B_iso_max ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_overall_phase_error ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 259
_refine_hist.pdbx_number_atoms_ligand 58
_refine_hist.number_atoms_solvent 16
_refine_hist.number_atoms_total 333
_refine_hist.d_res_high 2.60
_refine_hist.d_res_low 16.34
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
r_bond_refined_d 0.010 0.021 ? 352 'X-RAY DIFFRACTION' ?
r_angle_refined_deg 1.018 2.994 ? 538 'X-RAY DIFFRACTION' ?
r_chiral_restr 0.052 0.200 ? 59 'X-RAY DIFFRACTION' ?
r_gen_planes_refined 0.008 0.021 ? 186 'X-RAY DIFFRACTION' ?
r_scbond_it 1.244 3.000 ? 352 'X-RAY DIFFRACTION' ?
r_scangle_it 2.138 4.500 ? 538 'X-RAY DIFFRACTION' ?
#
_refine_ls_shell.pdbx_total_number_of_bins_used 20
_refine_ls_shell.d_res_high 2.600
_refine_ls_shell.d_res_low 2.666
_refine_ls_shell.number_reflns_R_work 142
_refine_ls_shell.R_factor_R_work 0.497
_refine_ls_shell.percent_reflns_obs 100.00
_refine_ls_shell.R_factor_R_free 0.456
_refine_ls_shell.R_factor_R_free_error ?
_refine_ls_shell.percent_reflns_R_free ?
_refine_ls_shell.number_reflns_R_free 2
_refine_ls_shell.number_reflns_all ?
_refine_ls_shell.R_factor_all ?
_refine_ls_shell.number_reflns_obs 142
_refine_ls_shell.redundancy_reflns_obs ?
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
#
_struct.entry_id 3MIJ
_struct.title 'Crystal structure of a telomeric RNA G-quadruplex complexed with an acridine-based ligand.'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 3MIJ
_struct_keywords.pdbx_keywords RNA
_struct_keywords.text 'Quadruplex, RNA-ligand complex, RNA, telomeric'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 2 ?
D N N 3 ?
E N N 4 ?
#
_struct_biol.id 1
_struct_biol.details ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
metalc1 metalc ? ? A G 3 O6 ? ? ? 1_555 C K . K ? ? A G 3 A K 22 1_555 ? ? ? ? ? ? ? 2.623 ? ?
metalc2 metalc ? ? A G 4 O6 ? ? ? 1_555 B K . K ? ? A G 4 A K 21 1_555 ? ? ? ? ? ? ? 2.775 ? ?
metalc3 metalc ? ? A G 4 O6 ? ? ? 1_555 C K . K ? ? A G 4 A K 22 1_555 ? ? ? ? ? ? ? 3.334 ? ?
metalc4 metalc ? ? A G 5 O6 ? ? ? 1_555 B K . K ? ? A G 5 A K 21 1_555 ? ? ? ? ? ? ? 2.701 ? ?
metalc5 metalc ? ? A G 9 O6 ? ? ? 1_555 C K . K ? ? A G 9 A K 22 1_555 ? ? ? ? ? ? ? 2.635 ? ?
metalc6 metalc ? ? A G 10 O6 ? ? ? 1_555 B K . K ? ? A G 10 A K 21 1_555 ? ? ? ? ? ? ? 2.727 ? ?
metalc7 metalc ? ? A G 10 O6 ? ? ? 1_555 C K . K ? ? A G 10 A K 22 1_555 ? ? ? ? ? ? ? 2.982 ? ?
metalc8 metalc ? ? A G 11 O6 ? ? ? 1_555 B K . K ? ? A G 11 A K 21 1_555 ? ? ? ? ? ? ? 2.813 ? ?
hydrog1 hydrog ? ? A G 3 N1 ? ? ? 1_555 A G 9 O6 ? ? A G 3 A G 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ?
hydrog2 hydrog ? ? A G 3 N2 ? ? ? 1_555 A G 9 N7 ? ? A G 3 A G 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ?
hydrog3 hydrog ? ? A G 4 N1 ? ? ? 1_555 A G 10 O6 ? ? A G 4 A G 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ?
hydrog4 hydrog ? ? A G 4 N2 ? ? ? 1_555 A G 10 N7 ? ? A G 4 A G 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ?
hydrog5 hydrog ? ? A G 5 N1 ? ? ? 1_555 A G 11 O6 ? ? A G 5 A G 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ?
hydrog6 hydrog ? ? A G 5 N2 ? ? ? 1_555 A G 11 N7 ? ? A G 5 A G 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
metalc ? ?
hydrog ? ?
#
loop_
_struct_site.id
_struct_site.pdbx_evidence_code
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_struct_site.pdbx_auth_ins_code
_struct_site.pdbx_num_residues
_struct_site.details
AC1 Software A K 21 ? 10 'BINDING SITE FOR RESIDUE K A 21'
AC2 Software A K 22 ? 10 'BINDING SITE FOR RESIDUE K A 22'
AC3 Software A R14 30 ? 12 'BINDING SITE FOR RESIDUE R14 A 30'
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 10 G A 4 ? G A 4 . ? 4_545 ?
2 AC1 10 G A 4 ? G A 4 . ? 1_555 ?
3 AC1 10 G A 5 ? G A 5 . ? 4_545 ?
4 AC1 10 G A 5 ? G A 5 . ? 1_555 ?
5 AC1 10 G A 10 ? G A 10 . ? 1_555 ?
6 AC1 10 G A 10 ? G A 10 . ? 4_545 ?
7 AC1 10 G A 11 ? G A 11 . ? 4_545 ?
8 AC1 10 G A 11 ? G A 11 . ? 1_555 ?
9 AC1 10 K C . ? K A 22 . ? 4_545 ?
10 AC1 10 K C . ? K A 22 . ? 1_555 ?
11 AC2 10 G A 3 ? G A 3 . ? 4_545 ?
12 AC2 10 G A 3 ? G A 3 . ? 1_555 ?
13 AC2 10 G A 4 ? G A 4 . ? 1_555 ?
14 AC2 10 G A 4 ? G A 4 . ? 4_545 ?
15 AC2 10 G A 9 ? G A 9 . ? 4_545 ?
16 AC2 10 G A 9 ? G A 9 . ? 1_555 ?
17 AC2 10 G A 10 ? G A 10 . ? 1_555 ?
18 AC2 10 G A 10 ? G A 10 . ? 4_545 ?
19 AC2 10 K B . ? K A 21 . ? 4_545 ?
20 AC2 10 K B . ? K A 21 . ? 1_555 ?
21 AC3 12 U A 1 ? U A 1 . ? 1_555 ?
22 AC3 12 U A 1 ? U A 1 . ? 3_655 ?
23 AC3 12 A A 2 ? A A 2 . ? 1_555 ?
24 AC3 12 G A 3 ? G A 3 . ? 1_555 ?
25 AC3 12 U A 6 ? U A 6 . ? 10_555 ?
26 AC3 12 A A 8 ? A A 8 . ? 1_555 ?
27 AC3 12 G A 9 ? G A 9 . ? 4_545 ?
28 AC3 12 G A 10 ? G A 10 . ? 10_555 ?
29 AC3 12 HOH E . ? HOH A 45 . ? 1_555 ?
30 AC3 12 HOH E . ? HOH A 48 . ? 1_555 ?
31 AC3 12 HOH E . ? HOH A 54 . ? 1_555 ?
32 AC3 12 HOH E . ? HOH A 56 . ? 3_655 ?
#
_database_PDB_matrix.entry_id 3MIJ
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_atom_sites.entry_id 3MIJ
_atom_sites.fract_transf_matrix[1][1] 0.017666
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.017666
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.017666
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
K
N
O
P
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 O "O5'" . U A 1 1 ? 23.282 -12.992 10.030 1.00 28.59 ? 1 U A "O5'" 1
ATOM 2 C "C5'" . U A 1 1 ? 24.520 -12.299 9.808 1.00 28.04 ? 1 U A "C5'" 1
ATOM 3 C "C4'" . U A 1 1 ? 25.113 -12.625 8.434 1.00 27.53 ? 1 U A "C4'" 1
ATOM 4 O "O4'" . U A 1 1 ? 26.303 -13.455 8.594 1.00 27.05 ? 1 U A "O4'" 1
ATOM 5 C "C3'" . U A 1 1 ? 24.196 -13.395 7.478 1.00 26.67 ? 1 U A "C3'" 1
ATOM 6 O "O3'" . U A 1 1 ? 23.463 -12.491 6.654 1.00 25.48 ? 1 U A "O3'" 1
ATOM 7 C "C2'" . U A 1 1 ? 25.192 -14.239 6.679 1.00 26.80 ? 1 U A "C2'" 1
ATOM 8 O "O2'" . U A 1 1 ? 25.820 -13.512 5.634 1.00 26.48 ? 1 U A "O2'" 1
ATOM 9 C "C1'" . U A 1 1 ? 26.206 -14.595 7.752 1.00 26.42 ? 1 U A "C1'" 1
ATOM 10 N N1 . U A 1 1 ? 25.854 -15.818 8.592 1.00 25.35 ? 1 U A N1 1
ATOM 11 C C2 . U A 1 1 ? 25.991 -17.085 8.051 1.00 24.86 ? 1 U A C2 1
ATOM 12 O O2 . U A 1 1 ? 26.365 -17.284 6.904 1.00 24.67 ? 1 U A O2 1
ATOM 13 N N3 . U A 1 1 ? 25.666 -18.118 8.912 1.00 24.25 ? 1 U A N3 1
ATOM 14 C C4 . U A 1 1 ? 25.232 -18.006 10.231 1.00 24.29 ? 1 U A C4 1
ATOM 15 O O4 . U A 1 1 ? 24.982 -19.006 10.890 1.00 23.69 ? 1 U A O4 1
ATOM 16 C C5 . U A 1 1 ? 25.112 -16.662 10.712 1.00 24.51 ? 1 U A C5 1
ATOM 17 C C6 . U A 1 1 ? 25.427 -15.647 9.899 1.00 25.19 ? 1 U A C6 1
ATOM 18 P P . A A 1 2 ? 22.602 -13.026 5.417 1.00 25.90 ? 2 A A P 1
ATOM 19 O OP1 . A A 1 2 ? 22.267 -11.855 4.576 1.00 26.49 ? 2 A A OP1 1
ATOM 20 O OP2 . A A 1 2 ? 21.518 -13.885 5.943 1.00 25.62 ? 2 A A OP2 1
ATOM 21 O "O5'" . A A 1 2 ? 23.655 -13.961 4.637 1.00 24.72 ? 2 A A "O5'" 1
ATOM 22 C "C5'" . A A 1 2 ? 23.513 -14.250 3.256 1.00 23.35 ? 2 A A "C5'" 1
ATOM 23 C "C4'" . A A 1 2 ? 23.039 -15.674 3.055 1.00 21.42 ? 2 A A "C4'" 1
ATOM 24 O "O4'" . A A 1 2 ? 23.384 -16.471 4.215 1.00 20.90 ? 2 A A "O4'" 1
ATOM 25 C "C3'" . A A 1 2 ? 21.524 -15.817 2.869 1.00 21.03 ? 2 A A "C3'" 1
ATOM 26 O "O3'" . A A 1 2 ? 21.239 -16.641 1.765 1.00 19.71 ? 2 A A "O3'" 1
ATOM 27 C "C2'" . A A 1 2 ? 21.067 -16.502 4.148 1.00 21.30 ? 2 A A "C2'" 1
ATOM 28 O "O2'" . A A 1 2 ? 19.948 -17.352 3.934 1.00 22.15 ? 2 A A "O2'" 1
ATOM 29 C "C1'" . A A 1 2 ? 22.304 -17.316 4.506 1.00 20.21 ? 2 A A "C1'" 1
ATOM 30 N N9 . A A 1 2 ? 22.348 -17.692 5.914 1.00 19.58 ? 2 A A N9 1
ATOM 31 C C8 . A A 1 2 ? 22.138 -16.878 6.991 1.00 19.09 ? 2 A A C8 1
ATOM 32 N N7 . A A 1 2 ? 22.222 -17.494 8.141 1.00 18.94 ? 2 A A N7 1
ATOM 33 C C5 . A A 1 2 ? 22.492 -18.808 7.798 1.00 18.81 ? 2 A A C5 1
ATOM 34 C C6 . A A 1 2 ? 22.692 -19.978 8.567 1.00 18.15 ? 2 A A C6 1
ATOM 35 N N6 . A A 1 2 ? 22.647 -20.002 9.898 1.00 18.86 ? 2 A A N6 1
ATOM 36 N N1 . A A 1 2 ? 22.942 -21.126 7.916 1.00 17.60 ? 2 A A N1 1
ATOM 37 C C2 . A A 1 2 ? 23.010 -21.107 6.584 1.00 18.58 ? 2 A A C2 1
ATOM 38 N N3 . A A 1 2 ? 22.830 -20.081 5.749 1.00 19.82 ? 2 A A N3 1
ATOM 39 C C4 . A A 1 2 ? 22.569 -18.947 6.428 1.00 19.55 ? 2 A A C4 1
ATOM 40 P P . G A 1 3 ? 21.399 -16.104 0.287 1.00 17.68 ? 3 G A P 1
ATOM 41 O OP1 . G A 1 3 ? 22.777 -15.595 0.125 1.00 16.26 ? 3 G A OP1 1
ATOM 42 O OP2 . G A 1 3 ? 20.234 -15.254 -0.005 1.00 17.22 ? 3 G A OP2 1
ATOM 43 O "O5'" . G A 1 3 ? 21.290 -17.443 -0.541 1.00 16.73 ? 3 G A "O5'" 1
ATOM 44 C "C5'" . G A 1 3 ? 22.365 -18.324 -0.496 1.00 16.54 ? 3 G A "C5'" 1
ATOM 45 C "C4'" . G A 1 3 ? 22.880 -18.590 -1.880 1.00 16.39 ? 3 G A "C4'" 1
ATOM 46 O "O4'" . G A 1 3 ? 24.056 -19.417 -1.757 1.00 16.65 ? 3 G A "O4'" 1
ATOM 47 C "C3'" . G A 1 3 ? 21.922 -19.373 -2.775 1.00 16.62 ? 3 G A "C3'" 1
ATOM 48 O "O3'" . G A 1 3 ? 21.164 -18.499 -3.575 1.00 16.56 ? 3 G A "O3'" 1
ATOM 49 C "C2'" . G A 1 3 ? 22.879 -20.181 -3.626 1.00 17.41 ? 3 G A "C2'" 1
ATOM 50 O "O2'" . G A 1 3 ? 23.471 -19.396 -4.653 1.00 17.36 ? 3 G A "O2'" 1
ATOM 51 C "C1'" . G A 1 3 ? 23.925 -20.550 -2.589 1.00 16.73 ? 3 G A "C1'" 1
ATOM 52 N N9 . G A 1 3 ? 23.609 -21.709 -1.748 1.00 16.11 ? 3 G A N9 1
ATOM 53 C C8 . G A 1 3 ? 23.438 -21.704 -0.388 1.00 16.27 ? 3 G A C8 1
ATOM 54 N N7 . G A 1 3 ? 23.194 -22.887 0.114 1.00 15.73 ? 3 G A N7 1
ATOM 55 C C5 . G A 1 3 ? 23.224 -23.727 -0.977 1.00 15.83 ? 3 G A C5 1
ATOM 56 C C6 . G A 1 3 ? 23.038 -25.118 -1.041 1.00 17.46 ? 3 G A C6 1
ATOM 57 O O6 . G A 1 3 ? 22.782 -25.908 -0.113 1.00 18.98 ? 3 G A O6 1
ATOM 58 N N1 . G A 1 3 ? 23.146 -25.606 -2.334 1.00 17.53 ? 3 G A N1 1
ATOM 59 C C2 . G A 1 3 ? 23.395 -24.840 -3.434 1.00 17.10 ? 3 G A C2 1
ATOM 60 N N2 . G A 1 3 ? 23.461 -25.501 -4.594 1.00 16.08 ? 3 G A N2 1
ATOM 61 N N3 . G A 1 3 ? 23.582 -23.521 -3.395 1.00 17.08 ? 3 G A N3 1
ATOM 62 C C4 . G A 1 3 ? 23.480 -23.031 -2.134 1.00 16.23 ? 3 G A C4 1
ATOM 63 P P . G A 1 4 ? 19.591 -18.728 -3.757 1.00 19.23 ? 4 G A P 1
ATOM 64 O OP1 . G A 1 4 ? 19.019 -17.471 -4.281 1.00 19.27 ? 4 G A OP1 1
ATOM 65 O OP2 . G A 1 4 ? 19.035 -19.314 -2.510 1.00 17.43 ? 4 G A OP2 1
ATOM 66 O "O5'" . G A 1 4 ? 19.529 -19.836 -4.897 1.00 19.42 ? 4 G A "O5'" 1
ATOM 67 C "C5'" . G A 1 4 ? 20.131 -19.594 -6.147 1.00 19.67 ? 4 G A "C5'" 1
ATOM 68 C "C4'" . G A 1 4 ? 20.182 -20.869 -6.960 1.00 19.48 ? 4 G A "C4'" 1
ATOM 69 O "O4'" . G A 1 4 ? 21.081 -21.802 -6.332 1.00 20.10 ? 4 G A "O4'" 1
ATOM 70 C "C3'" . G A 1 4 ? 18.885 -21.633 -7.042 1.00 18.85 ? 4 G A "C3'" 1
ATOM 71 O "O3'" . G A 1 4 ? 18.107 -21.107 -8.060 1.00 18.90 ? 4 G A "O3'" 1
ATOM 72 C "C2'" . G A 1 4 ? 19.400 -23.018 -7.400 1.00 19.36 ? 4 G A "C2'" 1
ATOM 73 O "O2'" . G A 1 4 ? 19.842 -23.101 -8.737 1.00 20.00 ? 4 G A "O2'" 1
ATOM 74 C "C1'" . G A 1 4 ? 20.595 -23.121 -6.492 1.00 18.71 ? 4 G A "C1'" 1
ATOM 75 N N9 . G A 1 4 ? 20.304 -23.661 -5.175 1.00 18.83 ? 4 G A N9 1
ATOM 76 C C8 . G A 1 4 ? 20.158 -22.947 -4.010 1.00 19.60 ? 4 G A C8 1
ATOM 77 N N7 . G A 1 4 ? 19.921 -23.694 -2.966 1.00 19.31 ? 4 G A N7 1
ATOM 78 C C5 . G A 1 4 ? 19.919 -24.979 -3.473 1.00 18.49 ? 4 G A C5 1
ATOM 79 C C6 . G A 1 4 ? 19.722 -26.193 -2.811 1.00 19.02 ? 4 G A C6 1
ATOM 80 O O6 . G A 1 4 ? 19.515 -26.379 -1.598 1.00 20.70 ? 4 G A O6 1
ATOM 81 N N1 . G A 1 4 ? 19.786 -27.279 -3.672 1.00 18.35 ? 4 G A N1 1
ATOM 82 C C2 . G A 1 4 ? 20.032 -27.194 -5.017 1.00 17.86 ? 4 G A C2 1
ATOM 83 N N2 . G A 1 4 ? 20.072 -28.350 -5.686 1.00 16.52 ? 4 G A N2 1
ATOM 84 N N3 . G A 1 4 ? 20.227 -26.052 -5.659 1.00 18.61 ? 4 G A N3 1
ATOM 85 C C4 . G A 1 4 ? 20.152 -24.984 -4.824 1.00 18.51 ? 4 G A C4 1
ATOM 86 P P . G A 1 5 ? 16.558 -21.451 -8.131 1.00 19.53 ? 5 G A P 1
ATOM 87 O OP1 . G A 1 5 ? 16.004 -20.796 -9.328 1.00 20.75 ? 5 G A OP1 1
ATOM 88 O OP2 . G A 1 5 ? 15.956 -21.185 -6.803 1.00 18.72 ? 5 G A OP2 1
ATOM 89 O "O5'" . G A 1 5 ? 16.569 -23.017 -8.381 1.00 19.43 ? 5 G A "O5'" 1
ATOM 90 C "C5'" . G A 1 5 ? 16.790 -23.549 -9.682 1.00 20.88 ? 5 G A "C5'" 1
ATOM 91 C "C4'" . G A 1 5 ? 16.433 -25.025 -9.686 1.00 21.33 ? 5 G A "C4'" 1
ATOM 92 O "O4'" . G A 1 5 ? 16.994 -25.628 -8.488 1.00 21.41 ? 5 G A "O4'" 1
ATOM 93 C "C3'" . G A 1 5 ? 14.926 -25.307 -9.617 1.00 21.63 ? 5 G A "C3'" 1
ATOM 94 O "O3'" . G A 1 5 ? 14.609 -26.527 -10.240 1.00 21.73 ? 5 G A "O3'" 1
ATOM 95 C "C2'" . G A 1 5 ? 14.695 -25.418 -8.131 1.00 21.75 ? 5 G A "C2'" 1
ATOM 96 O "O2'" . G A 1 5 ? 13.550 -26.176 -7.817 1.00 23.29 ? 5 G A "O2'" 1
ATOM 97 C "C1'" . G A 1 5 ? 15.943 -26.184 -7.729 1.00 21.57 ? 5 G A "C1'" 1
ATOM 98 N N9 . G A 1 5 ? 16.191 -26.095 -6.294 1.00 21.45 ? 5 G A N9 1
ATOM 99 C C8 . G A 1 5 ? 16.227 -24.962 -5.518 1.00 21.43 ? 5 G A C8 1
ATOM 100 N N7 . G A 1 5 ? 16.391 -25.212 -4.250 1.00 21.47 ? 5 G A N7 1
ATOM 101 C C5 . G A 1 5 ? 16.450 -26.594 -4.182 1.00 21.27 ? 5 G A C5 1
ATOM 102 C C6 . G A 1 5 ? 16.610 -27.445 -3.068 1.00 21.60 ? 5 G A C6 1
ATOM 103 O O6 . G A 1 5 ? 16.755 -27.133 -1.872 1.00 22.27 ? 5 G A O6 1
ATOM 104 N N1 . G A 1 5 ? 16.604 -28.790 -3.433 1.00 21.04 ? 5 G A N1 1
ATOM 105 C C2 . G A 1 5 ? 16.456 -29.246 -4.723 1.00 21.13 ? 5 G A C2 1
ATOM 106 N N2 . G A 1 5 ? 16.469 -30.573 -4.900 1.00 20.87 ? 5 G A N2 1
ATOM 107 N N3 . G A 1 5 ? 16.303 -28.456 -5.771 1.00 20.88 ? 5 G A N3 1
ATOM 108 C C4 . G A 1 5 ? 16.311 -27.149 -5.427 1.00 21.11 ? 5 G A C4 1
ATOM 109 P P . U A 1 6 ? 14.006 -26.536 -11.706 1.00 22.10 ? 6 U A P 1
ATOM 110 O OP1 . U A 1 6 ? 13.566 -25.161 -12.042 1.00 21.76 ? 6 U A OP1 1
ATOM 111 O OP2 . U A 1 6 ? 13.056 -27.661 -11.797 1.00 22.66 ? 6 U A OP2 1
ATOM 112 O "O5'" . U A 1 6 ? 15.291 -26.908 -12.564 1.00 22.91 ? 6 U A "O5'" 1
ATOM 113 C "C5'" . U A 1 6 ? 15.169 -27.480 -13.862 1.00 25.21 ? 6 U A "C5'" 1
ATOM 114 C "C4'" . U A 1 6 ? 16.008 -26.695 -14.857 1.00 26.21 ? 6 U A "C4'" 1
ATOM 115 O "O4'" . U A 1 6 ? 15.243 -26.470 -16.070 1.00 26.16 ? 6 U A "O4'" 1
ATOM 116 C "C3'" . U A 1 6 ? 16.415 -25.326 -14.334 1.00 27.40 ? 6 U A "C3'" 1
ATOM 117 O "O3'" . U A 1 6 ? 17.742 -25.025 -14.634 1.00 27.47 ? 6 U A "O3'" 1
ATOM 118 C "C2'" . U A 1 6 ? 15.439 -24.350 -14.992 1.00 27.63 ? 6 U A "C2'" 1
ATOM 119 O "O2'" . U A 1 6 ? 16.016 -23.100 -15.349 1.00 28.75 ? 6 U A "O2'" 1
ATOM 120 C "C1'" . U A 1 6 ? 14.949 -25.095 -16.229 1.00 26.41 ? 6 U A "C1'" 1
ATOM 121 N N1 . U A 1 6 ? 13.501 -24.910 -16.356 1.00 24.85 ? 6 U A N1 1
ATOM 122 C C2 . U A 1 6 ? 12.931 -24.786 -17.596 1.00 23.69 ? 6 U A C2 1
ATOM 123 O O2 . U A 1 6 ? 13.557 -24.877 -18.635 1.00 22.81 ? 6 U A O2 1
ATOM 124 N N3 . U A 1 6 ? 11.579 -24.570 -17.568 1.00 23.60 ? 6 U A N3 1
ATOM 125 C C4 . U A 1 6 ? 10.773 -24.452 -16.445 1.00 24.02 ? 6 U A C4 1
ATOM 126 O O4 . U A 1 6 ? 9.576 -24.261 -16.570 1.00 25.51 ? 6 U A O4 1
ATOM 127 C C5 . U A 1 6 ? 11.448 -24.576 -15.194 1.00 23.81 ? 6 U A C5 1
ATOM 128 C C6 . U A 1 6 ? 12.757 -24.784 -15.197 1.00 24.45 ? 6 U A C6 1
ATOM 129 P P . U A 1 7 ? 18.389 -23.734 -13.954 1.00 27.78 ? 7 U A P 1
ATOM 130 O OP1 . U A 1 7 ? 19.585 -24.192 -13.214 1.00 29.02 ? 7 U A OP1 1
ATOM 131 O OP2 . U A 1 7 ? 17.339 -22.965 -13.232 1.00 26.84 ? 7 U A OP2 1
ATOM 132 O "O5'" . U A 1 7 ? 18.801 -22.882 -15.239 1.00 26.40 ? 7 U A "O5'" 1
ATOM 133 C "C5'" . U A 1 7 ? 20.112 -22.940 -15.749 1.00 25.69 ? 7 U A "C5'" 1
ATOM 134 C "C4'" . U A 1 7 ? 20.627 -21.540 -15.991 1.00 25.06 ? 7 U A "C4'" 1
ATOM 135 O "O4'" . U A 1 7 ? 19.803 -20.591 -15.261 1.00 26.29 ? 7 U A "O4'" 1
ATOM 136 C "C3'" . U A 1 7 ? 22.030 -21.266 -15.498 1.00 23.77 ? 7 U A "C3'" 1
ATOM 137 O "O3'" . U A 1 7 ? 22.988 -21.744 -16.443 1.00 21.71 ? 7 U A "O3'" 1
ATOM 138 C "C2'" . U A 1 7 ? 22.003 -19.731 -15.430 1.00 25.59 ? 7 U A "C2'" 1
ATOM 139 O "O2'" . U A 1 7 ? 22.195 -19.110 -16.694 1.00 25.12 ? 7 U A "O2'" 1
ATOM 140 C "C1'" . U A 1 7 ? 20.576 -19.447 -14.943 1.00 26.71 ? 7 U A "C1'" 1
ATOM 141 N N1 . U A 1 7 ? 20.464 -19.129 -13.447 1.00 28.57 ? 7 U A N1 1
ATOM 142 C C2 . U A 1 7 ? 20.613 -17.812 -13.018 1.00 29.00 ? 7 U A C2 1
ATOM 143 O O2 . U A 1 7 ? 20.831 -16.881 -13.780 1.00 29.82 ? 7 U A O2 1
ATOM 144 N N3 . U A 1 7 ? 20.499 -17.623 -11.650 1.00 28.75 ? 7 U A N3 1
ATOM 145 C C4 . U A 1 7 ? 20.259 -18.593 -10.683 1.00 28.53 ? 7 U A C4 1
ATOM 146 O O4 . U A 1 7 ? 20.184 -18.272 -9.500 1.00 27.58 ? 7 U A O4 1
ATOM 147 C C5 . U A 1 7 ? 20.118 -19.940 -11.198 1.00 28.94 ? 7 U A C5 1
ATOM 148 C C6 . U A 1 7 ? 20.220 -20.152 -12.528 1.00 29.32 ? 7 U A C6 1
ATOM 149 P P . A A 1 8 ? 23.688 -23.185 -16.301 1.00 20.82 ? 8 A A P 1
ATOM 150 O OP1 . A A 1 8 ? 24.886 -23.204 -17.164 1.00 20.77 ? 8 A A OP1 1
ATOM 151 O OP2 . A A 1 8 ? 22.657 -24.233 -16.467 1.00 20.99 ? 8 A A OP2 1
ATOM 152 O "O5'" . A A 1 8 ? 24.174 -23.213 -14.790 1.00 20.78 ? 8 A A "O5'" 1
ATOM 153 C "C5'" . A A 1 8 ? 25.049 -24.268 -14.333 1.00 19.03 ? 8 A A "C5'" 1
ATOM 154 C "C4'" . A A 1 8 ? 24.650 -24.772 -12.941 1.00 16.53 ? 8 A A "C4'" 1
ATOM 155 O "O4'" . A A 1 8 ? 24.944 -23.771 -11.928 1.00 14.87 ? 8 A A "O4'" 1
ATOM 156 C "C3'" . A A 1 8 ? 23.180 -25.126 -12.765 1.00 15.15 ? 8 A A "C3'" 1
ATOM 157 O "O3'" . A A 1 8 ? 23.068 -26.274 -11.964 1.00 17.52 ? 8 A A "O3'" 1
ATOM 158 C "C2'" . A A 1 8 ? 22.662 -23.911 -12.025 1.00 14.15 ? 8 A A "C2'" 1
ATOM 159 O "O2'" . A A 1 8 ? 21.503 -24.189 -11.278 1.00 14.10 ? 8 A A "O2'" 1
ATOM 160 C "C1'" . A A 1 8 ? 23.833 -23.630 -11.108 1.00 14.08 ? 8 A A "C1'" 1
ATOM 161 N N9 . A A 1 8 ? 23.829 -22.286 -10.588 1.00 15.09 ? 8 A A N9 1
ATOM 162 C C8 . A A 1 8 ? 23.811 -21.141 -11.308 1.00 15.72 ? 8 A A C8 1
ATOM 163 N N7 . A A 1 8 ? 23.786 -20.058 -10.573 1.00 16.80 ? 8 A A N7 1
ATOM 164 C C5 . A A 1 8 ? 23.794 -20.525 -9.280 1.00 15.84 ? 8 A A C5 1
ATOM 165 C C6 . A A 1 8 ? 23.779 -19.870 -8.034 1.00 16.35 ? 8 A A C6 1
ATOM 166 N N6 . A A 1 8 ? 23.752 -18.542 -7.896 1.00 15.72 ? 8 A A N6 1
ATOM 167 N N1 . A A 1 8 ? 23.786 -20.631 -6.930 1.00 16.71 ? 8 A A N1 1
ATOM 168 C C2 . A A 1 8 ? 23.809 -21.960 -7.069 1.00 17.38 ? 8 A A C2 1
ATOM 169 N N3 . A A 1 8 ? 23.830 -22.690 -8.185 1.00 17.56 ? 8 A A N3 1
ATOM 170 C C4 . A A 1 8 ? 23.819 -21.900 -9.268 1.00 16.22 ? 8 A A C4 1
ATOM 171 P P . G A 1 9 ? 23.294 -27.757 -12.555 1.00 19.72 ? 9 G A P 1
ATOM 172 O OP1 . G A 1 9 ? 24.566 -27.808 -13.318 1.00 18.24 ? 9 G A OP1 1
ATOM 173 O OP2 . G A 1 9 ? 22.028 -28.192 -13.179 1.00 19.32 ? 9 G A OP2 1
ATOM 174 O "O5'" . G A 1 9 ? 23.527 -28.601 -11.225 1.00 20.67 ? 9 G A "O5'" 1
ATOM 175 C "C5'" . G A 1 9 ? 22.434 -29.021 -10.418 1.00 19.98 ? 9 G A "C5'" 1
ATOM 176 C "C4'" . G A 1 9 ? 22.791 -30.358 -9.801 1.00 18.68 ? 9 G A "C4'" 1
ATOM 177 O "O4'" . G A 1 9 ? 23.859 -30.158 -8.853 1.00 17.56 ? 9 G A "O4'" 1
ATOM 178 C "C3'" . G A 1 9 ? 21.688 -31.038 -9.016 1.00 18.34 ? 9 G A "C3'" 1
ATOM 179 O "O3'" . G A 1 9 ? 20.925 -31.842 -9.886 1.00 17.60 ? 9 G A "O3'" 1
ATOM 180 C "C2'" . G A 1 9 ? 22.509 -31.909 -8.094 1.00 17.79 ? 9 G A "C2'" 1
ATOM 181 O "O2'" . G A 1 9 ? 23.047 -33.003 -8.804 1.00 19.64 ? 9 G A "O2'" 1
ATOM 182 C "C1'" . G A 1 9 ? 23.644 -30.979 -7.729 1.00 16.23 ? 9 G A "C1'" 1
ATOM 183 N N9 . G A 1 9 ? 23.453 -30.131 -6.548 1.00 14.16 ? 9 G A N9 1
ATOM 184 C C8 . G A 1 9 ? 23.468 -28.763 -6.511 1.00 14.59 ? 9 G A C8 1
ATOM 185 N N7 . G A 1 9 ? 23.328 -28.266 -5.308 1.00 12.83 ? 9 G A N7 1
ATOM 186 C C5 . G A 1 9 ? 23.255 -29.371 -4.498 1.00 11.61 ? 9 G A C5 1
ATOM 187 C C6 . G A 1 9 ? 23.103 -29.451 -3.112 1.00 11.21 ? 9 G A C6 1
ATOM 188 O O6 . G A 1 9 ? 22.997 -28.526 -2.293 1.00 10.50 ? 9 G A O6 1
ATOM 189 N N1 . G A 1 9 ? 23.046 -30.754 -2.670 1.00 11.84 ? 9 G A N1 1
ATOM 190 C C2 . G A 1 9 ? 23.146 -31.858 -3.471 1.00 14.31 ? 9 G A C2 1
ATOM 191 N N2 . G A 1 9 ? 23.083 -33.053 -2.857 1.00 15.37 ? 9 G A N2 1
ATOM 192 N N3 . G A 1 9 ? 23.298 -31.802 -4.786 1.00 14.60 ? 9 G A N3 1
ATOM 193 C C4 . G A 1 9 ? 23.335 -30.527 -5.234 1.00 13.51 ? 9 G A C4 1
ATOM 194 P P . G A 1 10 ? 19.355 -32.007 -9.668 1.00 18.12 ? 10 G A P 1
ATOM 195 O OP1 . G A 1 10 ? 18.799 -32.627 -10.891 1.00 16.20 ? 10 G A OP1 1
ATOM 196 O OP2 . G A 1 10 ? 18.836 -30.722 -9.164 1.00 17.24 ? 10 G A OP2 1
ATOM 197 O "O5'" . G A 1 10 ? 19.258 -33.056 -8.484 1.00 19.36 ? 10 G A "O5'" 1
ATOM 198 C "C5'" . G A 1 10 ? 19.675 -34.404 -8.693 1.00 21.23 ? 10 G A "C5'" 1
ATOM 199 C "C4'" . G A 1 10 ? 19.621 -35.189 -7.396 1.00 21.02 ? 10 G A "C4'" 1
ATOM 200 O "O4'" . G A 1 10 ? 20.527 -34.608 -6.448 1.00 21.18 ? 10 G A "O4'" 1
ATOM 201 C "C3'" . G A 1 10 ? 18.296 -35.141 -6.688 1.00 21.05 ? 10 G A "C3'" 1
ATOM 202 O "O3'" . G A 1 10 ? 17.468 -36.106 -7.242 1.00 20.16 ? 10 G A "O3'" 1
ATOM 203 C "C2'" . G A 1 10 ? 18.700 -35.491 -5.264 1.00 21.96 ? 10 G A "C2'" 1
ATOM 204 O "O2'" . G A 1 10 ? 18.947 -36.881 -5.106 1.00 23.78 ? 10 G A "O2'" 1
ATOM 205 C "C1'" . G A 1 10 ? 20.006 -34.737 -5.141 1.00 20.87 ? 10 G A "C1'" 1
ATOM 206 N N9 . G A 1 10 ? 19.924 -33.409 -4.557 1.00 20.29 ? 10 G A N9 1
ATOM 207 C C8 . G A 1 10 ? 19.949 -32.214 -5.231 1.00 20.50 ? 10 G A C8 1
ATOM 208 N N7 . G A 1 10 ? 19.916 -31.174 -4.443 1.00 20.73 ? 10 G A N7 1
ATOM 209 C C5 . G A 1 10 ? 19.880 -31.719 -3.170 1.00 20.41 ? 10 G A C5 1
ATOM 210 C C6 . G A 1 10 ? 19.820 -31.084 -1.920 1.00 21.70 ? 10 G A C6 1
ATOM 211 O O6 . G A 1 10 ? 19.802 -29.859 -1.672 1.00 22.53 ? 10 G A O6 1
ATOM 212 N N1 . G A 1 10 ? 19.782 -31.990 -0.871 1.00 21.70 ? 10 G A N1 1
ATOM 213 C C2 . G A 1 10 ? 19.806 -33.348 -1.019 1.00 21.66 ? 10 G A C2 1
ATOM 214 N N2 . G A 1 10 ? 19.770 -34.063 0.108 1.00 21.54 ? 10 G A N2 1
ATOM 215 N N3 . G A 1 10 ? 19.860 -33.965 -2.190 1.00 21.59 ? 10 G A N3 1
ATOM 216 C C4 . G A 1 10 ? 19.893 -33.088 -3.220 1.00 20.45 ? 10 G A C4 1
ATOM 217 P P . G A 1 11 ? 15.897 -35.926 -7.174 1.00 19.82 ? 11 G A P 1
ATOM 218 O OP1 . G A 1 11 ? 15.324 -36.914 -8.120 1.00 19.93 ? 11 G A OP1 1
ATOM 219 O OP2 . G A 1 11 ? 15.549 -34.490 -7.305 1.00 18.89 ? 11 G A OP2 1
ATOM 220 O "O5'" . G A 1 11 ? 15.584 -36.325 -5.660 1.00 20.00 ? 11 G A "O5'" 1
ATOM 221 C "C5'" . G A 1 11 ? 15.806 -37.636 -5.169 1.00 20.56 ? 11 G A "C5'" 1
ATOM 222 C "C4'" . G A 1 11 ? 15.469 -37.670 -3.693 1.00 21.60 ? 11 G A "C4'" 1
ATOM 223 O "O4'" . G A 1 11 ? 16.514 -36.992 -2.943 1.00 21.19 ? 11 G A "O4'" 1
ATOM 224 C "C3'" . G A 1 11 ? 14.208 -36.910 -3.311 1.00 22.63 ? 11 G A "C3'" 1
ATOM 225 O "O3'" . G A 1 11 ? 13.026 -37.678 -3.561 1.00 24.04 ? 11 G A "O3'" 1
ATOM 226 C "C2'" . G A 1 11 ? 14.455 -36.661 -1.826 1.00 22.40 ? 11 G A "C2'" 1
ATOM 227 O "O2'" . G A 1 11 ? 14.206 -37.797 -1.017 1.00 22.86 ? 11 G A "O2'" 1
ATOM 228 C "C1'" . G A 1 11 ? 15.942 -36.314 -1.833 1.00 21.22 ? 11 G A "C1'" 1
ATOM 229 N N9 . G A 1 11 ? 16.174 -34.879 -1.976 1.00 20.52 ? 11 G A N9 1
ATOM 230 C C8 . G A 1 11 ? 16.254 -34.165 -3.142 1.00 20.30 ? 11 G A C8 1
ATOM 231 N N7 . G A 1 11 ? 16.450 -32.886 -2.956 1.00 19.99 ? 11 G A N7 1
ATOM 232 C C5 . G A 1 11 ? 16.496 -32.740 -1.585 1.00 19.36 ? 11 G A C5 1
ATOM 233 C C6 . G A 1 11 ? 16.677 -31.578 -0.799 1.00 19.73 ? 11 G A C6 1
ATOM 234 O O6 . G A 1 11 ? 16.857 -30.402 -1.179 1.00 20.02 ? 11 G A O6 1
ATOM 235 N N1 . G A 1 11 ? 16.655 -31.862 0.565 1.00 18.79 ? 11 G A N1 1
ATOM 236 C C2 . G A 1 11 ? 16.473 -33.118 1.100 1.00 18.93 ? 11 G A C2 1
ATOM 237 N N2 . G A 1 11 ? 16.477 -33.205 2.439 1.00 17.21 ? 11 G A N2 1
ATOM 238 N N3 . G A 1 11 ? 16.301 -34.219 0.368 1.00 19.57 ? 11 G A N3 1
ATOM 239 C C4 . G A 1 11 ? 16.324 -33.955 -0.962 1.00 19.81 ? 11 G A C4 1
ATOM 240 P P . U A 1 12 ? 11.610 -36.942 -3.751 1.00 25.89 ? 12 U A P 1
ATOM 241 O OP1 . U A 1 12 ? 10.738 -37.840 -4.527 1.00 26.23 ? 12 U A OP1 1
ATOM 242 O OP2 . U A 1 12 ? 11.838 -35.569 -4.250 1.00 26.14 ? 12 U A OP2 1
ATOM 243 O "O5'" . U A 1 12 ? 11.076 -36.861 -2.240 1.00 27.89 ? 12 U A "O5'" 1
ATOM 244 C "C5'" . U A 1 12 ? 10.433 -35.679 -1.742 1.00 31.69 ? 12 U A "C5'" 1
ATOM 245 C "C4'" . U A 1 12 ? 10.936 -35.334 -0.340 1.00 34.30 ? 12 U A "C4'" 1
ATOM 246 O "O4'" . U A 1 12 ? 12.356 -34.996 -0.402 1.00 35.70 ? 12 U A "O4'" 1
ATOM 247 C "C3'" . U A 1 12 ? 10.252 -34.138 0.330 1.00 35.27 ? 12 U A "C3'" 1
ATOM 248 O "O3'" . U A 1 12 ? 9.190 -34.582 1.184 1.00 35.06 ? 12 U A "O3'" 1
ATOM 249 C "C2'" . U A 1 12 ? 11.394 -33.471 1.122 1.00 35.82 ? 12 U A "C2'" 1
ATOM 250 O "O2'" . U A 1 12 ? 11.596 -34.036 2.406 1.00 36.78 ? 12 U A "O2'" 1
ATOM 251 C "C1'" . U A 1 12 ? 12.608 -33.748 0.238 1.00 34.95 ? 12 U A "C1'" 1
ATOM 252 N N1 . U A 1 12 ? 12.878 -32.672 -0.811 1.00 33.61 ? 12 U A N1 1
ATOM 253 C C2 . U A 1 12 ? 13.217 -31.392 -0.401 1.00 33.15 ? 12 U A C2 1
ATOM 254 O O2 . U A 1 12 ? 13.308 -31.061 0.778 1.00 32.89 ? 12 U A O2 1
ATOM 255 N N3 . U A 1 12 ? 13.432 -30.504 -1.431 1.00 32.24 ? 12 U A N3 1
ATOM 256 C C4 . U A 1 12 ? 13.342 -30.765 -2.793 1.00 32.37 ? 12 U A C4 1
ATOM 257 O O4 . U A 1 12 ? 13.556 -29.870 -3.599 1.00 33.27 ? 12 U A O4 1
ATOM 258 C C5 . U A 1 12 ? 12.992 -32.114 -3.139 1.00 31.83 ? 12 U A C5 1
ATOM 259 C C6 . U A 1 12 ? 12.781 -32.992 -2.161 1.00 32.83 ? 12 U A C6 1
HETATM 260 K K . K B 2 . ? 18.312 -28.303 0.000 0.50 46.56 ? 21 K A K 1
HETATM 261 K K . K C 2 . ? 21.719 -28.303 0.000 0.50 40.69 ? 22 K A K 1
HETATM 262 C CAA . R14 D 3 . ? 26.351 -24.584 13.891 1.00 57.77 ? 30 R14 A CAA 1
HETATM 263 C CAB . R14 D 3 . ? 27.871 -20.382 13.393 1.00 55.11 ? 30 R14 A CAB 1
HETATM 264 C CAC . R14 D 3 . ? 31.048 -16.128 -17.788 1.00 72.78 ? 30 R14 A CAC 1
HETATM 265 C CAD . R14 D 3 . ? 30.826 -12.375 -15.954 1.00 72.59 ? 30 R14 A CAD 1
HETATM 266 O OAE . R14 D 3 . ? 25.691 -21.513 8.887 1.00 48.85 ? 30 R14 A OAE 1
HETATM 267 O OAF . R14 D 3 . ? 29.242 -14.849 -12.169 1.00 67.59 ? 30 R14 A OAF 1
HETATM 268 C CAG . R14 D 3 . ? 26.210 -20.972 5.098 1.00 38.34 ? 30 R14 A CAG 1
HETATM 269 C CAH . R14 D 3 . ? 27.387 -16.132 -8.837 1.00 58.91 ? 30 R14 A CAH 1
HETATM 270 C CAI . R14 D 3 . ? 26.354 -21.450 6.400 1.00 39.35 ? 30 R14 A CAI 1
HETATM 271 C CAJ . R14 D 3 . ? 27.870 -15.987 -10.147 1.00 60.11 ? 30 R14 A CAJ 1
HETATM 272 C CAK . R14 D 3 . ? 26.253 -21.858 4.025 1.00 36.97 ? 30 R14 A CAK 1
HETATM 273 C CAL . R14 D 3 . ? 27.167 -17.412 -8.303 1.00 57.68 ? 30 R14 A CAL 1
HETATM 274 C CAM . R14 D 3 . ? 26.422 -26.513 -0.475 1.00 27.48 ? 30 R14 A CAM 1
HETATM 275 C CAN . R14 D 3 . ? 26.791 -23.928 -7.157 1.00 40.18 ? 30 R14 A CAN 1
HETATM 276 C CAO . R14 D 3 . ? 26.428 -26.749 -1.841 1.00 28.98 ? 30 R14 A CAO 1
HETATM 277 C CAP . R14 D 3 . ? 26.679 -25.009 -6.305 1.00 38.04 ? 30 R14 A CAP 1
HETATM 278 C CAQ . R14 D 3 . ? 26.576 -23.695 5.556 1.00 38.50 ? 30 R14 A CAQ 1
HETATM 279 C CAR . R14 D 3 . ? 27.916 -18.382 -10.382 1.00 59.04 ? 30 R14 A CAR 1
HETATM 280 C CAS . R14 D 3 . ? 26.630 -24.152 -0.879 1.00 30.31 ? 30 R14 A CAS 1
HETATM 281 C CAT . R14 D 3 . ? 26.882 -22.427 -5.281 1.00 39.18 ? 30 R14 A CAT 1
HETATM 282 C CAU . R14 D 3 . ? 26.554 -25.906 -4.086 1.00 33.42 ? 30 R14 A CAU 1
HETATM 283 C CAV . R14 D 3 . ? 26.422 -23.815 1.923 1.00 29.89 ? 30 R14 A CAV 1
HETATM 284 C CAW . R14 D 3 . ? 27.232 -20.328 -7.377 1.00 51.37 ? 30 R14 A CAW 1
HETATM 285 C CAX . R14 D 3 . ? 27.293 -23.836 12.921 1.00 57.62 ? 30 R14 A CAX 1
HETATM 286 C CAY . R14 D 3 . ? 27.906 -21.533 12.385 1.00 55.66 ? 30 R14 A CAY 1
HETATM 287 C CAZ . R14 D 3 . ? 31.938 -15.675 -16.618 1.00 72.68 ? 30 R14 A CAZ 1
HETATM 288 C CBA . R14 D 3 . ? 31.813 -13.490 -15.575 1.00 72.91 ? 30 R14 A CBA 1
HETATM 289 C CBB . R14 D 3 . ? 26.471 -23.303 10.296 1.00 50.30 ? 30 R14 A CBB 1
HETATM 290 C CBC . R14 D 3 . ? 29.699 -16.132 -14.170 1.00 68.54 ? 30 R14 A CBC 1
HETATM 291 C CBD . R14 D 3 . ? 25.867 -22.480 11.457 1.00 53.45 ? 30 R14 A CBD 1
HETATM 292 C CBE . R14 D 3 . ? 31.076 -15.456 -14.359 1.00 70.96 ? 30 R14 A CBE 1
HETATM 293 N NBF . R14 D 3 . ? 26.650 -25.414 3.280 1.00 31.59 ? 30 R14 A NBF 1
HETATM 294 N NBG . R14 D 3 . ? 27.002 -20.872 -9.419 1.00 53.86 ? 30 R14 A NBG 1
HETATM 295 N NBH . R14 D 3 . ? 26.661 -25.883 2.132 1.00 30.26 ? 30 R14 A NBH 1
HETATM 296 N NBI . R14 D 3 . ? 26.873 -21.893 -8.743 1.00 52.14 ? 30 R14 A NBI 1
HETATM 297 N NBJ . R14 D 3 . ? 26.752 -23.338 -3.089 1.00 33.51 ? 30 R14 A NBJ 1
HETATM 298 N NBK . R14 D 3 . ? 26.683 -23.284 7.884 1.00 45.16 ? 30 R14 A NBK 1
HETATM 299 N NBL . R14 D 3 . ? 28.617 -17.050 -12.192 1.00 64.33 ? 30 R14 A NBL 1
HETATM 300 C CBM . R14 D 3 . ? 26.238 -22.612 8.947 1.00 48.30 ? 30 R14 A CBM 1
HETATM 301 C CBN . R14 D 3 . ? 29.168 -15.946 -12.732 1.00 66.97 ? 30 R14 A CBN 1
HETATM 302 C CBO . R14 D 3 . ? 26.538 -22.810 6.634 1.00 41.12 ? 30 R14 A CBO 1
HETATM 303 C CBP . R14 D 3 . ? 28.138 -17.124 -10.925 1.00 61.16 ? 30 R14 A CBP 1
HETATM 304 C CBQ . R14 D 3 . ? 26.430 -23.221 4.258 1.00 35.28 ? 30 R14 A CBQ 1
HETATM 305 C CBR . R14 D 3 . ? 27.441 -18.539 -9.080 1.00 56.51 ? 30 R14 A CBR 1
HETATM 306 C CBS . R14 D 3 . ? 26.516 -25.214 0.003 1.00 28.59 ? 30 R14 A CBS 1
HETATM 307 C CBT . R14 D 3 . ? 26.892 -22.637 -6.656 1.00 42.73 ? 30 R14 A CBT 1
HETATM 308 C CBU . R14 D 3 . ? 26.488 -24.104 3.199 1.00 32.27 ? 30 R14 A CBU 1
HETATM 309 C CBV . R14 D 3 . ? 27.230 -19.843 -8.620 1.00 54.10 ? 30 R14 A CBV 1
HETATM 310 C CBW . R14 D 3 . ? 26.541 -25.684 -2.723 1.00 31.43 ? 30 R14 A CBW 1
HETATM 311 C CBX . R14 D 3 . ? 26.661 -24.813 -4.937 1.00 35.68 ? 30 R14 A CBX 1
HETATM 312 C CBY . R14 D 3 . ? 26.642 -24.381 -2.242 1.00 31.94 ? 30 R14 A CBY 1
HETATM 313 C CBZ . R14 D 3 . ? 26.762 -23.525 -4.418 1.00 35.67 ? 30 R14 A CBZ 1
HETATM 314 N NCA . R14 D 3 . ? 26.776 -22.464 12.631 1.00 55.86 ? 30 R14 A NCA 1
HETATM 315 N NCB . R14 D 3 . ? 31.156 -14.815 -15.696 1.00 72.68 ? 30 R14 A NCB 1
HETATM 316 N NCC . R14 D 3 . ? 26.520 -24.978 1.304 1.00 28.98 ? 30 R14 A NCC 1
HETATM 317 N NCD . R14 D 3 . ? 26.996 -21.639 -7.539 1.00 48.54 ? 30 R14 A NCD 1
HETATM 318 O O . HOH E 4 . ? 18.875 -19.886 0.082 1.00 14.77 ? 41 HOH A O 1
HETATM 319 O O . HOH E 4 . ? 22.717 -33.647 -11.695 1.00 34.60 ? 42 HOH A O 1
HETATM 320 O O . HOH E 4 . ? 23.284 -20.303 2.914 1.00 12.31 ? 43 HOH A O 1
HETATM 321 O O . HOH E 4 . ? 23.890 -25.760 -8.168 1.00 28.46 ? 44 HOH A O 1
HETATM 322 O O . HOH E 4 . ? 26.801 -26.177 8.524 1.00 40.93 ? 45 HOH A O 1
HETATM 323 O O . HOH E 4 . ? 14.487 -30.042 -9.434 1.00 13.48 ? 46 HOH A O 1
HETATM 324 O O . HOH E 4 . ? 16.963 -15.759 -1.656 1.00 39.00 ? 47 HOH A O 1
HETATM 325 O O . HOH E 4 . ? 28.832 -25.269 10.352 1.00 39.36 ? 48 HOH A O 1
HETATM 326 O O . HOH E 4 . ? 25.271 -18.666 2.089 1.00 43.72 ? 49 HOH A O 1
HETATM 327 O O . HOH E 4 . ? 21.340 -25.341 -8.156 1.00 23.95 ? 50 HOH A O 1
HETATM 328 O O . HOH E 4 . ? 13.520 -23.208 -5.463 1.00 12.93 ? 51 HOH A O 1
HETATM 329 O O . HOH E 4 . ? 12.339 -27.377 -4.798 1.00 51.43 ? 52 HOH A O 1
HETATM 330 O O . HOH E 4 . ? 14.003 -36.809 1.549 1.00 17.26 ? 53 HOH A O 1
HETATM 331 O O . HOH E 4 . ? 27.409 -27.752 5.058 0.50 19.58 ? 54 HOH A O 1
HETATM 332 O O . HOH E 4 . ? 28.638 -11.844 9.437 1.00 4.43 ? 55 HOH A O 1
HETATM 333 O O . HOH E 4 . ? 29.768 -21.101 0.397 1.00 43.14 ? 56 HOH A O 1
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 U 1 1 1 U U A . n
A 1 2 A 2 2 2 A A A . n
A 1 3 G 3 3 3 G G A . n
A 1 4 G 4 4 4 G G A . n
A 1 5 G 5 5 5 G G A . n
A 1 6 U 6 6 6 U U A . n
A 1 7 U 7 7 7 U U A . n
A 1 8 A 8 8 8 A A A . n
A 1 9 G 9 9 9 G G A . n
A 1 10 G 10 10 10 G G A . n
A 1 11 G 11 11 11 G G A . n
A 1 12 U 12 12 12 U U A . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 K 1 21 21 K K A .
C 2 K 1 22 22 K K A .
D 3 R14 1 30 30 R14 R14 A .
E 4 HOH 1 41 41 HOH HOH A .
E 4 HOH 2 42 42 HOH HOH A .
E 4 HOH 3 43 43 HOH HOH A .
E 4 HOH 4 44 44 HOH HOH A .
E 4 HOH 5 45 45 HOH HOH A .
E 4 HOH 6 46 46 HOH HOH A .
E 4 HOH 7 47 47 HOH HOH A .
E 4 HOH 8 48 48 HOH HOH A .
E 4 HOH 9 49 49 HOH HOH A .
E 4 HOH 10 50 50 HOH HOH A .
E 4 HOH 11 51 51 HOH HOH A .
E 4 HOH 12 52 52 HOH HOH A .
E 4 HOH 13 53 53 HOH HOH A .
E 4 HOH 14 54 54 HOH HOH A .
E 4 HOH 15 55 55 HOH HOH A .
E 4 HOH 16 56 56 HOH HOH A .
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_and_software_defined_assembly
_pdbx_struct_assembly.method_details PISA
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1,2
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E
#
loop_
_pdbx_struct_assembly_prop.biol_id
_pdbx_struct_assembly_prop.type
_pdbx_struct_assembly_prop.value
_pdbx_struct_assembly_prop.details
1 'ABSA (A^2)' 2230 ?
1 MORE -17 ?
1 'SSA (A^2)' 4880 ?
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 4_545 x,-y-1,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000
0.0000000000 -56.6060000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
#
loop_
_pdbx_struct_special_symmetry.id
_pdbx_struct_special_symmetry.PDB_model_num
_pdbx_struct_special_symmetry.auth_asym_id
_pdbx_struct_special_symmetry.auth_comp_id
_pdbx_struct_special_symmetry.auth_seq_id
_pdbx_struct_special_symmetry.PDB_ins_code
_pdbx_struct_special_symmetry.label_asym_id
_pdbx_struct_special_symmetry.label_comp_id
_pdbx_struct_special_symmetry.label_seq_id
1 1 A K 21 ? B K .
2 1 A K 22 ? C K .
#
loop_
_pdbx_struct_conn_angle.id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_alt_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_auth_atom_id
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_alt_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr2_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_atom_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code
_pdbx_struct_conn_angle.ptnr2_symmetry
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_alt_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_atom_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_pdbx_struct_conn_angle.value_esd
1 O6 ? A G 3 ? A G 3 ? 1_555 K ? C K . ? A K 22 ? 1_555 O6 ? A G 4 ? A G 4 ? 1_555 73.8 ?
2 O6 ? A G 3 ? A G 3 ? 1_555 K ? C K . ? A K 22 ? 1_555 O6 ? A G 9 ? A G 9 ? 1_555 81.0 ?
3 O6 ? A G 4 ? A G 4 ? 1_555 K ? C K . ? A K 22 ? 1_555 O6 ? A G 9 ? A G 9 ? 1_555 87.3 ?
4 O6 ? A G 3 ? A G 3 ? 1_555 K ? C K . ? A K 22 ? 1_555 O6 ? A G 10 ? A G 10 ? 1_555 135.5 ?
5 O6 ? A G 4 ? A G 4 ? 1_555 K ? C K . ? A K 22 ? 1_555 O6 ? A G 10 ? A G 10 ? 1_555 66.9 ?
6 O6 ? A G 9 ? A G 9 ? 1_555 K ? C K . ? A K 22 ? 1_555 O6 ? A G 10 ? A G 10 ? 1_555 77.3 ?
7 O6 ? A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 21 ? 1_555 O6 ? A G 5 ? A G 5 ? 1_555 63.3 ?
8 O6 ? A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 21 ? 1_555 O6 ? A G 10 ? A G 10 ? 1_555 78.8 ?
9 O6 ? A G 5 ? A G 5 ? 1_555 K ? B K . ? A K 21 ? 1_555 O6 ? A G 10 ? A G 10 ? 1_555 97.9 ?
10 O6 ? A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 21 ? 1_555 O6 ? A G 11 ? A G 11 ? 1_555 120.0 ?
11 O6 ? A G 5 ? A G 5 ? 1_555 K ? B K . ? A K 21 ? 1_555 O6 ? A G 11 ? A G 11 ? 1_555 74.6 ?
12 O6 ? A G 10 ? A G 10 ? 1_555 K ? B K . ? A K 21 ? 1_555 O6 ? A G 11 ? A G 11 ? 1_555 66.4 ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2011-02-16
2 'Structure model' 1 1 2011-07-13
3 'Structure model' 1 2 2023-09-06
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Data collection'
3 3 'Structure model' 'Database references'
4 3 'Structure model' 'Derived calculations'
5 3 'Structure model' 'Refinement description'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 3 'Structure model' chem_comp_atom
2 3 'Structure model' chem_comp_bond
3 3 'Structure model' database_2
4 3 'Structure model' pdbx_initial_refinement_model
5 3 'Structure model' pdbx_struct_conn_angle
6 3 'Structure model' struct_conn
7 3 'Structure model' struct_site
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 3 'Structure model' '_database_2.pdbx_DOI'
2 3 'Structure model' '_database_2.pdbx_database_accession'
3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id'
4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id'
5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id'
6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id'
7 3 'Structure model' '_pdbx_struct_conn_angle.value'
8 3 'Structure model' '_struct_conn.pdbx_dist_value'
9 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id'
10 3 'Structure model' '_struct_conn.ptnr1_label_seq_id'
11 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id'
12 3 'Structure model' '_struct_conn.ptnr2_label_asym_id'
13 3 'Structure model' '_struct_site.pdbx_auth_asym_id'
14 3 'Structure model' '_struct_site.pdbx_auth_comp_id'
15 3 'Structure model' '_struct_site.pdbx_auth_seq_id'
#
loop_
_pdbx_refine_tls.pdbx_refine_id
_pdbx_refine_tls.id
_pdbx_refine_tls.details
_pdbx_refine_tls.method
_pdbx_refine_tls.origin_x
_pdbx_refine_tls.origin_y
_pdbx_refine_tls.origin_z
_pdbx_refine_tls.T[1][1]
_pdbx_refine_tls.T[2][2]
_pdbx_refine_tls.T[3][3]
_pdbx_refine_tls.T[1][2]
_pdbx_refine_tls.T[1][3]
_pdbx_refine_tls.T[2][3]
_pdbx_refine_tls.L[1][1]
_pdbx_refine_tls.L[2][2]
_pdbx_refine_tls.L[3][3]
_pdbx_refine_tls.L[1][2]
_pdbx_refine_tls.L[1][3]
_pdbx_refine_tls.L[2][3]
_pdbx_refine_tls.S[1][1]
_pdbx_refine_tls.S[2][2]
_pdbx_refine_tls.S[3][3]
_pdbx_refine_tls.S[1][2]
_pdbx_refine_tls.S[1][3]
_pdbx_refine_tls.S[2][3]
_pdbx_refine_tls.S[2][1]
_pdbx_refine_tls.S[3][1]
_pdbx_refine_tls.S[3][2]
'X-RAY DIFFRACTION' 1 ? refined 19.9659 -21.4686 -2.7363 0.1264 0.1472 0.2204 0.0291 0.0452 0.0420 6.8194 5.0378 2.5129 -1.0818
-0.7852 -3.3089 -0.1504 -0.1088 0.2592 -0.0514 0.3473 0.1893 -0.0798 -0.4133 0.0868
'X-RAY DIFFRACTION' 2 ? refined 19.1291 -29.4003 -6.8385 0.1336 0.1870 0.1853 0.0498 -0.0186 -0.0234 7.8860 5.3643 5.8467 1.0090
0.5586 4.0655 0.0286 0.4676 -0.4961 0.4748 0.4414 0.6362 -0.0921 -0.1051 -0.5266
#
loop_
_pdbx_refine_tls_group.pdbx_refine_id
_pdbx_refine_tls_group.id
_pdbx_refine_tls_group.refine_tls_id
_pdbx_refine_tls_group.beg_auth_asym_id
_pdbx_refine_tls_group.beg_auth_seq_id
_pdbx_refine_tls_group.end_auth_asym_id
_pdbx_refine_tls_group.end_auth_seq_id
_pdbx_refine_tls_group.selection_details
_pdbx_refine_tls_group.beg_label_asym_id
_pdbx_refine_tls_group.beg_label_seq_id
_pdbx_refine_tls_group.end_label_asym_id
_pdbx_refine_tls_group.end_label_seq_id
_pdbx_refine_tls_group.selection
'X-RAY DIFFRACTION' 1 1 A 1 A 6 ? . . . . ?
'X-RAY DIFFRACTION' 2 2 A 7 A 12 ? . . . . ?
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
DNA 'data collection' . ? 1
PHASER phasing . ? 2
REFMAC refinement 5.5.0072 ? 3
CrystalClear 'data reduction' . ? 4
CrystalClear 'data scaling' . ? 5
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
A OP3 O N N 1
A P P N N 2
A OP1 O N N 3
A OP2 O N N 4
A "O5'" O N N 5
A "C5'" C N N 6
A "C4'" C N R 7
A "O4'" O N N 8
A "C3'" C N S 9
A "O3'" O N N 10
A "C2'" C N R 11
A "O2'" O N N 12
A "C1'" C N R 13
A N9 N Y N 14
A C8 C Y N 15
A N7 N Y N 16
A C5 C Y N 17
A C6 C Y N 18
A N6 N N N 19
A N1 N Y N 20
A C2 C Y N 21
A N3 N Y N 22
A C4 C Y N 23
A HOP3 H N N 24
A HOP2 H N N 25
A "H5'" H N N 26
A "H5''" H N N 27
A "H4'" H N N 28
A "H3'" H N N 29
A "HO3'" H N N 30
A "H2'" H N N 31
A "HO2'" H N N 32
A "H1'" H N N 33
A H8 H N N 34
A H61 H N N 35
A H62 H N N 36
A H2 H N N 37
G OP3 O N N 38
G P P N N 39
G OP1 O N N 40
G OP2 O N N 41
G "O5'" O N N 42
G "C5'" C N N 43
G "C4'" C N R 44
G "O4'" O N N 45
G "C3'" C N S 46
G "O3'" O N N 47
G "C2'" C N R 48
G "O2'" O N N 49
G "C1'" C N R 50
G N9 N Y N 51
G C8 C Y N 52
G N7 N Y N 53
G C5 C Y N 54
G C6 C N N 55
G O6 O N N 56
G N1 N N N 57
G C2 C N N 58
G N2 N N N 59
G N3 N N N 60
G C4 C Y N 61
G HOP3 H N N 62
G HOP2 H N N 63
G "H5'" H N N 64
G "H5''" H N N 65
G "H4'" H N N 66
G "H3'" H N N 67
G "HO3'" H N N 68
G "H2'" H N N 69
G "HO2'" H N N 70
G "H1'" H N N 71
G H8 H N N 72
G H1 H N N 73
G H21 H N N 74
G H22 H N N 75
HOH O O N N 76
HOH H1 H N N 77
HOH H2 H N N 78
K K K N N 79
R14 CAA C N N 80
R14 CAB C N N 81
R14 CAC C N N 82
R14 CAD C N N 83
R14 OAE O N N 84
R14 OAF O N N 85
R14 CAG C Y N 86
R14 CAH C Y N 87
R14 CAI C Y N 88
R14 CAJ C Y N 89
R14 CAK C Y N 90
R14 CAL C Y N 91
R14 CAM C Y N 92
R14 CAN C Y N 93
R14 CAO C Y N 94
R14 CAP C Y N 95
R14 CAQ C Y N 96
R14 CAR C Y N 97
R14 CAS C Y N 98
R14 CAT C Y N 99
R14 CAU C Y N 100
R14 CAV C Y N 101
R14 CAW C Y N 102
R14 CAX C N N 103
R14 CAY C N N 104
R14 CAZ C N N 105
R14 CBA C N N 106
R14 CBB C N N 107
R14 CBC C N N 108
R14 CBD C N N 109
R14 CBE C N N 110
R14 NBF N Y N 111
R14 NBG N Y N 112
R14 NBH N Y N 113
R14 NBI N Y N 114
R14 NBJ N Y N 115
R14 NBK N N N 116
R14 NBL N N N 117
R14 CBM C N N 118
R14 CBN C N N 119
R14 CBO C Y N 120
R14 CBP C Y N 121
R14 CBQ C Y N 122
R14 CBR C Y N 123
R14 CBS C Y N 124
R14 CBT C Y N 125
R14 CBU C Y N 126
R14 CBV C Y N 127
R14 CBW C Y N 128
R14 CBX C Y N 129
R14 CBY C Y N 130
R14 CBZ C Y N 131
R14 NCA N N N 132
R14 NCB N N N 133
R14 NCC N Y N 134
R14 NCD N Y N 135
R14 HAA H N N 136
R14 HAAA H N N 137
R14 HAAB H N N 138
R14 HAB H N N 139
R14 HABA H N N 140
R14 HABB H N N 141
R14 HAC H N N 142
R14 HACA H N N 143
R14 HACB H N N 144
R14 HAD H N N 145
R14 HADA H N N 146
R14 HADB H N N 147
R14 HAG H N N 148
R14 HAH H N N 149
R14 HAI H N N 150
R14 HAJ H N N 151
R14 HAK H N N 152
R14 HAL H N N 153
R14 HAM H N N 154
R14 HAN H N N 155
R14 HAO H N N 156
R14 HAP H N N 157
R14 HAQ H N N 158
R14 HAR H N N 159
R14 HAS H N N 160
R14 HAT H N N 161
R14 HAU H N N 162
R14 HAV H N N 163
R14 HAW H N N 164
R14 HAX H N N 165
R14 HAXA H N N 166
R14 HAY H N N 167
R14 HAYA H N N 168
R14 HAZ H N N 169
R14 HAZA H N N 170
R14 HBA H N N 171
R14 HBAA H N N 172
R14 HBB H N N 173
R14 HBBA H N N 174
R14 HBC H N N 175
R14 HBCA H N N 176
R14 HBD H N N 177
R14 HBDA H N N 178
R14 HBE H N N 179
R14 HBEA H N N 180
R14 HNBK H N N 181
R14 HNBL H N N 182
U OP3 O N N 183
U P P N N 184
U OP1 O N N 185
U OP2 O N N 186
U "O5'" O N N 187
U "C5'" C N N 188
U "C4'" C N R 189
U "O4'" O N N 190
U "C3'" C N S 191
U "O3'" O N N 192
U "C2'" C N R 193
U "O2'" O N N 194
U "C1'" C N R 195
U N1 N N N 196
U C2 C N N 197
U O2 O N N 198
U N3 N N N 199
U C4 C N N 200
U O4 O N N 201
U C5 C N N 202
U C6 C N N 203
U HOP3 H N N 204
U HOP2 H N N 205
U "H5'" H N N 206
U "H5''" H N N 207
U "H4'" H N N 208
U "H3'" H N N 209
U "HO3'" H N N 210
U "H2'" H N N 211
U "HO2'" H N N 212
U "H1'" H N N 213
U H3 H N N 214
U H5 H N N 215
U H6 H N N 216
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
A OP3 P sing N N 1
A OP3 HOP3 sing N N 2
A P OP1 doub N N 3
A P OP2 sing N N 4
A P "O5'" sing N N 5
A OP2 HOP2 sing N N 6
A "O5'" "C5'" sing N N 7
A "C5'" "C4'" sing N N 8
A "C5'" "H5'" sing N N 9
A "C5'" "H5''" sing N N 10
A "C4'" "O4'" sing N N 11
A "C4'" "C3'" sing N N 12
A "C4'" "H4'" sing N N 13
A "O4'" "C1'" sing N N 14
A "C3'" "O3'" sing N N 15
A "C3'" "C2'" sing N N 16
A "C3'" "H3'" sing N N 17
A "O3'" "HO3'" sing N N 18
A "C2'" "O2'" sing N N 19
A "C2'" "C1'" sing N N 20
A "C2'" "H2'" sing N N 21
A "O2'" "HO2'" sing N N 22
A "C1'" N9 sing N N 23
A "C1'" "H1'" sing N N 24
A N9 C8 sing Y N 25
A N9 C4 sing Y N 26
A C8 N7 doub Y N 27
A C8 H8 sing N N 28
A N7 C5 sing Y N 29
A C5 C6 sing Y N 30
A C5 C4 doub Y N 31
A C6 N6 sing N N 32
A C6 N1 doub Y N 33
A N6 H61 sing N N 34
A N6 H62 sing N N 35
A N1 C2 sing Y N 36
A C2 N3 doub Y N 37
A C2 H2 sing N N 38
A N3 C4 sing Y N 39
G OP3 P sing N N 40
G OP3 HOP3 sing N N 41
G P OP1 doub N N 42
G P OP2 sing N N 43
G P "O5'" sing N N 44
G OP2 HOP2 sing N N 45
G "O5'" "C5'" sing N N 46
G "C5'" "C4'" sing N N 47
G "C5'" "H5'" sing N N 48
G "C5'" "H5''" sing N N 49
G "C4'" "O4'" sing N N 50
G "C4'" "C3'" sing N N 51
G "C4'" "H4'" sing N N 52
G "O4'" "C1'" sing N N 53
G "C3'" "O3'" sing N N 54
G "C3'" "C2'" sing N N 55
G "C3'" "H3'" sing N N 56
G "O3'" "HO3'" sing N N 57
G "C2'" "O2'" sing N N 58
G "C2'" "C1'" sing N N 59
G "C2'" "H2'" sing N N 60
G "O2'" "HO2'" sing N N 61
G "C1'" N9 sing N N 62
G "C1'" "H1'" sing N N 63
G N9 C8 sing Y N 64
G N9 C4 sing Y N 65
G C8 N7 doub Y N 66
G C8 H8 sing N N 67
G N7 C5 sing Y N 68
G C5 C6 sing N N 69
G C5 C4 doub Y N 70
G C6 O6 doub N N 71
G C6 N1 sing N N 72
G N1 C2 sing N N 73
G N1 H1 sing N N 74
G C2 N2 sing N N 75
G C2 N3 doub N N 76
G N2 H21 sing N N 77
G N2 H22 sing N N 78
G N3 C4 sing N N 79
HOH O H1 sing N N 80
HOH O H2 sing N N 81
R14 CAX CAA sing N N 82
R14 CAA HAA sing N N 83
R14 CAA HAAA sing N N 84
R14 CAA HAAB sing N N 85
R14 CAY CAB sing N N 86
R14 CAB HAB sing N N 87
R14 CAB HABA sing N N 88
R14 CAB HABB sing N N 89
R14 CAC CAZ sing N N 90
R14 CAC HAC sing N N 91
R14 CAC HACA sing N N 92
R14 CAC HACB sing N N 93
R14 CAD CBA sing N N 94
R14 CAD HAD sing N N 95
R14 CAD HADA sing N N 96
R14 CAD HADB sing N N 97
R14 OAE CBM doub N N 98
R14 CBN OAF doub N N 99
R14 CAK CAG doub Y N 100
R14 CAG CAI sing Y N 101
R14 CAG HAG sing N N 102
R14 CAJ CAH doub Y N 103
R14 CAH CAL sing Y N 104
R14 CAH HAH sing N N 105
R14 CAI CBO doub Y N 106
R14 CAI HAI sing N N 107
R14 CBP CAJ sing Y N 108
R14 CAJ HAJ sing N N 109
R14 CAK CBQ sing Y N 110
R14 CAK HAK sing N N 111
R14 CBR CAL doub Y N 112
R14 CAL HAL sing N N 113
R14 CAO CAM doub Y N 114
R14 CAM CBS sing Y N 115
R14 CAM HAM sing N N 116
R14 CAN CBT doub Y N 117
R14 CAN CAP sing Y N 118
R14 CAN HAN sing N N 119
R14 CBW CAO sing Y N 120
R14 CAO HAO sing N N 121
R14 CAP CBX doub Y N 122
R14 CAP HAP sing N N 123
R14 CBQ CAQ doub Y N 124
R14 CAQ CBO sing Y N 125
R14 CAQ HAQ sing N N 126
R14 CBP CAR doub Y N 127
R14 CAR CBR sing Y N 128
R14 CAR HAR sing N N 129
R14 CBY CAS sing Y N 130
R14 CAS CBS doub Y N 131
R14 CAS HAS sing N N 132
R14 CBT CAT sing Y N 133
R14 CAT CBZ doub Y N 134
R14 CAT HAT sing N N 135
R14 CBX CAU sing Y N 136
R14 CAU CBW doub Y N 137
R14 CAU HAU sing N N 138
R14 NCC CAV sing Y N 139
R14 CAV CBU doub Y N 140
R14 CAV HAV sing N N 141
R14 CBV CAW doub Y N 142
R14 NCD CAW sing Y N 143
R14 CAW HAW sing N N 144
R14 NCA CAX sing N N 145
R14 CAX HAX sing N N 146
R14 CAX HAXA sing N N 147
R14 CAY NCA sing N N 148
R14 CAY HAY sing N N 149
R14 CAY HAYA sing N N 150
R14 CAZ NCB sing N N 151
R14 CAZ HAZ sing N N 152
R14 CAZ HAZA sing N N 153
R14 NCB CBA sing N N 154
R14 CBA HBA sing N N 155
R14 CBA HBAA sing N N 156
R14 CBM CBB sing N N 157
R14 CBB CBD sing N N 158
R14 CBB HBB sing N N 159
R14 CBB HBBA sing N N 160
R14 CBE CBC sing N N 161
R14 CBC CBN sing N N 162
R14 CBC HBC sing N N 163
R14 CBC HBCA sing N N 164
R14 CBD NCA sing N N 165
R14 CBD HBD sing N N 166
R14 CBD HBDA sing N N 167
R14 NCB CBE sing N N 168
R14 CBE HBE sing N N 169
R14 CBE HBEA sing N N 170
R14 NBH NBF doub Y N 171
R14 CBU NBF sing Y N 172
R14 NBG NBI doub Y N 173
R14 NBG CBV sing Y N 174
R14 NCC NBH sing Y N 175
R14 NBI NCD sing Y N 176
R14 CBZ NBJ sing Y N 177
R14 NBJ CBY doub Y N 178
R14 CBO NBK sing N N 179
R14 NBK CBM sing N N 180
R14 NBK HNBK sing N N 181
R14 CBN NBL sing N N 182
R14 NBL CBP sing N N 183
R14 NBL HNBL sing N N 184
R14 CBU CBQ sing Y N 185
R14 CBR CBV sing Y N 186
R14 CBS NCC sing Y N 187
R14 NCD CBT sing Y N 188
R14 CBW CBY sing Y N 189
R14 CBX CBZ sing Y N 190
U OP3 P sing N N 191
U OP3 HOP3 sing N N 192
U P OP1 doub N N 193
U P OP2 sing N N 194
U P "O5'" sing N N 195
U OP2 HOP2 sing N N 196
U "O5'" "C5'" sing N N 197
U "C5'" "C4'" sing N N 198
U "C5'" "H5'" sing N N 199
U "C5'" "H5''" sing N N 200
U "C4'" "O4'" sing N N 201
U "C4'" "C3'" sing N N 202
U "C4'" "H4'" sing N N 203
U "O4'" "C1'" sing N N 204
U "C3'" "O3'" sing N N 205
U "C3'" "C2'" sing N N 206
U "C3'" "H3'" sing N N 207
U "O3'" "HO3'" sing N N 208
U "C2'" "O2'" sing N N 209
U "C2'" "C1'" sing N N 210
U "C2'" "H2'" sing N N 211
U "O2'" "HO2'" sing N N 212
U "C1'" N1 sing N N 213
U "C1'" "H1'" sing N N 214
U N1 C2 sing N N 215
U N1 C6 sing N N 216
U C2 O2 doub N N 217
U C2 N3 sing N N 218
U N3 C4 sing N N 219
U N3 H3 sing N N 220
U C4 O4 doub N N 221
U C4 C5 sing N N 222
U C5 C6 doub N N 223
U C5 H5 sing N N 224
U C6 H6 sing N N 225
#
loop_
_ndb_struct_conf_na.entry_id
_ndb_struct_conf_na.feature
3MIJ 'double helix'
3MIJ 'parallel strands'
3MIJ 'mismatched base pair'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A G 3 1_555 A G 9 1_555 1.799 3.439 0.266 -7.931 2.474 -88.368 1 A_G3:G9_A A 3 ? A 9 ? 6 3
1 A G 4 1_555 A G 10 1_555 1.653 3.863 0.510 -8.953 -0.269 -87.937 2 A_G4:G10_A A 4 ? A 10 ? 6 3
1 A G 5 1_555 A G 11 1_555 1.793 3.246 -0.011 6.900 -9.546 -92.780 3 A_G5:G11_A A 5 ? A 11 ? 6 3
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A G 3 1_555 A G 9 1_555 A G 4 1_555 A G 10 1_555 -0.427 -1.320 3.171 2.164 -0.788 30.571 -2.346 1.220 3.166 -1.492 -4.097
30.656 1 AA_G3G4:G10G9_AA A 3 ? A 9 ? A 4 ? A 10 ?
1 A G 4 1_555 A G 10 1_555 A G 5 1_555 A G 11 1_555 -0.321 -0.862 2.901 8.836 4.613 26.731 -2.648 2.372 2.490 9.565 -18.321
28.497 2 AA_G4G5:G11G10_AA A 4 ? A 10 ? A 5 ? A 11 ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2 'POTASSIUM ION' K
3 "N,N'-[acridine-3,6-diylbis(1H-1,2,3-triazole-1,4-diylbenzene-3,1-diyl)]bis[3-(diethylamino)propanamide]" R14
4 water HOH
#
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'experimental model'
_pdbx_initial_refinement_model.source_name PDB
_pdbx_initial_refinement_model.accession_code 3IBK
_pdbx_initial_refinement_model.details 'PDB ID 3IBK'
#